1632.E4B03.Knight16sV4.JuannaBirdEMP.NoIndex.L005.R1.001.sequences; Bird Egg Shells from Spain
bird metagenome
Bird Egg Shells from nest Abubilla.712.1
ENA first public
2016-07-13
ENA last update
2016-07-13
External Id
SAMEA4076375
INSDC center alias
UCSDMI
INSDC center name
University of California San Diego Microbiome Initiative
INSDC first public
2016-07-13T17:01:27Z
INSDC last update
2016-07-13T01:15:07Z
INSDC status
public
Submitter Id
qiita_sid_1632:1632.E4B03.Knight16sV4.JuannaBirdEMP.NoIndex.L005.R1.001.sequences
altitude
0
anonymized name
E4B03
arcsine_fledge_success_brood
Missing: Not collected
arcsine_fledge_success_clutch
Missing: Not collected
arcsine_hatching_success
0.785398163
area
Via
assigned_from_geo
TRUE
backup
FALSE
bird_family
Upuidae
bird_order
Upupiformes
broken_eggs
0
brood_size
1
clutch_size
2
code_id_statistica
26
coll_date_juliane_days
133
collection date
5/14/07 0:00
collection_timestamp
5/14/07
common name
organismal metagenome
country
GAZ:Spain
country_nation
Spain
country_region
Hoya de Guadix
culturing_date
5/22/07
depth
0
dna_extracted
TRUE
elevation
947
empo_0
EMP sample
empo_1
Host-associated
empo_2
Animal
empo_3
Animal surface
enterobacteriaceae_density
3528632.123
enterococcus_density
60490.83639
env biome
mediterranean shrubland biome
env feature
nest of bird
env matter
egg
env package
host-associated
eppendorf_name
CAJA 812
estefania_plates
4B03
extracted DNA avail now
TRUE
feathers
FALSE
fledge_success_brood
Missing: Not collected
fledge_success_clutch
Missing: Not collected
fledging_date
Missing: Not collected
geo loc name
Spain:Hoya de Guadix
hatching_date
5/24/07
hatching_success
0.5
hatching_synchrony
asyn
host common name
Eurasian hoopoe
host scientific name
Upupiformes
host subject id
Abubilla.712.1
host taxid
57439
latitude
37.31146944
lay_date_juliane_days
124
laying_date
8/3/07
log_enterobacteriaceae_density
6.547606506
log_enterococcus_density
4.781696769
log_mesophiles_density
7.47336037
log_rel_growth_enterobact
Missing: Not provided
log_rel_growth_enterococcus
Missing: Not provided
log_rel_growth_mesophiles
Missing: Not provided
log_rel_growth_staphylococcus
Missing: Not provided
log_staphylococcus_density
2.92051412
longitude
-3.119497222
mesophiles_density
29741327.89
nest_type
hole
number_fledging
Missing: Not provided
number_sampled_eggs
2
observer
Manolo
physical_specimen_location
CCME
physical_specimen_remaining
TRUE
plants
FALSE
platero_plates
P3F010
public
TRUE
required_sample_info_status
completed
sample name
qiita_sid_1632:1632.E4B03.Knight16sV4.JuannaBirdEMP.NoIndex.L005.R1.001.sequences
sample type
bird egg shell
sample_nest
Abubilla.712.1
sample_progress
sequenced (16S)
sampling time
1
sampling_code_id
355
species name
Upupa epops
staphylococcus_density
831.7490003
storing_days
8
unhatched_eggs
1
year
2007