1632.E1F01.r.EMPbird.v4.NoIndex.L001; Bird Egg Shells from Spain
bird metagenome
Bird Egg Shells from nest Abubilla.123.2
ENA first public
2016-07-13
ENA last update
2016-07-13
External Id
SAMEA4076096
INSDC center alias
UCSDMI
INSDC center name
University of California San Diego Microbiome Initiative
INSDC first public
2016-07-13T17:01:27Z
INSDC last update
2016-07-13T01:14:58Z
INSDC status
public
Submitter Id
qiita_sid_1632:1632.E1F01.r.EMPbird.v4.NoIndex.L001
abandoned
No
altitude
0
anonymized name
E1F01
arcsine_fledge_success_brood
Missing: Not collected
arcsine_fledge_success_clutch
Missing: Not collected
arcsine_hatching_success
Missing: Not collected
area
Fuentealamo
assigned_from_geo
TRUE
backup
FALSE
bird_family
Upuidae
bird_order
Upupiformes
broken_eggs
0
brood_size
7
clutch_size
8
code_id_statistica
5
coll_date_juliane_days
90
collection date
4/3/07 0:00
collection_timestamp
4/3/07
comments_in_spanish
Depredado
common name
organismal metagenome
country
GAZ:Spain
country_nation
Spain
country_region
Hoya de Guadix
culturing_date
4/3/07
depth
0
dna_extracted
TRUE
elevation
1145
empo_0
EMP sample
empo_1
Host-associated
empo_2
Animal
empo_3
Animal surface
enterobacteriaceae_density
62.69073219
enterococcus_density
215.6476156
env biome
mediterranean shrubland biome
env feature
nest of bird
env matter
egg
env package
host-associated
eppendorf_name
123.1
estefania_plates
1F01
extracted DNA avail now
TRUE
feathers
FALSE
fledge_success_brood
Missing: Not collected
fledge_success_clutch
Missing: Not collected
fledging_date
Missing: Not collected
geo loc name
Spain:Hoya de Guadix
hatching_date
4/8/07
hatching_success
Missing: Not collected
hatching_synchrony
asyn
host common name
Eurasian hoopoe
host scientific name
Upupiformes
host subject id
Abubilla.123.2
host taxid
57439
latitude
37.34600556
lay_date_juliane_days
72
laying_date
6/12/07
log_enterobacteriaceae_density
1.804076242
log_enterococcus_density
2.335753914
log_mesophiles_density
1.839742567
log_rel_growth_enterobact
Missing: Not provided
log_rel_growth_enterococcus
Missing: Not provided
log_rel_growth_mesophiles
Missing: Not provided
log_rel_growth_staphylococcus
Missing: Not provided
log_staphylococcus_density
0
longitude
-3.061197222
mesophiles_density
68.1421002
nest_type
hole
number_fledging
Missing: Not provided
number_sampled_eggs
8
observer
Juanma
physical_location_1
U Granada
physical_specimen_location
CCME
physical_specimen_remaining
TRUE
plants
FALSE
platero_plates
P1A06
predated
brood phase
public
TRUE
required_sample_info_status
completed
sample name
qiita_sid_1632:1632.E1F01.r.EMPbird.v4.NoIndex.L001
sample type
bird egg shell
sample_nest
Abubilla.123.2
sample_progress
sequenced (16S)
sampling time
2
sampling_code_id
5
species name
Upupa epops
staphylococcus_density
0
storing_days
0
unhatched_eggs
1
year
2007