1632.E5A05.Knight16sV4.JuannaBirdEMP.NoIndex.L005.R1.001.sequences; Bird Egg Shells from Spain
bird metagenome
Bird Egg Shells from nest Golondrinacomun.Gol1.1
ENA first public
2016-07-13
ENA last update
2016-07-13
External Id
SAMEA4076466
INSDC center alias
UCSDMI
INSDC center name
University of California San Diego Microbiome Initiative
INSDC first public
2016-07-13T17:01:27Z
INSDC last update
2016-07-13T01:15:10Z
INSDC status
public
Submitter Id
qiita_sid_1632:1632.E5A05.Knight16sV4.JuannaBirdEMP.NoIndex.L005.R1.001.sequences
abandoned
No
altitude
0
anonymized name
E5A05
arcsine_fledge_success_brood
0.100167421
arcsine_fledge_success_clutch
0.091414358
arcsine_hatching_success
1.107148718
area
Cortijo Becerra
assigned_from_geo
TRUE
backup
TRUE
bird_family
Hirundinidae
bird_order
Passeriformes
broken_eggs
0
brood_size
4
clutch_size
5
code_id_statistica
294
coll_date_juliane_days
134
collection date
5/15/07 0:00
collection_timestamp
5/15/07
common name
organismal metagenome
country
GAZ:Spain
country_nation
Spain
country_region
Hoya de Guadix
culturing_date
5/28/07
depth
0
dna_extracted
TRUE
elevation
992
empo_0
EMP sample
empo_1
Host-associated
empo_2
Animal
empo_3
Animal surface
enterobacteriaceae_density
9847.539886
enterococcus_density
0
env biome
mediterranean shrubland biome
env feature
nest of bird
env matter
egg
env package
host-associated
eppendorf_name
H?L 1.2?
estefania_plates
5A05
extracted DNA avail now
TRUE
feathers
TRUE
fledge_success_brood
1
fledge_success_clutch
0.833333333
fledging_date
6/15/07
geo loc name
Spain:Hoya de Guadix
hatching_date
5/28/07
hatching_success
0.8
hatching_synchrony
syn
host common name
Barn swallow
host scientific name
Passeriformes
host subject id
Golondrinacomun.Gol1.1
host taxid
43150
latitude
37.43306389
lay_date_juliane_days
126
laying_date
8/5/07
log_enterobacteriaceae_density
3.993371848
log_enterococcus_density
0
log_mesophiles_density
5.474054585
log_rel_growth_enterobact
Missing: Not provided
log_rel_growth_enterococcus
Missing: Not provided
log_rel_growth_mesophiles
Missing: Not provided
log_rel_growth_staphylococcus
Missing: Not provided
log_staphylococcus_density
2.609819523
longitude
-3.103047222
mesophiles_density
297888.0816
nest_type
hole
number_fledging
5
number_sampled_eggs
5
observer
Juanma
physical_specimen_location
CCME
physical_specimen_remaining
TRUE
plants
FALSE
platero_plates
P4H04
predated
No
public
TRUE
required_sample_info_status
completed
sample name
qiita_sid_1632:1632.E5A05.Knight16sV4.JuannaBirdEMP.NoIndex.L005.R1.001.sequences
sample type
bird egg shell
sample_nest
Golondrinacomun.Gol1.1
sample_progress
sequenced (16S)
sampling time
1
sampling_code_id
449
species name
Hirundo rustica
staphylococcus_density
406.2110203
storing_days
13
unhatched_eggs
1
year
2007