E-MTAB-6413:Sample 14
Homo sapiens
Alias
E-MTAB-6413:Sample 14
Broker name
ArrayExpress
Description
Protocols: Venous blood was collected into PAXgene blood RNA tube (BD). Total RNA was extracted using PAXgene blood RNA kit (Qiagen). Libraries were prepared with 1μg of total RNA using the ScriptSeq v2 RNA-seq library preparation kit (Illumina). Globin-Zero Gold kit (Epicentre) was used to remove ribosomal RNA and globin messenger RNA.
ENA checklist
ERC000011
INSDC center alias
Institute for Molecular Bioscience, University of Queensland
INSDC center name
Institute for Molecular Bioscience, University of Queensland
INSDC first public
2018-06-20T17:03:13Z
INSDC last update
2018-01-24T12:59:48Z
INSDC status
public
SRA accession
ERS2154660
Sample Name
ERS2154660
Title
Sample 14
age
4.83
disease
cerebral malaria
ethnicity
Jola
first blantyre coma score
2
hemoglobin concentration (g/dl)
9.7
individual
CM_207
infect
Plasmodium falciparum
lactate measurement
3.8
mean cell volume (fl)
80.4
organism
Homo sapiens
organism part
blood
parasite clones
3
parasite density (per microliter)
not available
percentage lymphocytes
41.5
percentage monocytes
7.3
percentage neutrophils
51.2
percentage parasitemia
not available
pfhrp2 measurement
117.48
platelet count (x10^9/l)
39
red blood cell count (x10^12/l)
3.52
sex
female
sickle cell screen
Neg
total white cell count (x10^9/l)
7.5