10317.000090060; American Gut Project
human gut metagenome
American Gut Project Stool sample
ENA-FIRST-PUBLIC
2018-05-12T17:02:51Z
ENA-LAST-UPDATE
2018-05-11T22:20:52Z
External Id
SAMEA4662262
INSDC center name
UCSDMI
INSDC first public
2018-05-12T17:02:51Z
INSDC last update
2018-05-11T22:20:52Z
INSDC status
public
Submitter Id
qiita_sid_10317:10317.000090060
acid_reflux
Unspecified
acne medication
No
acne_medication_otc
No
add_adhd
Unspecified
age cat
Unspecified
age years
49
age_corrected
Unspecified
alcohol consumption
Yes
alcohol_frequency
Rarely (a few times/month)
alcohol_types
Unspecified
alcohol_types_beercider
Yes
alcohol_types_red_wine
Yes
alcohol_types_sour_beers
No
alcohol_types_spiritshard_alcohol
No
alcohol_types_unspecified
No
alcohol_types_white_wine
No
allergic to i have no food allergies that i know of
No
allergic_to
Unspecified
allergic_to_other
Yes
allergic_to_peanuts
No
allergic_to_shellfish
No
allergic_to_tree_nuts
No
allergic_to_unspecified
No
alzheimers
I do not have this condition
anonymized name
000090060
antibiotic_history
Unspecified
appendix_removed
Yes
artificial_sweeteners
Rarely (a few times/month)
asd
I do not have this condition
assigned_from_geo
Yes
autoimmune
Diagnosed by a medical professional (doctor, physician assistant)
birth year
1968
bmi
Unspecified
bmi_cat
Unspecified
bmi_corrected
Unspecified
body habitat
UBERON:feces
body product
UBERON:feces
body site
UBERON:feces
bowel_movement_frequency
Unspecified
bowel_movement_quality
Unspecified
breastmilk_formula_ensure
No
cancer
I do not have this condition
cancer treatment
Unspecified
cardiovascular_disease
I do not have this condition
cat
Yes
cdiff
Unspecified
census_region
Unspecified
chickenpox
Not sure
clinical condition
Diagnosed by a medical professional (doctor, physician assistant)
collection date
03/09/2018
collection month
March
collection season
Spring
collection time
13:30
collection_timestamp
03/09/2018 13:30
consume_animal_products_abx
Yes
contraceptive
No
cosmetics_frequency
Occasionally (1-2 times/week)
country
Canada
country of birth
Canada
country_residence
Canada
csection
Not sure
deodorant_use
Not sure, but I use some form of deodorant/antiperspirant
depression_bipolar_schizophrenia
Unspecified
diabetes
Unspecified
diabetes type
Unspecified
diet type
Omnivore
dna_extracted
Yes
dog
Yes
dominant hand
I am right handed
drinking_water_source
City
drinks_per_session
1-2
economic_region
Unspecified
elevation
Unspecified
env biome
dense settlement biome
env feature
human-associated habitat
env package
human-gut
env_material
feces
epilepsy_or_seizure_disorder
I do not have this condition
exercise_frequency
Occasionally (1-2 times/week)
exercise_location
Both
fed_as_infant
Not sure
fermented_plant_frequency
Unspecified
flossing_frequency
Unspecified
flu_vaccine_date
Unspecified
frozen_dessert_frequency
Never
fruit_frequency
Unspecified
fungal_overgrowth
Unspecified
geo loc name
Canada:Unspecified
gluten
No
height cm
157
height_units
centimeters
high_fat_red_meat_frequency
Unspecified
homecooked_meals_frequency
Daily
host
99490be328e788a728d715703248e1174aa3d764f192581b6e9c1f4d81d9a07cd2c1db67a07994fd639ac5372d214cd5e47d37c906e4c5c0119c179b1e881431
host common name
human
host taxid
9606
ibd
I do not have this condition
ibd diagnosis
Unspecified
ibd_diagnosis_refined
Unspecified
ibs
Unspecified
kidney_disease
I do not have this condition
lactose
No
last_move
I have lived in my current state of residence for more than a year.
last_travel
6 months
latitude
Unspecified
level_of_education
Graduate or Professional degree
liver_disease
Diagnosed by a medical professional (doctor, physician assistant)
livingwith
No
longitude
Unspecified
lowgrain_diet_type
Unspecified
lung disease
I do not have this condition
meat_eggs_frequency
Daily
mental_illness
Yes
mental_illness_type
Unspecified
mental_illness_type_anorexia_nervosa
No
mental_illness_type_bipolar_disorder
No
mental_illness_type_bulimia_nervosa
No
mental_illness_type_depression
No
mental_illness_type_ptsd_posttraumatic_stress_disorder
No
mental_illness_type_schizophrenia
No
mental_illness_type_substance_abuse
No
mental_illness_type_unspecified
Yes
migraine
Diagnosed by a medical professional (doctor, physician assistant)
milk_cheese_frequency
Rarely (less than once/week)
milk_substitute_frequency
Unspecified
multivitamin
No
nail_biter
No
non_food_allergies
Unspecified
non_food_allergies_beestings
No
non_food_allergies_drug_eg_penicillin
No
non_food_allergies_pet_dander
No
non_food_allergies_poison_ivyoak
No
non_food_allergies_sun
No
non_food_allergies_unspecified
Yes
olive_oil
Unspecified
one_liter_of_water_a_day_frequency
Regularly (3-5 times/week)
other_supplement_frequency
No
pets_other
No
physical_specimen_location
UCSDMI
physical_specimen_remaining
Yes
pku
I do not have this condition
pool_frequency
Rarely (a few times/month)
poultry_frequency
Unspecified
pregnant
No
prepared_meals_frequency
Occasionally (1-2 times/week)
probiotic_frequency
Never
public
Yes
race
Caucasian
ready_to_eat_meals_frequency
Occasionally (1-2 times/week)
red_meat_frequency
Regularly (3-5 times/week)
roommates_in_study
No
salted_snacks_frequency
Unspecified
sample name
qiita_sid_10317:10317.000090060
sample type
Stool
scientific_name
human gut metagenome
seafood_frequency
Rarely (less than once/week)
seasonal_allergies
Yes
sex
female
sibo
I do not have this condition
skin_condition
Unspecified
sleep_duration
5-6 hours
smoking_frequency
Never
softener
Yes
specialized_diet
Unspecified
specialized_diet_exclude_dairy
Yes
specialized_diet_exclude_nightshades
No
specialized_diet_exclude_refined_sugars
No
specialized_diet_fodmap
No
specialized_diet_halaal
No
specialized_diet_i_do_not_eat_a_specialized_diet
No
specialized_diet_kosher
No
specialized_diet_modified_paleo_diet
No
specialized_diet_other_restrictions_not_described_here
No
specialized_diet_paleodiet_or_primal_diet
Yes
specialized_diet_raw_food_diet
No
specialized_diet_unspecified
No
specialized_diet_westenprice_or_other_lowgrain_low_processed_fo
No
state
Unspecified
subset_age
True
subset_antibiotic_history
False
subset_bmi
False
subset_diabetes
False
subset_healthy
False
subset_ibd
True
sugar_sweetened_drink_frequency
Rarely (less than once/week)
sugary_sweets_frequency
Unspecified
survey_id
f15be4a70278925b
teethbrushing_frequency
Daily
thyroid
Diagnosed by a medical professional (doctor, physician assistant)
tonsils_removed
Unspecified
types_of_plants
Unspecified
vegetable_frequency
Unspecified
vitamin_b_supplement_frequency
Unspecified
vitamin_d_supplement_frequency
Daily
vivid_dreams
Occasionally (1-2 times/week)
weight kg
Unspecified
weight_change
Unspecified
weight_units
kilograms
whole_eggs
Unspecified
whole_grain_frequency
Rarely (less than once/week)