1632.E2D08.Knight16sV4.JuannaBirdEMP.NoIndex.L005.R1.001.sequences; Bird Egg Shells from Spain
bird metagenome
Bird Egg Shells from nest Abubilla.51.2
ENA first public
2016-07-13
ENA last update
2016-07-13
External Id
SAMEA4076182
INSDC center alias
UCSDMI
INSDC center name
University of California San Diego Microbiome Initiative
INSDC first public
2016-07-13T17:01:26Z
INSDC last update
2016-07-13T01:15:01Z
INSDC status
public
Submitter Id
qiita_sid_1632:1632.E2D08.Knight16sV4.JuannaBirdEMP.NoIndex.L005.R1.001.sequences
abandoned
No
altitude
0
anonymized name
E2D08
arcsine_fledge_success_brood
0.086711161
arcsine_fledge_success_clutch
0.061275582
arcsine_hatching_success
Missing: Not collected
area
Cortijo Perro
assigned_from_geo
TRUE
backup
FALSE
bird_family
Upuidae
bird_order
Upupiformes
broken_eggs
0
brood_size
4
clutch_size
8
code_id_statistica
18
coll_date_juliane_days
117
collection date
4/28/07 0:00
collection_timestamp
4/28/07
common name
organismal metagenome
country
GAZ:Spain
country_nation
Spain
country_region
Hoya de Guadix
culturing_date
5/1/07
depth
0
dna_extracted
TRUE
elevation
1160
empo_0
EMP sample
empo_1
Host-associated
empo_2
Animal
empo_3
Animal surface
enterobacteriaceae_density
7115264.804
enterococcus_density
94.62190532
env biome
mediterranean shrubland biome
env feature
nest of bird
env matter
egg
env package
host-associated
eppendorf_name
51.1 (28/04)
estefania_plates
2D08
extracted DNA avail now
TRUE
feathers
FALSE
fledge_success_brood
0.75
fledge_success_clutch
0.375
fledging_date
5/28/07
geo loc name
Spain:Hoya de Guadix
hatching_date
5/5/07
hatching_success
Missing: Not collected
hatching_synchrony
asyn
host common name
Eurasian hoopoe
host scientific name
Upupiformes
host subject id
Abubilla.51.2
host taxid
57439
latitude
37.32654722
lay_date_juliane_days
99
laying_date
7/9/07
log_enterobacteriaceae_density
6.852191129
log_enterococcus_density
1.980557393
log_mesophiles_density
7.294973321
log_rel_growth_enterobact
Missing: Not provided
log_rel_growth_enterococcus
Missing: Not provided
log_rel_growth_mesophiles
Missing: Not provided
log_rel_growth_staphylococcus
Missing: Not provided
log_staphylococcus_density
1.356413718
longitude
-3.059219444
mesophiles_density
19723014.72
nest_type
hole
number_fledging
3
number_sampled_eggs
8
observer
Manolo
physical_location_1
U Granada
physical_specimen_location
CCME
physical_specimen_remaining
TRUE
plants
FALSE
platero_plates
P2D03
predated
No
public
TRUE
required_sample_info_status
completed
sample name
qiita_sid_1632:1632.E2D08.Knight16sV4.JuannaBirdEMP.NoIndex.L005.R1.001.sequences
sample type
bird egg shell
sample_nest
Abubilla.51.2
sample_progress
sequenced (16S)
sampling time
2
sampling_code_id
148
species name
Upupa epops
staphylococcus_density
21.72028203
storing_days
3
unhatched_eggs
4
year
2007