1632.E2H06.Knight16sV4.JuannaBirdEMP.NoIndex.L005.R1.001.sequences; Bird Egg Shells from Spain
bird metagenome
Bird Egg Shells from nest Chova.Cho7.2
ENA first public
2016-07-13
ENA last update
2016-07-13
External Id
SAMEA4076232
INSDC center alias
UCSDMI
INSDC center name
University of California San Diego Microbiome Initiative
INSDC first public
2016-07-13T17:01:27Z
INSDC last update
2016-07-13T01:15:02Z
INSDC status
public
Submitter Id
qiita_sid_1632:1632.E2H06.Knight16sV4.JuannaBirdEMP.NoIndex.L005.R1.001.sequences
altitude
0
anonymized name
E2H06
arcsine_fledge_success_brood
Missing: Not collected
arcsine_fledge_success_clutch
Missing: Not collected
arcsine_hatching_success
1.047197551
area
Cortijo Perro
assigned_from_geo
TRUE
backup
FALSE
bird_family
Corvidae
bird_order
Passeriformes
broken_eggs
0
brood_size
3
clutch_size
4
code_id_statistica
176
coll_date_juliane_days
117
collection date
4/28/07 0:00
collection_timestamp
4/28/07
comments_in_spanish
Sin datos de los pollos
common name
organismal metagenome
country
GAZ:Spain
country_nation
Spain
country_region
Hoya de Guadix
culturing_date
5/1/07
depth
0
dna_extracted
TRUE
elevation
1160
empo_0
EMP sample
empo_1
Host-associated
empo_2
Animal
empo_3
Animal surface
enterobacteriaceae_density
4586465.959
enterococcus_density
81.18821203
env biome
mediterranean shrubland biome
env feature
nest of bird
env matter
egg
env package
host-associated
eppendorf_name
CHO 7.3
estefania_plates
2H06
extracted DNA avail now
TRUE
feathers
FALSE
fledge_success_brood
Missing: Not collected
fledge_success_clutch
Missing: Not collected
fledging_date
Missing: Not collected
geo loc name
Spain:Hoya de Guadix
hatching_date
5/5/07
hatching_success
0.75
hatching_synchrony
asyn
host common name
Red-billed chough
host scientific name
Passeriformes
host subject id
Chova.Cho7.2
host taxid
56790
latitude
37.32654722
lay_date_juliane_days
101
laying_date
7/11/07
log_enterobacteriaceae_density
6.661478269
log_enterococcus_density
1.914809533
log_mesophiles_density
6.276127523
log_rel_growth_enterobact
6.624079382
log_rel_growth_enterococcus
1.914809533
log_rel_growth_mesophiles
1.021187114
log_rel_growth_staphylococcus
0
log_staphylococcus_density
0
longitude
-3.059219444
mesophiles_density
1888544.807
nest_type
hole
number_fledging
Missing: Not provided
number_sampled_eggs
4
observer
Juanma
physical_location_1
U Granada
physical_specimen_location
CCME
physical_specimen_remaining
TRUE
plants
TRUE
platero_plates
P2C01
public
TRUE
rel_growth_enterobacteriaceae
4208034.371
rel_growth_enterococcus
81.18821203
rel_growth_staphylococcus
0
relative_growth_mesophiles
9.499947182
required_sample_info_status
completed
sample name
qiita_sid_1632:1632.E2H06.Knight16sV4.JuannaBirdEMP.NoIndex.L005.R1.001.sequences
sample type
bird egg shell
sample_nest
Chova.Cho7.2
sample_progress
sequenced (16S)
sampling time
2
sampling_code_id
139
species name
Pyrrhocorax phyrrhocorax
staphylococcus_density
0
storing_days
3
unhatched_eggs
1
year
2007