E-MTAB-6413:Sample 15
Homo sapiens
Alias
E-MTAB-6413:Sample 15
Broker name
ArrayExpress
Description
Protocols: Venous blood was collected into PAXgene blood RNA tube (BD). Total RNA was extracted using PAXgene blood RNA kit (Qiagen). Libraries were prepared with 1μg of total RNA using the ScriptSeq v2 RNA-seq library preparation kit (Illumina). Globin-Zero Gold kit (Epicentre) was used to remove ribosomal RNA and globin messenger RNA.
ENA checklist
ERC000011
INSDC center alias
Institute for Molecular Bioscience, University of Queensland
INSDC center name
Institute for Molecular Bioscience, University of Queensland
INSDC first public
2018-06-20T17:03:13Z
INSDC last update
2018-01-24T12:59:48Z
INSDC status
public
SRA accession
ERS2154661
Sample Name
ERS2154661
Title
Sample 15
age
5
disease
cerebral malaria
ethnicity
Mandingo
first blantyre coma score
2
hemoglobin concentration (g/dl)
11.8
individual
CM_497
infect
Plasmodium falciparum
lactate measurement
3.8
mean cell volume (fl)
82.4
organism
Homo sapiens
organism part
blood
parasite clones
2
parasite density (per microliter)
394200
percentage lymphocytes
14.6
percentage monocytes
5.2
percentage neutrophils
80.2
percentage parasitemia
9
pfhrp2 measurement
67.1
platelet count (x10^9/l)
123
red blood cell count (x10^12/l)
4.38
sex
female
sickle cell screen
Neg
total white cell count (x10^9/l)
10.8