Bird Egg Shells from Spain; 1632.E5D08.Knight16sV4.JuannaBirdEMP.NoIndex.L005.R1.001.sequences
bird metagenome
Bird Egg Shells from nest Carraca.CA10.1
ENA first public
2016-07-13
ENA last update
2016-07-13
External Id
SAMEA4076509
INSDC center alias
UCSDMI
INSDC center name
University of California San Diego Microbiome Initiative
INSDC first public
2016-07-13T17:01:26Z
INSDC last update
2016-07-13T01:15:11Z
INSDC status
public
Submitter Id
qiita_sid_1632:1632.E5D08.Knight16sV4.JuannaBirdEMP.NoIndex.L005.R1.001.sequences
altitude
0
anonymized name
E5D08
arcsine_fledge_success_brood
0
arcsine_fledge_success_clutch
0
arcsine_hatching_success
0.684719203
area
Fuentealamo
assigned_from_geo
TRUE
backup
TRUE
bird_family
Coraciidae
bird_order
Coraciiformes
broken_eggs
0
brood_size
2
clutch_size
5
code_id_statistica
148
coll_date_juliane_days
153
collection date
6/3/07 0:00
collection_timestamp
6/3/07
common name
organismal metagenome
country
GAZ:Spain
country_nation
Spain
country_region
Hoya de Guadix
culturing_date
6/20/07
depth
0
dna_extracted
TRUE
elevation
1145
empo_0
EMP sample
empo_1
Host-associated
empo_2
Animal
empo_3
Animal surface
enterobacteriaceae_density
2231478.018
enterococcus_density
196700.6549
env biome
mediterranean shrubland biome
env feature
nest of bird
env matter
egg
env package
host-associated
eppendorf_name
CA10.1
estefania_plates
5D08
extracted DNA avail now
TRUE
feathers
FALSE
fledge_success_brood
0
fledge_success_clutch
0
fledging_date
Missing: Not collected
geo loc name
Spain:Hoya de Guadix
hatching_date
6/18/07
hatching_success
0.4
hatching_synchrony
asyn
host common name
European roller
host scientific name
Coraciiformes
host subject id
Carraca.CA10.1
host taxid
188338
latitude
37.34600556
lay_date_juliane_days
133
laying_date
8/12/07
log_enterobacteriaceae_density
6.348592808
log_enterococcus_density
5.293808014
log_mesophiles_density
7.110353481
log_rel_growth_enterobact
0.212088837
log_rel_growth_enterococcus
-4.549215012
log_rel_growth_mesophiles
0.806875373
log_rel_growth_staphylococcus
0
log_staphylococcus_density
0
longitude
-3.061197222
mesophiles_density
12892984.1
nest_type
hole
number_fledging
0
number_sampled_eggs
5
observer
Juanma
physical_specimen_location
CCME
physical_specimen_remaining
TRUE
plants
FALSE
platero_plates
P5B09
public
TRUE
rel_growth_enterobacteriaceae
0.629629347
rel_growth_enterococcus
-0.999971765
rel_growth_staphylococcus
0
relative_growth_mesophiles
5.410255991
required_sample_info_status
completed
sample name
qiita_sid_1632:1632.E5D08.Knight16sV4.JuannaBirdEMP.NoIndex.L005.R1.001.sequences
sample type
bird egg shell
sample_nest
Carraca.CA10.1
sample_progress
sequenced (16S)
sampling time
1
sampling_code_id
540
species name
Coracias garrulus
staphylococcus_density
0
storing_days
17
unhatched_eggs
3
year
2007