Lichen associated bacterial communities
symbiont metagenome
ENA first public
2018-06-22
ENA last update
2017-11-30
External Id
SAMEA104410675
INSDC center alias
OBSERVATOIRE OCEANOLOGIQUE DE BANYULS
INSDC center name
OBSERVATOIRE OCEANOLOGIQUE DE BANYULS
INSDC first public
2018-06-22T17:02:46Z
INSDC last update
2017-11-30T12:33:24Z
INSDC status
public
Submitter Id
Lc2.3
collection date
2013-10-16
environment (biome)
ocean biome
environment (feature)
marine eulittoral zone
environment (material)
lichen
geographic location (country and/or sea)
France
geographic location (latitude)
-2.471969
geographic location (longitude)
48.629262
geographic location (region and locality)
Erquy, Brittany
host common name
Cyanolichen
host-associated environmental package
host-associated
investigation type
mimarks-survey
pcr conditions
initial denaturation:95degC_3min;denaturation:95degC_15sec;annealing:55degC_15sec;elongation:72degC_2sec;final elongation:72degC_30sec;25 cycles
pcr primers
341FWD:CCTACGGGNGGCWGCAG; 805R:GACTACHVGGGTATCTAATCC
project name
MALICA
sample name
Lc2.3
sequencing method
Illumina Miseq
target gene
16S rRNA
target subfragment
V3-V4
temperature
18.5