1632.E3B11.Knight16sV4.JuannaBirdEMP.NoIndex.L005.R1.001.sequences; Bird Egg Shells from Spain
bird metagenome
Bird Egg Shells from nest Carbonero.849a.1
ENA first public
2016-07-13
ENA last update
2016-07-13
External Id
SAMEA4076265
INSDC center alias
UCSDMI
INSDC center name
University of California San Diego Microbiome Initiative
INSDC first public
2016-07-13T17:01:27Z
INSDC last update
2016-07-13T01:15:03Z
INSDC status
public
Submitter Id
qiita_sid_1632:1632.E3B11.Knight16sV4.JuannaBirdEMP.NoIndex.L005.R1.001.sequences
altitude
0
anonymized name
E3B11
arcsine_fledge_success_brood
Missing: Not collected
arcsine_fledge_success_clutch
Missing: Not collected
arcsine_hatching_success
1.570796327
area
Cortijo Conejo
assigned_from_geo
TRUE
backup
FALSE
bird_family
Paridae
bird_order
Passeriformes
broken_eggs
0
brood_size
10
clutch_size
10
code_id_statistica
112
coll_date_juliane_days
125
collection date
5/6/07 0:00
collection_timestamp
5/6/07
comments_in_spanish
Sin datos de los pollos
common name
organismal metagenome
country
GAZ:Spain
country_nation
Spain
country_region
Hoya de Guadix
culturing_date
5/12/07
depth
0
dna_extracted
TRUE
elevation
1055
empo_0
EMP sample
empo_1
Host-associated
empo_2
Animal
empo_3
Animal surface
enterobacteriaceae_density
1384032.578
enterococcus_density
1546477.716
env biome
mediterranean shrubland biome
env feature
nest of bird
env matter
egg
env package
host-associated
eppendorf_name
849.1
estefania_plates
3B11
extracted DNA avail now
TRUE
feathers
TRUE
fledge_success_brood
Missing: Not collected
fledge_success_clutch
Missing: Not collected
fledging_date
Missing: Not collected
geo loc name
Spain:Hoya de Guadix
hatching_date
5/24/07
hatching_success
1
hatching_synchrony
asyn
host common name
Great tit
host scientific name
Passeriformes
host subject id
Carbonero.849a.1
host taxid
9157
latitude
37.40583611
lay_date_juliane_days
115
laying_date
7/25/07
log_enterobacteriaceae_density
6.141146627
log_enterococcus_density
6.189343947
log_mesophiles_density
7.324650091
log_rel_growth_enterobact
Missing: Not provided
log_rel_growth_enterococcus
Missing: Not provided
log_rel_growth_mesophiles
Missing: Not provided
log_rel_growth_staphylococcus
Missing: Not provided
log_staphylococcus_density
1.696649386
longitude
-3.082122222
mesophiles_density
21117867.97
nest_type
hole
number_fledging
Missing: Not provided
number_sampled_eggs
10
observer
Juanma
physical_location_1
U Granada
physical_specimen_location
CCME
physical_specimen_remaining
TRUE
plants
FALSE
platero_plates
P3D01
public
TRUE
required_sample_info_status
completed
sample name
qiita_sid_1632:1632.E3B11.Knight16sV4.JuannaBirdEMP.NoIndex.L005.R1.001.sequences
sample type
bird egg shell
sample_nest
Carbonero.849a.1
sample_progress
sequenced (16S)
sampling time
1
sampling_code_id
306
species name
Parus major
staphylococcus_density
48.73354147
storing_days
6
unhatched_eggs
0
year
2007