1632.E4E06.Knight16sV4.JuannaBirdEMP.NoIndex.L005.R1.001.sequences; Bird Egg Shells from Spain
bird metagenome
Bird Egg Shells from nest Carbonero.CA45.2
ENA first public
2016-07-13
ENA last update
2016-07-13
External Id
SAMEA4076416
INSDC center alias
UCSDMI
INSDC center name
University of California San Diego Microbiome Initiative
INSDC first public
2016-07-13T17:01:27Z
INSDC last update
2016-07-13T01:15:08Z
INSDC status
public
Submitter Id
qiita_sid_1632:1632.E4E06.Knight16sV4.JuannaBirdEMP.NoIndex.L005.R1.001.sequences
abandoned
No
altitude
0
anonymized name
E4E06
arcsine_fledge_success_brood
0.100167421
arcsine_fledge_success_clutch
0.100167421
arcsine_hatching_success
1.570796327
area
Cortijo Conejo
assigned_from_geo
TRUE
backup
TRUE
bird_family
Paridae
bird_order
Passeriformes
broken_eggs
0
brood_size
11
clutch_size
11
code_id_statistica
127
coll_date_juliane_days
138
collection date
5/19/07 0:00
collection_timestamp
5/19/07
common name
organismal metagenome
country
GAZ:Spain
country_nation
Spain
country_region
Hoya de Guadix
culturing_date
5/29/07
depth
0
dna_extracted
TRUE
elevation
1055
empo_0
EMP sample
empo_1
Host-associated
empo_2
Animal
empo_3
Animal surface
enterobacteriaceae_density
0
enterococcus_density
6791.460267
env biome
mediterranean shrubland biome
env feature
nest of bird
env matter
egg
env package
host-associated
eppendorf_name
CA45.2
estefania_plates
4.00E+06
extracted DNA avail now
TRUE
feathers
TRUE
fledge_success_brood
1
fledge_success_clutch
1
fledging_date
6/6/07
geo loc name
Spain:Hoya de Guadix
hatching_date
5/24/07
hatching_success
1
hatching_synchrony
asyn
host common name
Great tit
host scientific name
Passeriformes
host subject id
Carbonero.CA45.2
host taxid
9157
latitude
37.40583611
lay_date_juliane_days
115
laying_date
7/25/07
log_enterobacteriaceae_density
0
log_enterococcus_density
3.832027107
log_mesophiles_density
6.796360956
log_rel_growth_enterobact
-6.485111868
log_rel_growth_enterococcus
2.824829099
log_rel_growth_mesophiles
0.05368485
log_rel_growth_staphylococcus
0
log_staphylococcus_density
0
longitude
-3.082122222
mesophiles_density
6256924.104
nest_type
hole
number_fledging
11
number_sampled_eggs
11
observer
Juanma
physical_specimen_location
CCME
physical_specimen_remaining
TRUE
plants
FALSE
platero_plates
P4A02
predated
No
public
TRUE
rel_growth_enterobacteriaceae
-0.999999673
rel_growth_enterococcus
667.0809667
rel_growth_staphylococcus
0
relative_growth_mesophiles
0.131578924
required_sample_info_status
completed
sample name
qiita_sid_1632:1632.E4E06.Knight16sV4.JuannaBirdEMP.NoIndex.L005.R1.001.sequences
sample type
bird egg shell
sample_nest
Carbonero.CA45.2
sample_progress
sequenced (16S)
sampling time
2
sampling_code_id
430
species name
Parus major
staphylococcus_density
0
storing_days
10
unhatched_eggs
0
year
2007