Bird Egg Shells from Spain; 1632.E4F05.Knight16sV4.JuannaBirdEMP.NoIndex.L005.R1.001.sequences
bird metagenome
Bird Egg Shells from nest Gorrionmolinero.G26.2.2
ENA first public
2016-07-13
ENA last update
2016-07-13
External Id
SAMEA4076429
INSDC center alias
UCSDMI
INSDC center name
University of California San Diego Microbiome Initiative
INSDC first public
2016-07-13T17:01:27Z
INSDC last update
2016-07-13T01:15:08Z
INSDC status
public
Submitter Id
qiita_sid_1632:1632.E4F05.Knight16sV4.JuannaBirdEMP.NoIndex.L005.R1.001.sequences
abandoned
No
altitude
0
anonymized name
E4F05
arcsine_fledge_success_brood
0.100167421
arcsine_fledge_success_clutch
0.091414358
arcsine_hatching_success
1.570796327
area
Hernan-Valle
assigned_from_geo
TRUE
backup
FALSE
bird_family
Passeridae
bird_order
Passeriformes
broken_eggs
1
brood_size
5
clutch_size
6
code_id_statistica
346
coll_date_juliane_days
139
collection date
5/20/07 0:00
collection_timestamp
5/20/07
common name
organismal metagenome
country
GAZ:Spain
country_nation
Spain
country_region
Hoya de Guadix
culturing_date
5/29/07
depth
0
dna_extracted
TRUE
elevation
1134
empo_0
EMP sample
empo_1
Host-associated
empo_2
Animal
empo_3
Animal surface
enterobacteriaceae_density
982397.1823
enterococcus_density
32.48708918
env biome
mediterranean shrubland biome
env feature
nest of bird
env matter
egg
env package
host-associated
eppendorf_name
G 26.2.2
estefania_plates
4F05
extracted DNA avail now
TRUE
feathers
TRUE
fledge_success_brood
1
fledge_success_clutch
0.833333333
fledging_date
6/3/07
geo loc name
Spain:Hoya de Guadix
hatching_date
5/23/07
hatching_success
1
hatching_synchrony
syn
host common name
Eurasian tree sparrow
host scientific name
Passeriformes
host subject id
Gorrionmolinero.G26.2.2
host taxid
9160
latitude
37.37229722
lay_date_juliane_days
123
laying_date
8/2/07
log_enterobacteriaceae_density
5.99228755
log_enterococcus_density
1.524877399
log_mesophiles_density
6.590278849
log_rel_growth_enterobact
-1.001010765
log_rel_growth_enterococcus
-2.157262013
log_rel_growth_mesophiles
-0.561942687
log_rel_growth_staphylococcus
-0.780888381
log_staphylococcus_density
0
longitude
-3.066655556
mesophiles_density
3892949.207
nest_type
hole
number_fledging
5
number_sampled_eggs
5
observer
Juanma
physical_specimen_location
CCME
physical_specimen_remaining
TRUE
plants
TRUE
platero_plates
P3H06
predated
No
public
TRUE
rel_growth_enterobacteriaceae
-0.900232467
rel_growth_enterococcus
-0.993037936
rel_growth_staphylococcus
-0.834380443
relative_growth_mesophiles
-0.7258064
required_sample_info_status
completed
sample name
qiita_sid_1632:1632.E4F05.Knight16sV4.JuannaBirdEMP.NoIndex.L005.R1.001.sequences
sample type
bird egg shell
sample_nest
Gorrionmolinero.G26.2.2
sample_progress
sequenced (16S)
sampling time
2
sampling_code_id
424
species name
Passer montanus
staphylococcus_density
0
storing_days
9
unhatched_eggs
0
year
2007