1632.E4E03.Knight16sV4.JuannaBirdEMP.NoIndex.L005.R1.001.sequences; Bird Egg Shells from Spain
bird metagenome
Bird Egg Shells from nest Jilguero.J18.1
ENA first public
2016-07-13
ENA last update
2016-07-13
External Id
SAMEA4076412
INSDC center alias
UCSDMI
INSDC center name
University of California San Diego Microbiome Initiative
INSDC first public
2016-07-13T17:01:26Z
INSDC last update
2016-07-13T01:15:08Z
INSDC status
public
Submitter Id
qiita_sid_1632:1632.E4E03.Knight16sV4.JuannaBirdEMP.NoIndex.L005.R1.001.sequences
altitude
0
anonymized name
E4E03
arcsine_fledge_success_brood
Missing: Not collected
arcsine_fledge_success_clutch
Missing: Not collected
arcsine_hatching_success
Missing: Not collected
area
GuejarSierra
assigned_from_geo
TRUE
backup
FALSE
bird_family
Fringillidae
bird_order
Passeriformes
broken_eggs
Missing: Not collected
brood_size
Missing: Not collected
clutch_size
5
code_id_statistica
367
coll_date_juliane_days
140
collection date
5/21/07 0:00
collection_timestamp
5/21/07
comments_in_spanish
Tama_o de los huevos estimado
common name
organismal metagenome
country
GAZ:Spain
country_nation
Spain
country_region
Hoya de Guadix
culturing_date
5/29/07
depth
0
dna_extracted
TRUE
elevation
1175
empo_0
EMP sample
empo_1
Host-associated
empo_2
Animal
empo_3
Animal surface
enterobacteriaceae_density
9387663.866
enterococcus_density
1.043073763
env biome
mediterranean shrubland biome
env feature
nest of bird
env matter
egg
env package
host-associated
eppendorf_name
J 1B.1
estefania_plates
4.00E+03
extracted DNA avail now
TRUE
feathers
TRUE
fledge_success_brood
Missing: Not collected
fledge_success_clutch
Missing: Not collected
fledging_date
Missing: Not collected
geo loc name
Spain:Hoya de Guadix
hatching_date
Missing: Not collected
hatching_success
Missing: Not collected
hatching_synchrony
asyn
host common name
Eurasian goldfinch
host scientific name
Passeriformes
host subject id
Jilguero.J18.1
host taxid
37600
latitude
37.14837778
lay_date_juliane_days
Missing: Not provided
laying_date
Missing: Not provided
log_enterobacteriaceae_density
6.972557577
log_enterococcus_density
0.310284047
log_mesophiles_density
7.465473068
log_rel_growth_enterobact
Missing: Not provided
log_rel_growth_enterococcus
Missing: Not provided
log_rel_growth_mesophiles
Missing: Not provided
log_rel_growth_staphylococcus
Missing: Not provided
log_staphylococcus_density
0
longitude
-3.411569444
mesophiles_density
29206065.36
nest_type
open
number_fledging
Missing: Not provided
number_sampled_eggs
5
observer
Juanma
physical_specimen_location
CCME
physical_specimen_remaining
TRUE
plants
TRUE
platero_plates
P3G01
public
TRUE
required_sample_info_status
completed
sample name
qiita_sid_1632:1632.E4E03.Knight16sV4.JuannaBirdEMP.NoIndex.L005.R1.001.sequences
sample type
bird egg shell
sample_nest
Jilguero.J18.1
sample_progress
sequenced (16S)
sampling time
1
sampling_code_id
462
species name
Carduelis carduelis
staphylococcus_density
0
storing_days
8
unhatched_eggs
Missing: Not provided
year
2007