Dual RNA sequencing of the leafcutter ant cuticle
Acromyrmex echinatior
Dual RNA sequencing reads from the laterocervical plates of A. echinatior leaf cutter ants to investigate gene expression by the ant host and the Pseudonocardia (bacterial) symbiont. Colonies were associated with Pseudonocardia echinatior (088) or Pseudonocardia octospinosus (1083).
ENA-FIRST-PUBLIC
2019-06-05T17:04:28Z
ENA-LAST-UPDATE
2019-06-05T11:46:56Z
External Id
SAMEA5693624
INSDC center name
UNIVERSITY OF EAST ANGLIA, UK
INSDC first public
2019-06-05T17:04:28Z
INSDC last update
2019-06-05T11:46:56Z
INSDC status
public
Submitter Id
Cuticle_sample_PS1083
collection date
2018
common name
Panamanian leafcutter ant
environment (biome)
A. echinatior leafcutter ant colony
environment (feature)
A. echinatior leafcutter ant cuticle
environment (material)
A. echinatior leafcutter ant laterocervical plates of the propleura
geographic location (country and/or sea)
United Kingdom
geographic location (latitude)
52.6219
geographic location (longitude)
1.2392
host-associated environmental package
host-associated
investigation type
metatranscriptome
project name
Dual RNA sequencing of the A. echinatior cuticular microbiome
sample name
Cuticle_sample_PS1083
scientific_name
Acromyrmex echinatior
sequencing method
Dual RNA sequencing with Illumina NextSeq 500 technology