1632.E5D11.Knight16sV4.JuannaBirdEMP.NoIndex.L005.R1.001.sequences; Bird Egg Shells from Spain
bird metagenome
Bird Egg Shells from nest Autillo.Teg727.2
ENA first public
2016-07-13
ENA last update
2016-07-13
External Id
SAMEA4076513
INSDC center alias
UCSDMI
INSDC center name
University of California San Diego Microbiome Initiative
INSDC first public
2016-07-13T17:01:27Z
INSDC last update
2016-07-13T01:15:11Z
INSDC status
public
Submitter Id
qiita_sid_1632:1632.E5D11.Knight16sV4.JuannaBirdEMP.NoIndex.L005.R1.001.sequences
abandoned
No
altitude
0
anonymized name
E5D11
arcsine_fledge_success_brood
0.070769737
arcsine_fledge_success_clutch
0.070769737
arcsine_hatching_success
1.570796327
area
Tegeda
assigned_from_geo
TRUE
backup
TRUE
bird_family
Strigidae
bird_order
Strigiformes
broken_eggs
0
brood_size
4
clutch_size
4
code_id_statistica
94
coll_date_juliane_days
152
collection date
6/2/07 0:00
collection_timestamp
6/2/07
common name
organismal metagenome
country
GAZ:Spain
country_nation
Spain
country_region
Hoya de Guadix
culturing_date
6/14/07
depth
0
dna_extracted
TRUE
elevation
977
empo_0
EMP sample
empo_1
Host-associated
empo_2
Animal
empo_3
Animal surface
enterobacteriaceae_density
9.146795165
enterococcus_density
6720.685045
env biome
mediterranean shrubland biome
env feature
nest of bird
env matter
egg
env package
host-associated
eppendorf_name
Teg 727 I 2
estefania_plates
5D11
extracted DNA avail now
TRUE
feathers
FALSE
fledge_success_brood
0.5
fledge_success_clutch
0.5
fledging_date
7/7/07
geo loc name
Spain:Hoya de Guadix
hatching_date
6/8/07
hatching_success
1
hatching_synchrony
asyn
host common name
Eurasian scops-owl
host scientific name
Strigiformes
host subject id
Autillo.Teg727.2
host taxid
126827
latitude
37.29330833
lay_date_juliane_days
129
laying_date
8/8/07
log_enterobacteriaceae_density
1.006328893
log_enterococcus_density
3.827478159
log_mesophiles_density
0
log_rel_growth_enterobact
0.505770492
log_rel_growth_enterococcus
3.622879945
log_rel_growth_mesophiles
-6.335728067
log_rel_growth_staphylococcus
-0.133876538
log_staphylococcus_density
0
longitude
-3.106508333
mesophiles_density
0
nest_type
hole
number_fledging
2
number_sampled_eggs
4
observer
Juan
physical_specimen_location
CCME
physical_specimen_remaining
TRUE
plants
FALSE
platero_plates
P5D09
predated
No
public
TRUE
rel_growth_enterobacteriaceae
2.204575384
rel_growth_enterococcus
4195.429632
rel_growth_staphylococcus
-0.265277293
relative_growth_mesophiles
-0.999999538
required_sample_info_status
completed
sample name
qiita_sid_1632:1632.E5D11.Knight16sV4.JuannaBirdEMP.NoIndex.L005.R1.001.sequences
sample type
bird egg shell
sample_nest
Autillo.Teg727.2
sample_progress
sequenced (16S)
sampling time
2
sampling_code_id
515
species name
Otus scops
staphylococcus_density
0
storing_days
12
unhatched_eggs
0
year
2007