Bird Egg Shells from Spain; 1632.E2E10.Knight16sV4.JuannaBirdEMP.NoIndex.L005.R1.001.sequences
bird metagenome
Bird Egg Shells from nest Abubilla.20a.1
ENA first public
2016-07-13
ENA last update
2016-07-13
External Id
SAMEA4076198
INSDC center alias
UCSDMI
INSDC center name
University of California San Diego Microbiome Initiative
INSDC first public
2016-07-13T17:01:27Z
INSDC last update
2016-07-13T01:15:01Z
INSDC status
public
Submitter Id
qiita_sid_1632:1632.E2E10.Knight16sV4.JuannaBirdEMP.NoIndex.L005.R1.001.sequences
abandoned
No
altitude
0
anonymized name
E2E10
arcsine_fledge_success_brood
0.100167421
arcsine_fledge_success_clutch
0.094421141
arcsine_hatching_success
1.231136233
area
Cortijo Perro
assigned_from_geo
TRUE
backup
FALSE
bird_family
Upuidae
bird_order
Upupiformes
broken_eggs
0
brood_size
8
clutch_size
9
code_id_statistica
10
coll_date_juliane_days
120
collection date
5/1/07 0:00
collection_timestamp
5/1/07
common name
organismal metagenome
country
GAZ:Spain
country_nation
Spain
country_region
Hoya de Guadix
culturing_date
5/4/07
depth
0
dna_extracted
TRUE
elevation
1160
empo_0
EMP sample
empo_1
Host-associated
empo_2
Animal
empo_3
Animal surface
enterobacteriaceae_density
39403287.32
enterococcus_density
130684.2695
env biome
mediterranean shrubland biome
env feature
nest of bird
env matter
egg
env package
host-associated
eppendorf_name
20.1
estefania_plates
2.00E+10
extracted DNA avail now
TRUE
feathers
FALSE
fledge_success_brood
1
fledge_success_clutch
0.888888889
fledging_date
5/28/07
geo loc name
Spain:Hoya de Guadix
hatching_date
5/8/07
hatching_success
0.889
hatching_synchrony
asyn
host common name
Eurasian hoopoe
host scientific name
Upupiformes
host subject id
Abubilla.20a.1
host taxid
57439
latitude
37.32654722
lay_date_juliane_days
101
laying_date
7/11/07
log_enterobacteriaceae_density
7.595532467
log_enterococcus_density
5.116226638
log_mesophiles_density
6.870710705
log_rel_growth_enterobact
-0.875607131
log_rel_growth_enterococcus
-0.382838613
log_rel_growth_mesophiles
-0.126873217
log_rel_growth_staphylococcus
-2.392439077
log_staphylococcus_density
3.597873297
longitude
-3.059219444
mesophiles_density
7425242.586
nest_type
hole
number_fledging
8
number_sampled_eggs
9
observer
Manolo
physical_location_1
U Granada
physical_specimen_location
CCME
physical_specimen_remaining
TRUE
plants
FALSE
platero_plates
P2E7
predated
No
public
TRUE
rel_growth_enterobacteriaceae
-0.866834149
rel_growth_enterococcus
-0.585846451
rel_growth_staphylococcus
-0.995949012
relative_growth_mesophiles
-0.253333299
required_sample_info_status
completed
sample name
qiita_sid_1632:1632.E2E10.Knight16sV4.JuannaBirdEMP.NoIndex.L005.R1.001.sequences
sample type
bird egg shell
sample_nest
Abubilla.20a.1
sample_progress
sequenced (16S)
sampling time
1
sampling_code_id
167
species name
Upupa epops
staphylococcus_density
3960.624395
storing_days
3
unhatched_eggs
1
year
2007