human metagenome
strain
not applicable
isolate
not applicable
host
Homo sapiens
isolation_source
Penis
collection_date
missing
geo_loc_name
South Africa: Cape Town
sample_type
Penile swab
genotype
bacteria
altitude
not applicable
lat_lon
not applicable
LibraryID
P-Library2-50_S46_L001
LibraryNo
P-Library2
barcode_sequence
CGAGGCTGAGAGTAGA
linker_primer_sequence
CCTACGGGNGGCWGCAG
reverse_primer
GACTACHVGGGTATCTAATCC
Age
54
HIV
y
arv
1
arvtype2
3TC, D4T, Efavirenz
female.part
no.part
married
2
regsex
5
partreg
1
livetog
2
age1sex
18
lifeparts
5
sex1month
5
contracep
1
nowcondom
1
circumsized
1
cigs
2
discharge
2
discharge2
not applicable
ulcer
2
pap
n
CD4
192
HPV
positive
HPV types (Roche Genotyping)
31, 35, 53, 54, 73
Low B globin
positive
High B globin
positive
BioSampleModel
Metagenome or environmental