Bird Egg Shells from Spain; 1632.E5D06.Knight16sV4.JuannaBirdEMP.NoIndex.L005.R1.001.sequences
bird metagenome
Bird Egg Shells from nest Estornino.E4.1
ENA first public
2016-07-13
ENA last update
2016-07-13
External Id
SAMEA4076507
INSDC center alias
UCSDMI
INSDC center name
University of California San Diego Microbiome Initiative
INSDC first public
2016-07-13T17:01:26Z
INSDC last update
2016-07-13T01:15:11Z
INSDC status
public
Submitter Id
qiita_sid_1632:1632.E5D06.Knight16sV4.JuannaBirdEMP.NoIndex.L005.R1.001.sequences
altitude
0
anonymized name
E5D06
arcsine_fledge_success_brood
Missing: Not collected
arcsine_fledge_success_clutch
Missing: Not collected
arcsine_hatching_success
1.107148718
area
Calahorra
assigned_from_geo
TRUE
backup
TRUE
bird_family
Sturnidae
bird_order
Passeriformes
broken_eggs
0
brood_size
4
clutch_size
5
code_id_statistica
276
coll_date_juliane_days
149
collection date
5/30/07 0:00
collection_timestamp
5/30/07
common name
organismal metagenome
country
GAZ:Spain
country_nation
Spain
country_region
Hoya de Guadix
culturing_date
6/13/07
depth
0
dna_extracted
TRUE
elevation
1106
empo_0
EMP sample
empo_1
Host-associated
empo_2
Animal
empo_3
Animal surface
enterobacteriaceae_density
13194361
enterococcus_density
13.31541018
env biome
mediterranean shrubland biome
env feature
nest of bird
env matter
egg
env package
host-associated
eppendorf_name
StE4
estefania_plates
5D06
extracted DNA avail now
TRUE
feathers
TRUE
fledge_success_brood
Missing: Not collected
fledge_success_clutch
Missing: Not collected
fledging_date
Missing: Not collected
geo loc name
Spain:Hoya de Guadix
hatching_date
6/10/07
hatching_success
0.8
hatching_synchrony
syn
host common name
Sptoless starling
host scientific name
Passeriformes
host subject id
Estornino.E4.1
host taxid
381112
latitude
37.25371111
lay_date_juliane_days
144
laying_date
8/23/07
log_enterobacteriaceae_density
7.120388395
log_enterococcus_density
1.155803796
log_mesophiles_density
7.986051856
log_rel_growth_enterobact
0.786699308
log_rel_growth_enterococcus
2.27965938
log_rel_growth_mesophiles
-0.91631822
log_rel_growth_staphylococcus
0
log_staphylococcus_density
0
longitude
-3.029825
mesophiles_density
96839346.76
nest_type
hole
number_fledging
Missing: Not provided
number_sampled_eggs
5
observer
Carlos
physical_specimen_location
CCME
physical_specimen_remaining
TRUE
plants
TRUE
platero_plates
P5A05
public
TRUE
rel_growth_enterobacteriaceae
5.119265667
rel_growth_enterococcus
189.396684
rel_growth_staphylococcus
0
relative_growth_mesophiles
-0.878749991
required_sample_info_status
completed
sample name
qiita_sid_1632:1632.E5D06.Knight16sV4.JuannaBirdEMP.NoIndex.L005.R1.001.sequences
sample type
bird egg shell
sample_nest
Estornino.E4.1
sample_progress
sequenced (16S)
sampling time
1
sampling_code_id
487
species name
Sturnus unicolor
staphylococcus_density
0
storing_days
14
unhatched_eggs
1
year
2007