preterm stool
gut metagenome
ENA-FIRST-PUBLIC
2020-11-23T04:06:22Z
ENA-LAST-UPDATE
2020-07-29T12:49:12Z
External Id
SAMEA7097302
INSDC center name
NEWCASTLE UNIVERSITY, UK
INSDC first public
2020-11-23T04:06:22Z
INSDC last update
2020-07-29T12:49:12Z
INSDC status
public
Submitter Id
NEW1783.S47.L002
antibiotics admin
0 (P1G1) 1(v5) 12 (A2F2) 14(c0-amox5) 21 (co-trimoxazole 5) 38 (Cef8M8co-trimox8)
antibiotics summary
During
birthweight
500
blood culture
No
breast milk feeding
During
collection date
2016
day of life at sample collection
25
deliverymode
Vaginal
dirichlet multinomial mixtures cluster
1
dslnt_threshold
Below
environment (biome)
human
environment (feature)
intestine
environment (material)
faecal
formula feeding
Never
geographic location (country and/or sea)
United Kingdom
geographic location (latitude)
54.9783
geographic location (longitude)
1.6178
gestational age
24
host subject
451
human gut environmental package
human-gut
investigation type
metagenome
mother breast milk secretor status
Secretor
nec
Y
nec day onset
38
nec details
medicaly managed 8 days NBM and abs, CRP>200
nec medical or surgical
Medical
prelos
NoLOS
prenec
PreNEC
probiotics administration
During
project name
ena-STUDY-NEWCASTLE UNIVERSITY, UK-29-07-2020-07:51:53:774-2055
reads
35804314
sample name
NEW1783.S47.L002
sampleno
3584
scientific_name
gut metagenome
sequencing method
Illumina (Solexa) sequencing
sex
male