1632.E2C12.r.EMPbird.v4.NoIndex.L001; Bird Egg Shells from Spain
bird metagenome
Bird Egg Shells from nest Abubilla.52.1
ENA first public
2016-07-13
ENA last update
2016-07-13
External Id
SAMEA4076174
INSDC center alias
UCSDMI
INSDC center name
University of California San Diego Microbiome Initiative
INSDC first public
2016-07-13T17:01:27Z
INSDC last update
2016-07-13T01:15:00Z
INSDC status
public
Submitter Id
qiita_sid_1632:1632.E2C12.r.EMPbird.v4.NoIndex.L001
abandoned
No
altitude
0
anonymized name
E2C12
arcsine_fledge_success_brood
Missing: Not collected
arcsine_fledge_success_clutch
Missing: Not collected
arcsine_hatching_success
Missing: Not collected
area
Cortijo Perro
assigned_from_geo
TRUE
backup
FALSE
bird_family
Upuidae
bird_order
Upupiformes
broken_eggs
Missing: Not collected
brood_size
Missing: Not collected
clutch_size
8
code_id_statistica
19
coll_date_juliane_days
124
collection date
5/5/07 0:00
collection_timestamp
5/5/07
comments_in_spanish
Depredado
common name
organismal metagenome
country
GAZ:Spain
country_nation
Spain
country_region
Hoya de Guadix
culturing_date
5/6/07
depth
0
dna_extracted
TRUE
elevation
1160
empo_0
EMP sample
empo_1
Host-associated
empo_2
Animal
empo_3
Animal surface
enterobacteriaceae_density
10381796.55
enterococcus_density
2966227.585
env biome
mediterranean shrubland biome
env feature
nest of bird
env matter
egg
env package
host-associated
eppendorf_name
52.1
estefania_plates
2C12
extracted DNA avail now
TRUE
feathers
FALSE
fledge_success_brood
Missing: Not collected
fledge_success_clutch
Missing: Not collected
fledging_date
Missing: Not collected
geo loc name
Spain:Hoya de Guadix
hatching_date
Missing: Not collected
hatching_success
Missing: Not collected
hatching_synchrony
asyn
host common name
Eurasian hoopoe
host scientific name
Upupiformes
host subject id
Abubilla.52.1
host taxid
57439
latitude
37.32654722
lay_date_juliane_days
116
laying_date
7/26/07
log_enterobacteriaceae_density
7.016272556
log_enterococcus_density
6.472204616
log_mesophiles_density
7.229166446
log_rel_growth_enterobact
-0.266950171
log_rel_growth_enterococcus
-1.007822502
log_rel_growth_mesophiles
-0.522878685
log_rel_growth_staphylococcus
2.726932899
log_staphylococcus_density
1.515622328
longitude
-3.059219444
mesophiles_density
16949871.92
nest_type
hole
number_fledging
Missing: Not provided
number_sampled_eggs
8
observer
Juanma
physical_location_1
U Granada
physical_specimen_location
CCME
physical_specimen_remaining
TRUE
plants
FALSE
platero_plates
P2F08
predated
egg phase
public
TRUE
rel_growth_enterobacteriaceae
-0.459183629
rel_growth_enterococcus
-0.901785073
rel_growth_staphylococcus
532.2524989
relative_growth_mesophiles
-0.699999959
required_sample_info_status
completed
sample name
qiita_sid_1632:1632.E2C12.r.EMPbird.v4.NoIndex.L001
sample type
bird egg shell
sample_nest
Abubilla.52.1
sample_progress
sequenced (16S)
sampling time
1
sampling_code_id
216
species name
Upupa epops
staphylococcus_density
31.78100984
storing_days
1
unhatched_eggs
Missing: Not provided
year
2007