1632.E2B02.Knight16sV4.JuannaBirdEMP.NoIndex.L005.R1.001.sequences; Bird Egg Shells from Spain
bird metagenome
Bird Egg Shells from nest Collalbanegra.Col2.1
ENA first public
2016-07-13
ENA last update
2016-07-13
External Id
SAMEA4076148
INSDC center alias
UCSDMI
INSDC center name
University of California San Diego Microbiome Initiative
INSDC first public
2016-07-13T17:01:27Z
INSDC last update
2016-07-13T01:15:00Z
INSDC status
public
Submitter Id
qiita_sid_1632:1632.E2B02.Knight16sV4.JuannaBirdEMP.NoIndex.L005.R1.001.sequences
abandoned
No
altitude
0
anonymized name
E2B02
arcsine_fledge_success_brood
Missing: Not collected
arcsine_fledge_success_clutch
Missing: Not collected
arcsine_hatching_success
1.570796327
area
Hernan-Valle
assigned_from_geo
TRUE
backup
FALSE
bird_family
Muscicapidae
bird_order
Passeriformes
broken_eggs
0
brood_size
4
clutch_size
4
code_id_statistica
186
coll_date_juliane_days
110
collection date
4/21/07 0:00
collection_timestamp
4/20/07
common name
organismal metagenome
country
GAZ:Spain
country_nation
Spain
country_region
Hoya de Guadix
culturing_date
4/30/07
depth
0
dna_extracted
TRUE
elevation
1134
empo_0
EMP sample
empo_1
Host-associated
empo_2
Animal
empo_3
Animal surface
enterobacteriaceae_density
184790.8295
enterococcus_density
6.078645707
env biome
mediterranean shrubland biome
env feature
nest of bird
env matter
egg
env package
host-associated
eppendorf_name
COL 2.1
estefania_plates
2B02
extracted DNA avail now
TRUE
feathers
TRUE
fledge_success_brood
Missing: Not collected
fledge_success_clutch
Missing: Not collected
fledging_date
5/19/07
geo loc name
Spain:Hoya de Guadix
hatching_date
5/3/07
hatching_success
1
hatching_synchrony
asyn
host common name
Black weathear
host scientific name
Passeriformes
host subject id
Collalbanegra.Col2.1
host taxid
391703
latitude
37.37229722
lay_date_juliane_days
102
laying_date
7/12/07
log_enterobacteriaceae_density
5.266682765
log_enterococcus_density
0.849950176
log_mesophiles_density
8.482776837
log_rel_growth_enterobact
3.420214054
log_rel_growth_enterococcus
-0.544542448
log_rel_growth_mesophiles
-1.290730013
log_rel_growth_staphylococcus
0
log_staphylococcus_density
0
longitude
-3.066655556
mesophiles_density
303932285.4
nest_type
hole
number_fledging
Missing: Not provided
number_sampled_eggs
4
observer
Juanma
physical_location_1
U Granada
physical_specimen_location
CCME
physical_specimen_remaining
TRUE
plants
FALSE
platero_plates
P1H04
predated
No
public
TRUE
rel_growth_enterobacteriaceae
2630.564712
rel_growth_enterococcus
-0.714597645
rel_growth_staphylococcus
0
relative_growth_mesophiles
-0.948799997
required_sample_info_status
completed
sample name
qiita_sid_1632:1632.E2B02.Knight16sV4.JuannaBirdEMP.NoIndex.L005.R1.001.sequences
sample type
bird egg shell
sample_nest
Collalbanegra.Col2.1
sample_progress
sequenced (16S)
sampling time
1
sampling_code_id
96
species name
Oenanthe leucura
staphylococcus_density
0
storing_days
9
unhatched_eggs
0
year
2007