Metagenome-Assembled Genome (MAG)
uncultured Alistipes sp.
This sample represents a MAG from the metagenomic run ERR209812
ENA-FIRST-PUBLIC
2019-06-05T04:04:09Z
ENA-LAST-UPDATE
2019-03-18T18:38:57Z
External Id
SAMEA5499906
INSDC center name
EBI
INSDC first public
2019-06-05T04:04:09Z
INSDC last update
2019-03-18T18:38:57Z
INSDC status
public
Submitter Id
MAG-GUT72864
assembly quality
Many fragments with little to no review of assembly other than reporting of standard assembly statistics
assembly software
SPAdes;3.10.0
binning parameters
default
binning software
MetaBAT v2.12.1
collection date
not provided
common name
uncultured Alistipes sp.
completeness score
83.4
completeness software
CheckM v1.0.7
contamination score
1.20
environment (biome)
human-associated habitat
environment (feature)
human gut
environment (material)
faeces
geographic location (country and/or sea)
Spain
geographic location (latitude)
40.4637
geographic location (longitude)
-3.7492
investigation type
metagenome-assembled genome
isolation source
human gut
metagenomic source
human gut metagenome
project name
Human gut MAGs
sample derived from
SAMEA2042512
sample name
MAG-GUT72864
scientific_name
uncultured Alistipes sp.
sequencing method
Illumina
taxonomic identity marker
multi-marker approach