E-MTAB-6413:Sample 42
Homo sapiens
Alias
E-MTAB-6413:Sample 42
Broker name
ArrayExpress
Description
Protocols: Venous blood was collected into PAXgene blood RNA tube (BD). Total RNA was extracted using PAXgene blood RNA kit (Qiagen). Libraries were prepared with 1μg of total RNA using the ScriptSeq v2 RNA-seq library preparation kit (Illumina). Globin-Zero Gold kit (Epicentre) was used to remove ribosomal RNA and globin messenger RNA.
ENA checklist
ERC000011
INSDC center alias
Institute for Molecular Bioscience, University of Queensland
INSDC center name
Institute for Molecular Bioscience, University of Queensland
INSDC first public
2018-06-20T17:03:13Z
INSDC last update
2018-01-24T12:59:49Z
INSDC status
public
SRA accession
ERS2154700
Sample Name
ERS2154700
Title
Sample 42
age
10
disease
uncomplicated malaria
ethnicity
Mandingo
first blantyre coma score
5
hemoglobin concentration (g/dl)
13.3
individual
UM_492
infect
Plasmodium falciparum
lactate measurement
1.2
mean cell volume (fl)
85.8
organism
Homo sapiens
organism part
blood
parasite clones
1
parasite density (per microliter)
315700
percentage lymphocytes
14.3
percentage monocytes
3.9
percentage neutrophils
81.8
percentage parasitemia
7
pfhrp2 measurement
163.46
platelet count (x10^9/l)
80
red blood cell count (x10^12/l)
4.51
sex
female
sickle cell screen
Neg
total white cell count (x10^9/l)
8.7