Bird Egg Shells from Spain; 1632.E5D07.Knight16sV4.JuannaBirdEMP.NoIndex.L005.R1.001.sequences
bird metagenome
Bird Egg Shells from nest Carbonero.848.2
ENA first public
2016-07-13
ENA last update
2016-07-13
External Id
SAMEA4076508
INSDC center alias
UCSDMI
INSDC center name
University of California San Diego Microbiome Initiative
INSDC first public
2016-07-13T17:01:26Z
INSDC last update
2016-07-13T01:15:11Z
INSDC status
public
Submitter Id
qiita_sid_1632:1632.E5D07.Knight16sV4.JuannaBirdEMP.NoIndex.L005.R1.001.sequences
abandoned
No
altitude
0
anonymized name
E5D07
arcsine_fledge_success_brood
0.100167421
arcsine_fledge_success_clutch
0.090577205
arcsine_hatching_success
1.570796327
area
Cortijo Conejo
assigned_from_geo
TRUE
backup
TRUE
bird_family
Paridae
bird_order
Passeriformes
broken_eggs
1
brood_size
11
clutch_size
12
code_id_statistica
111
coll_date_juliane_days
149
collection date
5/30/07 0:00
collection_timestamp
5/30/07
comments_in_spanish
Sin datos de los pollos
common name
organismal metagenome
country
GAZ:Spain
country_nation
Spain
country_region
Hoya de Guadix
culturing_date
6/13/07
depth
0
dna_extracted
TRUE
elevation
1055
empo_0
EMP sample
empo_1
Host-associated
empo_2
Animal
empo_3
Animal surface
enterobacteriaceae_density
22266034.92
enterococcus_density
1
env biome
mediterranean shrubland biome
env feature
nest of bird
env matter
egg
env package
host-associated
eppendorf_name
848.2
estefania_plates
5D07
extracted DNA avail now
TRUE
feathers
TRUE
fledge_success_brood
1
fledge_success_clutch
0.818181818
fledging_date
6/15/07
geo loc name
Spain:Hoya de Guadix
hatching_date
6/5/07
hatching_success
1
hatching_synchrony
asyn
host common name
Great tit
host scientific name
Passeriformes
host subject id
Carbonero.848.2
host taxid
9157
latitude
37.40583611
lay_date_juliane_days
124
laying_date
8/3/07
log_enterobacteriaceae_density
7.347642905
log_enterococcus_density
0.301029996
log_mesophiles_density
7.89378791
log_rel_growth_enterobact
0.719321981
log_rel_growth_enterococcus
-5.230382091
log_rel_growth_mesophiles
-0.088269263
log_rel_growth_staphylococcus
0
log_staphylococcus_density
0
longitude
-3.082122222
mesophiles_density
78304713.4
nest_type
hole
number_fledging
9
number_sampled_eggs
11
observer
Juanma
physical_specimen_location
CCME
physical_specimen_remaining
TRUE
plants
FALSE
platero_plates
P5B01
predated
No
public
TRUE
rel_growth_enterobacteriaceae
4.239887721
rel_growth_enterococcus
-0.999994117
rel_growth_staphylococcus
0
relative_growth_mesophiles
-0.183923753
required_sample_info_status
completed
sample name
qiita_sid_1632:1632.E5D07.Knight16sV4.JuannaBirdEMP.NoIndex.L005.R1.001.sequences
sample type
bird egg shell
sample_nest
Carbonero.848.2
sample_progress
sequenced (16S)
sampling time
2
sampling_code_id
495
species name
Parus major
staphylococcus_density
0
storing_days
14
unhatched_eggs
0
year
2007