E-MTAB-6413:Sample 46
Homo sapiens
Protocols: Venous blood was collected into PAXgene blood RNA tube (BD). Total RNA was extracted using PAXgene blood RNA kit (Qiagen). Libraries were prepared with 1μg of total RNA using the ScriptSeq v2 RNA-seq library preparation kit (Illumina). Globin-Zero Gold kit (Epicentre) was used to remove ribosomal RNA and globin messenger RNA.
ENA checklist
ERC000011
INSDC center alias
Institute for Molecular Bioscience, University of Queensland
INSDC center name
Institute for Molecular Bioscience, University of Queensland
INSDC first public
2018-06-20T17:03:13Z
INSDC last update
2018-01-24T12:59:49Z
INSDC status
public
SRA accession
ERS2154704
Sample Name
ERS2154704
age
3
alias
E-MTAB-6413:Sample 46
broker name
ArrayExpress
disease
uncomplicated malaria
ethnicity
Jola
first blantyre coma score
5
hemoglobin concentration (g/dl)
9.86
individual
UM_602
infect
Plasmodium falciparum
lactate measurement
2.6
mean cell volume (fl)
60.8
organism
Homo sapiens
organism part
blood
parasite clones
not available
parasite density (per microliter)
254000
percentage lymphocytes
17.8
percentage monocytes
15.1
percentage neutrophils
64.5
percentage parasitemia
5
pfhrp2 measurement
175.34
platelet count (x10^9/l)
87.5
red blood cell count (x10^12/l)
5.08
sex
male
sickle cell screen
Neg
title
Sample 46
total white cell count (x10^9/l)
7.71