1632.E4A10.Knight16sV4.JuannaBirdEMP.NoIndex.L005.R1.001.sequences; Bird Egg Shells from Spain
bird metagenome
Bird Egg Shells from nest Urraca.UTG1B.1
ENA first public
2016-07-13
ENA last update
2016-07-13
External Id
SAMEA4076368
INSDC center alias
UCSDMI
INSDC center name
University of California San Diego Microbiome Initiative
INSDC first public
2016-07-13T17:01:27Z
INSDC last update
2016-07-13T01:15:06Z
INSDC status
public
Submitter Id
qiita_sid_1632:1632.E4A10.Knight16sV4.JuannaBirdEMP.NoIndex.L005.R1.001.sequences
abandoned
No
altitude
0
anonymized name
E4A10
arcsine_fledge_success_brood
Missing: Not collected
arcsine_fledge_success_clutch
Missing: Not collected
arcsine_hatching_success
Missing: Not collected
area
Torre Guajar
assigned_from_geo
TRUE
backup
TRUE
bird_family
Corvidae
bird_order
Passeriformes
broken_eggs
Missing: Not collected
brood_size
Missing: Not collected
clutch_size
2
code_id_statistica
571
coll_date_juliane_days
138
collection date
5/19/07 0:00
collection_timestamp
5/19/07
comments_in_spanish
Parasitado
common name
organismal metagenome
country
GAZ:Spain
country_nation
Spain
country_region
Hoya de Guadix
culturing_date
5/24/07
depth
0
dna_extracted
TRUE
elevation
1039
empo_0
EMP sample
empo_1
Host-associated
empo_2
Animal
empo_3
Animal surface
enterobacteriaceae_density
649243.8823
enterococcus_density
0
env biome
mediterranean shrubland biome
env feature
nest of bird
env matter
egg
env package
host-associated
eppendorf_name
UTG1B.1
estefania_plates
4A10
extracted DNA avail now
TRUE
feathers
FALSE
fledge_success_brood
Missing: Not collected
fledge_success_clutch
Missing: Not collected
fledging_date
Missing: Not collected
geo loc name
Spain:Hoya de Guadix
hatching_date
Missing: Not collected
hatching_success
Missing: Not collected
hatching_synchrony
asyn
host common name
Black-billed Magpie
host scientific name
Passeriformes
host subject id
Urraca.UTG1B.1
host taxid
34924
latitude
37.38953889
lay_date_juliane_days
130
laying_date
8/9/07
log_enterobacteriaceae_density
5.812408535
log_enterococcus_density
0
log_mesophiles_density
6.230551516
log_rel_growth_enterobact
-4.211401837
log_rel_growth_enterococcus
0.305667237
log_rel_growth_mesophiles
0.35654718
log_rel_growth_staphylococcus
1.173546639
log_staphylococcus_density
0
longitude
-3.098552778
mesophiles_density
1700400.644
nest_type
open
number_fledging
Missing: Not provided
number_sampled_eggs
2
observer
Juanma
physical_specimen_location
CCME
physical_specimen_remaining
TRUE
plants
TRUE
platero_plates
P4C06
predated
parasited
public
TRUE
rel_growth_enterobacteriaceae
-0.999938539
rel_growth_enterococcus
1.021469705
rel_growth_staphylococcus
13.91236891
relative_growth_mesophiles
1.272726524
required_sample_info_status
completed
sample name
qiita_sid_1632:1632.E4A10.Knight16sV4.JuannaBirdEMP.NoIndex.L005.R1.001.sequences
sample type
bird egg shell
sample_nest
Urraca.UTG1B.1
sample_progress
sequenced (16S)
sampling time
1
sampling_code_id
392
species name
Pica pica
staphylococcus_density
0
storing_days
5
unhatched_eggs
Missing: Not provided
year
2007