human metagenome
strain
not applicable
isolate
not applicable
host
Homo sapiens
isolation_source
Penis
collection_date
missing
geo_loc_name
South Africa: Cape Town
sample_type
Penile swab
genotype
bacteria
altitude
not applicable
lat_lon
not applicable
LibraryID
P-Library2-24_S17_L001
LibraryNo
P-Library2
barcode_sequence
GGACTCCTCTCTCTAT
linker_primer_sequence
CCTACGGGNGGCWGCAG
reverse_primer
GACTACHVGGGTATCTAATCC
Age
32
HIV
n
arv
not applicable
arvtype2
not applicable
female.part
no.part
married
0
regsex
1
partreg
3
livetog
0
age1sex
17
lifeparts
20
sex1month
6
contracep
1
nowcondom
1
circumsized
0
cigs
1
discharge
2
discharge2
not applicable
ulcer
2
pap
n
CD4
n
HPV
positive
HPV types (Roche Genotyping)
42, 53, 56, 89
Low B globin
positive
High B globin
positive
BioSampleModel
Metagenome or environmental