1632.E4E10.Knight16sV4.JuannaBirdEMP.NoIndex.L005.R1.001.sequences; Bird Egg Shells from Spain
bird metagenome
Bird Egg Shells from nest Carbonero.118.2
ENA first public
2016-07-13
ENA last update
2016-07-13
External Id
SAMEA4076421
INSDC center alias
UCSDMI
INSDC center name
University of California San Diego Microbiome Initiative
INSDC first public
2016-07-13T17:01:27Z
INSDC last update
2016-07-13T01:15:08Z
INSDC status
public
Submitter Id
qiita_sid_1632:1632.E4E10.Knight16sV4.JuannaBirdEMP.NoIndex.L005.R1.001.sequences
abandoned
egg phase
altitude
0
anonymized name
E4E10
arcsine_fledge_success_brood
Missing: Not collected
arcsine_fledge_success_clutch
Missing: Not collected
arcsine_hatching_success
Missing: Not collected
area
Cortijo Conejo
assigned_from_geo
TRUE
backup
TRUE
bird_family
Paridae
bird_order
Passeriformes
broken_eggs
Missing: Not collected
brood_size
Missing: Not collected
clutch_size
10
code_id_statistica
108
coll_date_juliane_days
137
collection date
5/18/07 0:00
collection_timestamp
5/18/07
comments_in_spanish
Abandonados
common name
organismal metagenome
country
GAZ:Spain
country_nation
Spain
country_region
Hoya de Guadix
culturing_date
5/24/07
depth
0
dna_extracted
TRUE
elevation
1055
empo_0
EMP sample
empo_1
Host-associated
empo_2
Animal
empo_3
Animal surface
enterobacteriaceae_density
154937707.1
enterococcus_density
1.798782973
env biome
mediterranean shrubland biome
env feature
nest of bird
env matter
egg
env package
host-associated
eppendorf_name
118.2
estefania_plates
4.00E+10
extracted DNA avail now
TRUE
feathers
TRUE
fledge_success_brood
Missing: Not collected
fledge_success_clutch
Missing: Not collected
fledging_date
Missing: Not collected
geo loc name
Spain:Hoya de Guadix
hatching_date
Missing: Not collected
hatching_success
Missing: Not collected
hatching_synchrony
asyn
host common name
Great tit
host scientific name
Passeriformes
host subject id
Carbonero.118.2
host taxid
9157
latitude
37.40583611
lay_date_juliane_days
149
laying_date
8/28/07
log_enterobacteriaceae_density
8.190157128
log_enterococcus_density
0.446969223
log_mesophiles_density
8.279065582
log_rel_growth_enterobact
1.578903463
log_rel_growth_enterococcus
-3.979776165
log_rel_growth_mesophiles
1.148286889
log_rel_growth_staphylococcus
0.21180124
log_staphylococcus_density
0.21180124
longitude
-3.082122222
mesophiles_density
190136537.2
nest_type
hole
number_fledging
Missing: Not provided
number_sampled_eggs
10
observer
Juanma
physical_specimen_location
CCME
physical_specimen_remaining
TRUE
plants
FALSE
platero_plates
P4C010
predated
No
public
TRUE
rel_growth_enterobacteriaceae
36.92306789
rel_growth_enterococcus
-0.999895233
rel_growth_staphylococcus
0.628550536
relative_growth_mesophiles
13.06976647
required_sample_info_status
completed
sample name
qiita_sid_1632:1632.E4E10.Knight16sV4.JuannaBirdEMP.NoIndex.L005.R1.001.sequences
sample type
bird egg shell
sample_nest
Carbonero.118.2
sample_progress
sequenced (16S)
sampling time
2
sampling_code_id
387
species name
Parus major
staphylococcus_density
0.628550536
storing_days
6
unhatched_eggs
Missing: Not provided
year
2007