Bird Egg Shells from Spain; 1632.E6F08.Knight16sV4.JuannaBirdEMP.NoIndex.L005.R1.001.sequences
bird metagenome
Bird Egg Shells from nest Gorrioncomun.Gor1.2
ENA first public
2016-07-13
ENA last update
2016-07-13
External Id
SAMEA4076623
INSDC center alias
UCSDMI
INSDC center name
University of California San Diego Microbiome Initiative
INSDC first public
2016-07-13T17:01:27Z
INSDC last update
2016-07-13T01:15:15Z
INSDC status
public
Submitter Id
qiita_sid_1632:1632.E6F08.Knight16sV4.JuannaBirdEMP.NoIndex.L005.R1.001.sequences
abandoned
No
altitude
0
anonymized name
E6F08
arcsine_fledge_success_brood
Missing: Not collected
arcsine_fledge_success_clutch
Missing: Not collected
arcsine_hatching_success
Missing: Not collected
area
Calahorra
assigned_from_geo
TRUE
backup
TRUE
bird_family
Passeridae
bird_order
Passeriformes
broken_eggs
Missing: Not collected
brood_size
Missing: Not collected
clutch_size
6
code_id_statistica
331
coll_date_juliane_days
157
collection date
6/7/07 0:00
collection_timestamp
6/7/07
comments_in_spanish
Sin datos de los pollos ni de la eclosion; 4 pollo`+2huevos
common name
organismal metagenome
country
GAZ:Spain
country_nation
Spain
country_region
Hoya de Guadix
culturing_date
6/26/07
depth
0
dna_extracted
TRUE
elevation
1106
empo_0
EMP sample
empo_1
Host-associated
empo_2
Animal
empo_3
Animal surface
enterobacteriaceae_density
34.64091998
enterococcus_density
14.70373559
env biome
mediterranean shrubland biome
env feature
nest of bird
env matter
egg
env package
host-associated
eppendorf_name
GOR 1.2
estefania_plates
6F07
extracted DNA avail now
TRUE
feathers
TRUE
fledge_success_brood
Missing: Not collected
fledge_success_clutch
Missing: Not collected
fledging_date
6/25/07
geo loc name
Spain:Hoya de Guadix
hatching_date
6/14/07
hatching_success
Missing: Not collected
hatching_synchrony
asyn
host common name
House sparrow
host scientific name
Passeriformes
host subject id
Gorrioncomun.Gor1.2
host taxid
48849
latitude
37.25371111
lay_date_juliane_days
144
laying_date
8/23/07
log_enterobacteriaceae_density
1.551948906
log_enterococcus_density
1.196002974
log_mesophiles_density
7.150298548
log_rel_growth_enterobact
-5.359875173
log_rel_growth_enterococcus
-3.835434994
log_rel_growth_mesophiles
-0.121869497
log_rel_growth_staphylococcus
0
log_staphylococcus_density
0
longitude
-3.029825
mesophiles_density
14135088.04
nest_type
hole
number_fledging
4
number_sampled_eggs
6
observer
Juanma
physical_specimen_location
CCME
physical_specimen_remaining
TRUE
plants
TRUE
platero_plates
P6C01
predated
No
public
TRUE
rel_growth_enterobacteriaceae
-0.999995634
rel_growth_enterococcus
-0.999853929
rel_growth_staphylococcus
0
relative_growth_mesophiles
-0.244680838
required_sample_info_status
completed
sample name
qiita_sid_1632:1632.E6F08.Knight16sV4.JuannaBirdEMP.NoIndex.L005.R1.001.sequences
sample type
bird egg shell
sample_nest
Gorrioncomun.Gor1.2
sample_progress
sequenced (16S)
sampling time
2
sampling_code_id
564
species name
Passer domesticus
staphylococcus_density
0
storing_days
19
unhatched_eggs
Missing: Not provided
year
2007