Metagenome-Assembled Genome (MAG)
uncultured Bacteroides sp.
This sample represents a MAG from the metagenomic run ERR1293513
ENA-FIRST-PUBLIC
2019-05-01T04:04:12Z
ENA-LAST-UPDATE
2019-03-18T18:14:50Z
External Id
SAMEA5474267
INSDC center name
EBI
INSDC first public
2019-05-01T04:04:12Z
INSDC last update
2019-03-18T18:14:50Z
INSDC status
public
Submitter Id
MAG-GUT49773
assembly quality
Many fragments with little to no review of assembly other than reporting of standard assembly statistics
assembly software
SPAdes;3.10.0
binning parameters
default
binning software
MetaBAT v2.12.1
collection date
not provided
common name
uncultured Bacteroides sp.
completeness score
78.25
completeness software
CheckM v1.0.7
contamination score
1.86
environment (biome)
human-associated habitat
environment (feature)
human gut
environment (material)
faeces
geographic location (country and/or sea)
USA
geographic location (latitude)
37.0902
geographic location (longitude)
-95.7129
investigation type
metagenome-assembled genome
isolation source
human gut
metagenomic source
human gut metagenome
project name
Human gut MAGs
sample derived from
SAMEA3879504
sample name
MAG-GUT49773
scientific_name
uncultured Bacteroides sp.
sequencing method
Illumina
taxonomic identity marker
multi-marker approach