TARA_E500000082
marine metagenome
Alias
TARA_E500000082
Chlorophyll Sensor
0.0599
Citation
tbd
Depth
55
Description
This sample (TARA_E500000082) was collected in the marine biome (ENVO:00000447) during Tara Oceans expedition on date/time=2009-11-18T13:50Z at station TARA_023 (latitudeN=42.1735, longitudeE=17.7252) from a deep chlorophyll maximum layer (ENVO:xxxxxxxx) at a depth of 53-57 m, using a PUMP (High Volume Peristaltic Pump) with ECOTriplet. The sample material (saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)) was size-fractionated (<-0.22 micrometres) and preserved on board in liquid nitrogen for later phylogenetic analysis of virus nucleotide sequences identification by pyrosequencing methods.
ENA checklist
ERC000030
Environment (Biome)
marine biome (ENVO:00000447)
Environment (Feature)
deep chlorophyll maximum layer (ENVO:xxxxxxxx)
Environment (Material)
saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Environmental Package
water
Event Date/Time End
2009-11-18T15:46Z
Event Date/Time Start
2009-11-18T13:50Z
Event Label
TARA_20091118T1240Z_023_EVENT_PUMP
Further Details
tbd
INSDC center alias
GSC
INSDC center name
Genoscope
INSDC first public
2014-09-05T17:01:02Z
INSDC last update
2014-11-06T09:09:25Z
INSDC status
public
Last Update Date
2014-05-01Z
Latitude End
42.1659
Latitude Start
42.1735
Longitude End
17.7285
Longitude Start
17.7252
Marine Region
(search radius=5 degree) Marine Ecoregion:Adriatic Sea (MRGID:3314), Marine Ecoregion:Ionian Sea (MRGID:3351)
Nitrate Sensor
99999
Oxygen Sensor
224.786708
Project Name
Tara Oceans
Protocol Label
VIRUS_NUC-DNA-Fe(20L)_W<-0.22
SRA accession
ERS478007
Salinity Sensor
38.472729
Sample Collection Device
PUMP (High Volume Peristaltic Pump) with ECOTriplet
Sample Name
ERS478007
Sample Status
This version is NOT FINAL but can be used to provide data discovery services
Sampling Campaign
TARA_20091111Z
Sampling Platform
SV Tara
Sampling Station
TARA_023
Size Fraction Lower Threshold
<
Size Fraction Upper Threshold
0.22
Temperature
15.194062
Title
TARA_20091118T1240Z_023_EVENT_PUMP_P_D_(55-57m)_VIRUS_NUC-DNA-Fe(20L)_W<-0.22_TARA_E500000082