1632.E5H08.Knight16sV4.JuannaBirdEMP.NoIndex.L005.R1.001.sequences; Bird Egg Shells from Spain
bird metagenome
Bird Egg Shells from nest Autillo.832.1
ENA first public
2016-07-13
ENA last update
2016-07-13
External Id
SAMEA4076561
INSDC center alias
UCSDMI
INSDC center name
University of California San Diego Microbiome Initiative
INSDC first public
2016-07-13T17:01:27Z
INSDC last update
2016-07-13T01:15:13Z
INSDC status
public
Submitter Id
qiita_sid_1632:1632.E5H08.Knight16sV4.JuannaBirdEMP.NoIndex.L005.R1.001.sequences
altitude
0
anonymized name
E5H08
arcsine_fledge_success_brood
Missing: Not collected
arcsine_fledge_success_clutch
Missing: Not collected
arcsine_hatching_success
1.570796327
area
Torre Guajar
assigned_from_geo
TRUE
backup
TRUE
bird_family
Strigidae
bird_order
Strigiformes
broken_eggs
0
brood_size
5
clutch_size
5
code_id_statistica
80
coll_date_juliane_days
153
collection date
6/3/07 0:00
collection_timestamp
6/3/07
common name
organismal metagenome
country
GAZ:Spain
country_nation
Spain
country_region
Hoya de Guadix
culturing_date
6/20/07
depth
0
dna_extracted
TRUE
elevation
1039
empo_0
EMP sample
empo_1
Host-associated
empo_2
Animal
empo_3
Animal surface
enterobacteriaceae_density
1662414.944
enterococcus_density
778401.3504
env biome
mediterranean shrubland biome
env feature
nest of bird
env matter
egg
env package
host-associated
eppendorf_name
832.1
estefania_plates
5H08
extracted DNA avail now
TRUE
feathers
FALSE
fledge_success_brood
Missing: Not collected
fledge_success_clutch
Missing: Not collected
fledging_date
Missing: Not collected
geo loc name
Spain:Hoya de Guadix
hatching_date
6/24/07
hatching_success
1
hatching_synchrony
asyn
host common name
Eurasian scops-owl
host scientific name
Strigiformes
host subject id
Autillo.832.1
host taxid
126827
latitude
37.38953889
lay_date_juliane_days
144
laying_date
8/23/07
log_enterobacteriaceae_density
6.220739696
log_enterococcus_density
5.891204139
log_mesophiles_density
7.689260526
log_rel_growth_enterobact
0.200914746
log_rel_growth_enterococcus
-0.938692497
log_rel_growth_mesophiles
-0.872895144
log_rel_growth_staphylococcus
-0.077577998
log_staphylococcus_density
0.077577998
longitude
-3.098552778
mesophiles_density
48894557.18
nest_type
hole
number_fledging
Missing: Not provided
number_sampled_eggs
5
observer
Juanma
physical_specimen_location
CCME
physical_specimen_remaining
TRUE
plants
FALSE
platero_plates
P5C01
public
TRUE
rel_growth_enterobacteriaceae
0.58823494
rel_growth_enterococcus
-0.88483845
rel_growth_staphylococcus
-0.163584635
relative_growth_mesophiles
-0.865999982
required_sample_info_status
completed
sample name
qiita_sid_1632:1632.E5H08.Knight16sV4.JuannaBirdEMP.NoIndex.L005.R1.001.sequences
sample type
bird egg shell
sample_nest
Autillo.832.1
sample_progress
sequenced (16S)
sampling time
1
sampling_code_id
536
species name
Otus scops
staphylococcus_density
0.195578229
storing_days
17
unhatched_eggs
0
year
2007