American Gut Project; 10317.000030688
human gut metagenome
American Gut Project Stool sample
ENA-FIRST-PUBLIC
2018-05-12T17:02:50Z
ENA-LAST-UPDATE
2018-05-12T06:15:13Z
External Id
SAMEA4662453
INSDC center name
UCSDMI
INSDC first public
2018-05-12T17:02:50Z
INSDC last update
2018-05-12T06:15:13Z
INSDC status
public
Submitter Id
qiita_sid_10317:10317.000030688
acid_reflux
Unspecified
acne medication
No
acne_medication_otc
No
add_adhd
I do not have this condition
age cat
40s
age years
45
age_corrected
45.0
alcohol consumption
Yes
alcohol_frequency
Rarely (a few times/month)
alcohol_types
Unspecified
alcohol_types_beercider
No
alcohol_types_red_wine
No
alcohol_types_sour_beers
No
alcohol_types_spiritshard_alcohol
No
alcohol_types_unspecified
No
alcohol_types_white_wine
Yes
allergic to i have no food allergies that i know of
Yes
allergic_to
Unspecified
allergic_to_other
No
allergic_to_peanuts
No
allergic_to_shellfish
No
allergic_to_tree_nuts
No
allergic_to_unspecified
No
alzheimers
I do not have this condition
anonymized name
000030688
antibiotic_history
Year
appendix_removed
No
artificial_sweeteners
Unspecified
asd
I do not have this condition
assigned_from_geo
Yes
autoimmune
I do not have this condition
birth year
1969
bmi
20.83
bmi_cat
Normal
bmi_corrected
20.83
body habitat
UBERON:feces
body product
UBERON:feces
body site
UBERON:feces
bowel_movement_frequency
One
bowel_movement_quality
I tend to have normal formed stool - Type 3 and 4
breastmilk_formula_ensure
No
cancer
Unspecified
cancer treatment
Unspecified
cardiovascular_disease
I do not have this condition
cat
No
cdiff
I do not have this condition
census_region
Unspecified
chickenpox
Yes
clinical condition
I do not have this condition
collection date
2015-09-15
collection month
September
collection season
Fall
collection time
12:45
collection_timestamp
09/15/2015 12:45
consume_animal_products_abx
No
contraceptive
No
cosmetics_frequency
Occasionally (1-2 times/week)
country
United Kingdom
country of birth
United Kingdom
country_residence
Unspecified
csection
Yes
deodorant_use
I do not use deodorant or an antiperspirant
depression_bipolar_schizophrenia
I do not have this condition
diabetes
Diagnosed by a medical professional (doctor, physician assistant)
diabetes type
Unspecified
diet type
Vegetarian but eat seafood
dna_extracted
Yes
dog
Yes
dominant hand
I am right handed
drinking_water_source
City
drinks_per_session
Unspecified
economic_region
Unspecified
elevation
Unspecified
env biome
dense settlement biome
env feature
human-associated habitat
env package
human-gut
env_material
feces
epilepsy_or_seizure_disorder
I do not have this condition
exercise_frequency
Rarely (a few times/month)
exercise_location
Depends on the season
fed_as_infant
Not sure
fermented_plant_frequency
Daily
flossing_frequency
Daily
flu_vaccine_date
I have not gotten the flu vaccine in the past year.
frozen_dessert_frequency
Rarely (less than once/week)
fruit_frequency
Regularly (3-5 times/week)
fungal_overgrowth
Self-diagnosed
geo loc name
United Kingdom:Unspecified
gluten
No
height cm
178
height_units
centimeters
high_fat_red_meat_frequency
Never
homecooked_meals_frequency
Daily
host common name
human
host subject id
70de18a341c426f756ddf11c51847d18bcfa2efa54dd78c5b2c81678307f4f51f38f567bf7e2fc222cdcac6d5ef5f75348b26e3ba21110c966a5e3944adda143
host taxid
9606
ibd
I do not have this condition
ibd diagnosis
Unspecified
ibd_diagnosis_refined
Unspecified
ibs
I do not have this condition
kidney_disease
I do not have this condition
lactose
Yes
last_move
Within the past year
last_travel
1 year
latitude
Unspecified
level_of_education
Some graduate school or professional
liver_disease
I do not have this condition
livingwith
Yes
longitude
Unspecified
lowgrain_diet_type
No
lung disease
Diagnosed by a medical professional (doctor, physician assistant)
meat_eggs_frequency
Regularly (3-5 times/week)
mental_illness
Unspecified
mental_illness_type
Unspecified
mental_illness_type_anorexia_nervosa
Unspecified
mental_illness_type_bipolar_disorder
Unspecified
mental_illness_type_bulimia_nervosa
Unspecified
mental_illness_type_depression
Unspecified
mental_illness_type_ptsd_posttraumatic_stress_disorder
Unspecified
mental_illness_type_schizophrenia
Unspecified
mental_illness_type_substance_abuse
Unspecified
mental_illness_type_unspecified
Unspecified
migraine
I do not have this condition
milk_cheese_frequency
Occasionally (1-2 times/week)
milk_substitute_frequency
Occasionally (1-2 times/week)
multivitamin
No
nail_biter
No
non_food_allergies
Unspecified
non_food_allergies_beestings
No
non_food_allergies_drug_eg_penicillin
No
non_food_allergies_pet_dander
Yes
non_food_allergies_poison_ivyoak
No
non_food_allergies_sun
No
non_food_allergies_unspecified
No
olive_oil
Occasionally (1-2 times/week)
one_liter_of_water_a_day_frequency
Rarely (less than once/week)
other_supplement_frequency
No
pets_other
Unspecified
physical_specimen_location
UCSDMI
physical_specimen_remaining
Yes
pku
I do not have this condition
pool_frequency
Never
poultry_frequency
Never
pregnant
No
prepared_meals_frequency
Occasionally (1-2 times/week)
probiotic_frequency
Never
public
Yes
race
Caucasian
ready_to_eat_meals_frequency
Never
red_meat_frequency
Never
roommates
One
roommates_in_study
No
salted_snacks_frequency
Regularly (3-5 times/week)
sample name
qiita_sid_10317:10317.000030688
sample type
Stool
scientific_name
human gut metagenome
seafood_frequency
Never
seasonal_allergies
Yes
sex
female
sibo
I do not have this condition
skin_condition
I do not have this condition
sleep_duration
6-7 hours
smoking_frequency
Never
softener
Yes
specialized_diet
Unspecified
specialized_diet_exclude_dairy
Unspecified
specialized_diet_exclude_nightshades
Unspecified
specialized_diet_exclude_refined_sugars
Unspecified
specialized_diet_fodmap
Unspecified
specialized_diet_halaal
Unspecified
specialized_diet_i_do_not_eat_a_specialized_diet
Unspecified
specialized_diet_kosher
Unspecified
specialized_diet_modified_paleo_diet
Unspecified
specialized_diet_other_restrictions_not_described_here
Unspecified
specialized_diet_paleodiet_or_primal_diet
Unspecified
specialized_diet_raw_food_diet
Unspecified
specialized_diet_unspecified
Unspecified
specialized_diet_westenprice_or_other_lowgrain_low_processed_fo
Unspecified
state
Unspecified
subset_age
True
subset_antibiotic_history
False
subset_bmi
True
subset_diabetes
False
subset_healthy
False
subset_ibd
True
sugar_sweetened_drink_frequency
Occasionally (1-2 times/week)
sugary_sweets_frequency
Regularly (3-5 times/week)
survey_id
86873c8d962c1411
teethbrushing_frequency
Daily
thyroid
I do not have this condition
tonsils_removed
No
types_of_plants
Unspecified
vegetable_frequency
Daily
vitamin_b_supplement_frequency
Never
vitamin_d_supplement_frequency
Never
vivid_dreams
Unspecified
weight kg
66
weight_change
Decreased more than 10 pounds
weight_units
kilograms
whole_eggs
Regularly (3-5 times/week)
whole_grain_frequency
Regularly (3-5 times/week)