1632.E3A05.Knight16sV4.JuannaBirdEMP.NoIndex.L005.R1.001.sequences; Bird Egg Shells from Spain
bird metagenome
Bird Egg Shells from nest Urraca.cc8e.2
ENA first public
2016-07-13
ENA last update
2016-07-13
External Id
SAMEA4076245
INSDC center alias
UCSDMI
INSDC center name
University of California San Diego Microbiome Initiative
INSDC first public
2016-07-13T17:01:27Z
INSDC last update
2016-07-13T01:15:03Z
INSDC status
public
Submitter Id
qiita_sid_1632:1632.E3A05.Knight16sV4.JuannaBirdEMP.NoIndex.L005.R1.001.sequences
abandoned
No
altitude
0
anonymized name
E3A05
arcsine_fledge_success_brood
Missing: Not collected
arcsine_fledge_success_clutch
Missing: Not collected
arcsine_hatching_success
Missing: Not collected
area
Charches
assigned_from_geo
TRUE
backup
TRUE
bird_family
Corvidae
bird_order
Passeriformes
broken_eggs
Missing: Not collected
brood_size
Missing: Not collected
clutch_size
6
code_id_statistica
505
coll_date_juliane_days
124
collection date
5/5/07 0:00
collection_timestamp
5/5/07
comments_in_spanish
Parasitado sin datos del crialo
common name
organismal metagenome
country
GAZ:Spain
country_nation
Spain
country_region
Hoya de Guadix
culturing_date
5/20/07
depth
0
dna_extracted
TRUE
elevation
1310
empo_0
EMP sample
empo_1
Host-associated
empo_2
Animal
empo_3
Animal surface
enterobacteriaceae_density
601913449.7
enterococcus_density
1
env biome
mediterranean shrubland biome
env feature
nest of bird
env matter
egg
env package
host-associated
eppendorf_name
CC8E
estefania_plates
3A05
extracted DNA avail now
TRUE
feathers
FALSE
fledge_success_brood
Missing: Not collected
fledge_success_clutch
Missing: Not collected
fledging_date
Missing: Not collected
geo loc name
Spain:Hoya de Guadix
hatching_date
5/4/07
hatching_success
Missing: Not collected
hatching_synchrony
asyn
host common name
Black-billed Magpie
host scientific name
Passeriformes
host subject id
Urraca.cc8e.2
host taxid
34924
latitude
37.28454722
lay_date_juliane_days
99
laying_date
7/9/07
log_enterobacteriaceae_density
8.779534048
log_enterococcus_density
0.301029996
log_mesophiles_density
8.879999016
log_rel_growth_enterobact
8.779534048
log_rel_growth_enterococcus
0.301029996
log_rel_growth_mesophiles
7.554513257
log_rel_growth_staphylococcus
0
log_staphylococcus_density
0
longitude
-2.985819444
mesophiles_density
758575854.5
nest_type
open
number_fledging
Missing: Not provided
number_sampled_eggs
6
observer
Juan
physical_location_1
U Granada
physical_specimen_location
CCME
physical_specimen_remaining
TRUE
plants
TRUE
platero_plates
P8H012
predated
parasited
public
TRUE
rel_growth_enterobacteriaceae
601913449.7
rel_growth_enterococcus
1
rel_growth_staphylococcus
0
relative_growth_mesophiles
35851988.17
required_sample_info_status
completed
sample name
qiita_sid_1632:1632.E3A05.Knight16sV4.JuannaBirdEMP.NoIndex.L005.R1.001.sequences
sample type
bird egg shell
sample_nest
Urraca.cc8e.2
sample_progress
sequenced (16S)
sampling time
2
sampling_code_id
239
species name
Pica pica
staphylococcus_density
0
storing_days
15
unhatched_eggs
Missing: Not provided
year
2007