Bird Egg Shells from Spain; 1632.E6D06.r.EMPbird.v4.NoIndex.L001
bird metagenome
Bird Egg Shells from nest Abubilla.803.2
ENA first public
2016-07-13
ENA last update
2016-07-13
External Id
SAMEA4076601
INSDC center alias
UCSDMI
INSDC center name
University of California San Diego Microbiome Initiative
INSDC first public
2016-07-13T17:01:27Z
INSDC last update
2016-07-13T01:15:14Z
INSDC status
public
Submitter Id
qiita_sid_1632:1632.E6D06.r.EMPbird.v4.NoIndex.L001
abandoned
No
altitude
0
anonymized name
E6D06
arcsine_fledge_success_brood
0.081740653
arcsine_fledge_success_clutch
0.05776715
arcsine_hatching_success
1.570796327
area
Benalua
assigned_from_geo
TRUE
backup
TRUE
bird_family
Upuidae
bird_order
Upupiformes
broken_eggs
0
brood_size
6
clutch_size
6
code_id_statistica
46
coll_date_juliane_days
161
collection date
6/11/07 0:00
collection_timestamp
6/11/07
comments_in_spanish
Sin datos de los pollos
common name
organismal metagenome
country
GAZ:Spain
country_nation
Spain
country_region
Hoya de Guadix
culturing_date
6/26/07
depth
0
dna_extracted
TRUE
elevation
908
empo_0
EMP sample
empo_1
Host-associated
empo_2
Animal
empo_3
Animal surface
enterobacteriaceae_density
712823.2882
enterococcus_density
89103.91103
env biome
mediterranean shrubland biome
env feature
nest of bird
env matter
egg
env package
host-associated
eppendorf_name
803
estefania_plates
6D05
extracted DNA avail now
TRUE
feathers
FALSE
fledge_success_brood
0.666666667
fledge_success_clutch
0.333333333
fledging_date
7/2/07
geo loc name
Spain:Hoya de Guadix
hatching_date
6/11/07
hatching_success
1
hatching_synchrony
asyn
host common name
Eurasian hoopoe
host scientific name
Upupiformes
host subject id
Abubilla.803.2
host taxid
57439
latitude
37.32783056
lay_date_juliane_days
139
laying_date
8/18/07
log_enterobacteriaceae_density
5.852982489
log_enterococcus_density
4.949901641
log_mesophiles_density
6.481370953
log_rel_growth_enterobact
-1.581209259
log_rel_growth_enterococcus
-0.698961231
log_rel_growth_mesophiles
-0.783791398
log_rel_growth_staphylococcus
-0.475886514
log_staphylococcus_density
0.071221164
longitude
-3.138858333
mesophiles_density
3029498.975
nest_type
hole
number_fledging
2
number_sampled_eggs
5
observer
Manolo
physical_specimen_location
CCME
physical_specimen_remaining
TRUE
plants
FALSE
platero_plates
P6A06
predated
No
public
TRUE
rel_growth_enterobacteriaceae
-0.973770456
rel_growth_enterococcus
-0.79999596
rel_growth_staphylococcus
-0.665717619
relative_growth_mesophiles
-0.835483826
required_sample_info_status
completed
sample name
qiita_sid_1632:1632.E6D06.r.EMPbird.v4.NoIndex.L001
sample type
bird egg shell
sample_nest
Abubilla.803.2
sample_progress
sequenced (16S)
sampling time
2
sampling_code_id
589
species name
Upupa epops
staphylococcus_density
0.178205822
storing_days
15
unhatched_eggs
0
year
2007