E-MTAB-6413:Sample 20
Homo sapiens
Protocols: Venous blood was collected into PAXgene blood RNA tube (BD). Total RNA was extracted using PAXgene blood RNA kit (Qiagen). Libraries were prepared with 1μg of total RNA using the ScriptSeq v2 RNA-seq library preparation kit (Illumina). Globin-Zero Gold kit (Epicentre) was used to remove ribosomal RNA and globin messenger RNA.
ENA checklist
ERC000011
INSDC center alias
Institute for Molecular Bioscience, University of Queensland
INSDC center name
Institute for Molecular Bioscience, University of Queensland
INSDC first public
2018-06-20T17:03:13Z
INSDC last update
2018-01-24T12:59:49Z
INSDC status
public
SRA accession
ERS2154678
Sample Name
ERS2154678
age
3.25
alias
E-MTAB-6413:Sample 20
broker name
ArrayExpress
disease
hyperlactatemia
ethnicity
Fulla
first blantyre coma score
5
hemoglobin concentration (g/dl)
10.5
individual
HL_157
infect
Plasmodium falciparum
lactate measurement
5
mean cell volume (fl)
not available
organism
Homo sapiens
organism part
blood
parasite clones
1
parasite density (per microliter)
508200
percentage lymphocytes
11.8
percentage monocytes
2.4
percentage neutrophils
85.8
percentage parasitemia
11
pfhrp2 measurement
170.06
platelet count (x10^9/l)
52
red blood cell count (x10^12/l)
4.62
sex
male
sickle cell screen
Neg
title
Sample 20
total white cell count (x10^9/l)
7.5