1632.E5D10.Knight16sV4.JuannaBirdEMP.NoIndex.L005.R1.001.sequences; Bird Egg Shells from Spain
bird metagenome
Bird Egg Shells from nest Collalbanegra.Col5.1
ENA first public
2016-07-13
ENA last update
2016-07-13
External Id
SAMEA4076511
INSDC center alias
UCSDMI
INSDC center name
University of California San Diego Microbiome Initiative
INSDC first public
2016-07-13T17:01:27Z
INSDC last update
2016-07-13T01:15:11Z
INSDC status
public
Submitter Id
qiita_sid_1632:1632.E5D10.Knight16sV4.JuannaBirdEMP.NoIndex.L005.R1.001.sequences
abandoned
No
altitude
0
anonymized name
E5D10
arcsine_fledge_success_brood
0.081740653
arcsine_fledge_success_clutch
0.081740653
arcsine_hatching_success
1.570796327
area
Fuentealamo
assigned_from_geo
TRUE
backup
TRUE
bird_family
Muscicapidae
bird_order
Passeriformes
broken_eggs
0
brood_size
4
clutch_size
4
code_id_statistica
192
coll_date_juliane_days
152
collection date
6/2/07 0:00
collection_timestamp
6/2/07
common name
organismal metagenome
country
GAZ:Spain
country_nation
Spain
country_region
Hoya de Guadix
culturing_date
6/20/07
depth
0
dna_extracted
TRUE
elevation
1145
empo_0
EMP sample
empo_1
Host-associated
empo_2
Animal
empo_3
Animal surface
enterobacteriaceae_density
27773.14836
enterococcus_density
158703.7049
env biome
mediterranean shrubland biome
env feature
nest of bird
env matter
egg
env package
host-associated
eppendorf_name
COL 5.1
estefania_plates
5D10
extracted DNA avail now
TRUE
feathers
TRUE
fledge_success_brood
0.666666667
fledge_success_clutch
0.666666667
fledging_date
6/26/07
geo loc name
Spain:Hoya de Guadix
hatching_date
6/16/07
hatching_success
1
hatching_synchrony
asyn
host common name
Black weathear
host scientific name
Passeriformes
host subject id
Collalbanegra.Col5.1
host taxid
391703
latitude
37.34600556
lay_date_juliane_days
145
laying_date
8/24/07
log_enterobacteriaceae_density
4.443640751
log_enterococcus_density
5.200589802
log_mesophiles_density
6.802647125
log_rel_growth_enterobact
1.991215497
log_rel_growth_enterococcus
-4.719006078
log_rel_growth_mesophiles
2.244028793
log_rel_growth_staphylococcus
0
log_staphylococcus_density
0
longitude
-3.061197222
mesophiles_density
6348148.197
nest_type
hole
number_fledging
2
number_sampled_eggs
4
observer
Juanma
physical_specimen_location
CCME
physical_specimen_remaining
TRUE
plants
FALSE
platero_plates
P5D01
predated
No
public
TRUE
rel_growth_enterobacteriaceae
96.99761299
rel_growth_enterococcus
-0.999980902
rel_growth_staphylococcus
0
relative_growth_mesophiles
174.3996784
required_sample_info_status
completed
sample name
qiita_sid_1632:1632.E5D10.Knight16sV4.JuannaBirdEMP.NoIndex.L005.R1.001.sequences
sample type
bird egg shell
sample_nest
Collalbanegra.Col5.1
sample_progress
sequenced (16S)
sampling time
1
sampling_code_id
530
species name
Oenanthe leucura
staphylococcus_density
0
storing_days
18
unhatched_eggs
0
year
2007