preterm stool
gut metagenome
ENA-FIRST-PUBLIC
2020-11-23T04:06:22Z
ENA-LAST-UPDATE
2020-07-29T12:49:10Z
External Id
SAMEA7097217
INSDC center name
NEWCASTLE UNIVERSITY, UK
INSDC first public
2020-11-23T04:06:22Z
INSDC last update
2020-07-29T12:49:10Z
INSDC status
public
Submitter Id
NEW1481.S110.L007
antibiotics admin
0(P2G2) 9(C4 V6) 38 (V9 C9) 40 (M6) 61 (V2M2C2)
antibiotics summary
Not_during
birthweight
600
blood culture
No
breast milk feeding
During
collection date
2014
day of life at sample collection
31
deliverymode
Vaginal
dirichlet multinomial mixtures cluster
1
dslnt_threshold
Below
environment (biome)
human
environment (feature)
intestine
environment (material)
faecal
formula feeding
Never
geographic location (country and/or sea)
United Kingdom
geographic location (latitude)
54.9783
geographic location (longitude)
1.6178
gestational age
24
host subject
364
human gut environmental package
human-gut
investigation type
metagenome
mother breast milk secretor status
NonSecretor
nec
Y
nec day onset
41
nec details
medical, definite pneumatosis, blood pr and low platelets high CRP
nec medical or surgical
Medical
prelos
NoLOS
prenec
PreNEC
probiotics administration
During
project name
ena-STUDY-NEWCASTLE UNIVERSITY, UK-29-07-2020-07:51:53:774-2055
reads
12020335
sample name
NEW1481.S110.L007
sampleno
159
scientific_name
gut metagenome
sequencing method
Illumina (Solexa) sequencing
sex
female