American Gut Project; 10317.000065414
human oral metagenome
American Gut Project Mouth sample
ENA-FIRST-PUBLIC
2018-05-12T17:02:50Z
ENA-LAST-UPDATE
2018-05-12T06:15:26Z
External Id
SAMEA4662544
INSDC center name
UCSDMI
INSDC first public
2018-05-12T17:02:50Z
INSDC last update
2018-05-12T06:15:26Z
INSDC status
public
Submitter Id
qiita_sid_10317:10317.000065414
acid_reflux
Unspecified
acne medication
No
acne_medication_otc
No
add_adhd
I do not have this condition
age cat
30s
age years
37
age_corrected
37.0
alcohol consumption
No
alcohol_frequency
Never
alcohol_types
Unspecified
alcohol_types_beercider
No
alcohol_types_red_wine
No
alcohol_types_sour_beers
No
alcohol_types_spiritshard_alcohol
No
alcohol_types_unspecified
Yes
alcohol_types_white_wine
No
allergic to i have no food allergies that i know of
No
allergic_to
Unspecified
allergic_to_other
No
allergic_to_peanuts
No
allergic_to_shellfish
No
allergic_to_tree_nuts
No
allergic_to_unspecified
Yes
alzheimers
I do not have this condition
anonymized name
000065414
antibiotic_history
I have not taken antibiotics in the past year.
appendix_removed
No
artificial_sweeteners
Never
asd
Diagnosed by a medical professional (doctor, physician assistant)
assigned_from_geo
Yes
autoimmune
I do not have this condition
birth year
1980
bmi
24.12
bmi_cat
Normal
bmi_corrected
24.12
body habitat
UBERON:oral cavity
body product
UBERON:saliva
body site
UBERON:tongue
bowel_movement_frequency
One
bowel_movement_quality
I tend to have normal formed stool - Type 3 and 4
breastmilk_formula_ensure
Unspecified
cancer
I do not have this condition
cancer treatment
Unspecified
cardiovascular_disease
I do not have this condition
cat
No
cdiff
I do not have this condition
census_region
Unspecified
chickenpox
Not sure
clinical condition
Unspecified
collection date
2017-03-18
collection month
March
collection season
Spring
collection time
16:20
collection_timestamp
03/18/2017 16:20
consume_animal_products_abx
Yes
contraceptive
No
cosmetics_frequency
Never
country
Ireland
country of birth
Ireland
country_residence
Ireland
csection
No
deodorant_use
Unspecified
depression_bipolar_schizophrenia
Unspecified
diabetes
I do not have this condition
diabetes type
Unspecified
diet type
Omnivore
dna_extracted
Yes
dog
No
dominant hand
Unspecified
drinking_water_source
Filtered
drinks_per_session
I don't drink
economic_region
Unspecified
elevation
104.2
env biome
dense settlement biome
env feature
human-associated habitat
env package
human-oral
env_material
saliva
epilepsy_or_seizure_disorder
I do not have this condition
exercise_frequency
Unspecified
exercise_location
Unspecified
fed_as_infant
A mixture of breast milk and formula
fermented_plant_frequency
Never
flossing_frequency
Never
flu_vaccine_date
I have not gotten the flu vaccine in the past year.
frozen_dessert_frequency
Never
fruit_frequency
Regularly (3-5 times/week)
fungal_overgrowth
Diagnosed by a medical professional (doctor, physician assistant)
geo loc name
Ireland:County Wicklow
gluten
I do not eat gluten because it makes me feel bad
height cm
190
height_units
centimeters
high_fat_red_meat_frequency
Rarely (less than once/week)
homecooked_meals_frequency
Daily
host common name
human
host subject id
2157883ac4dc5d7f06093723640a86d1debbc2083357fb8ba8557bd4f17b588319a087ee4e535f188d6bcbd52522ff3439fb1dcdb1e2e91d674726298b13c611
host taxid
9606
ibd
I do not have this condition
ibd diagnosis
Unspecified
ibd_diagnosis_refined
Unspecified
ibs
Self-diagnosed
kidney_disease
I do not have this condition
lactose
Unspecified
last_move
I have lived in my current state of residence for more than a year.
last_travel
I have not been outside of my country of residence in the past year.
latitude
52.7
level_of_education
Unspecified
liver_disease
I do not have this condition
livingwith
No
longitude
-6.5
lowgrain_diet_type
Unspecified
lung disease
I do not have this condition
meat_eggs_frequency
Regularly (3-5 times/week)
mental_illness
No
mental_illness_type
Unspecified
mental_illness_type_anorexia_nervosa
No
mental_illness_type_bipolar_disorder
No
mental_illness_type_bulimia_nervosa
No
mental_illness_type_depression
No
mental_illness_type_ptsd_posttraumatic_stress_disorder
No
mental_illness_type_schizophrenia
No
mental_illness_type_substance_abuse
No
mental_illness_type_unspecified
Yes
migraine
I do not have this condition
milk_cheese_frequency
Never
milk_substitute_frequency
Regularly (3-5 times/week)
multivitamin
No
nail_biter
No
non_food_allergies
Unspecified
non_food_allergies_beestings
No
non_food_allergies_drug_eg_penicillin
No
non_food_allergies_pet_dander
No
non_food_allergies_poison_ivyoak
No
non_food_allergies_sun
No
non_food_allergies_unspecified
Yes
olive_oil
Regularly (3-5 times/week)
one_liter_of_water_a_day_frequency
Daily
other_supplement_frequency
Yes
pets_other
No
physical_specimen_location
UCSDMI
physical_specimen_remaining
Yes
pku
Unspecified
pool_frequency
Unspecified
poultry_frequency
Regularly (3-5 times/week)
pregnant
No
prepared_meals_frequency
Never
probiotic_frequency
Daily
public
Yes
race
Other
ready_to_eat_meals_frequency
Never
red_meat_frequency
Occasionally (1-2 times/week)
roommates
Unspecified
roommates_in_study
No
salted_snacks_frequency
Never
sample name
qiita_sid_10317:10317.000065414
sample type
Mouth
scientific_name
human oral metagenome
seafood_frequency
Occasionally (1-2 times/week)
seasonal_allergies
No
sex
male
sibo
Unspecified
skin_condition
Self-diagnosed
sleep_duration
7-8 hours
smoking_frequency
Never
softener
Yes
specialized_diet
Unspecified
specialized_diet_exclude_dairy
Yes
specialized_diet_exclude_nightshades
No
specialized_diet_exclude_refined_sugars
Yes
specialized_diet_fodmap
No
specialized_diet_halaal
No
specialized_diet_i_do_not_eat_a_specialized_diet
No
specialized_diet_kosher
No
specialized_diet_modified_paleo_diet
No
specialized_diet_other_restrictions_not_described_here
Yes
specialized_diet_paleodiet_or_primal_diet
No
specialized_diet_raw_food_diet
No
specialized_diet_unspecified
No
specialized_diet_westenprice_or_other_lowgrain_low_processed_fo
No
state
County Wicklow
subset_age
True
subset_antibiotic_history
True
subset_bmi
True
subset_diabetes
True
subset_healthy
True
subset_ibd
True
sugar_sweetened_drink_frequency
Never
sugary_sweets_frequency
Never
survey_id
89b0ae931b9703f4
teethbrushing_frequency
Daily
thyroid
I do not have this condition
tonsils_removed
No
types_of_plants
11 to 20
vegetable_frequency
Daily
vitamin_b_supplement_frequency
Daily
vitamin_d_supplement_frequency
Daily
vivid_dreams
Unspecified
weight kg
87
weight_change
Unspecified
weight_units
kilograms
whole_eggs
Regularly (3-5 times/week)
whole_grain_frequency
Regularly (3-5 times/week)