American Gut Project; 10317.000071538
human oral metagenome
American Gut Project Mouth sample
ENA-FIRST-PUBLIC
2018-05-12T17:02:50Z
ENA-LAST-UPDATE
2018-05-12T06:15:38Z
External Id
SAMEA4662652
INSDC center name
UCSDMI
INSDC first public
2018-05-12T17:02:50Z
INSDC last update
2018-05-12T06:15:38Z
INSDC status
public
Submitter Id
qiita_sid_10317:10317.000071538
acid_reflux
Unspecified
acne medication
No
acne_medication_otc
No
add_adhd
I do not have this condition
age cat
40s
age years
44
age_corrected
44.0
alcohol consumption
Yes
alcohol_frequency
Daily
alcohol_types
Unspecified
alcohol_types_beercider
No
alcohol_types_red_wine
Yes
alcohol_types_sour_beers
No
alcohol_types_spiritshard_alcohol
Yes
alcohol_types_unspecified
No
alcohol_types_white_wine
Yes
allergic to i have no food allergies that i know of
No
allergic_to
Unspecified
allergic_to_other
No
allergic_to_peanuts
No
allergic_to_shellfish
No
allergic_to_tree_nuts
No
allergic_to_unspecified
Yes
alzheimers
I do not have this condition
anonymized name
000071538
antibiotic_history
6 months
appendix_removed
No
artificial_sweeteners
Regularly (3-5 times/week)
asd
I do not have this condition
assigned_from_geo
Yes
autoimmune
I do not have this condition
birth year
1973
bmi
28.40
bmi_cat
Overweight
bmi_corrected
28.40
body habitat
UBERON:oral cavity
body product
UBERON:saliva
body site
UBERON:tongue
bowel_movement_frequency
One
bowel_movement_quality
I tend to have diarrhea (watery stool) - Type 5, 6 and 7
breastmilk_formula_ensure
No
cancer
Unspecified
cancer treatment
Unspecified
cardiovascular_disease
I do not have this condition
cat
Yes
cdiff
Unspecified
census_region
Unspecified
chickenpox
Yes
clinical condition
Unspecified
collection date
2017-05-19
collection month
May
collection season
Spring
collection time
08:00
collection_timestamp
05/19/2017 08:00
consume_animal_products_abx
Yes
contraceptive
No
cosmetics_frequency
Occasionally (1-2 times/week)
country
United Kingdom
country of birth
South Africa
country_residence
United Kingdom
csection
No
deodorant_use
Not sure, but I use some form of deodorant/antiperspirant
depression_bipolar_schizophrenia
Unspecified
diabetes
I do not have this condition
diabetes type
Unspecified
diet type
Omnivore
dna_extracted
Yes
dog
No
dominant hand
I am left handed
drinking_water_source
City
drinks_per_session
4+
economic_region
Unspecified
elevation
Unspecified
env biome
dense settlement biome
env feature
human-associated habitat
env package
human-oral
env_material
saliva
epilepsy_or_seizure_disorder
I do not have this condition
exercise_frequency
Rarely (a few times/month)
exercise_location
Both
fed_as_infant
A mixture of breast milk and formula
fermented_plant_frequency
Occasionally (1-2 times/week)
flossing_frequency
Occasionally (1-2 times/week)
flu_vaccine_date
Year
frozen_dessert_frequency
Rarely (less than once/week)
fruit_frequency
Occasionally (1-2 times/week)
fungal_overgrowth
Self-diagnosed
geo loc name
United Kingdom:Unspecified
gluten
Unspecified
height cm
180
height_units
centimeters
high_fat_red_meat_frequency
Occasionally (1-2 times/week)
homecooked_meals_frequency
Regularly (3-5 times/week)
host common name
human
host subject id
1969d82b4db229ccb24fe92aa958eed2100448195358c02fe1a9aa1f9b18735147afef258308d9a4c71f7a01be03d42cddc780b044bf090da138e52bb6f1b8c1
host taxid
9606
ibd
Unspecified
ibd diagnosis
Unspecified
ibd_diagnosis_refined
Unspecified
ibs
Self-diagnosed
kidney_disease
I do not have this condition
lactose
Unspecified
last_move
I have lived in my current state of residence for more than a year.
last_travel
6 months
latitude
Unspecified
level_of_education
Associate's degree
liver_disease
Unspecified
livingwith
No
longitude
Unspecified
lowgrain_diet_type
Unspecified
lung disease
I do not have this condition
meat_eggs_frequency
Regularly (3-5 times/week)
mental_illness
Yes
mental_illness_type
Unspecified
mental_illness_type_anorexia_nervosa
No
mental_illness_type_bipolar_disorder
No
mental_illness_type_bulimia_nervosa
No
mental_illness_type_depression
Yes
mental_illness_type_ptsd_posttraumatic_stress_disorder
No
mental_illness_type_schizophrenia
No
mental_illness_type_substance_abuse
Yes
mental_illness_type_unspecified
No
migraine
I do not have this condition
milk_cheese_frequency
Regularly (3-5 times/week)
milk_substitute_frequency
Rarely (less than once/week)
multivitamin
Yes
nail_biter
No
non_food_allergies
Unspecified
non_food_allergies_beestings
No
non_food_allergies_drug_eg_penicillin
No
non_food_allergies_pet_dander
No
non_food_allergies_poison_ivyoak
No
non_food_allergies_sun
No
non_food_allergies_unspecified
Yes
olive_oil
Occasionally (1-2 times/week)
one_liter_of_water_a_day_frequency
Daily
other_supplement_frequency
Yes
pets_other
No
physical_specimen_location
UCSDMI
physical_specimen_remaining
Yes
pku
Unspecified
pool_frequency
Occasionally (1-2 times/week)
poultry_frequency
Daily
pregnant
No
prepared_meals_frequency
Rarely (less than once/week)
probiotic_frequency
Rarely (a few times/month)
public
Yes
race
Caucasian
ready_to_eat_meals_frequency
Regularly (3-5 times/week)
red_meat_frequency
Regularly (3-5 times/week)
roommates_in_study
No
salted_snacks_frequency
Regularly (3-5 times/week)
sample name
qiita_sid_10317:10317.000071538
sample type
Mouth
scientific_name
human oral metagenome
seafood_frequency
Rarely (less than once/week)
seasonal_allergies
Yes
sex
female
sibo
Unspecified
skin_condition
Unspecified
sleep_duration
7-8 hours
smoking_frequency
Never
softener
No
specialized_diet
Unspecified
specialized_diet_exclude_dairy
No
specialized_diet_exclude_nightshades
No
specialized_diet_exclude_refined_sugars
No
specialized_diet_fodmap
No
specialized_diet_halaal
No
specialized_diet_i_do_not_eat_a_specialized_diet
No
specialized_diet_kosher
No
specialized_diet_modified_paleo_diet
No
specialized_diet_other_restrictions_not_described_here
No
specialized_diet_paleodiet_or_primal_diet
No
specialized_diet_raw_food_diet
No
specialized_diet_unspecified
Yes
specialized_diet_westenprice_or_other_lowgrain_low_processed_fo
No
state
Unspecified
subset_age
True
subset_antibiotic_history
False
subset_bmi
True
subset_diabetes
True
subset_healthy
False
subset_ibd
False
sugar_sweetened_drink_frequency
Rarely (less than once/week)
sugary_sweets_frequency
Regularly (3-5 times/week)
survey_id
a5462191591d9fb3
teethbrushing_frequency
Daily
thyroid
Unspecified
tonsils_removed
No
types_of_plants
6 to 10
vegetable_frequency
Occasionally (1-2 times/week)
vitamin_b_supplement_frequency
Rarely (a few times/month)
vitamin_d_supplement_frequency
Never
vivid_dreams
Occasionally (1-2 times/week)
weight kg
92
weight_change
Increased more than 10 pounds
weight_units
kilograms
whole_eggs
Rarely (less than once/week)
whole_grain_frequency
Occasionally (1-2 times/week)