American Gut Project; 10317.000071461
human gut metagenome
American Gut Project Stool sample
ENA-FIRST-PUBLIC
2018-05-12T17:02:50Z
ENA-LAST-UPDATE
2018-05-12T06:15:37Z
External Id
SAMEA4662646
INSDC center name
UCSDMI
INSDC first public
2018-05-12T17:02:50Z
INSDC last update
2018-05-12T06:15:37Z
INSDC status
public
Submitter Id
qiita_sid_10317:10317.000071461
acid_reflux
Unspecified
acne medication
No
acne_medication_otc
No
add_adhd
Unspecified
age cat
60s
age years
62
age_corrected
62.0
alcohol consumption
Yes
alcohol_frequency
Rarely (a few times/month)
alcohol_types
Unspecified
alcohol_types_beercider
No
alcohol_types_red_wine
No
alcohol_types_sour_beers
No
alcohol_types_spiritshard_alcohol
No
alcohol_types_unspecified
Yes
alcohol_types_white_wine
No
allergic to i have no food allergies that i know of
No
allergic_to
Unspecified
allergic_to_other
No
allergic_to_peanuts
No
allergic_to_shellfish
No
allergic_to_tree_nuts
No
allergic_to_unspecified
Yes
alzheimers
Unspecified
anonymized name
000071461
antibiotic_history
I have not taken antibiotics in the past year.
appendix_removed
No
artificial_sweeteners
Unspecified
asd
Unspecified
assigned_from_geo
Yes
autoimmune
Unspecified
birth year
1955
bmi
23.36
bmi_cat
Normal
bmi_corrected
23.36
body habitat
UBERON:feces
body product
UBERON:feces
body site
UBERON:feces
bowel_movement_frequency
Unspecified
bowel_movement_quality
Unspecified
breastmilk_formula_ensure
Unspecified
cancer
Unspecified
cancer treatment
Unspecified
cardiovascular_disease
Unspecified
cat
No
cdiff
Unspecified
census_region
Northeast
chickenpox
Yes
clinical condition
Unspecified
collection date
07/11/2017
collection month
July
collection season
Summer
collection time
06:00
collection_timestamp
07/11/2017 06:00
consume_animal_products_abx
Unspecified
contraceptive
Unspecified
cosmetics_frequency
Never
country
USA
country of birth
United States
country_residence
Unspecified
csection
No
deodorant_use
I do not use deodorant or an antiperspirant
depression_bipolar_schizophrenia
Unspecified
diabetes
I do not have this condition
diabetes type
Unspecified
diet type
Omnivore
dna_extracted
Yes
dog
No
dominant hand
I am right handed
drinking_water_source
Filtered
drinks_per_session
Unspecified
economic_region
New England
elevation
12.3
env biome
dense settlement biome
env feature
human-associated habitat
env package
human-gut
env_material
feces
epilepsy_or_seizure_disorder
Unspecified
exercise_frequency
Unspecified
exercise_location
Outdoors
fed_as_infant
Unspecified
fermented_plant_frequency
Unspecified
flossing_frequency
Daily
flu_vaccine_date
I have not gotten the flu vaccine in the past year.
frozen_dessert_frequency
Unspecified
fruit_frequency
Unspecified
fungal_overgrowth
Unspecified
geo loc name
USA:MA
gluten
No
height cm
178
height_units
centimeters
high_fat_red_meat_frequency
Unspecified
homecooked_meals_frequency
Unspecified
host common name
human
host subject id
a677d6eed2a4bd9bcf48c93b7a1f56311c149d9bf39fadf4d041f53d9620001b23d4a2b6a4480d31c4527dd896272229cfaf9fb16efb73ad87582130751a1efe
host taxid
9606
ibd
I do not have this condition
ibd diagnosis
Unspecified
ibd_diagnosis_refined
Unspecified
ibs
Unspecified
kidney_disease
Unspecified
lactose
No
last_move
Unspecified
last_travel
I have not been outside of my country of residence in the past year.
latitude
41.6
level_of_education
Unspecified
liver_disease
Unspecified
livingwith
Yes
longitude
-70.6
lowgrain_diet_type
Unspecified
lung disease
I do not have this condition
meat_eggs_frequency
Unspecified
mental_illness
Unspecified
mental_illness_type
Unspecified
mental_illness_type_anorexia_nervosa
Unspecified
mental_illness_type_bipolar_disorder
Unspecified
mental_illness_type_bulimia_nervosa
Unspecified
mental_illness_type_depression
Unspecified
mental_illness_type_ptsd_posttraumatic_stress_disorder
Unspecified
mental_illness_type_schizophrenia
Unspecified
mental_illness_type_substance_abuse
Unspecified
mental_illness_type_unspecified
Unspecified
migraine
I do not have this condition
milk_cheese_frequency
Unspecified
milk_substitute_frequency
Unspecified
multivitamin
Yes
nail_biter
Yes
non_food_allergies
Unspecified
non_food_allergies_beestings
No
non_food_allergies_drug_eg_penicillin
No
non_food_allergies_pet_dander
No
non_food_allergies_poison_ivyoak
No
non_food_allergies_sun
No
non_food_allergies_unspecified
Yes
olive_oil
Unspecified
one_liter_of_water_a_day_frequency
Unspecified
other_supplement_frequency
Yes
pets_other
Unspecified
physical_specimen_location
UCSDMI
physical_specimen_remaining
Yes
pku
I do not have this condition
pool_frequency
Never
poultry_frequency
Unspecified
pregnant
Unspecified
prepared_meals_frequency
Unspecified
probiotic_frequency
Unspecified
public
Yes
race
Caucasian
ready_to_eat_meals_frequency
Unspecified
red_meat_frequency
Unspecified
roommates
Unspecified
roommates_in_study
Unspecified
salted_snacks_frequency
Unspecified
sample name
qiita_sid_10317:10317.000071461
sample type
Stool
scientific_name
human gut metagenome
seafood_frequency
Unspecified
seasonal_allergies
No
sex
male
sibo
Unspecified
skin_condition
I do not have this condition
sleep_duration
7-8 hours
smoking_frequency
Never
softener
No
specialized_diet
Unspecified
specialized_diet_exclude_dairy
Unspecified
specialized_diet_exclude_nightshades
Unspecified
specialized_diet_exclude_refined_sugars
Unspecified
specialized_diet_fodmap
Unspecified
specialized_diet_halaal
Unspecified
specialized_diet_i_do_not_eat_a_specialized_diet
Unspecified
specialized_diet_kosher
Unspecified
specialized_diet_modified_paleo_diet
Unspecified
specialized_diet_other_restrictions_not_described_here
Unspecified
specialized_diet_paleodiet_or_primal_diet
Unspecified
specialized_diet_raw_food_diet
Unspecified
specialized_diet_unspecified
Unspecified
specialized_diet_westenprice_or_other_lowgrain_low_processed_fo
Unspecified
state
MA
subset_age
True
subset_antibiotic_history
True
subset_bmi
True
subset_diabetes
True
subset_healthy
True
subset_ibd
True
sugar_sweetened_drink_frequency
Unspecified
sugary_sweets_frequency
Unspecified
survey_id
5a79df98122965b9
teethbrushing_frequency
Daily
thyroid
Unspecified
tonsils_removed
No
types_of_plants
11 to 20
vegetable_frequency
Unspecified
vitamin_b_supplement_frequency
Unspecified
vitamin_d_supplement_frequency
Unspecified
vivid_dreams
Unspecified
weight kg
74
weight_change
Unspecified
weight_units
kilograms
whole_eggs
Unspecified
whole_grain_frequency
Unspecified