Bird Egg Shells from Spain; 1632.E3C12.Knight16sV4.JuannaBirdEMP.NoIndex.L005.R1.001.sequences
bird metagenome
Bird Egg Shells from nest Grajilla.Gra5.1
ENA first public
2016-07-13
ENA last update
2016-07-13
External Id
SAMEA4076280
INSDC center alias
UCSDMI
INSDC center name
University of California San Diego Microbiome Initiative
INSDC first public
2016-07-13T17:01:27Z
INSDC last update
2016-07-13T01:15:04Z
INSDC status
public
Submitter Id
qiita_sid_1632:1632.E3C12.Knight16sV4.JuannaBirdEMP.NoIndex.L005.R1.001.sequences
abandoned
No
altitude
0
anonymized name
E3C12
arcsine_fledge_success_brood
0.100167421
arcsine_fledge_success_clutch
0.089562407
arcsine_hatching_success
1.570796327
area
Rambla Zaraguil
assigned_from_geo
TRUE
backup
FALSE
bird_family
Corvidae
bird_order
Passeriformes
broken_eggs
0
brood_size
4
clutch_size
4
code_id_statistica
359
coll_date_juliane_days
131
collection date
5/12/07 0:00
collection_timestamp
5/12/07
common name
organismal metagenome
country
GAZ:Spain
country_nation
Spain
country_region
Hoya de Guadix
culturing_date
5/14/07
depth
0
dna_extracted
TRUE
elevation
1084
empo_0
EMP sample
empo_1
Host-associated
empo_2
Animal
empo_3
Animal surface
enterobacteriaceae_density
2486386.425
enterococcus_density
14500.15356
env biome
mediterranean shrubland biome
env feature
nest of bird
env matter
egg
env package
host-associated
eppendorf_name
GRA 5.1
estefania_plates
3C12
extracted DNA avail now
TRUE
feathers
TRUE
fledge_success_brood
1
fledge_success_clutch
0.8
fledging_date
6/16/07
geo loc name
Spain:Hoya de Guadix
hatching_date
5/25/07
hatching_success
1
hatching_synchrony
asyn
host common name
Jackdaw
host scientific name
Passeriformes
host subject id
Grajilla.Gra5.1
host taxid
30423
latitude
37.31888611
lay_date_juliane_days
120
laying_date
7/30/07
log_enterobacteriaceae_density
6.395568801
log_enterococcus_density
4.161402552
log_mesophiles_density
6.734387263
log_rel_growth_enterobact
-1.342419013
log_rel_growth_enterococcus
-2.218378265
log_rel_growth_mesophiles
-1.079180365
log_rel_growth_staphylococcus
0
log_staphylococcus_density
0.046502018
longitude
-3.087372222
mesophiles_density
5424843.109
nest_type
hole
number_fledging
4
number_sampled_eggs
4
observer
Juan
physical_location_1
U Granada
physical_specimen_location
CCME
physical_specimen_remaining
TRUE
plants
TRUE
platero_plates
P3D010
predated
No
public
TRUE
rel_growth_enterobacteriaceae
-0.954545071
rel_growth_enterococcus
-0.993951861
rel_growth_staphylococcus
0
relative_growth_mesophiles
-0.916666498
required_sample_info_status
completed
sample name
qiita_sid_1632:1632.E3C12.Knight16sV4.JuannaBirdEMP.NoIndex.L005.R1.001.sequences
sample type
bird egg shell
sample_nest
Grajilla.Gra5.1
sample_progress
sequenced (16S)
sampling time
1
sampling_code_id
308
species name
Corvus monedula
staphylococcus_density
0.113017565
storing_days
2
unhatched_eggs
0
year
2007