preterm stool
gut metagenome
ENA-FIRST-PUBLIC
2020-11-23T04:06:22Z
ENA-LAST-UPDATE
2020-07-29T12:49:11Z
External Id
SAMEA7097233
INSDC center name
NEWCASTLE UNIVERSITY, UK
INSDC first public
2020-11-23T04:06:22Z
INSDC last update
2020-07-29T12:49:11Z
INSDC status
public
Submitter Id
NEW1046.S158.L005
antibiotics admin
0(P2G2) 14(C5V5M5) 53(A2F2G2)
antibiotics summary
Not_during
birthweight
700
blood culture
No
breast milk feeding
During
collection date
2015
day of life at sample collection
57
deliverymode
Caesarian
dirichlet multinomial mixtures cluster
2
dslnt_threshold
Below
environment (biome)
human
environment (feature)
intestine
environment (material)
faecal
formula feeding
During
geographic location (country and/or sea)
United Kingdom
geographic location (latitude)
54.9783
geographic location (longitude)
1.6178
gestational age
25
host subject
393
human gut environmental package
human-gut
investigation type
metagenome
mother breast milk secretor status
Secretor
nec
Y
nec day onset
14
nec details
conservatively treated NEC - blood in stool, pneumatosis
nec medical or surgical
Medical
prelos
NoLOS
prenec
PostNEC
probiotics administration
During
project name
ena-STUDY-NEWCASTLE UNIVERSITY, UK-29-07-2020-07:51:53:774-2055
reads
5532414
sample name
NEW1046.S158.L005
sampleno
GY1269
scientific_name
gut metagenome
sequencing method
Illumina (Solexa) sequencing
sex
male