1632.E5C11.Knight16sV4.JuannaBirdEMP.NoIndex.L005.R1.001.sequences; Bird Egg Shells from Spain
bird metagenome
Bird Egg Shells from nest Estornino.E43.1
ENA first public
2016-07-13
ENA last update
2016-07-13
External Id
SAMEA4076499
INSDC center alias
UCSDMI
INSDC center name
University of California San Diego Microbiome Initiative
INSDC first public
2016-07-13T17:01:27Z
INSDC last update
2016-07-13T01:15:11Z
INSDC status
public
Submitter Id
qiita_sid_1632:1632.E5C11.Knight16sV4.JuannaBirdEMP.NoIndex.L005.R1.001.sequences
altitude
0
anonymized name
E5C11
arcsine_fledge_success_brood
Missing: Not collected
arcsine_fledge_success_clutch
Missing: Not collected
arcsine_hatching_success
1.047197551
area
Calahorra
assigned_from_geo
TRUE
backup
TRUE
bird_family
Sturnidae
bird_order
Passeriformes
broken_eggs
1
brood_size
3
clutch_size
5
code_id_statistica
278
coll_date_juliane_days
151
collection date
6/1/07 0:00
collection_timestamp
6/1/07
common name
organismal metagenome
country
GAZ:Spain
country_nation
Spain
country_region
Hoya de Guadix
culturing_date
6/14/07
depth
0
dna_extracted
TRUE
elevation
1106
empo_0
EMP sample
empo_1
Host-associated
empo_2
Animal
empo_3
Animal surface
enterobacteriaceae_density
1331541.018
enterococcus_density
15615344.66
env biome
mediterranean shrubland biome
env feature
nest of bird
env matter
egg
env package
host-associated
eppendorf_name
StE 43
estefania_plates
5C11
extracted DNA avail now
TRUE
feathers
TRUE
fledge_success_brood
Missing: Not collected
fledge_success_clutch
Missing: Not collected
fledging_date
Missing: Not collected
geo loc name
Spain:Hoya de Guadix
hatching_date
6/12/07
hatching_success
0.75
hatching_synchrony
syn
host common name
Sptoless starling
host scientific name
Passeriformes
host subject id
Estornino.E43.1
host taxid
381112
latitude
37.25371111
lay_date_juliane_days
146
laying_date
8/25/07
log_enterobacteriaceae_density
6.124354876
log_enterococcus_density
7.193551602
log_mesophiles_density
7.0829619
log_rel_growth_enterobact
0.698969743
log_rel_growth_enterococcus
-6.890336654
log_rel_growth_mesophiles
0.21748393
log_rel_growth_staphylococcus
0
log_staphylococcus_density
0
longitude
-3.029825
mesophiles_density
12104918.34
nest_type
hole
number_fledging
Missing: Not provided
number_sampled_eggs
4
observer
Carlos
physical_specimen_location
CCME
physical_specimen_remaining
TRUE
plants
TRUE
platero_plates
P5D08
public
TRUE
rel_growth_enterobacteriaceae
3.999996996
rel_growth_enterococcus
-0.999999871
rel_growth_staphylococcus
0
relative_growth_mesophiles
0.649999946
required_sample_info_status
completed
sample name
qiita_sid_1632:1632.E5C11.Knight16sV4.JuannaBirdEMP.NoIndex.L005.R1.001.sequences
sample type
bird egg shell
sample_nest
Estornino.E43.1
sample_progress
sequenced (16S)
sampling time
1
sampling_code_id
514
species name
Sturnus unicolor
staphylococcus_density
0
storing_days
13
unhatched_eggs
1
year
2007