Yarrowia keelungensis CBS 11062 genome assembly
Yarrowia keelungensis
The genome of Yarrowia keelungensis strain CBS 11062 has been sequenced using Illumina Solexa technology with a shot-gun library and a mate pair library of 8 kb in average. The raw reads were trimmed with Trimmomatic and cutadapt. The assembly was done using SOAPdenovo2 with a kmer of 71, as estimated with kmergenie. Two successive runs of GapCloser were used to close gaps. The current draft genome sequence is composed of 40 scaffolds larger than 5 kb (39 nuclear and 1 mitochondrial ones), for a total size of the nuclear DNA of 21,639,051 bp with an N50 of 1,074,350 bp (6 scaffolds) and a G+C content of 48.2%.
ENA first public
2018-08-09
ENA last update
2021-08-02
External Id
SAMEA4824175
INSDC center alias
INRA UMR 1319
INSDC center name
INRA UMR 1319
INSDC first public
2018-08-09T17:03:22Z
INSDC last update
2021-08-02T15:16:52Z
INSDC status
public
Submitter Id
YAKE0
sample name
YAKE0
strain
CBS 11062
type-material
culture from holotype of Yarrowia keelungensis