Bird Egg Shells from Spain; 1632.E5F03.Knight16sV4.JuannaBirdEMP.NoIndex.L005.R1.001.sequences
bird metagenome
Bird Egg Shells from nest Golondrinacomun.Gol5.2
ENA first public
2016-07-13
ENA last update
2016-07-13
External Id
SAMEA4076531
INSDC center alias
UCSDMI
INSDC center name
University of California San Diego Microbiome Initiative
INSDC first public
2016-07-13T17:01:27Z
INSDC last update
2016-07-13T01:15:12Z
INSDC status
public
Submitter Id
qiita_sid_1632:1632.E5F03.Knight16sV4.JuannaBirdEMP.NoIndex.L005.R1.001.sequences
abandoned
No
altitude
0
anonymized name
E5F03
arcsine_fledge_success_brood
0.100167421
arcsine_fledge_success_clutch
0.100167421
arcsine_hatching_success
1.570796327
area
Cortijo Becerra
assigned_from_geo
TRUE
backup
TRUE
bird_family
Hirundinidae
bird_order
Passeriformes
broken_eggs
0
brood_size
5
clutch_size
5
code_id_statistica
302
coll_date_juliane_days
144
collection date
5/25/07 0:00
collection_timestamp
5/25/07
common name
organismal metagenome
country
GAZ:Spain
country_nation
Spain
country_region
Hoya de Guadix
culturing_date
5/28/07
depth
0
dna_extracted
TRUE
elevation
992
empo_0
EMP sample
empo_1
Host-associated
empo_2
Animal
empo_3
Animal surface
enterobacteriaceae_density
3.328877423
enterococcus_density
1
env biome
mediterranean shrubland biome
env feature
nest of bird
env matter
egg
env package
host-associated
eppendorf_name
GOL 5.2
estefania_plates
5F03
extracted DNA avail now
TRUE
feathers
TRUE
fledge_success_brood
1
fledge_success_clutch
1
fledging_date
6/15/07
geo loc name
Spain:Hoya de Guadix
hatching_date
5/29/07
hatching_success
1
hatching_synchrony
syn
host common name
Barn swallow
host scientific name
Passeriformes
host subject id
Golondrinacomun.Gol5.2
host taxid
43150
latitude
37.43306389
lay_date_juliane_days
128
laying_date
8/7/07
log_enterobacteriaceae_density
0.636375288
log_enterococcus_density
0.301029996
log_mesophiles_density
2.385424701
log_rel_growth_enterobact
-5.75270215
log_rel_growth_enterococcus
-0.965592213
log_rel_growth_mesophiles
-4.437903164
log_rel_growth_staphylococcus
2.031505725
log_staphylococcus_density
2.031505725
longitude
-3.103047222
mesophiles_density
241.8984261
nest_type
hole
number_fledging
5
number_sampled_eggs
5
observer
Juanma
physical_specimen_location
CCME
physical_specimen_remaining
TRUE
plants
FALSE
platero_plates
P4G05
predated
No
public
TRUE
rel_growth_enterobacteriaceae
-0.999998233
rel_growth_enterococcus
-0.891755014
rel_growth_staphylococcus
106.5240775
relative_growth_mesophiles
-0.999963516
required_sample_info_status
completed
sample name
qiita_sid_1632:1632.E5F03.Knight16sV4.JuannaBirdEMP.NoIndex.L005.R1.001.sequences
sample type
bird egg shell
sample_nest
Golondrinacomun.Gol5.2
sample_progress
sequenced (16S)
sampling time
2
sampling_code_id
446
species name
Hirundo rustica
staphylococcus_density
106.5240775
storing_days
3
unhatched_eggs
0
year
2007