1632.E3D12.Knight16sV4.JuannaBirdEMP.NoIndex.L005.R1.001.sequences; Bird Egg Shells from Spain
bird metagenome
Bird Egg Shells from nest Grajilla.Gra4.1
ENA first public
2016-07-13
ENA last update
2016-07-13
External Id
SAMEA4076298
INSDC center alias
UCSDMI
INSDC center name
University of California San Diego Microbiome Initiative
INSDC first public
2016-07-13T17:01:27Z
INSDC last update
2016-07-13T01:15:04Z
INSDC status
public
Submitter Id
qiita_sid_1632:1632.E3D12.Knight16sV4.JuannaBirdEMP.NoIndex.L005.R1.001.sequences
abandoned
No
altitude
0
anonymized name
E3D12
arcsine_fledge_success_brood
0.100167421
arcsine_fledge_success_clutch
0.100167421
arcsine_hatching_success
1.570796327
area
Hueneja
assigned_from_geo
TRUE
backup
FALSE
bird_family
Corvidae
bird_order
Passeriformes
broken_eggs
0
brood_size
6
clutch_size
6
code_id_statistica
358
coll_date_juliane_days
131
collection date
5/12/07 0:00
collection_timestamp
5/12/07
common name
organismal metagenome
country
GAZ:Spain
country_nation
Spain
country_region
Hoya de Guadix
culturing_date
5/14/07
depth
0
dna_extracted
TRUE
elevation
1228
empo_0
EMP sample
empo_1
Host-associated
empo_2
Animal
empo_3
Animal surface
enterobacteriaceae_density
572008.9816
enterococcus_density
20.80032661
env biome
mediterranean shrubland biome
env feature
nest of bird
env matter
egg
env package
host-associated
eppendorf_name
GRA 4.1
estefania_plates
3D12
extracted DNA avail now
TRUE
feathers
TRUE
fledge_success_brood
1
fledge_success_clutch
1
fledging_date
6/7/07
geo loc name
Spain:Hoya de Guadix
hatching_date
5/22/07
hatching_success
1
hatching_synchrony
asyn
host common name
Jackdaw
host scientific name
Passeriformes
host subject id
Grajilla.Gra4.1
host taxid
30423
latitude
37.17932778
lay_date_juliane_days
116
laying_date
7/26/07
log_enterobacteriaceae_density
5.757403607
log_enterococcus_density
1.338463
log_mesophiles_density
6.372228371
log_rel_growth_enterobact
Missing: Not provided
log_rel_growth_enterococcus
Missing: Not provided
log_rel_growth_mesophiles
Missing: Not provided
log_rel_growth_staphylococcus
Missing: Not provided
log_staphylococcus_density
0.195556211
longitude
-2.957352778
mesophiles_density
2356286.998
nest_type
hole
number_fledging
6
number_sampled_eggs
6
observer
Juan
physical_location_1
U Granada
physical_specimen_location
CCME
physical_specimen_remaining
TRUE
plants
TRUE
platero_plates
P3D011
predated
No
public
TRUE
required_sample_info_status
completed
sample name
qiita_sid_1632:1632.E3D12.Knight16sV4.JuannaBirdEMP.NoIndex.L005.R1.001.sequences
sample type
bird egg shell
sample_nest
Grajilla.Gra4.1
sample_progress
sequenced (16S)
sampling time
1
sampling_code_id
317
species name
Corvus monedula
staphylococcus_density
0.568758931
storing_days
2
unhatched_eggs
0
year
2007