American Gut Project; 10317.000039864
human gut metagenome
American Gut Project Stool sample
ENA-FIRST-PUBLIC
2018-05-12T17:02:51Z
ENA-LAST-UPDATE
2018-05-11T22:20:46Z
External Id
SAMEA4662191
INSDC center name
UCSDMI
INSDC first public
2018-05-12T17:02:51Z
INSDC last update
2018-05-11T22:20:46Z
INSDC status
public
Submitter Id
qiita_sid_10317:10317.000039864
acid_reflux
Diagnosed by a medical professional (doctor, physician assistant)
acne medication
No
acne_medication_otc
No
add_adhd
Diagnosed by a medical professional (doctor, physician assistant)
age cat
child
age years
12
age_corrected
12.0
alcohol consumption
No
alcohol_frequency
Never
alcohol_types
Unspecified
alcohol_types_beercider
No
alcohol_types_red_wine
No
alcohol_types_sour_beers
No
alcohol_types_spiritshard_alcohol
No
alcohol_types_unspecified
Yes
alcohol_types_white_wine
No
allergic to i have no food allergies that i know of
Yes
allergic_to
Unspecified
allergic_to_other
No
allergic_to_peanuts
No
allergic_to_shellfish
No
allergic_to_tree_nuts
No
allergic_to_unspecified
No
alzheimers
I do not have this condition
anonymized name
000039864
antibiotic_history
Month
appendix_removed
No
artificial_sweeteners
Unspecified
asd
Diagnosed by a medical professional (doctor, physician assistant)
assigned_from_geo
Yes
autoimmune
I do not have this condition
birth year
2005
bmi
16.52
bmi_cat
Underweight
bmi_corrected
16.52
body habitat
UBERON:feces
body product
UBERON:feces
body site
UBERON:feces
bowel_movement_frequency
Less than one
bowel_movement_quality
I tend to be constipated (have difficulty passing stool) - Type 1 and 2
breastmilk_formula_ensure
Unspecified
cancer
I do not have this condition
cancer treatment
Unspecified
cardiovascular_disease
I do not have this condition
cat
No
cdiff
I do not have this condition
census_region
Midwest
chickenpox
No
clinical condition
I do not have this condition
collection date
03/01/2018
collection month
March
collection season
Spring
collection time
17:30
collection_timestamp
03/01/2018 17:30
consume_animal_products_abx
Yes
contraceptive
No
cosmetics_frequency
Never
country
USA
country of birth
United States
country_residence
United States
csection
No
deodorant_use
I do not use deodorant or an antiperspirant
depression_bipolar_schizophrenia
Unspecified
diabetes
I do not have this condition
diabetes type
Unspecified
diet type
Omnivore
dna_extracted
Yes
dog
No
dominant hand
I am right handed
drinking_water_source
City
drinks_per_session
I don't drink
economic_region
Great Lakes
elevation
222.3
env biome
dense settlement biome
env feature
human-associated habitat
env package
human-gut
env_material
feces
epilepsy_or_seizure_disorder
I do not have this condition
exercise_frequency
Unspecified
exercise_location
Unspecified
fed_as_infant
A mixture of breast milk and formula
fermented_plant_frequency
Unspecified
flossing_frequency
Never
flu_vaccine_date
Year
frozen_dessert_frequency
Unspecified
fruit_frequency
Unspecified
fungal_overgrowth
I do not have this condition
geo loc name
USA:IL
gluten
No
height cm
134
height_units
centimeters
high_fat_red_meat_frequency
Unspecified
homecooked_meals_frequency
Unspecified
host
de47796686b0893c2877c2ed47188ebe2abe3b95ccdf74e1d254999204576a7e6a0ebbf48b4542c959dfd0a951942cd22ae11a6707a2437e5c8b01b1965a626d
host common name
human
host taxid
9606
ibd
I do not have this condition
ibd diagnosis
Unspecified
ibd_diagnosis_refined
Unspecified
ibs
I do not have this condition
kidney_disease
I do not have this condition
lactose
No
last_move
I have lived in my current state of residence for more than a year.
last_travel
Month
latitude
40.1
level_of_education
Did not complete high school
liver_disease
Diagnosed by a medical professional (doctor, physician assistant)
livingwith
Yes
longitude
-88.3
lowgrain_diet_type
Unspecified
lung disease
I do not have this condition
meat_eggs_frequency
Unspecified
mental_illness
Yes
mental_illness_type
Unspecified
mental_illness_type_anorexia_nervosa
No
mental_illness_type_bipolar_disorder
No
mental_illness_type_bulimia_nervosa
No
mental_illness_type_depression
No
mental_illness_type_ptsd_posttraumatic_stress_disorder
No
mental_illness_type_schizophrenia
No
mental_illness_type_substance_abuse
No
mental_illness_type_unspecified
Yes
migraine
I do not have this condition
milk_cheese_frequency
Unspecified
milk_substitute_frequency
Unspecified
multivitamin
Yes
nail_biter
Unspecified
non_food_allergies
Unspecified
non_food_allergies_beestings
No
non_food_allergies_drug_eg_penicillin
Yes
non_food_allergies_pet_dander
Yes
non_food_allergies_poison_ivyoak
No
non_food_allergies_sun
No
non_food_allergies_unspecified
No
olive_oil
Unspecified
one_liter_of_water_a_day_frequency
Unspecified
other_supplement_frequency
Yes
pets_other
Yes
physical_specimen_location
UCSDMI
physical_specimen_remaining
Yes
pku
I do not have this condition
pool_frequency
Rarely (a few times/month)
poultry_frequency
Unspecified
pregnant
No
prepared_meals_frequency
Unspecified
probiotic_frequency
Never
public
Yes
race
Caucasian
ready_to_eat_meals_frequency
Unspecified
red_meat_frequency
Unspecified
roommates_in_study
Unspecified
salted_snacks_frequency
Unspecified
sample name
qiita_sid_10317:10317.000039864
sample type
Stool
scientific_name
human gut metagenome
seafood_frequency
Unspecified
seasonal_allergies
Yes
sex
male
sibo
I do not have this condition
skin_condition
Diagnosed by a medical professional (doctor, physician assistant)
sleep_duration
8 or more hours
smoking_frequency
Never
softener
Yes
specialized_diet
Unspecified
specialized_diet_exclude_dairy
No
specialized_diet_exclude_nightshades
No
specialized_diet_exclude_refined_sugars
No
specialized_diet_fodmap
No
specialized_diet_halaal
No
specialized_diet_i_do_not_eat_a_specialized_diet
Yes
specialized_diet_kosher
No
specialized_diet_modified_paleo_diet
No
specialized_diet_other_restrictions_not_described_here
No
specialized_diet_paleodiet_or_primal_diet
No
specialized_diet_raw_food_diet
No
specialized_diet_unspecified
No
specialized_diet_westenprice_or_other_lowgrain_low_processed_fo
No
state
IL
subset_age
False
subset_antibiotic_history
False
subset_bmi
False
subset_diabetes
True
subset_healthy
False
subset_ibd
True
sugar_sweetened_drink_frequency
Unspecified
sugary_sweets_frequency
Unspecified
survey_id
222858e3af4d87a8
teethbrushing_frequency
Daily
thyroid
I do not have this condition
tonsils_removed
No
types_of_plants
Unspecified
vegetable_frequency
Unspecified
vitamin_b_supplement_frequency
Never
vitamin_d_supplement_frequency
Never
vivid_dreams
Rarely (a few times/month)
weight kg
29
weight_change
Remained stable
weight_units
kilograms
whole_eggs
Unspecified
whole_grain_frequency
Unspecified