Rhizosphere metatranscriptomics, sample LIB2390 (soil)
rhizosphere metagenome
Analysis of microbial community function in the rhizosphere of crop plants grown for 4 weeks
ENA first public
2014-09-18
ENA last update
2016-10-21
External Id
SAMEA2649814
INSDC center alias
JIC
INSDC center name
The John Innes Centre
INSDC first public
2014-09-18T17:05:42Z
INSDC last update
2016-10-21T09:33:22Z
INSDC status
public
Submitter Id
LIB2390_soil
collection date
2012-07
current vegetation
Grass
depth
0.01
environment (biome)
Terrestrial biome
environment (feature)
Rhizosphere
environment (material)
Soil
geographic location (country and/or sea)
United Kingdom
geographic location (elevation)
14
geographic location (latitude)
52.6333
geographic location (longitude)
1.1833
geographic location (region and locality)
Norfolk, Bawburgh Farm
investigation type
metagenome
miscellaneous parameter
28.69 mg/kg nitrate (NO3-) 136.8 mg/kg phosphate (PO43-) 167.4mg/kg potassium (K+) 63.55 mg/kg magnesium (Mg2+)
ph
7.53
project name
Rhizosphere metatranscriptomics
sample name
LIB2390_soil
sample weight for DNA extraction
5
sequencing method
Illumina
soil environmental package
soil
storage conditions (fresh/frozen/other)
fresh; aired for 2 days, then sieved
total organic carbon
26.2