E-MTAB-6413:Sample 17
Homo sapiens
Alias
E-MTAB-6413:Sample 17
Broker name
ArrayExpress
Description
Protocols: Venous blood was collected into PAXgene blood RNA tube (BD). Total RNA was extracted using PAXgene blood RNA kit (Qiagen). Libraries were prepared with 1μg of total RNA using the ScriptSeq v2 RNA-seq library preparation kit (Illumina). Globin-Zero Gold kit (Epicentre) was used to remove ribosomal RNA and globin messenger RNA.
ENA checklist
ERC000011
INSDC center alias
Institute for Molecular Bioscience, University of Queensland
INSDC center name
Institute for Molecular Bioscience, University of Queensland
INSDC first public
2018-06-20T17:03:13Z
INSDC last update
2018-01-24T12:59:48Z
INSDC status
public
SRA accession
ERS2154663
Sample Name
ERS2154663
Title
Sample 17
age
3.25
disease
cerebral malaria
ethnicity
Fulla
first blantyre coma score
2
hemoglobin concentration (g/dl)
7
individual
CM_88
infect
Plasmodium falciparum
lactate measurement
3.1
mean cell volume (fl)
not available
organism
Homo sapiens
organism part
blood
parasite clones
not available
parasite density (per microliter)
not available
percentage lymphocytes
not available
percentage monocytes
not available
percentage neutrophils
not available
percentage parasitemia
7.5
pfhrp2 measurement
not available
platelet count (x10^9/l)
not available
red blood cell count (x10^12/l)
not available
sex
male
sickle cell screen
not available
total white cell count (x10^9/l)
not available