Calvert Island beach sand; 10145.3rd.3C
groundwater metagenome
3rd-3C sample ground water seepage
ENA first public
2016-07-08
ENA last update
2016-07-07
External Id
SAMEA4067280
INSDC center alias
UCSDMI
INSDC center name
University of California San Diego Microbiome Initiative
INSDC first public
2016-07-08T17:01:15Z
INSDC last update
2016-07-07T18:55:44Z
INSDC status
public
Submitter Id
qiita_sid_10145:10145.3rd.3C
altitude
0
anonymized name
3rd-3C
approx_distance_from_seawater_at_low_tide
50
approx_distance_transect_start_to_highest_tide_line_meters
45
area
Calvert Island
assigned_from_geo
TRUE
bearing_degrees
332
chlorophyll
0.012
chlorophyll_method
90 percent acetone extraction
chlorophyll_units
ug/g sand or ug/L
collection_timestamp
Missing: Not provided
common name
ground water metagenome
country
Canada
degree_of_saturation_percent
88.03
depth
0-.001
dna_ext_method
collect microbes onto 0.22 um filter, extract with MoBio PowerSoil kit
dna_extracted
TRUE
elevation
2.5
env biome
marine benthic biome
env feature
high tide zone
env matter
ground water
env package
water
extracted DNA avail now
TRUE
g_sand_or_ml_sw_for_dna_extraction
1.8
has_extracted_data
TRUE
has_physical_specimen
TRUE
host common name
ground water metagenome
host subject id
3rd-3C
host taxid
717931
latitude
51.65
longitude
-128.15
moisture content
0.223
moisture_content_meth
dry at 110degC
moisture_content_units
gH2O/gsand
nh4_n
0.33
nh4_n_meth
2N KCl Extractable
nh4_n_units
mg/kg
no3_n
0.17
no3_n_meth
2N KCl Extractable
no3_n_units
mg/kg
organic_matter_meth
LOI at 450 degC
organic_matter_percent
0.36
physical_specimen_location
UBC
physical_specimen_remaining
TRUE
po4_p
1.1
po4_p_meth
Bray P-1
po4_p_units
mg per kg
public
TRUE
required_sample_info_status
complete
sample name
qiita_sid_10145:10145.3rd.3C
sample type
ground water
sand_grain_method
shake sand through sieves
sand_grains_between_106_and_45um_percent
0.14
sand_grains_between_250_and_106um_percent
28.1
sand_grains_between_355_and_250um_percent
43.68
sand_grains_greater_than_355um_percent
28.08
sand_grains_less_than_45um_percent
0
seawater_or_pore_water_ph
8.36
seawater_or_pore_water_ph_meth
pH meter
seawater_or_pore_water_salinity
31
seawater_or_pore_water_salinity_meth
refractrometer
sediment_ph
8.88
sediment_ph_meth
20g dry sand + 20ml dH2O, shake, let sit ~30mins; pH meter
sediment_salinity
8.25
sediment_salinity_meth
20g dry sand + 20ml dH2O, shake, let sit ~30mins; conductivity meter
sediment_salinity_units
ppt
slope aspect
North west
temp
13.5
weather
Overcast to partly cloudy