E-MTAB-6413:Sample 3
Homo sapiens
Protocols: Venous blood was collected into PAXgene blood RNA tube (BD). Total RNA was extracted using PAXgene blood RNA kit (Qiagen). Libraries were prepared with 1μg of total RNA using the ScriptSeq v2 RNA-seq library preparation kit (Illumina). Globin-Zero Gold kit (Epicentre) was used to remove ribosomal RNA and globin messenger RNA.
ENA checklist
ERC000011
INSDC center alias
Institute for Molecular Bioscience, University of Queensland
INSDC center name
Institute for Molecular Bioscience, University of Queensland
INSDC first public
2018-06-20T17:03:13Z
INSDC last update
2018-01-24T12:59:48Z
INSDC status
public
SRA accession
ERS2154669
Sample Name
ERS2154669
age
8
alias
E-MTAB-6413:Sample 3
broker name
ArrayExpress
disease
cerebral malaria and hyperlactatemia
ethnicity
Fulla
first blantyre coma score
2
hemoglobin concentration (g/dl)
10.7
individual
CH_142
infect
Plasmodium falciparum
lactate measurement
14.8
mean cell volume (fl)
not available
organism
Homo sapiens
organism part
blood
parasite clones
2
parasite density (per microliter)
353280
percentage lymphocytes
60.2
percentage monocytes
7.5
percentage neutrophils
32.3
percentage parasitemia
9.2
pfhrp2 measurement
1311.42
platelet count (x10^9/l)
43
red blood cell count (x10^12/l)
3.84
sex
female
sickle cell screen
not available
title
Sample 3
total white cell count (x10^9/l)
12.4