Bird Egg Shells from Spain; 1632.E2A11.Knight16sV4.JuannaBirdEMP.NoIndex.L005.R1.001.sequences
bird metagenome
Bird Egg Shells from nest Abubilla.11.2
ENA first public
2016-07-13
ENA last update
2016-07-13
External Id
SAMEA4076145
INSDC center alias
UCSDMI
INSDC center name
University of California San Diego Microbiome Initiative
INSDC first public
2016-07-13T17:01:27Z
INSDC last update
2016-07-13T01:15:00Z
INSDC status
public
Submitter Id
qiita_sid_1632:1632.E2A11.Knight16sV4.JuannaBirdEMP.NoIndex.L005.R1.001.sequences
abandoned
No
altitude
0
anonymized name
E2A11
arcsine_fledge_success_brood
0.100167421
arcsine_fledge_success_clutch
0.070769737
arcsine_hatching_success
0.911738291
area
Torre Guajar
assigned_from_geo
TRUE
backup
FALSE
bird_family
Upuidae
bird_order
Upupiformes
broken_eggs
0
brood_size
5
clutch_size
8
code_id_statistica
2
coll_date_juliane_days
120
collection date
5/1/07 0:00
collection_timestamp
5/1/07
common name
organismal metagenome
country
GAZ:Spain
country_nation
Spain
country_region
Hoya de Guadix
culturing_date
5/4/07
depth
0
dna_extracted
TRUE
elevation
1039
empo_0
EMP sample
empo_1
Host-associated
empo_2
Animal
empo_3
Animal surface
enterobacteriaceae_density
424191661.1
enterococcus_density
9459.327578
env biome
mediterranean shrubland biome
env feature
nest of bird
env matter
egg
env package
host-associated
eppendorf_name
11.2
estefania_plates
2A11
extracted DNA avail now
TRUE
feathers
FALSE
fledge_success_brood
1
fledge_success_clutch
0.5
fledging_date
5/22/07
geo loc name
Spain:Hoya de Guadix
hatching_date
5/4/07
hatching_success
0.625
hatching_synchrony
asyn
host common name
Eurasian hoopoe
host scientific name
Upupiformes
host subject id
Abubilla.11.2
host taxid
57439
latitude
37.38953889
lay_date_juliane_days
98
laying_date
7/8/07
log_enterobacteriaceae_density
8.627562128
log_enterococcus_density
3.975906175
log_mesophiles_density
9.536481657
log_rel_growth_enterobact
1.599718736
log_rel_growth_enterococcus
0.691011065
log_rel_growth_mesophiles
1.524813241
log_rel_growth_staphylococcus
-1.414907679
log_staphylococcus_density
0.25588124
longitude
-3.098552778
mesophiles_density
3439391846
nest_type
hole
number_fledging
4
number_sampled_eggs
8
observer
Juanma
physical_location_1
U Granada
physical_specimen_location
CCME
physical_specimen_remaining
TRUE
plants
FALSE
platero_plates
P2E11
predated
No
public
TRUE
rel_growth_enterobacteriaceae
38.7849426
rel_growth_enterococcus
3.909203842
rel_growth_staphylococcus
-0.961532645
relative_growth_mesophiles
32.48214254
required_sample_info_status
completed
sample name
qiita_sid_1632:1632.E2A11.Knight16sV4.JuannaBirdEMP.NoIndex.L005.R1.001.sequences
sample type
bird egg shell
sample_nest
Abubilla.11.2
sample_progress
sequenced (16S)
sampling time
2
sampling_code_id
161
species name
Upupa epops
staphylococcus_density
0.802524764
storing_days
3
unhatched_eggs
3
year
2007