Seed, germinating seeds and seedlings metagenomes from Brasicca napus and Phaseolus vulgaris
Phaseoleae environmental sample
In this project, we aim to apply metagenomics approaches to uncover the function of the seed microbiota and its changes during germination and emergence. We will try to reveal through metagenomics the genetic content of this microbiota in seeds, germinating seeds and seedlings from 2 different plant families (Fabaceae and Brassicaceae).
ENA first public
2018-05-22
ENA last update
2017-09-29
External Id
SAMEA104326132
INSDC center alias
INRA Angers
INSDC center name
INRA Angers
INSDC first public
2018-05-22T17:03:04Z
INSDC last update
2017-09-29T15:03:33Z
INSDC status
public
Submitter Id
MetaSeed1
collection date
2015-01-09
environment (biome)
seed
environment (feature)
comercial inoculum
environment (material)
comercial inoculum
geographic location (country and/or sea)
France
geographic location (latitude)
47.4667
geographic location (longitude)
-0.55
investigation type
metagenome
plant-associated environmental package
plant-associated
project name
MetaSeed
sample name
MetaSeed1
sequencing method
Shotgun Illumina sequencing