E2068
fish metagenome
Alias
E2068
ENA checklist
ERC000040
INSDC center alias
QUEEN'S UNIVERSITY
INSDC center name
QUEEN'S UNIVERSITY
INSDC first public
2019-01-30T17:02:44Z
INSDC last update
2019-01-29T18:33:38Z
INSDC status
public
SRA accession
ERS3088639
Salinity
0
Sample Name
ERS3088639
Title
fish metagenome
age
10
barcode
301
collection date
2017-08-01
comments
Cysts on stomach, alimentary canal collected
date
2016-12-18
environment (biome)
Freshwater/Marine
environment (feature)
Lake/Ocean
environment (material)
Fish Mucosa
environmental_sample
Yes
fprimer
GTGYCAGCMGCCGCGGTAA
geartype
MM
geographic location (country and/or sea)
Canada
geographic location (latitude)
68° 37' 33.59 N
geographic location (longitude)
-95° 52' 2.39 W
intestine
no
lengthmm
340
location
G2
meshsizemm
89
pcr primers
515F-Y and 926R
pcrplate
4
roundweightg
440
rprimer
CCGYCAATTYMTTTRAGTTT
sample_number
2068
samplenumber
2068
season
winter
sex
male
site
10
skin
yes
species
cspp
speciesidbygeraint
C.sardinella OR C.autumnalis
speciesidconfidencebygeraint
5
target gene
16S
target subfragment
V4-V5
year
2016
yearclass
2006