1632.E2D10.Knight16sV4.JuannaBirdEMP.NoIndex.L005.R1.001.sequences; Bird Egg Shells from Spain
bird metagenome
Bird Egg Shells from nest Crialo.UCON11.2
ENA first public
2016-07-13
ENA last update
2016-07-13
External Id
SAMEA4076184
INSDC center alias
UCSDMI
INSDC center name
University of California San Diego Microbiome Initiative
INSDC first public
2016-07-13T17:01:26Z
INSDC last update
2016-07-13T01:15:01Z
INSDC status
public
Submitter Id
qiita_sid_1632:1632.E2D10.Knight16sV4.JuannaBirdEMP.NoIndex.L005.R1.001.sequences
abandoned
No
altitude
0
anonymized name
E2D10
arcsine_fledge_success_brood
Missing: Not collected
arcsine_fledge_success_clutch
Missing: Not collected
arcsine_hatching_success
Missing: Not collected
area
Cortijo Conejo
assigned_from_geo
TRUE
backup
FALSE
bird_family
Cuculidae
bird_order
Cuculiformes
broken_eggs
0
brood_size
0
clutch_size
1
code_id_statistica
244
coll_date_juliane_days
120
collection date
5/1/07 0:00
collection_timestamp
5/1/07
common name
organismal metagenome
country
GAZ:Spain
country_nation
Spain
country_region
Hoya de Guadix
culturing_date
5/15/07
depth
0
dna_extracted
TRUE
elevation
1055
empo_0
EMP sample
empo_1
Host-associated
empo_2
Animal
empo_3
Animal surface
enterobacteriaceae_density
164087.1367
enterococcus_density
3282.742733
env biome
mediterranean shrubland biome
env feature
nest of bird
env matter
egg
env package
host-associated
eppendorf_name
UCON 11.4
estefania_plates
2D10
extracted DNA avail now
TRUE
feathers
FALSE
fledge_success_brood
Missing: Not collected
fledge_success_clutch
Missing: Not collected
fledging_date
Missing: Not collected
geo loc name
Spain:Hoya de Guadix
hatching_date
Missing: Not collected
hatching_success
Missing: Not collected
hatching_synchrony
asyn
host common name
Great-spotted cuckoo
host scientific name
Cuculiformes
host subject id
Crialo.UCON11.2
host taxid
78203
latitude
37.40583611
lay_date_juliane_days
104
laying_date
7/14/07
log_enterobacteriaceae_density
5.215077183
log_enterococcus_density
3.516369125
log_mesophiles_density
7.52989283
log_rel_growth_enterobact
-3.156018631
log_rel_growth_enterococcus
1.784527959
log_rel_growth_mesophiles
-1.189455209
log_rel_growth_staphylococcus
0.760710417
log_staphylococcus_density
0.760710417
longitude
-3.082122222
mesophiles_density
33876054.02
nest_type
open
number_fledging
Missing: Not provided
number_sampled_eggs
1
observer
Juanma
physical_location_1
U Granada
physical_specimen_location
CCME
physical_specimen_remaining
TRUE
plants
TRUE
platero_plates
P2E6
predated
No
public
TRUE
rel_growth_enterobacteriaceae
-0.999301798
rel_growth_enterococcus
59.88747422
rel_growth_staphylococcus
4.763820096
relative_growth_mesophiles
-0.935353534
required_sample_info_status
completed
sample name
qiita_sid_1632:1632.E2D10.Knight16sV4.JuannaBirdEMP.NoIndex.L005.R1.001.sequences
sample type
bird egg shell
sample_nest
Crialo.UCON11.2
sample_progress
sequenced (16S)
sampling time
2
sampling_code_id
166
species name
Clamator glandarius
staphylococcus_density
4.763820096
storing_days
14
unhatched_eggs
1
year
2007