Bird Egg Shells from Spain; 1632.E3C02.Knight16sV4.JuannaBirdEMP.NoIndex.L005.R1.001.sequences
bird metagenome
Bird Egg Shells from nest Collalbanegra.Col6.1
ENA first public
2016-07-13
ENA last update
2016-07-13
External Id
SAMEA4076268
INSDC center alias
UCSDMI
INSDC center name
University of California San Diego Microbiome Initiative
INSDC first public
2016-07-13T17:01:27Z
INSDC last update
2016-07-13T01:15:03Z
INSDC status
public
Submitter Id
qiita_sid_1632:1632.E3C02.Knight16sV4.JuannaBirdEMP.NoIndex.L005.R1.001.sequences
abandoned
No
altitude
0
anonymized name
E3C02
arcsine_fledge_success_brood
0.100167421
arcsine_fledge_success_clutch
0.100167421
arcsine_hatching_success
1.570796327
area
Fuentealamo
assigned_from_geo
TRUE
backup
FALSE
bird_family
Muscicapidae
bird_order
Passeriformes
broken_eggs
0
brood_size
5
clutch_size
5
code_id_statistica
194
coll_date_juliane_days
124
collection date
5/5/07 0:00
collection_timestamp
5/5/07
common name
organismal metagenome
country
GAZ:Spain
country_nation
Spain
country_region
Hoya de Guadix
culturing_date
5/6/07
depth
0
dna_extracted
TRUE
elevation
1145
empo_0
EMP sample
empo_1
Host-associated
empo_2
Animal
empo_3
Animal surface
enterobacteriaceae_density
9003109.158
enterococcus_density
1.000345462
env biome
mediterranean shrubland biome
env feature
nest of bird
env matter
egg
env package
host-associated
eppendorf_name
COL 6.1
estefania_plates
3C02
extracted DNA avail now
TRUE
feathers
TRUE
fledge_success_brood
1
fledge_success_clutch
1
fledging_date
5/28/07
geo loc name
Spain:Hoya de Guadix
hatching_date
5/17/07
hatching_success
1
hatching_synchrony
asyn
host common name
Black weathear
host scientific name
Passeriformes
host subject id
Collalbanegra.Col6.1
host taxid
391703
latitude
37.34600556
lay_date_juliane_days
115
laying_date
7/25/07
log_enterobacteriaceae_density
6.954392564
log_enterococcus_density
0.301105005
log_mesophiles_density
7.245662699
log_rel_growth_enterobact
-0.397939936
log_rel_growth_enterococcus
0.038027638
log_rel_growth_mesophiles
1.168122306
log_rel_growth_staphylococcus
0
log_staphylococcus_density
0
longitude
-3.061197222
mesophiles_density
17606080.13
nest_type
hole
number_fledging
5
number_sampled_eggs
5
observer
Juanma
physical_location_1
U Granada
physical_specimen_location
CCME
physical_specimen_remaining
TRUE
plants
FALSE
platero_plates
P2G012
predated
No
public
TRUE
rel_growth_enterobacteriaceae
-0.599999933
rel_growth_enterococcus
0.091509796
rel_growth_staphylococcus
0
relative_growth_mesophiles
13.72727195
required_sample_info_status
completed
sample name
qiita_sid_1632:1632.E3C02.Knight16sV4.JuannaBirdEMP.NoIndex.L005.R1.001.sequences
sample type
bird egg shell
sample_nest
Collalbanegra.Col6.1
sample_progress
sequenced (16S)
sampling time
1
sampling_code_id
215
species name
Oenanthe leucura
staphylococcus_density
0
storing_days
1
unhatched_eggs
0
year
2007