1632.E5H04.Knight16sV4.JuannaBirdEMP.NoIndex.L005.R1.001.sequences; Bird Egg Shells from Spain
bird metagenome
Bird Egg Shells from nest Golondrinacomun.Gol2.2
ENA first public
2016-07-13
ENA last update
2016-07-13
External Id
SAMEA4076556
INSDC center alias
UCSDMI
INSDC center name
University of California San Diego Microbiome Initiative
INSDC first public
2016-07-13T17:01:26Z
INSDC last update
2016-07-13T01:15:13Z
INSDC status
public
Submitter Id
qiita_sid_1632:1632.E5H04.Knight16sV4.JuannaBirdEMP.NoIndex.L005.R1.001.sequences
abandoned
No
altitude
0
anonymized name
E5H04
arcsine_fledge_success_brood
0.100167421
arcsine_fledge_success_clutch
0.100167421
arcsine_hatching_success
1.570796327
area
Cortijo Becerra
assigned_from_geo
TRUE
backup
TRUE
bird_family
Hirundinidae
bird_order
Passeriformes
broken_eggs
0
brood_size
5
clutch_size
5
code_id_statistica
296
coll_date_juliane_days
144
collection date
5/25/07 0:00
collection_timestamp
5/25/07
common name
organismal metagenome
country
GAZ:Spain
country_nation
Spain
country_region
Hoya de Guadix
culturing_date
5/28/07
depth
0
dna_extracted
TRUE
elevation
992
empo_0
EMP sample
empo_1
Host-associated
empo_2
Animal
empo_3
Animal surface
enterobacteriaceae_density
0.32315892
enterococcus_density
1
env biome
mediterranean shrubland biome
env feature
nest of bird
env matter
egg
env package
host-associated
eppendorf_name
GOL 2.2
estefania_plates
5H04
extracted DNA avail now
TRUE
feathers
TRUE
fledge_success_brood
1
fledge_success_clutch
1
fledging_date
6/15/07
geo loc name
Spain:Hoya de Guadix
hatching_date
5/29/07
hatching_success
1
hatching_synchrony
syn
host common name
Barn swallow
host scientific name
Passeriformes
host subject id
Golondrinacomun.Gol2.2
host taxid
43150
latitude
37.43306389
lay_date_juliane_days
129
laying_date
8/8/07
log_enterobacteriaceae_density
0.121612009
log_enterococcus_density
0.301029996
log_mesophiles_density
5.1114795
log_rel_growth_enterobact
-7.961978199
log_rel_growth_enterococcus
-0.466049976
log_rel_growth_mesophiles
-2.972110706
log_rel_growth_staphylococcus
0.444610058
log_staphylococcus_density
0.59200237
longitude
-3.103047222
mesophiles_density
129263.5682
nest_type
hole
number_fledging
5
number_sampled_eggs
4
observer
Juanma
physical_specimen_location
CCME
physical_specimen_remaining
TRUE
plants
FALSE
platero_plates
P4H03
predated
No
public
TRUE
rel_growth_enterobacteriaceae
-0.999999989
rel_growth_enterococcus
-0.658059908
rel_growth_staphylococcus
1.783620706
relative_growth_mesophiles
-0.998933676
required_sample_info_status
completed
sample name
qiita_sid_1632:1632.E5H04.Knight16sV4.JuannaBirdEMP.NoIndex.L005.R1.001.sequences
sample type
bird egg shell
sample_nest
Golondrinacomun.Gol2.2
sample_progress
sequenced (16S)
sampling time
2
sampling_code_id
448
species name
Hirundo rustica
staphylococcus_density
2.908430284
storing_days
3
unhatched_eggs
0
year
2007