preterm stool
gut metagenome
ENA-FIRST-PUBLIC
2020-11-23T04:06:22Z
ENA-LAST-UPDATE
2020-07-29T12:49:12Z
External Id
SAMEA7097332
INSDC center name
NEWCASTLE UNIVERSITY, UK
INSDC first public
2020-11-23T04:06:22Z
INSDC last update
2020-07-29T12:49:12Z
INSDC status
public
Submitter Id
NEW2065.S67.L003
antibiotics admin
0(P2G2) 8(Taz5) 30(V2Mero7) 52 (Mero5 V5 ) 61 (V2)
antibiotics summary
Not_during
birthweight
740
blood culture
Yes
breast milk feeding
During
collection date
2016
day of life at blood culture
30
day of life at sample collection
7
deliverymode
Vaginal
dirichlet multinomial mixtures cluster
1
dslnt_threshold
Below
environment (biome)
human
environment (feature)
intestine
environment (material)
faecal
formula feeding
Never
geographic location (country and/or sea)
United Kingdom
geographic location (latitude)
54.9783
geographic location (longitude)
1.6178
gestational age
24
host subject
506
human gut environmental package
human-gut
investigation type
metagenome
mother breast milk secretor status
NonSecretor
nec
Y
nec day onset
52
nec details
NBM 5 days, fully fed again 11 days after beginning episode
nec medical or surgical
Medical
organism blood culture
E Coli
prelos
PreLOS
prenec
PreNEC
probiotics administration
During
project name
ena-STUDY-NEWCASTLE UNIVERSITY, UK-29-07-2020-07:51:53:774-2055
reads
22069125
sample name
NEW2065.S67.L003
sampleno
MG/A007/101
scientific_name
gut metagenome
sequencing method
Illumina (Solexa) sequencing
sex
male