Bird Egg Shells from Spain; 1632.E5G08.Knight16sV4.JuannaBirdEMP.NoIndex.L005.R1.001.sequences
bird metagenome
Bird Egg Shells from nest Autillo.Tri22.1
ENA first public
2016-07-13
ENA last update
2016-07-13
External Id
SAMEA4076548
INSDC center alias
UCSDMI
INSDC center name
University of California San Diego Microbiome Initiative
INSDC first public
2016-07-13T17:01:27Z
INSDC last update
2016-07-13T01:15:12Z
INSDC status
public
Submitter Id
qiita_sid_1632:1632.E5G08.Knight16sV4.JuannaBirdEMP.NoIndex.L005.R1.001.sequences
abandoned
egg phase
altitude
0
anonymized name
E5G08
arcsine_fledge_success_brood
Missing: Not collected
arcsine_fledge_success_clutch
Missing: Not collected
arcsine_hatching_success
Missing: Not collected
area
Trinidad
assigned_from_geo
TRUE
backup
TRUE
bird_family
Strigidae
bird_order
Strigiformes
broken_eggs
Missing: Not collected
brood_size
Missing: Not collected
clutch_size
4
code_id_statistica
97
coll_date_juliane_days
154
collection date
6/4/07 0:00
collection_timestamp
6/4/07
comments_in_spanish
Abandonado
common name
organismal metagenome
country
GAZ:Spain
country_nation
Spain
country_region
Hoya de Guadix
culturing_date
6/20/07
depth
0
dna_extracted
TRUE
elevation
1260
empo_0
EMP sample
empo_1
Host-associated
empo_2
Animal
empo_3
Animal surface
enterobacteriaceae_density
693070.1409
enterococcus_density
114332.9994
env biome
mediterranean shrubland biome
env feature
nest of bird
env matter
egg
env package
host-associated
eppendorf_name
A3 tri 22
estefania_plates
5G08
extracted DNA avail now
TRUE
feathers
FALSE
fledge_success_brood
Missing: Not collected
fledge_success_clutch
Missing: Not collected
fledging_date
Missing: Not collected
geo loc name
Spain:Hoya de Guadix
hatching_date
Missing: Not collected
hatching_success
Missing: Not collected
hatching_synchrony
asyn
host common name
Eurasian scops-owl
host scientific name
Strigiformes
host subject id
Autillo.Tri22.1
host taxid
126827
latitude
37.28771389
lay_date_juliane_days
Missing: Not provided
laying_date
Missing: Not provided
log_enterobacteriaceae_density
5.840777815
log_enterococcus_density
5.058175395
log_mesophiles_density
7.0713999
log_rel_growth_enterobact
-3.549666669
log_rel_growth_enterococcus
-1.333399292
log_rel_growth_mesophiles
1.531478881
log_rel_growth_staphylococcus
0
log_staphylococcus_density
0
longitude
-3.002538889
mesophiles_density
11786907.16
nest_type
hole
number_fledging
Missing: Not provided
number_sampled_eggs
4
observer
Juan
physical_specimen_location
CCME
physical_specimen_remaining
TRUE
plants
FALSE
platero_plates
P5B012
predated
No
public
TRUE
rel_growth_enterobacteriaceae
-0.999717945
rel_growth_enterococcus
-0.953591161
rel_growth_staphylococcus
0
relative_growth_mesophiles
32.9999972
required_sample_info_status
completed
sample name
qiita_sid_1632:1632.E5G08.Knight16sV4.JuannaBirdEMP.NoIndex.L005.R1.001.sequences
sample type
bird egg shell
sample_nest
Autillo.Tri22.1
sample_progress
sequenced (16S)
sampling time
1
sampling_code_id
537
species name
Otus scops
staphylococcus_density
0
storing_days
16
unhatched_eggs
Missing: Not provided
year
2007