Bird Egg Shells from Spain; 1632.E4D02.Knight16sV4.JuannaBirdEMP.NoIndex.L005.R1.001.sequences
bird metagenome
Bird Egg Shells from nest Urraca.cc9a.2
ENA first public
2016-07-13
ENA last update
2016-07-13
External Id
SAMEA4076399
INSDC center alias
UCSDMI
INSDC center name
University of California San Diego Microbiome Initiative
INSDC first public
2016-07-13T17:01:27Z
INSDC last update
2016-07-13T01:15:07Z
INSDC status
public
Submitter Id
qiita_sid_1632:1632.E4D02.Knight16sV4.JuannaBirdEMP.NoIndex.L005.R1.001.sequences
altitude
0
anonymized name
E4D02
arcsine_fledge_success_brood
Missing: Not collected
arcsine_fledge_success_clutch
Missing: Not collected
arcsine_hatching_success
1.570796327
area
Charches
assigned_from_geo
TRUE
backup
FALSE
bird_family
Corvidae
bird_order
Passeriformes
broken_eggs
0
brood_size
6
clutch_size
6
code_id_statistica
507
coll_date_juliane_days
129
collection date
5/10/07 0:00
collection_timestamp
5/10/07
common name
organismal metagenome
country
GAZ:Spain
country_nation
Spain
country_region
Hoya de Guadix
culturing_date
5/14/07
depth
0
dna_extracted
TRUE
elevation
1310
empo_0
EMP sample
empo_1
Host-associated
empo_2
Animal
empo_3
Animal surface
enterobacteriaceae_density
1580802.035
enterococcus_density
2705.00348
env biome
mediterranean shrubland biome
env feature
nest of bird
env matter
egg
env package
host-associated
eppendorf_name
cc9A
estefania_plates
4D02
extracted DNA avail now
TRUE
feathers
FALSE
fledge_success_brood
Missing: Not collected
fledge_success_clutch
Missing: Not collected
fledging_date
Missing: Not collected
geo loc name
Spain:Hoya de Guadix
hatching_date
5/10/07
hatching_success
1
hatching_synchrony
asyn
host common name
Black-billed Magpie
host scientific name
Passeriformes
host subject id
Urraca.cc9a.2
host taxid
34924
latitude
37.28454722
lay_date_juliane_days
105
laying_date
7/15/07
log_enterobacteriaceae_density
6.198877761
log_enterococcus_density
3.432328351
log_mesophiles_density
6.367282103
log_rel_growth_enterobact
6.198877761
log_rel_growth_enterococcus
3.368326225
log_rel_growth_mesophiles
5.818214014
log_rel_growth_staphylococcus
2.0767578
log_staphylococcus_density
2.140759926
longitude
-2.985819444
mesophiles_density
2329602.999
nest_type
open
number_fledging
Missing: Not provided
number_sampled_eggs
6
observer
Juan
physical_specimen_location
CCME
physical_specimen_remaining
TRUE
plants
TRUE
platero_plates
P3F04
public
TRUE
rel_growth_enterobacteriaceae
1580802.035
rel_growth_enterococcus
2334.211523
rel_growth_staphylococcus
118.332242
relative_growth_mesophiles
657981.002
required_sample_info_status
completed
sample name
qiita_sid_1632:1632.E4D02.Knight16sV4.JuannaBirdEMP.NoIndex.L005.R1.001.sequences
sample type
bird egg shell
sample_nest
Urraca.cc9a.2
sample_progress
sequenced (16S)
sampling time
2
sampling_code_id
331
species name
Pica pica
staphylococcus_density
137.2801767
storing_days
4
unhatched_eggs
0
year
2007