mouse gut metagenome
collection_date
2012-10-08
env_biome
intestine environment (ENVO:2100002)
env_feature
mammalia-associated habitat (ENVO:00009002)
env_material
feces (ENVO:00002003)
geo_loc_name
Switzerland:Canton of Zurich,Zurich
host
Mus musculus
lat_lon
47.22 N 8.33 E
target_gene
16S rRNA
target_subfragment
V1-V2
pcr_primers
FWD:CTATGCGCCTTGCCAGCCCGCTCAGTCAGAGTTTGATCCTGGCTCAG REV:CGTATCGCCTCCCTCGCGCCATCAGXXXXXXXXXXCATGCTGCCTCCCGTAGGAGT
mid
CGATCGTATA
seq_meth
GS-FLX 454 Pyrosequencing
chem_administration
none
host_sex
female
host_subject_id
19
host_taxid
10090
host_tissue_sampled
feces
isolation_source
mouse feces
misc_param
dosage:0
perturbation
none (prior to treatment)
BioSampleModel
MIMS.me
BioSampleModel
MIGS/MIMS/MIMARKS.host-associated