human metagenome
strain
not applicable
isolate
not applicable
host
Homo sapiens
isolation_source
Penis
collection_date
missing
geo_loc_name
South Africa: Cape Town
sample_type
Penile swab
genotype
bacteria
altitude
not applicable
lat_lon
not applicable
LibraryID
P-Library1-6_S56_L001
LibraryNo
P-Library1
barcode_sequence
CAGAGAGGGTAAGGAG
linker_primer_sequence
CCTACGGGNGGCWGCAG
reverse_primer
GACTACHVGGGTATCTAATCC
Age
29
HIV
y
arv
2
arvtype2
not applicable
female.part
no.part
married
0
regsex
1
partreg
3
livetog
1
age1sex
15
lifeparts
15
sex1month
5
contracep
1
nowcondom
1
circumsized
0
cigs
1
discharge
1
discharge2
1
ulcer
2
pap
n
CD4
223
HPV
positive
HPV types (Roche Genotyping)
11, 18, 45, 53, 70, 73, 81
Low B globin
positive
High B globin
positive
BioSampleModel
Metagenome or environmental