Bird Egg Shells from Spain; 1632.E3B10.Knight16sV4.JuannaBirdEMP.NoIndex.L005.R1.001.sequences
bird metagenome
Bird Egg Shells from nest Collalbanegra.Col3.2
ENA first public
2016-07-13
ENA last update
2016-07-13
External Id
SAMEA4076263
INSDC center alias
UCSDMI
INSDC center name
University of California San Diego Microbiome Initiative
INSDC first public
2016-07-13T17:01:27Z
INSDC last update
2016-07-13T01:15:03Z
INSDC status
public
Submitter Id
qiita_sid_1632:1632.E3B10.Knight16sV4.JuannaBirdEMP.NoIndex.L005.R1.001.sequences
abandoned
No
altitude
0
anonymized name
E3B10
arcsine_fledge_success_brood
0.081740653
arcsine_fledge_success_clutch
0.081740653
arcsine_hatching_success
1.047197551
area
Cortijo Perro
assigned_from_geo
TRUE
backup
FALSE
bird_family
Muscicapidae
bird_order
Passeriformes
broken_eggs
0
brood_size
3
clutch_size
3
code_id_statistica
189
coll_date_juliane_days
127
collection date
5/8/07 0:00
collection_timestamp
5/8/07
common name
organismal metagenome
country
GAZ:Spain
country_nation
Spain
country_region
Hoya de Guadix
culturing_date
5/12/07
depth
0
dna_extracted
TRUE
elevation
1160
empo_0
EMP sample
empo_1
Host-associated
empo_2
Animal
empo_3
Animal surface
enterobacteriaceae_density
1740479.512
enterococcus_density
1
env biome
mediterranean shrubland biome
env feature
nest of bird
env matter
egg
env package
host-associated
eppendorf_name
COL32
estefania_plates
3B10
extracted DNA avail now
TRUE
feathers
TRUE
fledge_success_brood
0.666666667
fledge_success_clutch
0.666666667
fledging_date
5/24/07
geo loc name
Spain:Hoya de Guadix
hatching_date
5/9/07
hatching_success
0.75
hatching_synchrony
asyn
host common name
Black weathear
host scientific name
Passeriformes
host subject id
Collalbanegra.Col3.2
host taxid
391703
latitude
37.32654722
lay_date_juliane_days
109
laying_date
7/19/07
log_enterobacteriaceae_density
6.240669165
log_enterococcus_density
0.301029996
log_mesophiles_density
6.378196961
log_rel_growth_enterobact
6.240669165
log_rel_growth_enterococcus
-1.635069477
log_rel_growth_mesophiles
-1.369745634
log_rel_growth_staphylococcus
0
log_staphylococcus_density
0
longitude
-3.059219444
mesophiles_density
2388893.448
nest_type
hole
number_fledging
2
number_sampled_eggs
3
observer
Juanma
physical_location_1
U Granada
physical_specimen_location
CCME
physical_specimen_remaining
TRUE
plants
FALSE
platero_plates
P3C05
predated
No
public
TRUE
rel_growth_enterobacteriaceae
1740479.512
rel_growth_enterococcus
-0.976829761
rel_growth_staphylococcus
0
relative_growth_mesophiles
-0.957317056
required_sample_info_status
completed
sample name
qiita_sid_1632:1632.E3B10.Knight16sV4.JuannaBirdEMP.NoIndex.L005.R1.001.sequences
sample type
bird egg shell
sample_nest
Collalbanegra.Col3.2
sample_progress
sequenced (16S)
sampling time
2
sampling_code_id
298
species name
Oenanthe leucura
staphylococcus_density
0
storing_days
4
unhatched_eggs
1
year
2007