1632.E5E02.Knight16sV4.JuannaBirdEMP.NoIndex.L005.R1.001.sequences; Bird Egg Shells from Spain
bird metagenome
Bird Egg Shells from nest Crialo.UFA3.1
ENA first public
2016-07-13
ENA last update
2016-07-13
External Id
SAMEA4076516
INSDC center alias
UCSDMI
INSDC center name
University of California San Diego Microbiome Initiative
INSDC first public
2016-07-13T17:01:27Z
INSDC last update
2016-07-13T01:15:11Z
INSDC status
public
Submitter Id
qiita_sid_1632:1632.E5E02.Knight16sV4.JuannaBirdEMP.NoIndex.L005.R1.001.sequences
abandoned
No
altitude
0
anonymized name
E5E02
arcsine_fledge_success_brood
Missing: Not collected
arcsine_fledge_success_clutch
Missing: Not collected
arcsine_hatching_success
Missing: Not collected
area
Fuentealamo
assigned_from_geo
TRUE
backup
TRUE
bird_family
Cuculidae
bird_order
Cuculiformes
broken_eggs
Missing: Not collected
brood_size
Missing: Not collected
clutch_size
1
code_id_statistica
253
coll_date_juliane_days
144
collection date
5/25/07 0:00
collection_timestamp
5/25/07
comments_in_spanish
No eclosiono
common name
organismal metagenome
country
GAZ:Spain
country_nation
Spain
country_region
Hoya de Guadix
culturing_date
5/29/07
depth
0
dna_extracted
TRUE
elevation
1145
empo_0
EMP sample
empo_1
Host-associated
empo_2
Animal
empo_3
Animal surface
enterobacteriaceae_density
1.64769076
enterococcus_density
0
env biome
mediterranean shrubland biome
env feature
nest of bird
env matter
egg
env package
host-associated
eppendorf_name
UFA 3.3
estefania_plates
5.00E+02
extracted DNA avail now
TRUE
feathers
FALSE
fledge_success_brood
Missing: Not collected
fledge_success_clutch
Missing: Not collected
fledging_date
Missing: Not collected
geo loc name
Spain:Hoya de Guadix
hatching_date
Missing: Not collected
hatching_success
Missing: Not collected
hatching_synchrony
asyn
host common name
Great-spotted cuckoo
host scientific name
Cuculiformes
host subject id
Crialo.UFA3.1
host taxid
78203
latitude
37.34600556
lay_date_juliane_days
Missing: Not provided
laying_date
Missing: Not provided
log_enterobacteriaceae_density
0.42286726
log_enterococcus_density
0
log_mesophiles_density
1.94066164
log_rel_growth_enterobact
Missing: Not provided
log_rel_growth_enterococcus
Missing: Not provided
log_rel_growth_mesophiles
Missing: Not provided
log_rel_growth_staphylococcus
Missing: Not provided
log_staphylococcus_density
0
longitude
-3.061197222
mesophiles_density
86.2291498
nest_type
open
number_fledging
Missing: Not provided
number_sampled_eggs
1
observer
Juanma
physical_specimen_location
CCME
physical_specimen_remaining
TRUE
plants
TRUE
platero_plates
P4F08
predated
No
public
TRUE
required_sample_info_status
completed
sample name
qiita_sid_1632:1632.E5E02.Knight16sV4.JuannaBirdEMP.NoIndex.L005.R1.001.sequences
sample type
bird egg shell
sample_nest
Crialo.UFA3.1
sample_progress
sequenced (16S)
sampling time
1
sampling_code_id
479
species name
Clamator glandarius
staphylococcus_density
0
storing_days
4
unhatched_eggs
Missing: Not provided
year
2007