E-MTAB-6413:Sample 21
Homo sapiens
Protocols: Venous blood was collected into PAXgene blood RNA tube (BD). Total RNA was extracted using PAXgene blood RNA kit (Qiagen). Libraries were prepared with 1μg of total RNA using the ScriptSeq v2 RNA-seq library preparation kit (Illumina). Globin-Zero Gold kit (Epicentre) was used to remove ribosomal RNA and globin messenger RNA.
ENA checklist
ERC000011
INSDC center alias
Institute for Molecular Bioscience, University of Queensland
INSDC center name
Institute for Molecular Bioscience, University of Queensland
INSDC first public
2018-06-20T17:03:13Z
INSDC last update
2018-01-24T12:59:49Z
INSDC status
public
SRA accession
ERS2154679
Sample Name
ERS2154679
age
15
alias
E-MTAB-6413:Sample 21
broker name
ArrayExpress
disease
hyperlactatemia
ethnicity
Fulla
first blantyre coma score
5
hemoglobin concentration (g/dl)
11.7
individual
HL_171
infect
Plasmodium falciparum
lactate measurement
5.8
mean cell volume (fl)
77.9
organism
Homo sapiens
organism part
blood
parasite clones
3
parasite density (per microliter)
68388
percentage lymphocytes
17.6
percentage monocytes
4.8
percentage neutrophils
77.6
percentage parasitemia
1.64
pfhrp2 measurement
45.32
platelet count (x10^9/l)
126
red blood cell count (x10^12/l)
4.17
sex
male
sickle cell screen
Pos SC
title
Sample 21
total white cell count (x10^9/l)
17.6