Bird Egg Shells from Spain; 1632.E5B08.Knight16sV4.JuannaBirdEMP.NoIndex.L005.R1.001.sequences
bird metagenome
Bird Egg Shells from nest Carraca.58.1
ENA first public
2016-07-13
ENA last update
2016-07-13
External Id
SAMEA4076482
INSDC center alias
UCSDMI
INSDC center name
University of California San Diego Microbiome Initiative
INSDC first public
2016-07-13T17:01:27Z
INSDC last update
2016-07-13T01:15:10Z
INSDC status
public
Submitter Id
qiita_sid_1632:1632.E5B08.Knight16sV4.JuannaBirdEMP.NoIndex.L005.R1.001.sequences
abandoned
No
altitude
0
anonymized name
E5B08
arcsine_fledge_success_brood
0.100167421
arcsine_fledge_success_clutch
0.100167421
arcsine_hatching_success
1.570796327
area
Cortijo Perro
assigned_from_geo
TRUE
backup
TRUE
bird_family
Coraciidae
bird_order
Coraciiformes
broken_eggs
0
brood_size
6
clutch_size
6
code_id_statistica
137
coll_date_juliane_days
153
collection date
6/3/07 0:00
collection_timestamp
6/3/07
common name
organismal metagenome
country
GAZ:Spain
country_nation
Spain
country_region
Hoya de Guadix
culturing_date
6/20/07
depth
0
dna_extracted
TRUE
elevation
1160
empo_0
EMP sample
empo_1
Host-associated
empo_2
Animal
empo_3
Animal surface
enterobacteriaceae_density
7361288.985
enterococcus_density
101379.1553
env biome
mediterranean shrubland biome
env feature
nest of bird
env matter
egg
env package
host-associated
eppendorf_name
58.1
estefania_plates
5B08
extracted DNA avail now
TRUE
feathers
FALSE
fledge_success_brood
1
fledge_success_clutch
1
fledging_date
Missing: Not collected
geo loc name
Spain:Hoya de Guadix
hatching_date
6/15/07
hatching_success
1
hatching_synchrony
asyn
host common name
European roller
host scientific name
Coraciiformes
host subject id
Carraca.58.1
host taxid
188338
latitude
37.32654722
lay_date_juliane_days
143
laying_date
8/22/07
log_enterobacteriaceae_density
6.866953926
log_enterococcus_density
5.005952952
log_mesophiles_density
6.38983279
log_rel_growth_enterobact
-1.102661654
log_rel_growth_enterococcus
-1.125751605
log_rel_growth_mesophiles
0.092314227
log_rel_growth_staphylococcus
0
log_staphylococcus_density
0
longitude
-3.059219444
mesophiles_density
2453762.995
nest_type
hole
number_fledging
6
number_sampled_eggs
6
observer
Juanma
physical_specimen_location
CCME
physical_specimen_remaining
TRUE
plants
FALSE
platero_plates
P5B07
predated
No
public
TRUE
rel_growth_enterobacteriaceae
-0.921052506
rel_growth_enterococcus
-0.925140246
rel_growth_staphylococcus
0
relative_growth_mesophiles
0.236842009
required_sample_info_status
completed
sample name
qiita_sid_1632:1632.E5B08.Knight16sV4.JuannaBirdEMP.NoIndex.L005.R1.001.sequences
sample type
bird egg shell
sample_nest
Carraca.58.1
sample_progress
sequenced (16S)
sampling time
1
sampling_code_id
541
species name
Coracias garrulus
staphylococcus_density
0
storing_days
17
unhatched_eggs
0
year
2007