preterm stool
gut metagenome
ENA-FIRST-PUBLIC
2020-11-23T04:06:22Z
ENA-LAST-UPDATE
2020-07-29T12:49:08Z
External Id
SAMEA7097031
INSDC center name
NEWCASTLE UNIVERSITY, UK
INSDC first public
2020-11-23T04:06:22Z
INSDC last update
2020-07-29T12:49:08Z
INSDC status
public
Submitter Id
NEW1886.S139.L005
antibiotics admin
0 (P2G2) 11 (V3C3) 14 (A11)
antibiotics summary
Not_during
birthweight
510
blood culture
Yes
breast milk feeding
During
collection date
2017
date blood culture
15/02/2017
day of life at blood culture
13
day of life at sample collection
37
deliverymode
Caesarian
dirichlet multinomial mixtures cluster
2
dslnt_threshold
Above
environment (biome)
human
environment (feature)
intestine
environment (material)
faecal
formula feeding
Never
geographic location (country and/or sea)
United Kingdom
geographic location (latitude)
54.9783
geographic location (longitude)
1.6178
gestational age
27
host subject
534
human gut environmental package
human-gut
investigation type
metagenome
mother breast milk secretor status
Secretor
nec
N
nec medical or surgical
NoNEC
organism blood culture
E coli
prelos
PostLOS
prenec
NoNEC
probiotics administration
During
project name
ena-STUDY-NEWCASTLE UNIVERSITY, UK-29-07-2020-07:51:53:774-2055
reads
10745075
sample name
NEW1886.S139.L005
sampleno
4869
scientific_name
gut metagenome
sequencing method
Illumina (Solexa) sequencing
sex
female