Bird Egg Shells from Spain; 1632.E2H04.r.EMPbird.v4.NoIndex.L001
bird metagenome
Bird Egg Shells from nest Urraca.UCON11.1
ENA first public
2016-07-13
ENA last update
2016-07-13
External Id
SAMEA4076230
INSDC center alias
UCSDMI
INSDC center name
University of California San Diego Microbiome Initiative
INSDC first public
2016-07-13T17:01:27Z
INSDC last update
2016-07-13T01:15:02Z
INSDC status
public
Submitter Id
qiita_sid_1632:1632.E2H04.r.EMPbird.v4.NoIndex.L001
abandoned
No
altitude
0
anonymized name
E2H04
arcsine_fledge_success_brood
Missing: Not collected
arcsine_fledge_success_clutch
Missing: Not collected
arcsine_hatching_success
Missing: Not collected
area
Cortijo Conejo
assigned_from_geo
TRUE
backup
FALSE
bird_family
Corvidae
bird_order
Passeriformes
broken_eggs
Missing: Not collected
brood_size
Missing: Not collected
clutch_size
7
code_id_statistica
553
coll_date_juliane_days
114
collection date
4/25/07 0:00
collection_timestamp
4/25/07
comments_in_spanish
6pollos
common name
organismal metagenome
country
GAZ:Spain
country_nation
Spain
country_region
Hoya de Guadix
culturing_date
5/1/07
depth
0
dna_extracted
TRUE
elevation
1055
empo_0
EMP sample
empo_1
Host-associated
empo_2
Animal
empo_3
Animal surface
enterobacteriaceae_density
5.771622195
enterococcus_density
0.295980625
env biome
mediterranean shrubland biome
env feature
nest of bird
env matter
egg
env package
host-associated
eppendorf_name
UCON 11.1
estefania_plates
2H04
extracted DNA avail now
TRUE
feathers
FALSE
fledge_success_brood
Missing: Not collected
fledge_success_clutch
Missing: Not collected
fledging_date
5/24/07
geo loc name
Spain:Hoya de Guadix
hatching_date
5/4/07
hatching_success
Missing: Not collected
hatching_synchrony
asyn
host common name
Black-billed Magpie
host scientific name
Passeriformes
host subject id
Urraca.UCON11.1
host taxid
34924
latitude
37.40583611
lay_date_juliane_days
107
laying_date
7/17/07
log_enterobacteriaceae_density
0.83069272
log_enterococcus_density
0.112598509
log_mesophiles_density
7.846926904
log_rel_growth_enterobact
5.637266159
log_rel_growth_enterococcus
0.200761493
log_rel_growth_mesophiles
-1.00735704
log_rel_growth_staphylococcus
0.524309523
log_staphylococcus_density
0.031002323
longitude
-3.082122222
mesophiles_density
70295398.53
nest_type
open
number_fledging
4
number_sampled_eggs
7
observer
Juanma
physical_location_1
U Granada
physical_specimen_location
CCME
physical_specimen_remaining
TRUE
plants
TRUE
predated
No
public
TRUE
rel_growth_enterobacteriaceae
433775.6389
rel_growth_enterococcus
0.587674584
rel_growth_staphylococcus
2.344333066
relative_growth_mesophiles
-0.901679753
required_sample_info_status
completed
sample name
qiita_sid_1632:1632.E2H04.r.EMPbird.v4.NoIndex.L001
sample type
bird egg shell
sample_nest
Urraca.UCON11.1
sample_progress
sequenced (16S)
sampling time
1
sampling_code_id
124
species name
Pica pica
staphylococcus_density
0.073995156
storing_days
6
unhatched_eggs
Missing: Not provided
year
2007