American Gut Project; 10317.000051252
human gut metagenome
American Gut Project Stool sample
ENA-FIRST-PUBLIC
2018-05-12T17:02:51Z
ENA-LAST-UPDATE
2018-05-11T22:20:46Z
External Id
SAMEA4662195
INSDC center name
UCSDMI
INSDC first public
2018-05-12T17:02:51Z
INSDC last update
2018-05-11T22:20:46Z
INSDC status
public
Submitter Id
qiita_sid_10317:10317.000051252
acid_reflux
I do not have this condition
acne medication
No
acne_medication_otc
No
add_adhd
Diagnosed by an alternative medicine practitioner
age cat
30s
age years
32
age_corrected
32.0
alcohol consumption
Yes
alcohol_frequency
Occasionally (1-2 times/week)
alcohol_types
Unspecified
alcohol_types_beercider
No
alcohol_types_red_wine
Yes
alcohol_types_sour_beers
No
alcohol_types_spiritshard_alcohol
No
alcohol_types_unspecified
No
alcohol_types_white_wine
No
allergic to i have no food allergies that i know of
No
allergic_to
Unspecified
allergic_to_other
No
allergic_to_peanuts
No
allergic_to_shellfish
No
allergic_to_tree_nuts
No
allergic_to_unspecified
Yes
alzheimers
I do not have this condition
anonymized name
000051252
antibiotic_history
6 months
appendix_removed
No
artificial_sweeteners
Never
asd
Unspecified
assigned_from_geo
Yes
autoimmune
I do not have this condition
birth year
1985
bmi
16.99
bmi_cat
Underweight
bmi_corrected
16.99
body habitat
UBERON:feces
body product
UBERON:feces
body site
UBERON:feces
bowel_movement_frequency
Unspecified
bowel_movement_quality
I tend to have normal formed stool - Type 3 and 4
breastmilk_formula_ensure
No
cancer
Unspecified
cancer treatment
Unspecified
cardiovascular_disease
Unspecified
cat
No
cdiff
Unspecified
census_region
West
chickenpox
Yes
clinical condition
Diagnosed by a medical professional (doctor, physician assistant)
collection date
03/06/2018
collection month
March
collection season
Spring
collection time
14:50
collection_timestamp
03/06/2018 14:50
consume_animal_products_abx
Not sure
contraceptive
No
cosmetics_frequency
Regularly (3-5 times/week)
country
USA
country of birth
Bangladesh
country_residence
United States
csection
Yes
deodorant_use
I do not use deodorant or an antiperspirant
depression_bipolar_schizophrenia
Unspecified
diabetes
I do not have this condition
diabetes type
Unspecified
diet type
Omnivore
dna_extracted
Yes
dog
No
dominant hand
I am right handed
drinking_water_source
City
drinks_per_session
Unspecified
economic_region
Far West
elevation
57.1
env biome
dense settlement biome
env feature
human-associated habitat
env package
human-gut
env_material
feces
epilepsy_or_seizure_disorder
I do not have this condition
exercise_frequency
Rarely (a few times/month)
exercise_location
Both
fed_as_infant
Primarily breast milk
fermented_plant_frequency
Rarely (less than once/week)
flossing_frequency
Occasionally (1-2 times/week)
flu_vaccine_date
I have not gotten the flu vaccine in the past year.
frozen_dessert_frequency
Rarely (less than once/week)
fruit_frequency
Rarely (less than once/week)
fungal_overgrowth
Unspecified
geo loc name
USA:CA
gluten
Unspecified
height cm
152
height_units
centimeters
high_fat_red_meat_frequency
Rarely (less than once/week)
homecooked_meals_frequency
Occasionally (1-2 times/week)
host
0190fcd38b2e7f18bb55005efac27527a4f0eaca2cf1c75174b31f4bd113f82ba964204cd2bb54e60c2b35c2e7cf7329baed4c5ffdef16cda966864cabea1757
host common name
human
host taxid
9606
ibd
Unspecified
ibd diagnosis
Unspecified
ibd_diagnosis_refined
Unspecified
ibs
Diagnosed by a medical professional (doctor, physician assistant)
kidney_disease
I do not have this condition
lactose
Yes
last_move
Within the past year
last_travel
3 months
latitude
37.8
level_of_education
Graduate or Professional degree
liver_disease
I do not have this condition
livingwith
No
longitude
-122.4
lowgrain_diet_type
No
lung disease
I do not have this condition
meat_eggs_frequency
Daily
mental_illness
No
mental_illness_type
Unspecified
mental_illness_type_anorexia_nervosa
No
mental_illness_type_bipolar_disorder
No
mental_illness_type_bulimia_nervosa
No
mental_illness_type_depression
No
mental_illness_type_ptsd_posttraumatic_stress_disorder
No
mental_illness_type_schizophrenia
No
mental_illness_type_substance_abuse
No
mental_illness_type_unspecified
Yes
migraine
Unspecified
milk_cheese_frequency
Regularly (3-5 times/week)
milk_substitute_frequency
Occasionally (1-2 times/week)
multivitamin
No
nail_biter
No
non_food_allergies
Unspecified
non_food_allergies_beestings
Yes
non_food_allergies_drug_eg_penicillin
Yes
non_food_allergies_pet_dander
Yes
non_food_allergies_poison_ivyoak
No
non_food_allergies_sun
No
non_food_allergies_unspecified
No
olive_oil
Occasionally (1-2 times/week)
one_liter_of_water_a_day_frequency
Occasionally (1-2 times/week)
other_supplement_frequency
No
pets_other
Yes
physical_specimen_location
UCSDMI
physical_specimen_remaining
Yes
pku
I do not have this condition
pool_frequency
Never
poultry_frequency
Occasionally (1-2 times/week)
pregnant
No
prepared_meals_frequency
Regularly (3-5 times/week)
probiotic_frequency
Rarely (a few times/month)
public
Yes
race
Asian or Pacific Islander
ready_to_eat_meals_frequency
Rarely (less than once/week)
red_meat_frequency
Occasionally (1-2 times/week)
roommates
One
roommates_in_study
Yes
salted_snacks_frequency
Rarely (less than once/week)
sample name
qiita_sid_10317:10317.000051252
sample type
Stool
scientific_name
human gut metagenome
seafood_frequency
Rarely (less than once/week)
seasonal_allergies
Unspecified
sex
female
sibo
Unspecified
skin_condition
Unspecified
sleep_duration
8 or more hours
smoking_frequency
Never
softener
No
specialized_diet
Unspecified
specialized_diet_exclude_dairy
Unspecified
specialized_diet_exclude_nightshades
Unspecified
specialized_diet_exclude_refined_sugars
Unspecified
specialized_diet_fodmap
Unspecified
specialized_diet_halaal
Unspecified
specialized_diet_i_do_not_eat_a_specialized_diet
Unspecified
specialized_diet_kosher
Unspecified
specialized_diet_modified_paleo_diet
Unspecified
specialized_diet_other_restrictions_not_described_here
Unspecified
specialized_diet_paleodiet_or_primal_diet
Unspecified
specialized_diet_raw_food_diet
Unspecified
specialized_diet_unspecified
Unspecified
specialized_diet_westenprice_or_other_lowgrain_low_processed_fo
Unspecified
state
CA
subset_age
True
subset_antibiotic_history
False
subset_bmi
False
subset_diabetes
True
subset_healthy
False
subset_ibd
False
sugar_sweetened_drink_frequency
Never
sugary_sweets_frequency
Regularly (3-5 times/week)
survey_id
aea4dd7a429ded43
teethbrushing_frequency
Daily
thyroid
I do not have this condition
tonsils_removed
No
types_of_plants
6 to 10
vegetable_frequency
Occasionally (1-2 times/week)
vitamin_b_supplement_frequency
Never
vitamin_d_supplement_frequency
Never
vivid_dreams
Occasionally (1-2 times/week)
weight kg
39
weight_change
Remained stable
weight_units
kilograms
whole_eggs
Occasionally (1-2 times/week)
whole_grain_frequency
Occasionally (1-2 times/week)