1632.E3F05.Knight16sV4.JuannaBirdEMP.NoIndex.L005.R1.001.sequences; Bird Egg Shells from Spain
bird metagenome
Bird Egg Shells from nest Alcaudon.Alcaudon5.2
ENA first public
2016-07-13
ENA last update
2016-07-13
External Id
SAMEA4076319
INSDC center alias
UCSDMI
INSDC center name
University of California San Diego Microbiome Initiative
INSDC first public
2016-07-13T17:01:26Z
INSDC last update
2016-07-13T01:15:05Z
INSDC status
public
Submitter Id
qiita_sid_1632:1632.E3F05.Knight16sV4.JuannaBirdEMP.NoIndex.L005.R1.001.sequences
abandoned
No
altitude
0
anonymized name
E3F05
arcsine_fledge_success_brood
Missing: Not collected
arcsine_fledge_success_clutch
Missing: Not collected
arcsine_hatching_success
Missing: Not collected
area
Dolar
assigned_from_geo
TRUE
backup
TRUE
bird_family
Laniidae
bird_order
Passeriformes
broken_eggs
Missing: Not collected
brood_size
Missing: Not collected
clutch_size
6
code_id_statistica
65
coll_date_juliane_days
129
collection date
5/10/07 0:00
collection_timestamp
5/10/07
comments_in_spanish
Depredado
common name
organismal metagenome
country
GAZ:Spain
country_nation
Spain
country_region
Hoya de Guadix
culturing_date
5/11/07
depth
0
dna_extracted
TRUE
elevation
1154
empo_0
EMP sample
empo_1
Host-associated
empo_2
Animal
empo_3
Animal surface
enterobacteriaceae_density
2979649.698
enterococcus_density
1.023648013
env biome
mediterranean shrubland biome
env feature
nest of bird
env matter
egg
env package
host-associated
eppendorf_name
Alcaudon 5.2
estefania_plates
3F05
extracted DNA avail now
TRUE
feathers
TRUE
fledge_success_brood
Missing: Not collected
fledge_success_clutch
Missing: Not collected
fledging_date
Missing: Not collected
geo loc name
Spain:Hoya de Guadix
hatching_date
Missing: Not collected
hatching_success
Missing: Not collected
hatching_synchrony
asyn
host common name
Southern grey shrike
host scientific name
Passeriformes
host subject id
Alcaudon.Alcaudon5.2
host taxid
219215
latitude
37.19090278
lay_date_juliane_days
Missing: Not provided
laying_date
Missing: Not provided
log_enterobacteriaceae_density
6.474165355
log_enterococcus_density
0.306134975
log_mesophiles_density
6.876221842
log_rel_growth_enterobact
-0.169142352
log_rel_growth_enterococcus
0.306134975
log_rel_growth_mesophiles
-0.21524336
log_rel_growth_staphylococcus
0
log_staphylococcus_density
0
longitude
-2.992936111
mesophiles_density
7520068.285
nest_type
open
number_fledging
Missing: Not provided
number_sampled_eggs
6
observer
Juan
physical_location_1
U Granada
physical_specimen_location
CCME
physical_specimen_remaining
TRUE
plants
TRUE
platero_plates
P9D08
predated
egg phase
public
TRUE
rel_growth_enterobacteriaceae
-0.322580572
rel_growth_enterococcus
1.023648013
rel_growth_staphylococcus
0
relative_growth_mesophiles
-0.390804566
required_sample_info_status
completed
sample name
qiita_sid_1632:1632.E3F05.Knight16sV4.JuannaBirdEMP.NoIndex.L005.R1.001.sequences
sample type
bird egg shell
sample_nest
Alcaudon.Alcaudon5.2
sample_progress
sequenced (16S)
sampling time
2
sampling_code_id
261
species name
Lanius meridionalis
staphylococcus_density
0
storing_days
1
unhatched_eggs
Missing: Not provided
year
2007