1632.E2C10.Knight16sV4.JuannaBirdEMP.NoIndex.L005.R1.001.sequences; Bird Egg Shells from Spain
bird metagenome
Bird Egg Shells from nest Crialo.UTG2.1
ENA first public
2016-07-13
ENA last update
2016-07-13
External Id
SAMEA4076170
INSDC center alias
UCSDMI
INSDC center name
University of California San Diego Microbiome Initiative
INSDC first public
2016-07-13T17:01:27Z
INSDC last update
2016-07-13T01:15:00Z
INSDC status
public
Submitter Id
qiita_sid_1632:1632.E2C10.Knight16sV4.JuannaBirdEMP.NoIndex.L005.R1.001.sequences
abandoned
No
altitude
0
anonymized name
E2C10
arcsine_fledge_success_brood
0.100167421
arcsine_fledge_success_clutch
0.100167421
arcsine_hatching_success
Missing: Not collected
area
Torre Guajar
assigned_from_geo
TRUE
backup
FALSE
bird_family
Cuculidae
bird_order
Cuculiformes
broken_eggs
0
brood_size
3
clutch_size
3
code_id_statistica
257
coll_date_juliane_days
120
collection date
5/1/07 0:00
collection_timestamp
5/1/07
common name
organismal metagenome
country
GAZ:Spain
country_nation
Spain
country_region
Hoya de Guadix
culturing_date
5/4/07
depth
0
dna_extracted
TRUE
elevation
1039
empo_0
EMP sample
empo_1
Host-associated
empo_2
Animal
empo_3
Animal surface
enterobacteriaceae_density
577737125.9
enterococcus_density
8.228377247
env biome
mediterranean shrubland biome
env feature
nest of bird
env matter
egg
env package
host-associated
eppendorf_name
UTG 2.3
estefania_plates
2C10
extracted DNA avail now
TRUE
feathers
FALSE
fledge_success_brood
1
fledge_success_clutch
1
fledging_date
5/23/07
geo loc name
Spain:Hoya de Guadix
hatching_date
5/9/07
hatching_success
Missing: Not collected
hatching_synchrony
asyn
host common name
Great-spotted cuckoo
host scientific name
Cuculiformes
host subject id
Crialo.UTG2.1
host taxid
78203
latitude
37.38953889
lay_date_juliane_days
Missing: Not provided
laying_date
Missing: Not provided
log_enterobacteriaceae_density
8.761730277
log_enterococcus_density
0.96512534
log_mesophiles_density
7.211699312
log_rel_growth_enterobact
-3.391407291
log_rel_growth_enterococcus
2.743147865
log_rel_growth_mesophiles
-0.477121201
log_rel_growth_staphylococcus
0.130379998
log_staphylococcus_density
0
longitude
-3.098552778
mesophiles_density
16281682.64
nest_type
open
number_fledging
3
number_sampled_eggs
3
observer
Juanma
physical_location_1
U Granada
physical_specimen_location
CCME
physical_specimen_remaining
TRUE
plants
TRUE
platero_plates
P2E5
predated
No
public
TRUE
rel_growth_enterobacteriaceae
-0.999593938
rel_growth_enterococcus
552.5385409
rel_growth_staphylococcus
0.350143713
relative_growth_mesophiles
-0.666666626
required_sample_info_status
completed
sample name
qiita_sid_1632:1632.E2C10.Knight16sV4.JuannaBirdEMP.NoIndex.L005.R1.001.sequences
sample type
bird egg shell
sample_nest
Crialo.UTG2.1
sample_progress
sequenced (16S)
sampling time
1
sampling_code_id
163
species name
Clamator glandarius
staphylococcus_density
0
storing_days
3
unhatched_eggs
0
year
2007