1632.E4C12.Knight16sV4.JuannaBirdEMP.NoIndex.L005.R1.001.sequences; Bird Egg Shells from Spain
bird metagenome
Bird Egg Shells from nest Carbonero.Teg22.1
ENA first public
2016-07-13
ENA last update
2016-07-13
External Id
SAMEA4076397
INSDC center alias
UCSDMI
INSDC center name
University of California San Diego Microbiome Initiative
INSDC first public
2016-07-13T17:01:27Z
INSDC last update
2016-07-13T01:15:07Z
INSDC status
public
Submitter Id
qiita_sid_1632:1632.E4C12.Knight16sV4.JuannaBirdEMP.NoIndex.L005.R1.001.sequences
abandoned
No
altitude
0
anonymized name
E4C12
arcsine_fledge_success_brood
0.100167421
arcsine_fledge_success_clutch
0.088306435
arcsine_hatching_success
1.079913649
area
Tegeda
assigned_from_geo
TRUE
backup
TRUE
bird_family
Paridae
bird_order
Passeriformes
broken_eggs
0
brood_size
7
clutch_size
9
code_id_statistica
128
coll_date_juliane_days
145
collection date
5/26/07 0:00
collection_timestamp
5/26/07
common name
organismal metagenome
country
GAZ:Spain
country_nation
Spain
country_region
Hoya de Guadix
culturing_date
5/28/07
depth
0
dna_extracted
TRUE
elevation
977
empo_0
EMP sample
empo_1
Host-associated
empo_2
Animal
empo_3
Animal surface
enterobacteriaceae_density
0.822213196
enterococcus_density
0
env biome
mediterranean shrubland biome
env feature
nest of bird
env matter
egg
env package
host-associated
eppendorf_name
Teg 2.2 Carbonero
estefania_plates
4C12
extracted DNA avail now
TRUE
feathers
TRUE
fledge_success_brood
1
fledge_success_clutch
0.777777778
fledging_date
6/18/07
geo loc name
Spain:Hoya de Guadix
hatching_date
6/9/07
hatching_success
0.777777778
hatching_synchrony
asyn
host common name
Great tit
host scientific name
Passeriformes
host subject id
Carbonero.Teg22.1
host taxid
9157
latitude
37.29330833
lay_date_juliane_days
137
laying_date
8/16/07
log_enterobacteriaceae_density
0.260599187
log_enterococcus_density
0
log_mesophiles_density
0.708511487
log_rel_growth_enterobact
3.751337522
log_rel_growth_enterococcus
0.301029996
log_rel_growth_mesophiles
6.604412985
log_rel_growth_staphylococcus
0
log_staphylococcus_density
0
longitude
-3.106508333
mesophiles_density
4.11106598
nest_type
hole
number_fledging
7
number_sampled_eggs
9
observer
Juan
physical_specimen_location
CCME
physical_specimen_remaining
TRUE
plants
FALSE
platero_plates
P4E1
predated
No
public
TRUE
rel_growth_enterobacteriaceae
5639.758706
rel_growth_enterococcus
1
rel_growth_staphylococcus
0
relative_growth_mesophiles
4021729.688
required_sample_info_status
completed
sample name
qiita_sid_1632:1632.E4C12.Knight16sV4.JuannaBirdEMP.NoIndex.L005.R1.001.sequences
sample type
bird egg shell
sample_nest
Carbonero.Teg22.1
sample_progress
sequenced (16S)
sampling time
1
sampling_code_id
385
species name
Parus major
staphylococcus_density
0
storing_days
2
unhatched_eggs
2
year
2007