preterm stool
gut metagenome
ENA-FIRST-PUBLIC
2020-11-23T04:06:22Z
ENA-LAST-UPDATE
2020-07-29T12:49:11Z
External Id
SAMEA7097275
INSDC center name
NEWCASTLE UNIVERSITY, UK
INSDC first public
2020-11-23T04:06:22Z
INSDC last update
2020-07-29T12:49:11Z
INSDC status
public
Submitter Id
NEW1146.S226.L008
antibiotics admin
0 (P2G2) 5(A/G/F7) 7(M5) 17 (V2C2)
antibiotics summary
Not_during
birthweight
640
blood culture
No
breast milk feeding
After
collection date
2015
day of life at sample collection
52
deliverymode
Caesarian
dirichlet multinomial mixtures cluster
5
dslnt_threshold
Below
environment (biome)
human
environment (feature)
intestine
environment (material)
faecal
formula feeding
During
geographic location (country and/or sea)
United Kingdom
geographic location (latitude)
54.9783
geographic location (longitude)
1.6178
gestational age
27
host subject
415
human gut environmental package
human-gut
investigation type
metagenome
mother breast milk secretor status
Secretor
nec
Y
nec day onset
5
nec details
7 days NBM
nec medical or surgical
Medical
prelos
NoLOS
prenec
PostNEC
probiotics administration
After
project name
ena-STUDY-NEWCASTLE UNIVERSITY, UK-29-07-2020-07:51:53:774-2055
reads
32445436
sample name
NEW1146.S226.L008
sampleno
GY2288
scientific_name
gut metagenome
sequencing method
Illumina (Solexa) sequencing
sex
female