1632.E4D06.Knight16sV4.JuannaBirdEMP.NoIndex.L005.R1.001.sequences; Bird Egg Shells from Spain
bird metagenome
Bird Egg Shells from nest Golondrinacomun.GolGua6.1
ENA first public
2016-07-13
ENA last update
2016-07-13
External Id
SAMEA4076403
INSDC center alias
UCSDMI
INSDC center name
University of California San Diego Microbiome Initiative
INSDC first public
2016-07-13T17:01:27Z
INSDC last update
2016-07-13T01:15:08Z
INSDC status
public
Submitter Id
qiita_sid_1632:1632.E4D06.Knight16sV4.JuannaBirdEMP.NoIndex.L005.R1.001.sequences
altitude
0
anonymized name
E4D06
arcsine_fledge_success_brood
Missing: Not collected
arcsine_fledge_success_clutch
Missing: Not collected
arcsine_hatching_success
1.107148718
area
Guadix
assigned_from_geo
TRUE
backup
TRUE
bird_family
Hirundinidae
bird_order
Passeriformes
broken_eggs
0
brood_size
4
clutch_size
5
code_id_statistica
309
coll_date_juliane_days
138
collection date
5/19/07 0:00
collection_timestamp
5/19/07
comments_in_spanish
Sin datos de los pollos
common name
organismal metagenome
country
GAZ:Spain
country_nation
Spain
country_region
Hoya de Guadix
culturing_date
5/29/07
depth
0
dna_extracted
TRUE
elevation
946
empo_0
EMP sample
empo_1
Host-associated
empo_2
Animal
empo_3
Animal surface
enterobacteriaceae_density
17.10396933
enterococcus_density
0
env biome
mediterranean shrubland biome
env feature
nest of bird
env matter
egg
env package
host-associated
eppendorf_name
GOL GUA 6.1
estefania_plates
4D06
extracted DNA avail now
TRUE
feathers
TRUE
fledge_success_brood
Missing: Not collected
fledge_success_clutch
Missing: Not collected
fledging_date
Missing: Not collected
geo loc name
Spain:Hoya de Guadix
hatching_date
6/2/07
hatching_success
0.8
hatching_synchrony
syn
host common name
Barn swallow
host scientific name
Passeriformes
host subject id
Golondrinacomun.GolGua6.1
host taxid
43150
latitude
37.29563056
lay_date_juliane_days
132
laying_date
8/11/07
log_enterobacteriaceae_density
1.257773805
log_enterococcus_density
0
log_mesophiles_density
5.748797844
log_rel_growth_enterobact
5.491023342
log_rel_growth_enterococcus
0.301029996
log_rel_growth_mesophiles
1.900366364
log_rel_growth_staphylococcus
0
log_staphylococcus_density
0
longitude
-3.133847222
mesophiles_density
560785.8797
nest_type
hole
number_fledging
Missing: Not provided
number_sampled_eggs
5
observer
Juanma
physical_specimen_location
CCME
physical_specimen_remaining
TRUE
plants
FALSE
platero_plates
P4A01
public
TRUE
rel_growth_enterobacteriaceae
309757.5781
rel_growth_enterococcus
1
rel_growth_staphylococcus
0
relative_growth_mesophiles
78.49986002
required_sample_info_status
completed
sample name
qiita_sid_1632:1632.E4D06.Knight16sV4.JuannaBirdEMP.NoIndex.L005.R1.001.sequences
sample type
bird egg shell
sample_nest
Golondrinacomun.GolGua6.1
sample_progress
sequenced (16S)
sampling time
1
sampling_code_id
429
species name
Hirundo rustica
staphylococcus_density
0
storing_days
10
unhatched_eggs
1
year
2007