Bird Egg Shells from Spain; 1632.E5H05.Knight16sV4.JuannaBirdEMP.NoIndex.L005.R1.001.sequences
bird metagenome
Bird Egg Shells from nest Gorrionmolinero.Gor4.1
ENA first public
2016-07-13
ENA last update
2016-07-13
External Id
SAMEA4076557
INSDC center alias
UCSDMI
INSDC center name
University of California San Diego Microbiome Initiative
INSDC first public
2016-07-13T17:01:27Z
INSDC last update
2016-07-13T01:15:13Z
INSDC status
public
Submitter Id
qiita_sid_1632:1632.E5H05.Knight16sV4.JuannaBirdEMP.NoIndex.L005.R1.001.sequences
abandoned
No
altitude
0
anonymized name
E5H05
arcsine_fledge_success_brood
Missing: Not collected
arcsine_fledge_success_clutch
Missing: Not collected
arcsine_hatching_success
Missing: Not collected
area
Calahorra
assigned_from_geo
TRUE
backup
TRUE
bird_family
Passeridae
bird_order
Passeriformes
broken_eggs
Missing: Not collected
brood_size
Missing: Not collected
clutch_size
5
code_id_statistica
348
coll_date_juliane_days
143
collection date
5/24/07 0:00
collection_timestamp
5/24/07
comments_in_spanish
Depredado
common name
organismal metagenome
country
GAZ:Spain
country_nation
Spain
country_region
Hoya de Guadix
culturing_date
5/28/07
depth
0
dna_extracted
TRUE
elevation
1106
empo_0
EMP sample
empo_1
Host-associated
empo_2
Animal
empo_3
Animal surface
enterobacteriaceae_density
6.961182836
enterococcus_density
1.160197139
env biome
mediterranean shrubland biome
env feature
nest of bird
env matter
egg
env package
host-associated
eppendorf_name
GOR 4
estefania_plates
5H05
extracted DNA avail now
TRUE
feathers
TRUE
fledge_success_brood
Missing: Not collected
fledge_success_clutch
Missing: Not collected
fledging_date
Missing: Not collected
geo loc name
Spain:Hoya de Guadix
hatching_date
Missing: Not collected
hatching_success
Missing: Not collected
hatching_synchrony
syn
host common name
Eurasian tree sparrow
host scientific name
Passeriformes
host subject id
Gorrionmolinero.Gor4.1
host taxid
9160
latitude
37.25371111
lay_date_juliane_days
137
laying_date
8/16/07
log_enterobacteriaceae_density
0.900977598
log_enterococcus_density
0.334493387
log_mesophiles_density
8.099961532
log_rel_growth_enterobact
Missing: Not provided
log_rel_growth_enterococcus
Missing: Not provided
log_rel_growth_mesophiles
Missing: Not provided
log_rel_growth_staphylococcus
Missing: Not provided
log_staphylococcus_density
0.110606302
longitude
-3.029825
mesophiles_density
125881389.6
nest_type
hole
number_fledging
Missing: Not provided
number_sampled_eggs
5
observer
Marta
physical_specimen_location
CCME
physical_specimen_remaining
TRUE
plants
TRUE
platero_plates
P4H011
predated
egg phase
public
TRUE
required_sample_info_status
completed
sample name
qiita_sid_1632:1632.E5H05.Knight16sV4.JuannaBirdEMP.NoIndex.L005.R1.001.sequences
sample type
bird egg shell
sample_nest
Gorrionmolinero.Gor4.1
sample_progress
sequenced (16S)
sampling time
1
sampling_code_id
376
species name
Passer montanus
staphylococcus_density
0.290049285
storing_days
4
unhatched_eggs
Missing: Not provided
year
2007