1632.E5E09.r.EMPbird.v4.NoIndex.L001; Bird Egg Shells from Spain
bird metagenome
Bird Egg Shells from nest Abubilla.CastIzq.1
ENA first public
2016-07-13
ENA last update
2016-07-13
External Id
SAMEA4076524
INSDC center alias
UCSDMI
INSDC center name
University of California San Diego Microbiome Initiative
INSDC first public
2016-07-13T17:01:27Z
INSDC last update
2016-07-13T01:15:11Z
INSDC status
public
Submitter Id
qiita_sid_1632:1632.E5E09.r.EMPbird.v4.NoIndex.L001
altitude
0
anonymized name
E5E09
arcsine_fledge_success_brood
Missing: Not collected
arcsine_fledge_success_clutch
Missing: Not collected
arcsine_hatching_success
1.570796327
area
Tegeda
assigned_from_geo
TRUE
backup
TRUE
bird_family
Upuidae
bird_order
Upupiformes
broken_eggs
0
brood_size
7
clutch_size
7
code_id_statistica
55
coll_date_juliane_days
155
collection date
6/5/07 0:00
collection_timestamp
6/5/07
common name
organismal metagenome
country
GAZ:Spain
country_nation
Spain
country_region
Hoya de Guadix
culturing_date
6/20/07
depth
0
dna_extracted
TRUE
elevation
977
empo_0
EMP sample
empo_1
Host-associated
empo_2
Animal
empo_3
Animal surface
enterobacteriaceae_density
12625766.46
enterococcus_density
1293000.179
env biome
mediterranean shrubland biome
env feature
nest of bird
env matter
egg
env package
host-associated
eppendorf_name
Castano I 29
estefania_plates
5.00E+09
extracted DNA avail now
TRUE
feathers
FALSE
fledge_success_brood
Missing: Not collected
fledge_success_clutch
Missing: Not collected
fledging_date
Missing: Not collected
geo loc name
Spain:Hoya de Guadix
hatching_date
6/15/07
hatching_success
1
hatching_synchrony
asyn
host common name
Eurasian hoopoe
host scientific name
Upupiformes
host subject id
Abubilla.CastIzq.1
host taxid
57439
latitude
37.29330833
lay_date_juliane_days
141
laying_date
8/20/07
log_enterobacteriaceae_density
7.101257786
log_enterococcus_density
6.111598921
log_mesophiles_density
6.872375798
log_rel_growth_enterobact
Missing: Not provided
log_rel_growth_enterococcus
Missing: Not provided
log_rel_growth_mesophiles
Missing: Not provided
log_rel_growth_staphylococcus
Missing: Not provided
log_staphylococcus_density
0.845634242
longitude
-3.106508333
mesophiles_density
7453765.74
nest_type
hole
number_fledging
Missing: Not provided
number_sampled_eggs
7
observer
Juan
physical_specimen_location
CCME
physical_specimen_remaining
TRUE
plants
FALSE
platero_plates
P5C06
public
TRUE
required_sample_info_status
completed
sample name
qiita_sid_1632:1632.E5E09.r.EMPbird.v4.NoIndex.L001
sample type
bird egg shell
sample_nest
Abubilla.CastIzq.1
sample_progress
sequenced (16S)
sampling time
1
sampling_code_id
549
species name
Upupa epops
staphylococcus_density
6.008647892
storing_days
15
unhatched_eggs
0
year
2007