Bird Egg Shells from Spain; 1632.E4B05.Knight16sV4.JuannaBirdEMP.NoIndex.L005.R1.001.sequences
bird metagenome
Bird Egg Shells from nest Grajilla.Gra3.2
ENA first public
2016-07-13
ENA last update
2016-07-13
External Id
SAMEA4076377
INSDC center alias
UCSDMI
INSDC center name
University of California San Diego Microbiome Initiative
INSDC first public
2016-07-13T17:01:27Z
INSDC last update
2016-07-13T01:15:07Z
INSDC status
public
Submitter Id
qiita_sid_1632:1632.E4B05.Knight16sV4.JuannaBirdEMP.NoIndex.L005.R1.001.sequences
abandoned
No
altitude
0
anonymized name
E4B05
arcsine_fledge_success_brood
0.100167421
arcsine_fledge_success_clutch
0.081740653
arcsine_hatching_success
1.150261544
area
Hueneja
assigned_from_geo
TRUE
backup
FALSE
bird_family
Corvidae
bird_order
Passeriformes
broken_eggs
0
brood_size
5
clutch_size
6
code_id_statistica
357
coll_date_juliane_days
141
collection date
5/22/07 0:00
collection_timestamp
5/21/07
common name
organismal metagenome
country
GAZ:Spain
country_nation
Spain
country_region
Hoya de Guadix
culturing_date
5/29/07
depth
0
dna_extracted
TRUE
elevation
1228
empo_0
EMP sample
empo_1
Host-associated
empo_2
Animal
empo_3
Animal surface
enterobacteriaceae_density
477631.2758
enterococcus_density
6.190259863
env biome
mediterranean shrubland biome
env feature
nest of bird
env matter
egg
env package
host-associated
eppendorf_name
GRA 3.2
estefania_plates
4B05
extracted DNA avail now
TRUE
feathers
TRUE
fledge_success_brood
1
fledge_success_clutch
0.666666667
fledging_date
6/15/07
geo loc name
Spain:Hoya de Guadix
hatching_date
5/25/07
hatching_success
0.833333
hatching_synchrony
asyn
host common name
Jackdaw
host scientific name
Passeriformes
host subject id
Grajilla.Gra3.2
host taxid
30423
latitude
37.17932778
lay_date_juliane_days
119
laying_date
7/29/07
log_enterobacteriaceae_density
5.679093666
log_enterococcus_density
0.856744587
log_mesophiles_density
6.094066455
log_rel_growth_enterobact
0.258245176
log_rel_growth_enterococcus
-0.075961449
log_rel_growth_mesophiles
-0.347714452
log_rel_growth_staphylococcus
0.041968816
log_staphylococcus_density
0.075930909
longitude
-2.957352778
mesophiles_density
1241841.317
nest_type
hole
number_fledging
4
number_sampled_eggs
6
observer
Juan
physical_specimen_location
CCME
physical_specimen_remaining
TRUE
plants
TRUE
platero_plates
P3H02
predated
No
public
TRUE
rel_growth_enterobacteriaceae
0.812362951
rel_growth_enterococcus
-0.160465495
rel_growth_staphylococcus
0.101460218
relative_growth_mesophiles
-0.550959464
required_sample_info_status
completed
sample name
qiita_sid_1632:1632.E4B05.Knight16sV4.JuannaBirdEMP.NoIndex.L005.R1.001.sequences
sample type
bird egg shell
sample_nest
Grajilla.Gra3.2
sample_progress
sequenced (16S)
sampling time
2
sampling_code_id
456
species name
Corvus monedula
staphylococcus_density
0.19105251
storing_days
7
unhatched_eggs
1
year
2007