preterm stool
gut metagenome
ENA-FIRST-PUBLIC
2020-11-23T04:06:22Z
ENA-LAST-UPDATE
2020-07-29T12:49:13Z
External Id
SAMEA7097385
INSDC center name
NEWCASTLE UNIVERSITY, UK
INSDC first public
2020-11-23T04:06:22Z
INSDC last update
2020-07-29T12:49:13Z
INSDC status
public
Submitter Id
NEW1991.S9.L001
antibiotics admin
0 (P2G2) 5 (V7C2 ) 12 (V123C12M12 ) 31 (co-trimox ) 34 (mero26 ) 74 (F5)
antibiotics summary
During
birthweight
710
blood culture
Yes
breast milk feeding
After
collection date
2017
date blood culture
28/10/2017
day of life at blood culture
34
day of life at sample collection
38
deliverymode
Caesarian
dirichlet multinomial mixtures cluster
5
dslnt_threshold
Below
environment (biome)
human
environment (feature)
intestine
environment (material)
faecal
formula feeding
During
geographic location (country and/or sea)
United Kingdom
geographic location (latitude)
54.9783
geographic location (longitude)
1.6178
gestational age
27
host subject
596
human gut environmental package
human-gut
investigation type
metagenome
mother breast milk secretor status
NonSecretor
nec
Y
nec day onset
51
nec details
definite no doubt!
nec medical or surgical
Surgical
organism blood culture
Enterobacter cloacae
prelos
PostLOS
prenec
PreNEC
probiotics administration
Never
project name
ena-STUDY-NEWCASTLE UNIVERSITY, UK-29-07-2020-07:51:53:774-2055
reads
41310098
sample name
NEW1991.S9.L001
sampleno
6145
scientific_name
gut metagenome
sequencing method
Illumina (Solexa) sequencing
sex
male