1632.E1B09.Knight16sV4.JuannaBirdEMP.NoIndex.L005.R1.001.sequences; Bird Egg Shells from Spain
bird metagenome
Bird Egg Shells from nest Alcaudon.Alcaudon1.1
ENA first public
2016-07-13
ENA last update
2016-07-13
External Id
SAMEA4076059
INSDC center alias
UCSDMI
INSDC center name
University of California San Diego Microbiome Initiative
INSDC first public
2016-07-13T17:01:27Z
INSDC last update
2016-07-13T01:14:57Z
INSDC status
public
Submitter Id
qiita_sid_1632:1632.E1B09.Knight16sV4.JuannaBirdEMP.NoIndex.L005.R1.001.sequences
altitude
0
anonymized name
E1B09
arcsine_fledge_success_brood
Missing: Not collected
arcsine_fledge_success_clutch
Missing: Not collected
arcsine_hatching_success
1.570796327
area
Dolar
assigned_from_geo
TRUE
backup
FALSE
bird_family
Laniidae
bird_order
Passeriformes
broken_eggs
0
brood_size
6
clutch_size
6
code_id_statistica
56
coll_date_juliane_days
115
collection date
4/26/07 0:00
collection_timestamp
4/26/07
common name
organismal metagenome
country
GAZ:Spain
country_nation
Spain
country_region
Hoya de Guadix
culturing_date
5/1/07
depth
0
dna_extracted
TRUE
elevation
1154
empo_0
EMP sample
empo_1
Host-associated
empo_2
Animal
empo_3
Animal surface
enterobacteriaceae_density
0
enterococcus_density
0.2670691
env biome
mediterranean shrubland biome
env feature
nest of bird
env matter
egg
env package
host-associated
eppendorf_name
Alcaudon_lar.1
estefania_plates
1B09
extracted DNA avail now
TRUE
feathers
TRUE
fledge_success_brood
Missing: Not collected
fledge_success_clutch
Missing: Not collected
fledging_date
Missing: Not collected
geo loc name
Spain:Hoya de Guadix
hatching_date
5/9/07
hatching_success
1
hatching_synchrony
asyn
host common name
Southern grey shrike
host scientific name
Passeriformes
host subject id
Alcaudon.Alcaudon1.1
host taxid
219215
latitude
37.19090278
lay_date_juliane_days
105
laying_date
7/15/07
log_enterobacteriaceae_density
0
log_enterococcus_density
0.1028003
log_mesophiles_density
0.054434762
log_rel_growth_enterobact
6.72765372
log_rel_growth_enterococcus
0.235266761
log_rel_growth_mesophiles
7.543915346
log_rel_growth_staphylococcus
0
log_staphylococcus_density
0.054434762
longitude
-2.992936111
mesophiles_density
0.13353455
nest_type
open
number_fledging
Missing: Not provided
number_sampled_eggs
6
observer
Juan
physical_location_1
U Granada
physical_specimen_location
CCME
physical_specimen_remaining
TRUE
plants
TRUE
platero_plates
P2C04
public
TRUE
rel_growth_enterobacteriaceae
5341382.008
rel_growth_enterococcus
0.718963919
rel_growth_staphylococcus
0
relative_growth_mesophiles
34987695.14
required_sample_info_status
completed
sample name
qiita_sid_1632:1632.E1B09.Knight16sV4.JuannaBirdEMP.NoIndex.L005.R1.001.sequences
sample type
bird egg shell
sample_nest
Alcaudon.Alcaudon1.1
sample_progress
sequenced (16S)
sampling time
1
sampling_code_id
141
species name
Lanius meridionalis
staphylococcus_density
0.13353455
storing_days
5
unhatched_eggs
0
year
2007