preterm stool
gut metagenome
ENA-FIRST-PUBLIC
2020-11-23T04:06:22Z
ENA-LAST-UPDATE
2020-07-29T12:49:07Z
External Id
SAMEA7096987
INSDC center name
NEWCASTLE UNIVERSITY, UK
INSDC first public
2020-11-23T04:06:22Z
INSDC last update
2020-07-29T12:49:07Z
INSDC status
public
Submitter Id
NEW1831.S82.L003
antibiotics admin
0 (P2G2) 10 (C6V6) 22(A5F3G3)26 (V2)
antibiotics summary
Not_during
birthweight
650
blood culture
Yes
breast milk feeding
During
collection date
2017
date blood culture
14/07/2016
day of life at blood culture
22
day of life at sample collection
219
deliverymode
Vaginal
dirichlet multinomial mixtures cluster
5
dslnt_threshold
Above
environment (biome)
human
environment (feature)
intestine
environment (material)
faecal
formula feeding
Never
geographic location (country and/or sea)
United Kingdom
geographic location (latitude)
54.9783
geographic location (longitude)
1.6178
gestational age
23
host subject
465
human gut environmental package
human-gut
investigation type
metagenome
mother breast milk secretor status
Secretor
nec
N
nec medical or surgical
NoNEC
organism blood culture
Bifido Breve
prelos
PostLOS
prenec
NoNEC
probiotics administration
After
project name
ena-STUDY-NEWCASTLE UNIVERSITY, UK-29-07-2020-07:51:53:774-2055
reads
17269819
sample name
NEW1831.S82.L003
sampleno
5715
scientific_name
gut metagenome
sequencing method
Illumina (Solexa) sequencing
sex
male