1632.E3B01.Knight16sV4.JuannaBirdEMP.NoIndex.L005.R1.001.sequences; Bird Egg Shells from Spain
bird metagenome
Bird Egg Shells from nest Estornino.E84.1
ENA first public
2016-07-13
ENA last update
2016-07-13
External Id
SAMEA4076252
INSDC center alias
UCSDMI
INSDC center name
University of California San Diego Microbiome Initiative
INSDC first public
2016-07-13T17:01:27Z
INSDC last update
2016-07-13T01:15:03Z
INSDC status
public
Submitter Id
qiita_sid_1632:1632.E3B01.Knight16sV4.JuannaBirdEMP.NoIndex.L005.R1.001.sequences
altitude
0
anonymized name
E3B01
arcsine_fledge_success_brood
Missing: Not collected
arcsine_fledge_success_clutch
Missing: Not collected
arcsine_hatching_success
0.886077124
area
Calahorra
assigned_from_geo
TRUE
backup
FALSE
bird_family
Sturnidae
bird_order
Passeriformes
broken_eggs
0
brood_size
3
clutch_size
5
code_id_statistica
289
coll_date_juliane_days
122
collection date
5/3/07 0:00
collection_timestamp
5/3/07
common name
organismal metagenome
country
GAZ:Spain
country_nation
Spain
country_region
Hoya de Guadix
culturing_date
5/5/07
depth
0
dna_extracted
TRUE
elevation
1106
empo_0
EMP sample
empo_1
Host-associated
empo_2
Animal
empo_3
Animal surface
enterobacteriaceae_density
0
enterococcus_density
26993.96791
env biome
mediterranean shrubland biome
env feature
nest of bird
env matter
egg
env package
host-associated
eppendorf_name
StE 84 (03/05)
estefania_plates
3B01
extracted DNA avail now
TRUE
feathers
TRUE
fledge_success_brood
Missing: Not collected
fledge_success_clutch
Missing: Not collected
fledging_date
Missing: Not collected
geo loc name
Spain:Hoya de Guadix
hatching_date
5/13/07
hatching_success
0.6
hatching_synchrony
syn
host common name
Sptoless starling
host scientific name
Passeriformes
host subject id
Estornino.E84.1
host taxid
381112
latitude
37.25371111
lay_date_juliane_days
116
laying_date
7/26/07
log_enterobacteriaceae_density
0
log_enterococcus_density
4.431282816
log_mesophiles_density
0
log_rel_growth_enterobact
6.259053362
log_rel_growth_enterococcus
0.104002044
log_rel_growth_mesophiles
6.522294688
log_rel_growth_staphylococcus
0.741696193
log_staphylococcus_density
1.962780644
longitude
-3.029825
mesophiles_density
0
nest_type
hole
number_fledging
Missing: Not provided
number_sampled_eggs
5
observer
Carlos
physical_location_1
U Granada
physical_specimen_location
CCME
physical_specimen_remaining
TRUE
plants
TRUE
platero_plates
P2G03
public
TRUE
rel_growth_enterobacteriaceae
1815737.752
rel_growth_enterococcus
0.270580086
rel_growth_staphylococcus
4.516913736
relative_growth_mesophiles
3328852.545
required_sample_info_status
completed
sample name
qiita_sid_1632:1632.E3B01.Knight16sV4.JuannaBirdEMP.NoIndex.L005.R1.001.sequences
sample type
bird egg shell
sample_nest
Estornino.E84.1
sample_progress
sequenced (16S)
sampling time
1
sampling_code_id
204
species name
Sturnus unicolor
staphylococcus_density
90.78688759
storing_days
2
unhatched_eggs
2
year
2007