E-MTAB-6413:Sample 25
Homo sapiens
Alias
E-MTAB-6413:Sample 25
Broker name
ArrayExpress
Description
Protocols: Venous blood was collected into PAXgene blood RNA tube (BD). Total RNA was extracted using PAXgene blood RNA kit (Qiagen). Libraries were prepared with 1μg of total RNA using the ScriptSeq v2 RNA-seq library preparation kit (Illumina). Globin-Zero Gold kit (Epicentre) was used to remove ribosomal RNA and globin messenger RNA.
ENA checklist
ERC000011
INSDC center alias
Institute for Molecular Bioscience, University of Queensland
INSDC center name
Institute for Molecular Bioscience, University of Queensland
INSDC first public
2018-06-20T17:03:13Z
INSDC last update
2018-01-24T12:59:49Z
INSDC status
public
SRA accession
ERS2154683
Sample Name
ERS2154683
Title
Sample 25
age
9
disease
hyperlactatemia
ethnicity
Jola
first blantyre coma score
5
hemoglobin concentration (g/dl)
11.5
individual
HL_998
infect
Plasmodium falciparum
lactate measurement
6.2
mean cell volume (fl)
not available
organism
Homo sapiens
organism part
blood
parasite clones
not available
parasite density (per microliter)
498480
percentage lymphocytes
11.5
percentage monocytes
18.2
percentage neutrophils
61.5
percentage parasitemia
12.4
pfhrp2 measurement
434.434
platelet count (x10^9/l)
38.4
red blood cell count (x10^12/l)
4.02
sex
male
sickle cell screen
Neg
total white cell count (x10^9/l)
8.34