American Gut Project; 10317.000079417
human gut metagenome
American Gut Project Stool sample
ENA-FIRST-PUBLIC
2018-05-12T17:02:51Z
ENA-LAST-UPDATE
2018-05-11T22:20:49Z
External Id
SAMEA4662230
INSDC center name
UCSDMI
INSDC first public
2018-05-12T17:02:51Z
INSDC last update
2018-05-11T22:20:49Z
INSDC status
public
Submitter Id
qiita_sid_10317:10317.000079417
acid_reflux
I do not have this condition
acne medication
No
acne_medication_otc
No
add_adhd
I do not have this condition
age cat
50s
age years
54
age_corrected
54.0
alcohol consumption
No
alcohol_frequency
Never
alcohol_types
Unspecified
alcohol_types_beercider
No
alcohol_types_red_wine
No
alcohol_types_sour_beers
No
alcohol_types_spiritshard_alcohol
No
alcohol_types_unspecified
Yes
alcohol_types_white_wine
No
allergic to i have no food allergies that i know of
Yes
allergic_to
Unspecified
allergic_to_other
No
allergic_to_peanuts
No
allergic_to_shellfish
No
allergic_to_tree_nuts
No
allergic_to_unspecified
No
alzheimers
I do not have this condition
anonymized name
000079417
antibiotic_history
I have not taken antibiotics in the past year.
appendix_removed
Yes
artificial_sweeteners
Never
asd
I do not have this condition
assigned_from_geo
Yes
autoimmune
I do not have this condition
birth year
1963
bmi
27.32
bmi_cat
Overweight
bmi_corrected
27.32
body habitat
UBERON:feces
body product
UBERON:feces
body site
UBERON:feces
bowel_movement_frequency
Two
bowel_movement_quality
Unspecified
breastmilk_formula_ensure
Unspecified
cancer
I do not have this condition
cancer treatment
Unspecified
cardiovascular_disease
I do not have this condition
cat
No
cdiff
I do not have this condition
census_region
West
chickenpox
Yes
clinical condition
I do not have this condition
collection date
2018-03-25
collection month
March
collection season
Spring
collection time
18:20
collection_timestamp
03/25/2018 18:20
consume_animal_products_abx
Not sure
contraceptive
No
cosmetics_frequency
Never
country
USA
country of birth
United States
country_residence
United States
csection
No
deodorant_use
I use deodorant
depression_bipolar_schizophrenia
Unspecified
diabetes
I do not have this condition
diabetes type
Unspecified
diet type
Omnivore
dna_extracted
Yes
dog
No
dominant hand
I am right handed
drinking_water_source
City
drinks_per_session
I don't drink
economic_region
Far West
elevation
2.1
env biome
dense settlement biome
env feature
human-associated habitat
env package
human-gut
env_material
feces
epilepsy_or_seizure_disorder
I do not have this condition
exercise_frequency
Regularly (3-5 times/week)
exercise_location
Both
fed_as_infant
Unspecified
fermented_plant_frequency
Never
flossing_frequency
Daily
flu_vaccine_date
6 months
frozen_dessert_frequency
Rarely (less than once/week)
fruit_frequency
Regularly (3-5 times/week)
fungal_overgrowth
I do not have this condition
geo loc name
USA:CA
gluten
Unspecified
height cm
175
height_units
centimeters
high_fat_red_meat_frequency
Never
homecooked_meals_frequency
Daily
host
d9d601fbe390660e99b8a686c8c9bb2874fa6910f2c41e0ce2436e284e4366e85a389e6a30d9018d6baca37c563e2eb729bc15a6b467c6ea6eac3222880c7ad6
host common name
human
host taxid
9606
ibd
I do not have this condition
ibd diagnosis
Unspecified
ibd_diagnosis_refined
Unspecified
ibs
Self-diagnosed
kidney_disease
I do not have this condition
lactose
No
last_move
I have lived in my current state of residence for more than a year.
last_travel
I have not been outside of my country of residence in the past year.
latitude
37.4
level_of_education
Graduate or Professional degree
liver_disease
I do not have this condition
livingwith
Yes
longitude
-122.0
lowgrain_diet_type
Unspecified
lung disease
I do not have this condition
meat_eggs_frequency
Regularly (3-5 times/week)
mental_illness
No
mental_illness_type
Unspecified
mental_illness_type_anorexia_nervosa
No
mental_illness_type_bipolar_disorder
No
mental_illness_type_bulimia_nervosa
No
mental_illness_type_depression
No
mental_illness_type_ptsd_posttraumatic_stress_disorder
No
mental_illness_type_schizophrenia
No
mental_illness_type_substance_abuse
No
mental_illness_type_unspecified
Yes
migraine
I do not have this condition
milk_cheese_frequency
Regularly (3-5 times/week)
milk_substitute_frequency
Never
multivitamin
No
nail_biter
Yes
non_food_allergies
Unspecified
non_food_allergies_beestings
No
non_food_allergies_drug_eg_penicillin
No
non_food_allergies_pet_dander
No
non_food_allergies_poison_ivyoak
Yes
non_food_allergies_sun
No
non_food_allergies_unspecified
No
olive_oil
Occasionally (1-2 times/week)
one_liter_of_water_a_day_frequency
Rarely (less than once/week)
other_supplement_frequency
Yes
pets_other
No
physical_specimen_location
UCSDMI
physical_specimen_remaining
Yes
pku
I do not have this condition
pool_frequency
Never
poultry_frequency
Occasionally (1-2 times/week)
pregnant
No
prepared_meals_frequency
Regularly (3-5 times/week)
probiotic_frequency
Never
public
Yes
race
Caucasian
ready_to_eat_meals_frequency
Regularly (3-5 times/week)
red_meat_frequency
Rarely (less than once/week)
roommates_in_study
No
salted_snacks_frequency
Never
sample name
qiita_sid_10317:10317.000079417
sample type
Stool
scientific_name
human gut metagenome
seafood_frequency
Occasionally (1-2 times/week)
seasonal_allergies
Yes
sex
male
sibo
I do not have this condition
skin_condition
Unspecified
sleep_duration
7-8 hours
smoking_frequency
Never
softener
No
specialized_diet
Unspecified
specialized_diet_exclude_dairy
No
specialized_diet_exclude_nightshades
No
specialized_diet_exclude_refined_sugars
No
specialized_diet_fodmap
No
specialized_diet_halaal
No
specialized_diet_i_do_not_eat_a_specialized_diet
Yes
specialized_diet_kosher
No
specialized_diet_modified_paleo_diet
No
specialized_diet_other_restrictions_not_described_here
No
specialized_diet_paleodiet_or_primal_diet
No
specialized_diet_raw_food_diet
No
specialized_diet_unspecified
No
specialized_diet_westenprice_or_other_lowgrain_low_processed_fo
No
state
CA
subset_age
True
subset_antibiotic_history
True
subset_bmi
True
subset_diabetes
True
subset_healthy
True
subset_ibd
True
sugar_sweetened_drink_frequency
Rarely (less than once/week)
sugary_sweets_frequency
Rarely (less than once/week)
survey_id
696a27364af3ac9d
teethbrushing_frequency
Daily
thyroid
I do not have this condition
tonsils_removed
No
types_of_plants
Unspecified
vegetable_frequency
Regularly (3-5 times/week)
vitamin_b_supplement_frequency
Never
vitamin_d_supplement_frequency
Never
vivid_dreams
Never
weight kg
83
weight_change
Remained stable
weight_units
kilograms
whole_eggs
Regularly (3-5 times/week)
whole_grain_frequency
Rarely (less than once/week)