root metagenome
sequences of fungal endophytes from Assembly history experiment
collection_date
2012-05-24
env_biome
greenhouse pot experiment
env_feature
Temp (26.6666) and Light (12/12) held constant in greenhouse from November to May in Austin, Texas
env_material
root tissue after experimental manipulation od Assembly
geo_loc_name
USA:Texas, UT Austin Greenhouse on Welch Hall
host
A.gyrans
lat_lon
30.287 N 97.738 W
Assembly Treatment: 1st Fungi
Disturbed
Assembly Treatment: First Plant
M.repens
barcode
ACAGCTCGTGT
sequencing primer
NL1 - GGTCCGTGTTTCAAGACGG
fertilizer_regm
none
fungicide_regm
none
growth_med
field soil( Satellite soils from Archbold Biological Reserve pastures) /sterile blast sand 1:9
herbicide_regm
none
host_age
6 months
plant_body_site
root
samp_collect_device
sterilized sieve and forceps
samp_mat_process
placed in sterilized tubes, DNA extraction
samp_size
~10% of root volume, relative to plant material
samp_store_dur
<2 months
samp_store_loc
Ultracold Freezer
samp_store_temp
neg 80C
samp_vol_we_dna_ext
0.25g
watering_regm
6mm every 3 days
BioSampleModel
MIMARKS.survey
BioSampleModel
MIGS/MIMS/MIMARKS.plant-associated