Bird Egg Shells from Spain; 1632.E3D10.r.EMPbird.v4.NoIndex.L001
bird metagenome
Bird Egg Shells from nest Urraca.UCON2.1
ENA first public
2016-07-13
ENA last update
2016-07-13
External Id
SAMEA4076296
INSDC center alias
UCSDMI
INSDC center name
University of California San Diego Microbiome Initiative
INSDC first public
2016-07-13T17:01:27Z
INSDC last update
2016-07-13T01:15:04Z
INSDC status
public
Submitter Id
qiita_sid_1632:1632.E3D10.r.EMPbird.v4.NoIndex.L001
abandoned
No
altitude
0
anonymized name
E3D10
arcsine_fledge_success_brood
Missing: Not collected
arcsine_fledge_success_clutch
Missing: Not collected
arcsine_hatching_success
Missing: Not collected
area
Cortijo Conejo
assigned_from_geo
TRUE
backup
FALSE
bird_family
Corvidae
bird_order
Passeriformes
broken_eggs
Missing: Not collected
brood_size
Missing: Not collected
clutch_size
6
code_id_statistica
555
coll_date_juliane_days
125
collection date
5/6/07 0:00
collection_timestamp
5/6/07
comments_in_spanish
Parasitado
common name
organismal metagenome
country
GAZ:Spain
country_nation
Spain
country_region
Hoya de Guadix
culturing_date
5/12/07
depth
0
dna_extracted
TRUE
elevation
1055
empo_0
EMP sample
empo_1
Host-associated
empo_2
Animal
empo_3
Animal surface
enterobacteriaceae_density
459262.8273
enterococcus_density
24921.23869
env biome
mediterranean shrubland biome
env feature
nest of bird
env matter
egg
env package
host-associated
eppendorf_name
UCON 2.1
estefania_plates
3D10
extracted DNA avail now
TRUE
feathers
FALSE
fledge_success_brood
Missing: Not collected
fledge_success_clutch
Missing: Not collected
fledging_date
Missing: Not collected
geo loc name
Spain:Hoya de Guadix
hatching_date
Missing: Not collected
hatching_success
Missing: Not collected
hatching_synchrony
asyn
host common name
Black-billed Magpie
host scientific name
Passeriformes
host subject id
Urraca.UCON2.1
host taxid
34924
latitude
37.40583611
lay_date_juliane_days
118
laying_date
7/28/07
log_enterobacteriaceae_density
5.662062241
log_enterococcus_density
4.396587051
log_mesophiles_density
6.852501641
log_rel_growth_enterobact
-0.730374331
log_rel_growth_enterococcus
-0.623120357
log_rel_growth_mesophiles
-0.334888192
log_rel_growth_staphylococcus
0
log_staphylococcus_density
0
longitude
-3.082122222
mesophiles_density
7120353.911
nest_type
open
number_fledging
Missing: Not provided
number_sampled_eggs
6
observer
Juanma
physical_location_1
U Granada
physical_specimen_location
CCME
physical_specimen_remaining
TRUE
plants
TRUE
platero_plates
P3C07
predated
parasited
public
TRUE
rel_growth_enterobacteriaceae
-0.813951716
rel_growth_enterococcus
-0.761834066
rel_growth_staphylococcus
0
relative_growth_mesophiles
-0.537499925
required_sample_info_status
completed
sample name
qiita_sid_1632:1632.E3D10.r.EMPbird.v4.NoIndex.L001
sample type
bird egg shell
sample_nest
Urraca.UCON2.1
sample_progress
sequenced (16S)
sampling time
1
sampling_code_id
300
species name
Pica pica
staphylococcus_density
0
storing_days
6
unhatched_eggs
Missing: Not provided
year
2007