1632.E2C04.Knight16sV4.JuannaBirdEMP.NoIndex.L005.R1.001.sequences; Bird Egg Shells from Spain
bird metagenome
Bird Egg Shells from nest Palomabravia.PalPer9.1
ENA first public
2016-07-13
ENA last update
2016-07-13
External Id
SAMEA4076163
INSDC center alias
UCSDMI
INSDC center name
University of California San Diego Microbiome Initiative
INSDC first public
2016-07-13T17:01:27Z
INSDC last update
2016-07-13T01:15:00Z
INSDC status
public
Submitter Id
qiita_sid_1632:1632.E2C04.Knight16sV4.JuannaBirdEMP.NoIndex.L005.R1.001.sequences
abandoned
No
altitude
0
anonymized name
E2C04
arcsine_fledge_success_brood
0.100167421
arcsine_fledge_success_clutch
0.100167421
arcsine_hatching_success
1.570796327
area
Cortijo Perro
assigned_from_geo
TRUE
backup
FALSE
bird_family
Columbiadae
bird_order
Columbiformes
broken_eggs
0
brood_size
2
clutch_size
2
code_id_statistica
454
coll_date_juliane_days
113
collection date
4/24/07 0:00
collection_timestamp
4/24/07
common name
organismal metagenome
country
GAZ:Spain
country_nation
Spain
country_region
Hoya de Guadix
culturing_date
5/1/07
depth
0
dna_extracted
TRUE
elevation
1160
empo_0
EMP sample
empo_1
Host-associated
empo_2
Animal
empo_3
Animal surface
enterobacteriaceae_density
248709.4935
enterococcus_density
36574.92552
env biome
mediterranean shrubland biome
env feature
nest of bird
env matter
egg
env package
host-associated
eppendorf_name
PAL PER 9.1
estefania_plates
2C04
extracted DNA avail now
TRUE
feathers
FALSE
fledge_success_brood
1
fledge_success_clutch
1
fledging_date
6/5/07
geo loc name
Spain:Hoya de Guadix
hatching_date
5/11/07
hatching_success
1
hatching_synchrony
asyn
host common name
Rock pigeon
host scientific name
Columbiformes
host subject id
Palomabravia.PalPer9.1
host taxid
8932
latitude
37.32654722
lay_date_juliane_days
110
laying_date
7/20/07
log_enterobacteriaceae_density
5.395694109
log_enterococcus_density
4.563195324
log_mesophiles_density
8.165243445
log_rel_growth_enterobact
Missing: Not provided
log_rel_growth_enterococcus
Missing: Not provided
log_rel_growth_mesophiles
Missing: Not provided
log_rel_growth_staphylococcus
Missing: Not provided
log_staphylococcus_density
2.694395893
longitude
-3.059219444
mesophiles_density
146299702.1
nest_type
hole
number_fledging
2
number_sampled_eggs
2
observer
Juanma
physical_location_1
U Granada
physical_specimen_location
CCME
physical_specimen_remaining
TRUE
plants
FALSE
predated
No
public
TRUE
required_sample_info_status
completed
sample name
qiita_sid_1632:1632.E2C04.Knight16sV4.JuannaBirdEMP.NoIndex.L005.R1.001.sequences
sample type
bird egg shell
sample_nest
Palomabravia.PalPer9.1
sample_progress
sequenced (16S)
sampling time
1
sampling_code_id
116
species name
Columba livia
staphylococcus_density
493.7614945
storing_days
7
unhatched_eggs
0
year
2007