human metagenome
strain
not applicable
isolate
not applicable
host
Homo sapiens
isolation_source
Penis
collection_date
missing
geo_loc_name
South Africa: Cape Town
sample_type
Penile swab
genotype
bacteria
altitude
not applicable
lat_lon
not applicable
LibraryID
P-Library3-73_S71_L001
LibraryNo
P-Library3
barcode_sequence
AAGAGGCAACTGCATA
linker_primer_sequence
CCTACGGGNGGCWGCAG
reverse_primer
GACTACHVGGGTATCTAATCC
Age
42
HIV
y
arv
2
arvtype2
not applicable
female.part
no.part
married
2
regsex
2
partreg
1
livetog
2
age1sex
13
lifeparts
75
sex1month
15
contracep
2
nowcondom
2
circumsized
1
cigs
3
discharge
2
discharge2
not applicable
ulcer
2
pap
n
CD4
151
HPV
positive
HPV types (Roche Genotyping)
16, 45, 56, 59, 66, 81, 89
Low B globin
positive
High B globin
positive
BioSampleModel
Metagenome or environmental