Bird Egg Shells from Spain; 1632.E2G12.Knight16sV4.JuannaBirdEMP.NoIndex.L005.R1.001.sequences
bird metagenome
Bird Egg Shells from nest Abubilla.820.2
ENA first public
2016-07-13
ENA last update
2016-07-13
External Id
SAMEA4076224
INSDC center alias
UCSDMI
INSDC center name
University of California San Diego Microbiome Initiative
INSDC first public
2016-07-13T17:01:27Z
INSDC last update
2016-07-13T01:15:02Z
INSDC status
public
Submitter Id
qiita_sid_1632:1632.E2G12.Knight16sV4.JuannaBirdEMP.NoIndex.L005.R1.001.sequences
abandoned
No
altitude
0
anonymized name
E2G12
arcsine_fledge_success_brood
0.061275582
arcsine_fledge_success_clutch
0.05776715
arcsine_hatching_success
Missing: Not collected
area
Torre Guajar
assigned_from_geo
TRUE
backup
FALSE
bird_family
Upuidae
bird_order
Upupiformes
broken_eggs
0
brood_size
8
clutch_size
9
code_id_statistica
47
coll_date_juliane_days
119
collection date
4/30/07 0:00
collection_timestamp
4/30/07
common name
organismal metagenome
country
GAZ:Spain
country_nation
Spain
country_region
Hoya de Guadix
culturing_date
5/5/07
depth
0
dna_extracted
TRUE
elevation
1039
empo_0
EMP sample
empo_1
Host-associated
empo_2
Animal
empo_3
Animal surface
enterobacteriaceae_density
3802730.675
enterococcus_density
20.01365338
env biome
mediterranean shrubland biome
env feature
nest of bird
env matter
egg
env package
host-associated
eppendorf_name
820
estefania_plates
2G12
extracted DNA avail now
TRUE
feathers
FALSE
fledge_success_brood
0.375
fledge_success_clutch
0.333333333
fledging_date
5/28/07
geo loc name
Spain:Hoya de Guadix
hatching_date
5/7/07
hatching_success
Missing: Not collected
hatching_synchrony
asyn
host common name
Eurasian hoopoe
host scientific name
Upupiformes
host subject id
Abubilla.820.2
host taxid
57439
latitude
37.38953889
lay_date_juliane_days
100
laying_date
7/10/07
log_enterobacteriaceae_density
6.580095682
log_enterococcus_density
1.322501564
log_mesophiles_density
7.007419397
log_rel_growth_enterobact
Missing: Not provided
log_rel_growth_enterococcus
Missing: Not provided
log_rel_growth_mesophiles
Missing: Not provided
log_rel_growth_staphylococcus
Missing: Not provided
log_staphylococcus_density
1.470123416
longitude
-3.098552778
mesophiles_density
10172304.56
nest_type
hole
number_fledging
3
number_sampled_eggs
9
observer
Manolo
physical_location_1
U Granada
physical_specimen_location
CCME
physical_specimen_remaining
TRUE
plants
FALSE
platero_plates
P2F012
predated
No
public
TRUE
required_sample_info_status
completed
sample name
qiita_sid_1632:1632.E2G12.Knight16sV4.JuannaBirdEMP.NoIndex.L005.R1.001.sequences
sample type
bird egg shell
sample_nest
Abubilla.820.2
sample_progress
sequenced (16S)
sampling time
2
sampling_code_id
203
species name
Upupa epops
staphylococcus_density
28.52048006
storing_days
5
unhatched_eggs
1
year
2007