Bird Egg Shells from Spain; 1632.E6C09.Knight16sV4.JuannaBirdEMP.NoIndex.L005.R1.001.sequences
bird metagenome
Bird Egg Shells from nest Abubilla.4.2
ENA first public
2016-07-13
ENA last update
2016-07-13
External Id
SAMEA4076594
INSDC center alias
UCSDMI
INSDC center name
University of California San Diego Microbiome Initiative
INSDC first public
2016-07-13T17:01:27Z
INSDC last update
2016-07-13T01:15:14Z
INSDC status
public
Submitter Id
qiita_sid_1632:1632.E6C09.Knight16sV4.JuannaBirdEMP.NoIndex.L005.R1.001.sequences
abandoned
No
altitude
0
anonymized name
E6C09
arcsine_fledge_success_brood
0.081740653
arcsine_fledge_success_clutch
0.053477735
arcsine_hatching_success
Missing: Not collected
area
Via
assigned_from_geo
TRUE
backup
TRUE
bird_family
Upuidae
bird_order
Upupiformes
broken_eggs
Missing: Not collected
brood_size
Missing: Not collected
clutch_size
7
code_id_statistica
17
coll_date_juliane_days
160
collection date
6/10/07 0:00
collection_timestamp
6/10/07
common name
organismal metagenome
country
GAZ:Spain
country_nation
Spain
country_region
Hoya de Guadix
culturing_date
6/26/07
depth
0
dna_extracted
TRUE
elevation
947
empo_0
EMP sample
empo_1
Host-associated
empo_2
Animal
empo_3
Animal surface
enterobacteriaceae_density
1425646.576
enterococcus_density
7871.757141
env biome
mediterranean shrubland biome
env feature
nest of bird
env matter
egg
env package
host-associated
eppendorf_name
5.2
estefania_plates
6C08
extracted DNA avail now
TRUE
feathers
FALSE
fledge_success_brood
0.666666667
fledge_success_clutch
0.285714286
fledging_date
6/24/07
geo loc name
Spain:Hoya de Guadix
hatching_date
Missing: Not collected
hatching_success
Missing: Not collected
hatching_synchrony
asyn
host common name
Eurasian hoopoe
host scientific name
Upupiformes
host subject id
Abubilla.4.2
host taxid
57439
latitude
37.31146944
lay_date_juliane_days
136
laying_date
8/15/07
log_enterobacteriaceae_density
6.15401218
log_enterococcus_density
3.896126855
log_mesophiles_density
6.807224457
log_rel_growth_enterobact
-0.229535453
log_rel_growth_enterococcus
-1.246096626
log_rel_growth_mesophiles
-0.005139639
log_rel_growth_staphylococcus
0.608964076
log_staphylococcus_density
0.707462348
longitude
-3.119497222
mesophiles_density
6415409.594
nest_type
hole
number_fledging
2
number_sampled_eggs
7
observer
Manolo
physical_specimen_location
CCME
physical_specimen_remaining
TRUE
plants
FALSE
platero_plates
P6C06
predated
No
public
TRUE
rel_growth_enterobacteriaceae
-0.410526146
rel_growth_enterococcus
-0.943258165
rel_growth_staphylococcus
3.064097101
relative_growth_mesophiles
-0.011764704
required_sample_info_status
completed
sample name
qiita_sid_1632:1632.E6C09.Knight16sV4.JuannaBirdEMP.NoIndex.L005.R1.001.sequences
sample type
bird egg shell
sample_nest
Abubilla.4.2
sample_progress
sequenced (16S)
sampling time
2
sampling_code_id
577
species name
Upupa epops
staphylococcus_density
4.098733907
storing_days
16
unhatched_eggs
Missing: Not provided
year
2007