1632.E1G02.Knight16sV4.JuannaBirdEMP.NoIndex.L005.R1.001.sequences; Bird Egg Shells from Spain
bird metagenome
Bird Egg Shells from nest Chova.Cho5.1
ENA first public
2016-07-13
ENA last update
2016-07-13
External Id
SAMEA4076109
INSDC center alias
UCSDMI
INSDC center name
University of California San Diego Microbiome Initiative
INSDC first public
2016-07-13T17:01:27Z
INSDC last update
2016-07-13T01:14:59Z
INSDC status
public
Submitter Id
qiita_sid_1632:1632.E1G02.Knight16sV4.JuannaBirdEMP.NoIndex.L005.R1.001.sequences
abandoned
No
altitude
0
anonymized name
E1G02
arcsine_fledge_success_brood
0.100167421
arcsine_fledge_success_clutch
0.086711161
arcsine_hatching_success
1.570796327
area
Hernan-Valle
assigned_from_geo
TRUE
backup
FALSE
bird_family
Corvidae
bird_order
Passeriformes
broken_eggs
0
brood_size
4
clutch_size
4
code_id_statistica
173
coll_date_juliane_days
99
collection date
4/10/07 0:00
collection_timestamp
4/10/07
common name
organismal metagenome
country
GAZ:Spain
country_nation
Spain
country_region
Hoya de Guadix
culturing_date
4/11/07
depth
0
dna_extracted
TRUE
elevation
1134
empo_0
EMP sample
empo_1
Host-associated
empo_2
Animal
empo_3
Animal surface
enterobacteriaceae_density
0.913672837
enterococcus_density
0
env biome
mediterranean shrubland biome
env feature
nest of bird
env matter
egg
env package
host-associated
eppendorf_name
CHO 5.1
estefania_plates
1G02
extracted DNA avail now
TRUE
feathers
FALSE
fledge_success_brood
1
fledge_success_clutch
0.75
fledging_date
5/28/07
geo loc name
Spain:Hoya de Guadix
hatching_date
4/28/07
hatching_success
1
hatching_synchrony
asyn
host common name
Red-billed chough
host scientific name
Passeriformes
host subject id
Chova.Cho5.1
host taxid
56790
latitude
37.37229722
lay_date_juliane_days
95
laying_date
7/5/07
log_enterobacteriaceae_density
0.281867692
log_enterococcus_density
0
log_mesophiles_density
4.465955546
log_rel_growth_enterobact
Missing: Not provided
log_rel_growth_enterococcus
Missing: Not provided
log_rel_growth_mesophiles
Missing: Not provided
log_rel_growth_staphylococcus
Missing: Not provided
log_staphylococcus_density
0.189828102
longitude
-3.066655556
mesophiles_density
29237.53078
nest_type
hole
number_fledging
3
number_sampled_eggs
4
observer
Juanma
physical_location_1
U Granada
physical_specimen_location
CCME
physical_specimen_remaining
TRUE
plants
TRUE
platero_plates
P1B07
predated
No
public
TRUE
required_sample_info_status
completed
sample name
qiita_sid_1632:1632.E1G02.Knight16sV4.JuannaBirdEMP.NoIndex.L005.R1.001.sequences
sample type
bird egg shell
sample_nest
Chova.Cho5.1
sample_progress
sequenced (16S)
sampling time
1
sampling_code_id
20
species name
Pyrrhocorax phyrrhocorax
staphylococcus_density
0.548203702
storing_days
1
unhatched_eggs
0
year
2007