Bird Egg Shells from Spain; 1632.E4E11.Knight16sV4.JuannaBirdEMP.NoIndex.L005.R1.001.sequences
bird metagenome
Bird Egg Shells from nest Carbonero.CA21.1
ENA first public
2016-07-13
ENA last update
2016-07-13
External Id
SAMEA4076423
INSDC center alias
UCSDMI
INSDC center name
University of California San Diego Microbiome Initiative
INSDC first public
2016-07-13T17:01:27Z
INSDC last update
2016-07-13T01:15:08Z
INSDC status
public
Submitter Id
qiita_sid_1632:1632.E4E11.Knight16sV4.JuannaBirdEMP.NoIndex.L005.R1.001.sequences
altitude
0
anonymized name
E4E11
arcsine_fledge_success_brood
Missing: Not collected
arcsine_fledge_success_clutch
Missing: Not collected
arcsine_hatching_success
1.570796327
area
Hernan-Valle
assigned_from_geo
TRUE
backup
TRUE
bird_family
Paridae
bird_order
Passeriformes
broken_eggs
0
brood_size
9
clutch_size
9
code_id_statistica
121
coll_date_juliane_days
143
collection date
5/24/07 0:00
collection_timestamp
5/24/07
comments_in_spanish
Sin datos de los pollos
common name
organismal metagenome
country
GAZ:Spain
country_nation
Spain
country_region
Hoya de Guadix
culturing_date
5/29/07
depth
0
dna_extracted
TRUE
elevation
1134
empo_0
EMP sample
empo_1
Host-associated
empo_2
Animal
empo_3
Animal surface
enterobacteriaceae_density
0
enterococcus_density
119196.6751
env biome
mediterranean shrubland biome
env feature
nest of bird
env matter
egg
env package
host-associated
eppendorf_name
CA21.1
estefania_plates
4.00E+11
extracted DNA avail now
TRUE
feathers
TRUE
fledge_success_brood
Missing: Not collected
fledge_success_clutch
Missing: Not collected
fledging_date
Missing: Not collected
geo loc name
Spain:Hoya de Guadix
hatching_date
6/5/07
hatching_success
1
hatching_synchrony
asyn
host common name
Great tit
host scientific name
Passeriformes
host subject id
Carbonero.CA21.1
host taxid
9157
latitude
37.37229722
lay_date_juliane_days
133
laying_date
8/12/07
log_enterobacteriaceae_density
0
log_enterococcus_density
5.076267785
log_mesophiles_density
7.551044193
log_rel_growth_enterobact
5.584903577
log_rel_growth_enterococcus
-0.394437253
log_rel_growth_mesophiles
-0.481841869
log_rel_growth_staphylococcus
0.141294655
log_staphylococcus_density
0
longitude
-3.066655556
mesophiles_density
35566749.84
nest_type
hole
number_fledging
Missing: Not provided
number_sampled_eggs
9
observer
Juanma
physical_specimen_location
CCME
physical_specimen_remaining
TRUE
plants
FALSE
platero_plates
P4D06
public
TRUE
rel_growth_enterobacteriaceae
384505.4037
rel_growth_enterococcus
-0.596760798
rel_growth_staphylococcus
0.384505404
relative_growth_mesophiles
-0.670270251
required_sample_info_status
completed
sample name
qiita_sid_1632:1632.E4E11.Knight16sV4.JuannaBirdEMP.NoIndex.L005.R1.001.sequences
sample type
bird egg shell
sample_nest
Carbonero.CA21.1
sample_progress
sequenced (16S)
sampling time
1
sampling_code_id
474
species name
Parus major
staphylococcus_density
0
storing_days
5
unhatched_eggs
0
year
2007