American Gut Project; 10317.000071932
human gut metagenome
American Gut Project Stool sample
ENA-FIRST-PUBLIC
2018-05-12T17:02:50Z
ENA-LAST-UPDATE
2018-05-12T06:15:39Z
External Id
SAMEA4662666
INSDC center name
UCSDMI
INSDC first public
2018-05-12T17:02:50Z
INSDC last update
2018-05-12T06:15:39Z
INSDC status
public
Submitter Id
qiita_sid_10317:10317.000071932
acid_reflux
Diagnosed by a medical professional (doctor, physician assistant)
acne medication
No
acne_medication_otc
No
add_adhd
I do not have this condition
age cat
70+
age years
73
age_corrected
73.0
alcohol consumption
No
alcohol_frequency
Never
alcohol_types
Unspecified
alcohol_types_beercider
No
alcohol_types_red_wine
No
alcohol_types_sour_beers
No
alcohol_types_spiritshard_alcohol
No
alcohol_types_unspecified
Yes
alcohol_types_white_wine
No
allergic to i have no food allergies that i know of
No
allergic_to
Unspecified
allergic_to_other
Yes
allergic_to_peanuts
No
allergic_to_shellfish
No
allergic_to_tree_nuts
No
allergic_to_unspecified
No
alzheimers
I do not have this condition
anonymized name
000071932
antibiotic_history
6 months
appendix_removed
Yes
artificial_sweeteners
Occasionally (1-2 times/week)
asd
I do not have this condition
assigned_from_geo
Yes
autoimmune
I do not have this condition
birth year
1943
bmi
33.28
bmi_cat
Obese
bmi_corrected
33.28
body habitat
UBERON:feces
body product
UBERON:feces
body site
UBERON:feces
bowel_movement_frequency
Unspecified
bowel_movement_quality
I tend to have diarrhea (watery stool) - Type 5, 6 and 7
breastmilk_formula_ensure
No
cancer
Diagnosed by a medical professional (doctor, physician assistant)
cancer treatment
Radiation therapy
cardiovascular_disease
Diagnosed by a medical professional (doctor, physician assistant)
cat
No
cdiff
I do not have this condition
census_region
Unspecified
chickenpox
Yes
clinical condition
Self-diagnosed
collection date
2017-06-15
collection month
June
collection season
Summer
collection time
16:10
collection_timestamp
06/15/2017 16:10
consume_animal_products_abx
Yes
contraceptive
No
cosmetics_frequency
Never
country
USA
country of birth
United States
country_residence
United States
csection
Yes
deodorant_use
Not sure, but I use some form of deodorant/antiperspirant
depression_bipolar_schizophrenia
Unspecified
diabetes
Diagnosed by a medical professional (doctor, physician assistant)
diabetes type
Type II diabetes
diet type
Omnivore
dna_extracted
Yes
dog
No
dominant hand
I am right handed
drinking_water_source
Bottled
drinks_per_session
I don't drink
economic_region
Unspecified
elevation
Unspecified
env biome
dense settlement biome
env feature
human-associated habitat
env package
human-gut
env_material
feces
epilepsy_or_seizure_disorder
I do not have this condition
exercise_frequency
Never
exercise_location
None of the above
fed_as_infant
Not sure
fermented_plant_frequency
Never
flossing_frequency
Never
flu_vaccine_date
Year
frozen_dessert_frequency
Occasionally (1-2 times/week)
fruit_frequency
Never
fungal_overgrowth
I do not have this condition
geo loc name
USA:Unspecified
gluten
No
height cm
165
height_units
centimeters
high_fat_red_meat_frequency
Never
homecooked_meals_frequency
Rarely (less than once/week)
host common name
human
host subject id
67852fa3bd7d278f1b13be931d64d29c02c32591b95e95996e5da10a993364fbd34aa339b560294ec3c417af68edae353d4573e92a3f17871156903038f5629b
host taxid
9606
ibd
Self-diagnosed
ibd diagnosis
Unspecified
ibd_diagnosis_refined
Unspecified
ibs
Self-diagnosed
kidney_disease
I do not have this condition
lactose
No
last_move
I have lived in my current state of residence for more than a year.
last_travel
I have not been outside of my country of residence in the past year.
latitude
Unspecified
level_of_education
Did not complete high school
liver_disease
I do not have this condition
livingwith
Yes
longitude
Unspecified
lowgrain_diet_type
Unspecified
lung disease
Diagnosed by a medical professional (doctor, physician assistant)
meat_eggs_frequency
Regularly (3-5 times/week)
mental_illness
Yes
mental_illness_type
Unspecified
mental_illness_type_anorexia_nervosa
No
mental_illness_type_bipolar_disorder
No
mental_illness_type_bulimia_nervosa
No
mental_illness_type_depression
Yes
mental_illness_type_ptsd_posttraumatic_stress_disorder
Yes
mental_illness_type_schizophrenia
No
mental_illness_type_substance_abuse
No
mental_illness_type_unspecified
No
migraine
Self-diagnosed
milk_cheese_frequency
Daily
milk_substitute_frequency
Never
multivitamin
Yes
nail_biter
No
non_food_allergies
Unspecified
non_food_allergies_beestings
No
non_food_allergies_drug_eg_penicillin
Yes
non_food_allergies_pet_dander
No
non_food_allergies_poison_ivyoak
Yes
non_food_allergies_sun
No
non_food_allergies_unspecified
No
olive_oil
Never
one_liter_of_water_a_day_frequency
Never
other_supplement_frequency
Yes
pets_other
No
physical_specimen_location
UCSDMI
physical_specimen_remaining
Yes
pku
I do not have this condition
pool_frequency
Never
poultry_frequency
Never
pregnant
No
prepared_meals_frequency
Never
probiotic_frequency
Occasionally (1-2 times/week)
public
Yes
race
Caucasian
ready_to_eat_meals_frequency
Regularly (3-5 times/week)
red_meat_frequency
Rarely (less than once/week)
roommates_in_study
No
salted_snacks_frequency
Never
sample name
qiita_sid_10317:10317.000071932
sample type
Stool
scientific_name
human gut metagenome
seafood_frequency
Rarely (less than once/week)
seasonal_allergies
Yes
sex
female
sibo
I do not have this condition
skin_condition
Diagnosed by a medical professional (doctor, physician assistant)
sleep_duration
Less than 5 hours
smoking_frequency
Daily
softener
Yes
specialized_diet
Unspecified
specialized_diet_exclude_dairy
No
specialized_diet_exclude_nightshades
No
specialized_diet_exclude_refined_sugars
No
specialized_diet_fodmap
No
specialized_diet_halaal
No
specialized_diet_i_do_not_eat_a_specialized_diet
Yes
specialized_diet_kosher
No
specialized_diet_modified_paleo_diet
No
specialized_diet_other_restrictions_not_described_here
No
specialized_diet_paleodiet_or_primal_diet
No
specialized_diet_raw_food_diet
No
specialized_diet_unspecified
No
specialized_diet_westenprice_or_other_lowgrain_low_processed_fo
No
state
Unspecified
subset_age
False
subset_antibiotic_history
False
subset_bmi
False
subset_diabetes
False
subset_healthy
False
subset_ibd
False
sugar_sweetened_drink_frequency
Occasionally (1-2 times/week)
sugary_sweets_frequency
Rarely (less than once/week)
survey_id
335b6227b969546d
teethbrushing_frequency
Daily
thyroid
I do not have this condition
tonsils_removed
Yes
types_of_plants
Less than 5
vegetable_frequency
Rarely (less than once/week)
vitamin_b_supplement_frequency
Never
vitamin_d_supplement_frequency
Never
vivid_dreams
Never
weight kg
90
weight_change
Increased more than 10 pounds
weight_units
kilograms
whole_eggs
Regularly (3-5 times/week)
whole_grain_frequency
Rarely (less than once/week)