1632.E5H07.Knight16sV4.JuannaBirdEMP.NoIndex.L005.R1.001.sequences; Bird Egg Shells from Spain
bird metagenome
Bird Egg Shells from nest Autillo.TG8.1
ENA first public
2016-07-13
ENA last update
2016-07-13
External Id
SAMEA4076560
INSDC center alias
UCSDMI
INSDC center name
University of California San Diego Microbiome Initiative
INSDC first public
2016-07-13T17:01:27Z
INSDC last update
2016-07-13T01:15:13Z
INSDC status
public
Submitter Id
qiita_sid_1632:1632.E5H07.Knight16sV4.JuannaBirdEMP.NoIndex.L005.R1.001.sequences
altitude
0
anonymized name
E5H07
arcsine_fledge_success_brood
Missing: Not collected
arcsine_fledge_success_clutch
Missing: Not collected
arcsine_hatching_success
1.047197551
area
Torre Guajar
assigned_from_geo
TRUE
backup
TRUE
bird_family
Strigidae
bird_order
Strigiformes
broken_eggs
0
brood_size
3
clutch_size
4
code_id_statistica
95
coll_date_juliane_days
147
collection date
5/28/07 0:00
collection_timestamp
5/28/07
common name
organismal metagenome
country
GAZ:Spain
country_nation
Spain
country_region
Hoya de Guadix
culturing_date
6/13/07
depth
0
dna_extracted
TRUE
elevation
1039
empo_0
EMP sample
empo_1
Host-associated
empo_2
Animal
empo_3
Animal surface
enterobacteriaceae_density
2310239759
enterococcus_density
17926450.59
env biome
mediterranean shrubland biome
env feature
nest of bird
env matter
egg
env package
host-associated
eppendorf_name
TG 8.1
estefania_plates
5H07
extracted DNA avail now
TRUE
feathers
FALSE
fledge_success_brood
Missing: Not collected
fledge_success_clutch
Missing: Not collected
fledging_date
Missing: Not collected
geo loc name
Spain:Hoya de Guadix
hatching_date
6/11/07
hatching_success
0.75
hatching_synchrony
asyn
host common name
Eurasian scops-owl
host scientific name
Strigiformes
host subject id
Autillo.TG8.1
host taxid
126827
latitude
37.38953889
lay_date_juliane_days
132
laying_date
8/11/07
log_enterobacteriaceae_density
9.363657054
log_enterococcus_density
7.253494333
log_mesophiles_density
6.998833099
log_rel_growth_enterobact
-2.920028253
log_rel_growth_enterococcus
-3.380094994
log_rel_growth_mesophiles
0.031791831
log_rel_growth_staphylococcus
0
log_staphylococcus_density
0
longitude
-3.098552778
mesophiles_density
9973166.172
nest_type
hole
number_fledging
Missing: Not provided
number_sampled_eggs
4
observer
Juanma
physical_specimen_location
CCME
physical_specimen_remaining
TRUE
plants
FALSE
platero_plates
P5B05
public
TRUE
rel_growth_enterobacteriaceae
-0.998797814
rel_growth_enterococcus
-0.999583222
rel_growth_staphylococcus
0
relative_growth_mesophiles
0.075949359
required_sample_info_status
completed
sample name
qiita_sid_1632:1632.E5H07.Knight16sV4.JuannaBirdEMP.NoIndex.L005.R1.001.sequences
sample type
bird egg shell
sample_nest
Autillo.TG8.1
sample_progress
sequenced (16S)
sampling time
1
sampling_code_id
499
species name
Otus scops
staphylococcus_density
0
storing_days
16
unhatched_eggs
1
year
2007