Bird Egg Shells from Spain; 1632.E5E01.Knight16sV4.JuannaBirdEMP.NoIndex.L005.R1.001.sequences
bird metagenome
Bird Egg Shells from nest Carbonero.Bec6.2
ENA first public
2016-07-13
ENA last update
2016-07-13
External Id
SAMEA4076515
INSDC center alias
UCSDMI
INSDC center name
University of California San Diego Microbiome Initiative
INSDC first public
2016-07-13T17:01:27Z
INSDC last update
2016-07-13T01:15:11Z
INSDC status
public
Submitter Id
qiita_sid_1632:1632.E5E01.Knight16sV4.JuannaBirdEMP.NoIndex.L005.R1.001.sequences
abandoned
No
altitude
0
anonymized name
E5E01
arcsine_fledge_success_brood
0.088306435
arcsine_fledge_success_clutch
0.083763922
arcsine_hatching_success
1.570796327
area
Cortijo Becerra
assigned_from_geo
TRUE
backup
TRUE
bird_family
Paridae
bird_order
Passeriformes
broken_eggs
0
brood_size
10
clutch_size
10
code_id_statistica
114
coll_date_juliane_days
141
collection date
5/22/07 0:00
collection_timestamp
5/22/07
common name
organismal metagenome
country
GAZ:Spain
country_nation
Spain
country_region
Hoya de Guadix
culturing_date
5/29/07
depth
0
dna_extracted
TRUE
elevation
992
empo_0
EMP sample
empo_1
Host-associated
empo_2
Animal
empo_3
Animal surface
enterobacteriaceae_density
1380818.016
enterococcus_density
2.649310407
env biome
mediterranean shrubland biome
env feature
nest of bird
env matter
egg
env package
host-associated
eppendorf_name
BEC6.2
estefania_plates
5.00E+01
extracted DNA avail now
TRUE
feathers
TRUE
fledge_success_brood
0.777777778
fledge_success_clutch
0.7
fledging_date
6/8/07
geo loc name
Spain:Hoya de Guadix
hatching_date
5/25/07
hatching_success
1
hatching_synchrony
asyn
host common name
Great tit
host scientific name
Passeriformes
host subject id
Carbonero.Bec6.2
host taxid
9157
latitude
37.43306389
lay_date_juliane_days
121
laying_date
7/31/07
log_enterobacteriaceae_density
6.140136759
log_enterococcus_density
0.562210806
log_mesophiles_density
6.918287747
log_rel_growth_enterobact
-0.301029838
log_rel_growth_enterococcus
-4.587474034
log_rel_growth_mesophiles
-0.015794265
log_rel_growth_staphylococcus
0
log_staphylococcus_density
0
longitude
-3.103047222
mesophiles_density
8284908.093
nest_type
hole
number_fledging
7
number_sampled_eggs
10
observer
Juanma
physical_specimen_location
CCME
physical_specimen_remaining
TRUE
plants
FALSE
platero_plates
P4E12
predated
No
public
TRUE
rel_growth_enterobacteriaceae
-0.499999819
rel_growth_enterococcus
-0.999974146
rel_growth_staphylococcus
0
relative_growth_mesophiles
-0.035714282
required_sample_info_status
completed
sample name
qiita_sid_1632:1632.E5E01.Knight16sV4.JuannaBirdEMP.NoIndex.L005.R1.001.sequences
sample type
bird egg shell
sample_nest
Carbonero.Bec6.2
sample_progress
sequenced (16S)
sampling time
2
sampling_code_id
481
species name
Parus major
staphylococcus_density
0
storing_days
7
unhatched_eggs
0
year
2007