1632.E5H02.Knight16sV4.JuannaBirdEMP.NoIndex.L005.R1.001.sequences; Bird Egg Shells from Spain
bird metagenome
Bird Egg Shells from nest Gorrionmolinero.G28.2.1
ENA first public
2016-07-13
ENA last update
2016-07-13
External Id
SAMEA4076554
INSDC center alias
UCSDMI
INSDC center name
University of California San Diego Microbiome Initiative
INSDC first public
2016-07-13T17:01:26Z
INSDC last update
2016-07-13T01:15:12Z
INSDC status
public
Submitter Id
qiita_sid_1632:1632.E5H02.Knight16sV4.JuannaBirdEMP.NoIndex.L005.R1.001.sequences
abandoned
No
altitude
0
anonymized name
E5H02
arcsine_fledge_success_brood
0.089562407
arcsine_fledge_success_clutch
0.081740653
arcsine_hatching_success
1.149814957
area
Hernan-Valle
assigned_from_geo
TRUE
backup
TRUE
bird_family
Passeridae
bird_order
Passeriformes
broken_eggs
0
brood_size
5
clutch_size
6
code_id_statistica
347
coll_date_juliane_days
128
collection date
5/9/07 0:00
collection_timestamp
5/9/07
common name
organismal metagenome
country
GAZ:Spain
country_nation
Spain
country_region
Hoya de Guadix
culturing_date
5/24/07
depth
0
dna_extracted
TRUE
elevation
1134
empo_0
EMP sample
empo_1
Host-associated
empo_2
Animal
empo_3
Animal surface
enterobacteriaceae_density
14.26486474
enterococcus_density
0
env biome
mediterranean shrubland biome
env feature
nest of bird
env matter
egg
env package
host-associated
eppendorf_name
G 28.2.2
estefania_plates
5H02
extracted DNA avail now
TRUE
feathers
TRUE
fledge_success_brood
0.8
fledge_success_clutch
0.666666667
fledging_date
5/29/07
geo loc name
Spain:Hoya de Guadix
hatching_date
5/20/07
hatching_success
0.833
hatching_synchrony
syn
host common name
Eurasian tree sparrow
host scientific name
Passeriformes
host subject id
Gorrionmolinero.G28.2.1
host taxid
9160
latitude
37.37229722
lay_date_juliane_days
120
laying_date
7/30/07
log_enterobacteriaceae_density
1.18369296
log_enterococcus_density
0
log_mesophiles_density
2.438201705
log_rel_growth_enterobact
Missing: Not provided
log_rel_growth_enterococcus
Missing: Not provided
log_rel_growth_mesophiles
Missing: Not provided
log_rel_growth_staphylococcus
Missing: Not provided
log_staphylococcus_density
0
longitude
-3.066655556
mesophiles_density
273.2847772
nest_type
hole
number_fledging
4
number_sampled_eggs
6
observer
Juanma
physical_specimen_location
CCME
physical_specimen_remaining
TRUE
plants
TRUE
platero_plates
P4F011
predated
No
public
TRUE
required_sample_info_status
completed
sample name
qiita_sid_1632:1632.E5H02.Knight16sV4.JuannaBirdEMP.NoIndex.L005.R1.001.sequences
sample type
bird egg shell
sample_nest
Gorrionmolinero.G28.2.1
sample_progress
sequenced (16S)
sampling time
1
sampling_code_id
398
species name
Passer montanus
staphylococcus_density
0
storing_days
15
unhatched_eggs
1
year
2007