1632.E5C01.Knight16sV4.JuannaBirdEMP.NoIndex.L005.R1.001.sequences; Bird Egg Shells from Spain
bird metagenome
Bird Egg Shells from nest Grajilla.Gra1.2
ENA first public
2016-07-13
ENA last update
2016-07-13
External Id
SAMEA4076489
INSDC center alias
UCSDMI
INSDC center name
University of California San Diego Microbiome Initiative
INSDC first public
2016-07-13T17:01:27Z
INSDC last update
2016-07-13T01:15:10Z
INSDC status
public
Submitter Id
qiita_sid_1632:1632.E5C01.Knight16sV4.JuannaBirdEMP.NoIndex.L005.R1.001.sequences
altitude
0
anonymized name
E5C01
arcsine_fledge_success_brood
Missing: Not collected
arcsine_fledge_success_clutch
Missing: Not collected
arcsine_hatching_success
1.570796327
area
Cortijo Bernabeles
assigned_from_geo
TRUE
backup
TRUE
bird_family
Corvidae
bird_order
Passeriformes
broken_eggs
0
brood_size
6
clutch_size
6
code_id_statistica
353
coll_date_juliane_days
145
collection date
5/26/07 0:00
collection_timestamp
5/26/07
comments_in_spanish
Sin datos de los pollos
common name
organismal metagenome
country
GAZ:Spain
country_nation
Spain
country_region
Hoya de Guadix
culturing_date
5/28/07
depth
0
dna_extracted
TRUE
elevation
1162
empo_0
EMP sample
empo_1
Host-associated
empo_2
Animal
empo_3
Animal surface
enterobacteriaceae_density
2777719.117
enterococcus_density
549.2340363
env biome
mediterranean shrubland biome
env feature
nest of bird
env matter
egg
env package
host-associated
eppendorf_name
GRA 1.2
estefania_plates
5C01
extracted DNA avail now
TRUE
feathers
TRUE
fledge_success_brood
Missing: Not collected
fledge_success_clutch
Missing: Not collected
fledging_date
Missing: Not collected
geo loc name
Spain:Hoya de Guadix
hatching_date
5/29/07
hatching_success
1
hatching_synchrony
asyn
host common name
Jackdaw
host scientific name
Passeriformes
host subject id
Grajilla.Gra1.2
host taxid
30423
latitude
37.31399167
lay_date_juliane_days
123
laying_date
8/2/07
log_enterobacteriaceae_density
6.443688484
log_enterococcus_density
2.740547451
log_mesophiles_density
6.766994792
log_rel_growth_enterobact
6.443688484
log_rel_growth_enterococcus
2.740547451
log_rel_growth_mesophiles
6.766994792
log_rel_growth_staphylococcus
-0.420755107
log_staphylococcus_density
0.030639333
longitude
-3.056652778
mesophiles_density
5847829.721
nest_type
hole
number_fledging
Missing: Not provided
number_sampled_eggs
6
observer
Juanma
physical_specimen_location
CCME
physical_specimen_remaining
TRUE
plants
TRUE
platero_plates
P4E10
public
TRUE
rel_growth_enterobacteriaceae
2777719.117
rel_growth_enterococcus
549.2340363
rel_growth_staphylococcus
-0.620471064
relative_growth_mesophiles
5847829.721
required_sample_info_status
completed
sample name
qiita_sid_1632:1632.E5C01.Knight16sV4.JuannaBirdEMP.NoIndex.L005.R1.001.sequences
sample type
bird egg shell
sample_nest
Grajilla.Gra1.2
sample_progress
sequenced (16S)
sampling time
2
sampling_code_id
440
species name
Corvus monedula
staphylococcus_density
0.073097872
storing_days
2
unhatched_eggs
0
year
2007