human metagenome
strain
not applicable
isolate
not applicable
host
Homo sapiens
isolation_source
Penis
collection_date
missing
geo_loc_name
South Africa: Cape Town
sample_type
Penile swab
genotype
bacteria
altitude
not applicable
lat_lon
not applicable
LibraryID
P-Library2-84_S83_L001
LibraryNo
P-Library2
barcode_sequence
AAGAGGCAAAGGAGTA
linker_primer_sequence
CCTACGGGNGGCWGCAG
reverse_primer
GACTACHVGGGTATCTAATCC
Age
33
HIV
y
arv
2
arvtype2
not applicable
female.part
F803
married
2
regsex
5
partreg
9
livetog
2
age1sex
16
lifeparts
5
sex1month
15
contracep
1
nowcondom
1
circumsized
2
cigs
3
discharge
2
discharge2
not applicable
ulcer
2
pap
n
CD4
638
HPV
positive
HPV types (Roche Genotyping)
6, 18, 39, 40, 45, 53, 58, 61, 62, 72, 81, 83, 89
Low B globin
positive
High B globin
positive
BioSampleModel
Metagenome or environmental