1632.E6G08.Knight16sV4.JuannaBirdEMP.NoIndex.L005.R1.001.sequences; Bird Egg Shells from Spain
bird metagenome
Bird Egg Shells from nest Gorrionchillon.Chi9.1
ENA first public
2016-07-13
ENA last update
2016-07-13
External Id
SAMEA4076631
INSDC center alias
UCSDMI
INSDC center name
University of California San Diego Microbiome Initiative
INSDC first public
2016-07-13T17:01:26Z
INSDC last update
2016-07-13T01:15:15Z
INSDC status
public
Submitter Id
qiita_sid_1632:1632.E6G08.Knight16sV4.JuannaBirdEMP.NoIndex.L005.R1.001.sequences
altitude
0
anonymized name
E6G08
arcsine_fledge_success_brood
Missing: Not collected
arcsine_fledge_success_clutch
Missing: Not collected
arcsine_hatching_success
Missing: Not collected
area
Rambla Zaraguil
assigned_from_geo
TRUE
backup
TRUE
bird_family
Passeridae
bird_order
Passeriformes
broken_eggs
Missing: Not collected
brood_size
Missing: Not collected
clutch_size
7
code_id_statistica
323
coll_date_juliane_days
158
collection date
6/8/07 0:00
collection_timestamp
6/8/08
comments_in_spanish
Sin datos de los pollos
common name
organismal metagenome
country
GAZ:Spain
country_nation
Spain
country_region
Hoya de Guadix
culturing_date
6/26/07
depth
0
dna_extracted
TRUE
elevation
1092
empo_0
EMP sample
empo_1
Host-associated
empo_2
Animal
empo_3
Animal surface
enterobacteriaceae_density
252720.5204
enterococcus_density
0
env biome
mediterranean shrubland biome
env feature
nest of bird
env matter
egg
env package
host-associated
eppendorf_name
CHI 9.1
estefania_plates
6G08
extracted DNA avail now
TRUE
feathers
TRUE
fledge_success_brood
Missing: Not collected
fledge_success_clutch
Missing: Not collected
fledging_date
Missing: Not collected
geo loc name
Spain:Hoya de Guadix
hatching_date
Missing: Not collected
hatching_success
Missing: Not collected
hatching_synchrony
asyn
host common name
Rock Sparrow
host scientific name
Passeriformes
host subject id
Gorrionchillon.Chi9.1
host taxid
150913
latitude
37.31888611
lay_date_juliane_days
Missing: Not provided
laying_date
Missing: Not provided
log_enterobacteriaceae_density
5.402642226
log_enterococcus_density
0
log_mesophiles_density
6.760285996
log_rel_growth_enterobact
Missing: Not provided
log_rel_growth_enterococcus
Missing: Not provided
log_rel_growth_mesophiles
Missing: Not provided
log_rel_growth_staphylococcus
Missing: Not provided
log_staphylococcus_density
0
longitude
-3.087372222
mesophiles_density
5758189.072
nest_type
hole
number_fledging
Missing: Not provided
number_sampled_eggs
7
observer
Juanma
physical_specimen_location
CCME
physical_specimen_remaining
TRUE
plants
TRUE
platero_plates
P6C010
public
TRUE
required_sample_info_status
completed
sample name
qiita_sid_1632:1632.E6G08.Knight16sV4.JuannaBirdEMP.NoIndex.L005.R1.001.sequences
sample type
bird egg shell
sample_nest
Gorrionchillon.Chi9.1
sample_progress
sequenced (16S)
sampling time
1
sampling_code_id
573
species name
Petronia petronia
staphylococcus_density
0
storing_days
18
unhatched_eggs
Missing: Not provided
year
2007