human metagenome
strain
not applicable
isolate
not applicable
host
Homo sapiens
isolation_source
Penis
collection_date
missing
geo_loc_name
South Africa: Cape Town
sample_type
Penile swab
genotype
bacteria
altitude
not applicable
lat_lon
not applicable
LibraryID
P-Library3-84_S83_L001
LibraryNo
P-Library3
barcode_sequence
AAGAGGCAAAGGAGTA
linker_primer_sequence
CCTACGGGNGGCWGCAG
reverse_primer
GACTACHVGGGTATCTAATCC
Age
32
HIV
y
arv
2
arvtype2
not applicable
female.part
no.part
married
1
regsex
4
partreg
2
livetog
1
age1sex
15
lifeparts
4
sex1month
4
contracep
1
nowcondom
1
circumsized
1
cigs
1
discharge
2
discharge2
not applicable
ulcer
1
pap
n
CD4
35
HPV
positive
HPV types (Roche Genotyping)
35, 52, 53, 58, 66, 67
Low B globin
positive
High B globin
positive
BioSampleModel
Metagenome or environmental