preterm stool
gut metagenome
ENA-FIRST-PUBLIC
2020-11-23T04:06:22Z
ENA-LAST-UPDATE
2020-07-29T12:49:12Z
External Id
SAMEA7097333
INSDC center name
NEWCASTLE UNIVERSITY, UK
INSDC first public
2020-11-23T04:06:22Z
INSDC last update
2020-07-29T12:49:12Z
INSDC status
public
Submitter Id
NEW3491.S175.L006
antibiotics admin
0(P2G2) 8(Taz5) 30(V2Mero7) 52 (Mero5 V5 ) 61 (V2)
antibiotics summary
During
birthweight
740
blood culture
Yes
breast milk feeding
During
collection date
2016
day of life at blood culture
30
day of life at sample collection
12
deliverymode
Vaginal
dirichlet multinomial mixtures cluster
1
dslnt_threshold
Below
environment (biome)
human
environment (feature)
intestine
environment (material)
faecal
formula feeding
Never
geographic location (country and/or sea)
United Kingdom
geographic location (latitude)
54.9783
geographic location (longitude)
1.6178
gestational age
24
host subject
506
human gut environmental package
human-gut
investigation type
metagenome
mother breast milk secretor status
NonSecretor
nec
Y
nec day onset
52
nec details
NBM 5 days, fully fed again 11 days after beginning episode
nec medical or surgical
Medical
organism blood culture
E Coli
prelos
PreLOS
prenec
PreNEC
probiotics administration
During
project name
ena-STUDY-NEWCASTLE UNIVERSITY, UK-29-07-2020-07:51:53:774-2055
reads
11786819
sample name
NEW3491.S175.L006
sampleno
MG/A007/103
scientific_name
gut metagenome
sequencing method
Illumina (Solexa) sequencing
sex
male