preterm stool
gut metagenome
ENA-FIRST-PUBLIC
2020-11-23T04:06:22Z
ENA-LAST-UPDATE
2020-07-29T12:49:12Z
External Id
SAMEA7097329
INSDC center name
NEWCASTLE UNIVERSITY, UK
INSDC first public
2020-11-23T04:06:22Z
INSDC last update
2020-07-29T12:49:12Z
INSDC status
public
Submitter Id
NEW1418.S234.L008
antibiotics admin
0 (P5G5) 12 (C5 ) 51 (A2 F2 ) 69 (V5C5M5)
antibiotics summary
Not_during
birthweight
890
blood culture
No
breast milk feeding
After
collection date
2018
day of life at sample collection
53
deliverymode
Caesarian
dirichlet multinomial mixtures cluster
5
dslnt_threshold
Above
environment (biome)
human
environment (feature)
intestine
environment (material)
faecal
formula feeding
During
geographic location (country and/or sea)
United Kingdom
geographic location (latitude)
54.9783
geographic location (longitude)
1.6178
gestational age
29
host subject
636
human gut environmental package
human-gut
investigation type
metagenome
mother breast milk secretor status
Secretor
nec
Y
nec day onset
69
nec details
pneumatosis, no plt fall, CRP 8
nec medical or surgical
Medical
prelos
NoLOS
prenec
PreNEC
probiotics administration
After
project name
ena-STUDY-NEWCASTLE UNIVERSITY, UK-29-07-2020-07:51:53:774-2055
reads
25456160
sample name
NEW1418.S234.L008
sampleno
6892
scientific_name
gut metagenome
sequencing method
Illumina (Solexa) sequencing
sex
male