10317.000049962; American Gut Project
human gut metagenome
American Gut Project Stool sample
ENA-FIRST-PUBLIC
2018-05-12T17:02:50Z
ENA-LAST-UPDATE
2018-05-12T06:15:16Z
External Id
SAMEA4662484
INSDC center name
UCSDMI
INSDC first public
2018-05-12T17:02:50Z
INSDC last update
2018-05-12T06:15:16Z
INSDC status
public
Submitter Id
qiita_sid_10317:10317.000049962
acid_reflux
Diagnosed by a medical professional (doctor, physician assistant)
acne medication
No
acne_medication_otc
Yes
add_adhd
I do not have this condition
age cat
30s
age years
34
age_corrected
34.0
alcohol consumption
Yes
alcohol_frequency
Rarely (a few times/month)
alcohol_types
Unspecified
alcohol_types_beercider
No
alcohol_types_red_wine
No
alcohol_types_sour_beers
No
alcohol_types_spiritshard_alcohol
Yes
alcohol_types_unspecified
No
alcohol_types_white_wine
Yes
allergic to i have no food allergies that i know of
Yes
allergic_to
Unspecified
allergic_to_other
No
allergic_to_peanuts
No
allergic_to_shellfish
No
allergic_to_tree_nuts
No
allergic_to_unspecified
No
alzheimers
I do not have this condition
anonymized name
000049962
antibiotic_history
I have not taken antibiotics in the past year.
appendix_removed
No
artificial_sweeteners
Rarely (a few times/month)
asd
I do not have this condition
assigned_from_geo
Yes
autoimmune
I do not have this condition
birth year
1982
bmi
22.60
bmi_cat
Normal
bmi_corrected
22.60
body habitat
UBERON:feces
body product
UBERON:feces
body site
UBERON:feces
bowel_movement_frequency
One
bowel_movement_quality
I tend to have normal formed stool - Type 3 and 4
breastmilk_formula_ensure
No
cancer
I do not have this condition
cancer treatment
Unspecified
cardiovascular_disease
I do not have this condition
cat
No
cdiff
I do not have this condition
census_region
Unspecified
chickenpox
Yes
clinical condition
Diagnosed by a medical professional (doctor, physician assistant)
collection date
2017-06-15
collection month
June
collection season
Summer
collection time
11:00
collection_timestamp
06/15/2017 11:00
consume_animal_products_abx
Yes
contraceptive
No
cosmetics_frequency
Regularly (3-5 times/week)
country
United Kingdom
country of birth
United Kingdom
country_residence
United Kingdom
csection
No
deodorant_use
I use deodorant
depression_bipolar_schizophrenia
Unspecified
diabetes
I do not have this condition
diabetes type
Unspecified
diet type
Omnivore
dna_extracted
Yes
dog
No
dominant hand
I am right handed
drinking_water_source
City
drinks_per_session
1-2
economic_region
Unspecified
elevation
Unspecified
env biome
dense settlement biome
env feature
human-associated habitat
env package
human-gut
env_material
feces
epilepsy_or_seizure_disorder
I do not have this condition
exercise_frequency
Rarely (a few times/month)
exercise_location
Outdoors
fed_as_infant
Primarily breast milk
fermented_plant_frequency
Rarely (less than once/week)
flossing_frequency
Never
flu_vaccine_date
I have not gotten the flu vaccine in the past year.
food type
Unknown
food_source_wild_food
Unknown
food_special
Unknown
food_special_grain_free
Unknown
food_special_organic
Unknown
food_special_unspecified
Unknown
frozen_dessert_frequency
Rarely (less than once/week)
fruit_frequency
Regularly (3-5 times/week)
fungal_overgrowth
I do not have this condition
geo loc name
United Kingdom:Unspecified
gluten
No
has_physical_specimen
Unknown
height cm
167
height_units
centimeters
high_fat_red_meat_frequency
Rarely (less than once/week)
homecooked_meals_frequency
Daily
host
Unknown
host common name
human
host subject id
fc4b38895fa3edf9b6caa214703069c750e19f8a8c236f571421d1d0230ec7ac9dea136e214d84570b2f73886c457515c6991b5905ed9725e769e8fdb3417772
host taxid
9606
hours_outside
Unknown
humans_free_text
Unknown
ibd
I do not have this condition
ibd diagnosis
Unspecified
ibd_diagnosis_refined
Unspecified
ibs
I do not have this condition
kidney_disease
I do not have this condition
lactose
No
last_move
I have lived in my current state of residence for more than a year.
last_travel
Month
latitude
Unspecified
level_of_education
Some graduate school or professional
liver_disease
I do not have this condition
living_status
Unknown
livingwith
Yes
longitude
Unspecified
lowgrain_diet_type
Unspecified
lung disease
I do not have this condition
meat_eggs_frequency
Regularly (3-5 times/week)
mental_illness
No
mental_illness_type
Unspecified
mental_illness_type_anorexia_nervosa
No
mental_illness_type_bipolar_disorder
No
mental_illness_type_bulimia_nervosa
No
mental_illness_type_depression
No
mental_illness_type_ptsd_posttraumatic_stress_disorder
No
mental_illness_type_schizophrenia
No
mental_illness_type_substance_abuse
No
mental_illness_type_unspecified
Yes
migraine
I do not have this condition
milk_cheese_frequency
Regularly (3-5 times/week)
milk_substitute_frequency
Never
multivitamin
Yes
nail_biter
No
name
Unknown
non_food_allergies
Unspecified
non_food_allergies_beestings
No
non_food_allergies_drug_eg_penicillin
No
non_food_allergies_pet_dander
No
non_food_allergies_poison_ivyoak
No
non_food_allergies_sun
No
non_food_allergies_unspecified
Yes
olive_oil
Regularly (3-5 times/week)
one_liter_of_water_a_day_frequency
Daily
other_animals_free_text
Unknown
other_supplement_frequency
No
pets_other
No
pets_other_freetext
Unknown
physical_specimen_location
UCSDMI
physical_specimen_remaining
Yes
pku
I do not have this condition
pool_frequency
Never
poultry_frequency
Rarely (less than once/week)
pregnant
Yes
prepared_meals_frequency
Occasionally (1-2 times/week)
probiotic_frequency
Never
public
Yes
qiita_empo_1
Unknown
qiita_empo_2
Unknown
qiita_empo_3
Unknown
race
Caucasian
ready_to_eat_meals_frequency
Rarely (less than once/week)
red_meat_frequency
Rarely (less than once/week)
roommates
None
roommates_in_study
No
salted_snacks_frequency
Occasionally (1-2 times/week)
sample name
qiita_sid_10317:10317.000049962
sample type
Stool
scientific_name
human gut metagenome
seafood_frequency
Occasionally (1-2 times/week)
seasonal_allergies
No
setting
Unknown
sex
female
sibo
I do not have this condition
skin_condition
I do not have this condition
sleep_duration
7-8 hours
smoking_frequency
Never
softener
Yes
specialized_diet
Unspecified
specialized_diet_exclude_dairy
No
specialized_diet_exclude_nightshades
No
specialized_diet_exclude_refined_sugars
No
specialized_diet_fodmap
No
specialized_diet_halaal
No
specialized_diet_i_do_not_eat_a_specialized_diet
Yes
specialized_diet_kosher
No
specialized_diet_modified_paleo_diet
No
specialized_diet_other_restrictions_not_described_here
No
specialized_diet_paleodiet_or_primal_diet
No
specialized_diet_raw_food_diet
No
specialized_diet_unspecified
No
specialized_diet_westenprice_or_other_lowgrain_low_processed_fo
No
state
Unspecified
subset_age
True
subset_antibiotic_history
True
subset_bmi
True
subset_diabetes
True
subset_healthy
True
subset_ibd
True
sugar_sweetened_drink_frequency
Never
sugary_sweets_frequency
Daily
surf_board_type
Unknown
surf_frequency
Unknown
surf_loal_break_frequency
Unknown
surf_local_break
Unknown
surf_shower_frequency
Unknown
surf_stance
Unknown
surf_sunscreen
Unknown
surf_sunscreen_frequency
Unknown
surf_travel_distance
Unknown
surf_travel_frequency
Unknown
surf_wax
Unknown
surf_weetsuit
Unknown
survey_id
1333d8bca46191b2
teethbrushing_frequency
Daily
thyroid
I do not have this condition
toilet_water_access
Unknown
tonsils_removed
No
types_of_plants
6 to 10
vegetable_frequency
Regularly (3-5 times/week)
vioscreen_a_bev
Unknown
vioscreen_a_cal
Unknown
vioscreen_acesupot
Unknown
vioscreen_activity_level
Unknown
vioscreen_add_sug
Unknown
vioscreen_addsugar
Unknown
vioscreen_adsugtot
Unknown
vioscreen_age
Unknown
vioscreen_alanine
Unknown
vioscreen_alcohol
Unknown
vioscreen_alcohol_servings
Unknown
vioscreen_alphacar
Unknown
vioscreen_alphtoce
Unknown
vioscreen_alphtoco
Unknown
vioscreen_arginine
Unknown
vioscreen_ash
Unknown
vioscreen_aspartam
Unknown
vioscreen_aspartic
Unknown
vioscreen_avcarb
Unknown
vioscreen_bcodeid
Unknown
vioscreen_betacar
Unknown
vioscreen_betacryp
Unknown
vioscreen_betaine
Unknown
vioscreen_betatoco
Unknown
vioscreen_biochana
Unknown
vioscreen_bmi
Unknown
vioscreen_caffeine
Unknown
vioscreen_calcium
Unknown
vioscreen_calcium_avg
Unknown
vioscreen_calcium_dose
Unknown
vioscreen_calcium_freq
Unknown
vioscreen_calcium_from_dairy_servings
Unknown
vioscreen_calcium_servings
Unknown
vioscreen_calories
Unknown
vioscreen_carbo
Unknown
vioscreen_cholest
Unknown
vioscreen_choline
Unknown
vioscreen_clac9t11
Unknown
vioscreen_clat10c12
Unknown
vioscreen_copper
Unknown
vioscreen_coumest
Unknown
vioscreen_cystine
Unknown
vioscreen_d_cheese
Unknown
vioscreen_d_milk
Unknown
vioscreen_d_tot_soym
Unknown
vioscreen_d_total
Unknown
vioscreen_d_yogurt
Unknown
vioscreen_daidzein
Unknown
vioscreen_database
Unknown
vioscreen_delttoco
Unknown
vioscreen_discfat_oil
Unknown
vioscreen_discfat_sol
Unknown
vioscreen_dob
Unknown
vioscreen_eer
Unknown
vioscreen_email
Unknown
vioscreen_erythr
Unknown
vioscreen_f_citmlb
Unknown
vioscreen_f_nj_citmlb
Unknown
vioscreen_f_nj_other
Unknown
vioscreen_f_nj_total
Unknown
vioscreen_f_other
Unknown
vioscreen_f_total
Unknown
vioscreen_fat
Unknown
vioscreen_fiber
Unknown
vioscreen_fibh2o
Unknown
vioscreen_fibinso
Unknown
vioscreen_finished
Unknown
vioscreen_fish_servings
Unknown
vioscreen_fol_deqv
Unknown
vioscreen_fol_nat
Unknown
vioscreen_fol_syn
Unknown
vioscreen_formontn
Unknown
vioscreen_fried_fish_servings
Unknown
vioscreen_fried_food_servings
Unknown
vioscreen_frt5_day
Unknown
vioscreen_frtsumm
Unknown
vioscreen_fructose
Unknown
vioscreen_fruit_servings
Unknown
vioscreen_g_nwhl
Unknown
vioscreen_g_total
Unknown
vioscreen_g_whl
Unknown
vioscreen_galactos
Unknown
vioscreen_gammtoco
Unknown
vioscreen_gender
Unknown
vioscreen_genistn
Unknown
vioscreen_glac
Unknown
vioscreen_gltc
Unknown
vioscreen_glucose
Unknown
vioscreen_glutamic
Unknown
vioscreen_glycine
Unknown
vioscreen_glycitn
Unknown
vioscreen_grams
Unknown
vioscreen_hei2010_dairy
Unknown
vioscreen_hei2010_empty_calories
Unknown
vioscreen_hei2010_fatty_acids
Unknown
vioscreen_hei2010_fruit
Unknown
vioscreen_hei2010_greens_beans
Unknown
vioscreen_hei2010_protien_foods
Unknown
vioscreen_hei2010_refined_grains
Unknown
vioscreen_hei2010_score
Unknown
vioscreen_hei2010_sea_foods_plant_protiens
Unknown
vioscreen_hei2010_sodium
Unknown
vioscreen_hei2010_veg
Unknown
vioscreen_hei2010_whole_fruit
Unknown
vioscreen_hei2010_whole_grains
Unknown
vioscreen_hei_drk_g_org_veg_leg
Unknown
vioscreen_hei_fruit
Unknown
vioscreen_hei_grains
Unknown
vioscreen_hei_meat_beans
Unknown
vioscreen_hei_milk
Unknown
vioscreen_hei_non_juice_frt
Unknown
vioscreen_hei_oils
Unknown
vioscreen_hei_sat_fat
Unknown
vioscreen_hei_score
Unknown
vioscreen_hei_sodium
Unknown
vioscreen_hei_sol_fat_alc_add_sug
Unknown
vioscreen_hei_veg
Unknown
vioscreen_hei_whl_grains
Unknown
vioscreen_height
Unknown
vioscreen_histidin
Unknown
vioscreen_inositol
Unknown
vioscreen_iron
Unknown
vioscreen_isoleuc
Unknown
vioscreen_isomalt
Unknown
vioscreen_joules
Unknown
vioscreen_juice_servings
Unknown
vioscreen_lactitol
Unknown
vioscreen_lactose
Unknown
vioscreen_legumes
Unknown
vioscreen_leucine
Unknown
vioscreen_line_gi
Unknown
vioscreen_low_fat_dairy_serving
Unknown
vioscreen_lutzeax
Unknown
vioscreen_lycopene
Unknown
vioscreen_lysine
Unknown
vioscreen_m_egg
Unknown
vioscreen_m_fish_hi
Unknown
vioscreen_m_fish_lo
Unknown
vioscreen_m_frank
Unknown
vioscreen_m_meat
Unknown
vioscreen_m_mpf
Unknown
vioscreen_m_nutsd
Unknown
vioscreen_m_organ
Unknown
vioscreen_m_poult
Unknown
vioscreen_m_soy
Unknown
vioscreen_magnes
Unknown
vioscreen_maltitol
Unknown
vioscreen_maltose
Unknown
vioscreen_mangan
Unknown
vioscreen_mannitol
Unknown
vioscreen_methhis3
Unknown
vioscreen_methion
Unknown
vioscreen_mfa141
Unknown
vioscreen_mfa161
Unknown
vioscreen_mfa181
Unknown
vioscreen_mfa201
Unknown
vioscreen_mfa221
Unknown
vioscreen_mfatot
Unknown
vioscreen_multi_calcium_avg
Unknown
vioscreen_multi_calcium_dose
Unknown
vioscreen_multivitamin
Unknown
vioscreen_multivitamin_freq
Unknown
vioscreen_natoco
Unknown
vioscreen_nccglbr
Unknown
vioscreen_nccglgr
Unknown
vioscreen_niacin
Unknown
vioscreen_niacineq
Unknown
vioscreen_nitrogen
Unknown
vioscreen_non_fried_fish_servings
Unknown
vioscreen_nutrient_recommendation
Unknown
vioscreen_omega3
Unknown
vioscreen_oxalic
Unknown
vioscreen_oxalicm
Unknown
vioscreen_pantothe
Unknown
vioscreen_pectins
Unknown
vioscreen_pfa182
Unknown
vioscreen_pfa183
Unknown
vioscreen_pfa184
Unknown
vioscreen_pfa204
Unknown
vioscreen_pfa205
Unknown
vioscreen_pfa225
Unknown
vioscreen_pfa226
Unknown
vioscreen_pfatot
Unknown
vioscreen_phenylal
Unknown
vioscreen_phosphor
Unknown
vioscreen_phytic
Unknown
vioscreen_pinitol
Unknown
vioscreen_potass
Unknown
vioscreen_procdate
Unknown
vioscreen_proline
Unknown
vioscreen_protanim
Unknown
vioscreen_protein
Unknown
vioscreen_protocol
Unknown
vioscreen_protveg
Unknown
vioscreen_questionnaire
Unknown
vioscreen_recno
Unknown
vioscreen_retinol
Unknown
vioscreen_rgrain
Unknown
vioscreen_ribofla
Unknown
vioscreen_sacchar
Unknown
vioscreen_salad_vegetable_servings
Unknown
vioscreen_satoco
Unknown
vioscreen_scf
Unknown
vioscreen_scfv
Unknown
vioscreen_selenium
Unknown
vioscreen_serine
Unknown
vioscreen_sfa100
Unknown
vioscreen_sfa120
Unknown
vioscreen_sfa140
Unknown
vioscreen_sfa160
Unknown
vioscreen_sfa170
Unknown
vioscreen_sfa180
Unknown
vioscreen_sfa200
Unknown
vioscreen_sfa220
Unknown
vioscreen_sfa40
Unknown
vioscreen_sfa60
Unknown
vioscreen_sfa80
Unknown
vioscreen_sfatot
Unknown
vioscreen_sodium
Unknown
vioscreen_sorbitol
Unknown
vioscreen_srvid
Unknown
vioscreen_starch
Unknown
vioscreen_started
Unknown
vioscreen_subject_id
Unknown
vioscreen_sucpoly
Unknown
vioscreen_sucrlose
Unknown
vioscreen_sucrose
Unknown
vioscreen_sweet_servings
Unknown
vioscreen_tagatose
Unknown
vioscreen_tfa161t
Unknown
vioscreen_tfa181t
Unknown
vioscreen_tfa182t
Unknown
vioscreen_tgrain
Unknown
vioscreen_thiamin
Unknown
vioscreen_threonin
Unknown
vioscreen_time
Unknown
vioscreen_totaltfa
Unknown
vioscreen_totcla
Unknown
vioscreen_totfolat
Unknown
vioscreen_totsugar
Unknown
vioscreen_tryptoph
Unknown
vioscreen_tyrosine
Unknown
vioscreen_user_id
Unknown
vioscreen_v_drkgr
Unknown
vioscreen_v_orange
Unknown
vioscreen_v_other
Unknown
vioscreen_v_potato
Unknown
vioscreen_v_starcy
Unknown
vioscreen_v_tomato
Unknown
vioscreen_v_total
Unknown
vioscreen_valine
Unknown
vioscreen_veg5_day
Unknown
vioscreen_vegetable_servings
Unknown
vioscreen_vegsumm
Unknown
vioscreen_visit
Unknown
vioscreen_vita_iu
Unknown
vioscreen_vita_rae
Unknown
vioscreen_vita_re
Unknown
vioscreen_vitb12
Unknown
vioscreen_vitb6
Unknown
vioscreen_vitc
Unknown
vioscreen_vitd
Unknown
vioscreen_vitd2
Unknown
vioscreen_vitd3
Unknown
vioscreen_vitd_iu
Unknown
vioscreen_vite_iu
Unknown
vioscreen_vitk
Unknown
vioscreen_water
Unknown
vioscreen_weight
Unknown
vioscreen_wgrain
Unknown
vioscreen_whole_grain_servings
Unknown
vioscreen_xylitol
Unknown
vioscreen_zinc
Unknown
vitamin_b_supplement_frequency
Daily
vitamin_d_supplement_frequency
Daily
vivid_dreams
Rarely (a few times/month)
weight kg
63
weight_cat
Unknown
weight_change
Increased more than 10 pounds
weight_units
kilograms
whole_eggs
Occasionally (1-2 times/week)
whole_grain_frequency
Occasionally (1-2 times/week)