Bird Egg Shells from Spain; 1632.E3H04.Knight16sV4.JuannaBirdEMP.NoIndex.L005.R1.001.sequences
bird metagenome
Bird Egg Shells from nest Collalbanegra.ColTri.2
ENA first public
2016-07-13
ENA last update
2016-07-13
External Id
SAMEA4076347
INSDC center alias
UCSDMI
INSDC center name
University of California San Diego Microbiome Initiative
INSDC first public
2016-07-13T17:01:27Z
INSDC last update
2016-07-13T01:15:06Z
INSDC status
public
Submitter Id
qiita_sid_1632:1632.E3H04.Knight16sV4.JuannaBirdEMP.NoIndex.L005.R1.001.sequences
altitude
0
anonymized name
E3H04
arcsine_fledge_success_brood
Missing: Not collected
arcsine_fledge_success_clutch
Missing: Not collected
arcsine_hatching_success
1.570796327
area
Trinidad
assigned_from_geo
TRUE
backup
TRUE
bird_family
Muscicapidae
bird_order
Passeriformes
broken_eggs
1
brood_size
4
clutch_size
5
code_id_statistica
197
coll_date_juliane_days
124
collection date
5/5/07 0:00
collection_timestamp
5/5/07
common name
organismal metagenome
country
GAZ:Spain
country_nation
Spain
country_region
Hoya de Guadix
culturing_date
5/11/07
depth
0
dna_extracted
TRUE
elevation
1260
empo_0
EMP sample
empo_1
Host-associated
empo_2
Animal
empo_3
Animal surface
enterobacteriaceae_density
872978482.1
enterococcus_density
2.600460551
env biome
mediterranean shrubland biome
env feature
nest of bird
env matter
egg
env package
host-associated
eppendorf_name
Collalba Trinidad.2
estefania_plates
3H04
extracted DNA avail now
TRUE
feathers
TRUE
fledge_success_brood
Missing: Not collected
fledge_success_clutch
Missing: Not collected
fledging_date
Missing: Not collected
geo loc name
Spain:Hoya de Guadix
hatching_date
5/11/07
hatching_success
1
hatching_synchrony
asyn
host common name
Black weathear
host scientific name
Passeriformes
host subject id
Collalbanegra.ColTri.2
host taxid
391703
latitude
37.28771389
lay_date_juliane_days
110
laying_date
7/20/07
log_enterobacteriaceae_density
8.941003539
log_enterococcus_density
0.556358057
log_mesophiles_density
7.392570707
log_rel_growth_enterobact
8.844294244
log_rel_growth_enterococcus
0.556358057
log_rel_growth_mesophiles
6.633732511
log_rel_growth_staphylococcus
0
log_staphylococcus_density
0
longitude
-3.002538889
mesophiles_density
24692819.92
nest_type
hole
number_fledging
Missing: Not provided
number_sampled_eggs
5
observer
Juan
physical_specimen_location
CCME
physical_specimen_remaining
TRUE
plants
FALSE
platero_plates
P8C04
public
TRUE
rel_growth_enterobacteriaceae
698705630.3
rel_growth_enterococcus
2.600460551
rel_growth_staphylococcus
0
relative_growth_mesophiles
4302614.239
required_sample_info_status
completed
sample name
qiita_sid_1632:1632.E3H04.Knight16sV4.JuannaBirdEMP.NoIndex.L005.R1.001.sequences
sample type
bird egg shell
sample_nest
Collalbanegra.ColTri.2
sample_progress
sequenced (16S)
sampling time
2
sampling_code_id
225
species name
Oenanthe leucura
staphylococcus_density
0
storing_days
6
unhatched_eggs
0
year
2007