American Gut Project; 10317.000065453
human gut metagenome
American Gut Project Stool sample
ENA-FIRST-PUBLIC
2018-05-12T17:02:50Z
ENA-LAST-UPDATE
2018-05-12T06:15:27Z
External Id
SAMEA4662547
INSDC center name
UCSDMI
INSDC first public
2018-05-12T17:02:50Z
INSDC last update
2018-05-12T06:15:27Z
INSDC status
public
Submitter Id
qiita_sid_10317:10317.000065453
acid_reflux
Unspecified
acne medication
Unspecified
acne_medication_otc
Unspecified
add_adhd
Unspecified
age cat
Unspecified
age years
4
age_corrected
Unspecified
alcohol consumption
Unspecified
alcohol_frequency
Unspecified
alcohol_types
Unspecified
alcohol_types_beercider
No
alcohol_types_red_wine
No
alcohol_types_sour_beers
No
alcohol_types_spiritshard_alcohol
No
alcohol_types_unspecified
Yes
alcohol_types_white_wine
No
allergic to i have no food allergies that i know of
No
allergic_to
Unspecified
allergic_to_other
Yes
allergic_to_peanuts
No
allergic_to_shellfish
No
allergic_to_tree_nuts
No
allergic_to_unspecified
No
alzheimers
Unspecified
anonymized name
000065453
antibiotic_history
Unspecified
appendix_removed
Unspecified
artificial_sweeteners
Unspecified
asd
Diagnosed by a medical professional (doctor, physician assistant)
assigned_from_geo
Yes
autoimmune
Unspecified
birth year
2013
bmi
Unspecified
bmi_cat
Unspecified
bmi_corrected
Unspecified
body habitat
UBERON:feces
body product
UBERON:feces
body site
UBERON:feces
bowel_movement_frequency
Two
bowel_movement_quality
I tend to have normal formed stool - Type 3 and 4
breastmilk_formula_ensure
Unspecified
cancer
Unspecified
cancer treatment
Unspecified
cardiovascular_disease
Unspecified
cat
Unspecified
cdiff
Unspecified
census_region
Unspecified
chickenpox
Unspecified
clinical condition
Unspecified
collection date
2017-06-30
collection month
June
collection season
Summer
collection time
08:50
collection_timestamp
06/30/2017 08:50
consume_animal_products_abx
Unspecified
contraceptive
Unspecified
cosmetics_frequency
Unspecified
country
United Kingdom
country of birth
Unspecified
country_residence
Unspecified
csection
Yes
deodorant_use
Unspecified
depression_bipolar_schizophrenia
Unspecified
diabetes
Unspecified
diabetes type
Unspecified
diet type
Unspecified
dna_extracted
Yes
dog
Unspecified
dominant hand
Unspecified
drinking_water_source
Filtered
drinks_per_session
Unspecified
economic_region
Unspecified
elevation
Unspecified
env biome
dense settlement biome
env feature
human-associated habitat
env package
human-gut
env_material
feces
epilepsy_or_seizure_disorder
Unspecified
exercise_frequency
Unspecified
exercise_location
Unspecified
fed_as_infant
Unspecified
fermented_plant_frequency
Unspecified
flossing_frequency
Unspecified
flu_vaccine_date
Unspecified
frozen_dessert_frequency
Unspecified
fruit_frequency
Unspecified
fungal_overgrowth
Unspecified
geo loc name
United Kingdom:Unspecified
gluten
Unspecified
height cm
Unspecified
height_units
centimeters
high_fat_red_meat_frequency
Unspecified
homecooked_meals_frequency
Unspecified
host common name
human
host subject id
53a7ab25540a7481ced6d6b5009dda712b125a6789f467f370059149948b8464d63f9732e03da4e225584ccff8961163e91e4abc6c9b36588704722bb7e704e9
host taxid
9606
ibd
Unspecified
ibd diagnosis
Unspecified
ibd_diagnosis_refined
Unspecified
ibs
Unspecified
kidney_disease
Unspecified
lactose
Unspecified
last_move
Unspecified
last_travel
I have not been outside of my country of residence in the past year.
latitude
Unspecified
level_of_education
Unspecified
liver_disease
Unspecified
livingwith
Unspecified
longitude
Unspecified
lowgrain_diet_type
Unspecified
lung disease
Unspecified
meat_eggs_frequency
Unspecified
mental_illness
Unspecified
mental_illness_type
Unspecified
mental_illness_type_anorexia_nervosa
No
mental_illness_type_bipolar_disorder
No
mental_illness_type_bulimia_nervosa
No
mental_illness_type_depression
No
mental_illness_type_ptsd_posttraumatic_stress_disorder
No
mental_illness_type_schizophrenia
No
mental_illness_type_substance_abuse
No
mental_illness_type_unspecified
Yes
migraine
Unspecified
milk_cheese_frequency
Unspecified
milk_substitute_frequency
Unspecified
multivitamin
Unspecified
nail_biter
Unspecified
non_food_allergies
Unspecified
non_food_allergies_beestings
No
non_food_allergies_drug_eg_penicillin
No
non_food_allergies_pet_dander
No
non_food_allergies_poison_ivyoak
No
non_food_allergies_sun
No
non_food_allergies_unspecified
Yes
olive_oil
Unspecified
one_liter_of_water_a_day_frequency
Unspecified
other_supplement_frequency
Unspecified
pets_other
Unspecified
physical_specimen_location
UCSDMI
physical_specimen_remaining
Yes
pku
Unspecified
pool_frequency
Unspecified
poultry_frequency
Unspecified
pregnant
Unspecified
prepared_meals_frequency
Unspecified
probiotic_frequency
Unspecified
public
Yes
race
Unspecified
ready_to_eat_meals_frequency
Unspecified
red_meat_frequency
Unspecified
roommates
Unspecified
roommates_in_study
Unspecified
salted_snacks_frequency
Unspecified
sample name
qiita_sid_10317:10317.000065453
sample type
Stool
scientific_name
human gut metagenome
seafood_frequency
Unspecified
seasonal_allergies
Yes
sex
male
sibo
Unspecified
skin_condition
Unspecified
sleep_duration
Unspecified
smoking_frequency
Unspecified
softener
Unspecified
specialized_diet
Unspecified
specialized_diet_exclude_dairy
No
specialized_diet_exclude_nightshades
No
specialized_diet_exclude_refined_sugars
No
specialized_diet_fodmap
No
specialized_diet_halaal
No
specialized_diet_i_do_not_eat_a_specialized_diet
Yes
specialized_diet_kosher
No
specialized_diet_modified_paleo_diet
No
specialized_diet_other_restrictions_not_described_here
No
specialized_diet_paleodiet_or_primal_diet
No
specialized_diet_raw_food_diet
No
specialized_diet_unspecified
No
specialized_diet_westenprice_or_other_lowgrain_low_processed_fo
No
state
Unspecified
subset_age
False
subset_antibiotic_history
False
subset_bmi
False
subset_diabetes
False
subset_healthy
False
subset_ibd
False
sugar_sweetened_drink_frequency
Unspecified
sugary_sweets_frequency
Unspecified
survey_id
062385305ef94b54
teethbrushing_frequency
Unspecified
thyroid
Unspecified
tonsils_removed
Unspecified
types_of_plants
Unspecified
vegetable_frequency
Unspecified
vitamin_b_supplement_frequency
Unspecified
vitamin_d_supplement_frequency
Unspecified
vivid_dreams
Unspecified
weight kg
Unspecified
weight_change
Unspecified
weight_units
kilograms
whole_eggs
Unspecified
whole_grain_frequency
Unspecified