E-MTAB-6413:Sample 2
Homo sapiens
Protocols: Venous blood was collected into PAXgene blood RNA tube (BD). Total RNA was extracted using PAXgene blood RNA kit (Qiagen). Libraries were prepared with 1μg of total RNA using the ScriptSeq v2 RNA-seq library preparation kit (Illumina). Globin-Zero Gold kit (Epicentre) was used to remove ribosomal RNA and globin messenger RNA.
ENA checklist
ERC000011
INSDC center alias
Institute for Molecular Bioscience, University of Queensland
INSDC center name
Institute for Molecular Bioscience, University of Queensland
INSDC first public
2018-06-20T17:03:13Z
INSDC last update
2018-01-24T12:59:48Z
INSDC status
public
SRA accession
ERS2154668
Sample Name
ERS2154668
age
3
alias
E-MTAB-6413:Sample 2
broker name
ArrayExpress
disease
cerebral malaria and hyperlactatemia
ethnicity
Manjago
first blantyre coma score
2
hemoglobin concentration (g/dl)
12.2
individual
CH_1014
infect
Plasmodium falciparum
lactate measurement
5.6
mean cell volume (fl)
not available
organism
Homo sapiens
organism part
blood
parasite clones
not available
parasite density (per microliter)
675000
percentage lymphocytes
21.9
percentage monocytes
not available
percentage neutrophils
not available
percentage parasitemia
15
pfhrp2 measurement
524.282
platelet count (x10^9/l)
1
red blood cell count (x10^12/l)
4.5
sex
male
sickle cell screen
Neg
title
Sample 2
total white cell count (x10^9/l)
9