preterm stool
gut metagenome
ENA-FIRST-PUBLIC
2020-11-23T04:06:22Z
ENA-LAST-UPDATE
2020-07-29T12:49:13Z
External Id
SAMEA7097399
INSDC center name
NEWCASTLE UNIVERSITY, UK
INSDC first public
2020-11-23T04:06:22Z
INSDC last update
2020-07-29T12:49:13Z
INSDC status
public
Submitter Id
NEW2683.S117.L004
antibiotics admin
0 (P2G2) 7 (V7 C7) 10 (M5 ) 36 (F5)
antibiotics summary
During
birthweight
720
blood culture
No
breast milk feeding
During
collection date
2018
day of life at sample collection
32
deliverymode
Caesarian
dirichlet multinomial mixtures cluster
4
dslnt_threshold
Above
environment (biome)
human
environment (feature)
intestine
environment (material)
faecal
formula feeding
Never
geographic location (country and/or sea)
United Kingdom
geographic location (latitude)
54.9783
geographic location (longitude)
1.6178
gestational age
26
host subject
629
human gut environmental package
human-gut
investigation type
metagenome
mother breast milk secretor status
Secretor
nec
Y
nec day onset
7
nec details
perforated ileal
nec medical or surgical
Surgical
prelos
NoLOS
prenec
PostNEC
probiotics administration
During
project name
ena-STUDY-NEWCASTLE UNIVERSITY, UK-29-07-2020-07:51:53:774-2055
reads
5880618
sample name
NEW2683.S117.L004
sampleno
IN/01_17/49
scientific_name
gut metagenome
sequencing method
Illumina (Solexa) sequencing
sex
male