preterm stool
gut metagenome
ENA-FIRST-PUBLIC
2020-11-23T04:06:22Z
ENA-LAST-UPDATE
2020-07-29T12:49:08Z
External Id
SAMEA7097051
INSDC center name
NEWCASTLE UNIVERSITY, UK
INSDC first public
2020-11-23T04:06:22Z
INSDC last update
2020-07-29T12:49:08Z
INSDC status
public
Submitter Id
NEW1313.S140.L005
antibiotics admin
0(P2G2) 20 (F7) 27 (co-trimox5) 32 (mero 5) 39 (VCM5)
antibiotics summary
During
birthweight
900
blood culture
No
breast milk feeding
During
collection date
2017
day of life at sample collection
21
deliverymode
Vaginal
dirichlet multinomial mixtures cluster
3
dslnt_threshold
Above
environment (biome)
human
environment (feature)
intestine
environment (material)
faecal
formula feeding
Never
geographic location (country and/or sea)
United Kingdom
geographic location (latitude)
54.9783
geographic location (longitude)
1.6178
gestational age
25
host subject
559
human gut environmental package
human-gut
investigation type
metagenome
mother breast milk secretor status
Secretor
nec
N
nec medical or surgical
NoNEC
prelos
NoLOS
prenec
NoNEC
probiotics administration
During
project name
ena-STUDY-NEWCASTLE UNIVERSITY, UK-29-07-2020-07:51:53:774-2055
reads
9065788
sample name
NEW1313.S140.L005
sampleno
5302
scientific_name
gut metagenome
sequencing method
Illumina (Solexa) sequencing
sex
male