Bird Egg Shells from Spain; 1632.E3G02.Knight16sV4.JuannaBirdEMP.NoIndex.L005.R1.001.sequences
bird metagenome
Bird Egg Shells from nest Carbonero.Teg25.1
ENA first public
2016-07-13
ENA last update
2016-07-13
External Id
SAMEA4076329
INSDC center alias
UCSDMI
INSDC center name
University of California San Diego Microbiome Initiative
INSDC first public
2016-07-13T17:01:27Z
INSDC last update
2016-07-13T01:15:05Z
INSDC status
public
Submitter Id
qiita_sid_1632:1632.E3G02.Knight16sV4.JuannaBirdEMP.NoIndex.L005.R1.001.sequences
abandoned
No
altitude
0
anonymized name
E3G02
arcsine_fledge_success_brood
0.100167421
arcsine_fledge_success_clutch
0.088306435
arcsine_hatching_success
1.079913649
area
Tegeda
assigned_from_geo
TRUE
backup
FALSE
bird_family
Paridae
bird_order
Passeriformes
broken_eggs
0
brood_size
7
clutch_size
9
code_id_statistica
130
coll_date_juliane_days
125
collection date
5/6/07 0:00
collection_timestamp
5/6/07
common name
organismal metagenome
country
GAZ:Spain
country_nation
Spain
country_region
Hoya de Guadix
culturing_date
5/11/07
depth
0
dna_extracted
TRUE
elevation
977
empo_0
EMP sample
empo_1
Host-associated
empo_2
Animal
empo_3
Animal surface
enterobacteriaceae_density
869837002.9
enterococcus_density
31.27711777
env biome
mediterranean shrubland biome
env feature
nest of bird
env matter
egg
env package
host-associated
eppendorf_name
TEG 25.1
estefania_plates
3G02
extracted DNA avail now
TRUE
feathers
TRUE
fledge_success_brood
1
fledge_success_clutch
0.777777778
fledging_date
5/31/07
geo loc name
Spain:Hoya de Guadix
hatching_date
5/19/07
hatching_success
0.777777778
hatching_synchrony
asyn
host common name
Great tit
host scientific name
Passeriformes
host subject id
Carbonero.Teg25.1
host taxid
9157
latitude
37.29330833
lay_date_juliane_days
136
laying_date
8/15/07
log_enterobacteriaceae_density
8.939437879
log_enterococcus_density
1.508894747
log_mesophiles_density
7.21182272
log_rel_growth_enterobact
-2.936498527
log_rel_growth_enterococcus
-0.78711709
log_rel_growth_mesophiles
0.657577298
log_rel_growth_staphylococcus
-1.752213762
log_staphylococcus_density
1.752213762
longitude
-3.106508333
mesophiles_density
16286309.84
nest_type
hole
number_fledging
7
number_sampled_eggs
9
observer
Juan
physical_location_1
U Granada
physical_specimen_location
CCME
physical_specimen_remaining
TRUE
plants
FALSE
platero_plates
P2H05
predated
No
public
TRUE
rel_growth_enterobacteriaceae
-0.998842552
rel_growth_enterococcus
-0.836738828
rel_growth_staphylococcus
-0.982307621
relative_growth_mesophiles
3.545454328
required_sample_info_status
completed
sample name
qiita_sid_1632:1632.E3G02.Knight16sV4.JuannaBirdEMP.NoIndex.L005.R1.001.sequences
sample type
bird egg shell
sample_nest
Carbonero.Teg25.1
sample_progress
sequenced (16S)
sampling time
1
sampling_code_id
220
species name
Parus major
staphylococcus_density
55.52151083
storing_days
5
unhatched_eggs
2
year
2007