1632.E5D04.Knight16sV4.JuannaBirdEMP.NoIndex.L005.R1.001.sequences; Bird Egg Shells from Spain
bird metagenome
Bird Egg Shells from nest Golondrinacomun.GolHv6.2
ENA first public
2016-07-13
ENA last update
2016-07-13
External Id
SAMEA4076505
INSDC center alias
UCSDMI
INSDC center name
University of California San Diego Microbiome Initiative
INSDC first public
2016-07-13T17:01:27Z
INSDC last update
2016-07-13T01:15:11Z
INSDC status
public
Submitter Id
qiita_sid_1632:1632.E5D04.Knight16sV4.JuannaBirdEMP.NoIndex.L005.R1.001.sequences
altitude
0
anonymized name
E5D04
arcsine_fledge_success_brood
Missing: Not collected
arcsine_fledge_success_clutch
Missing: Not collected
arcsine_hatching_success
Missing: Not collected
area
Hernan-Valle
assigned_from_geo
TRUE
backup
TRUE
bird_family
Hirundinidae
bird_order
Passeriformes
broken_eggs
0
brood_size
4
clutch_size
5
code_id_statistica
316
coll_date_juliane_days
143
collection date
5/24/07 0:00
collection_timestamp
5/24/07
comments_in_spanish
Sin datos de los pollos
common name
organismal metagenome
country
GAZ:Spain
country_nation
Spain
country_region
Hoya de Guadix
culturing_date
5/29/07
depth
0
dna_extracted
TRUE
elevation
1134
empo_0
EMP sample
empo_1
Host-associated
empo_2
Animal
empo_3
Animal surface
enterobacteriaceae_density
1217763.869
enterococcus_density
1
env biome
mediterranean shrubland biome
env feature
nest of bird
env matter
egg
env package
host-associated
eppendorf_name
GOL HV 1c.1
estefania_plates
5D04
extracted DNA avail now
TRUE
feathers
TRUE
fledge_success_brood
Missing: Not collected
fledge_success_clutch
Missing: Not collected
fledging_date
Missing: Not collected
geo loc name
Spain:Hoya de Guadix
hatching_date
5/29/07
hatching_success
Missing: Not collected
hatching_synchrony
syn
host common name
Barn swallow
host scientific name
Passeriformes
host subject id
Golondrinacomun.GolHv6.2
host taxid
43150
latitude
37.37229722
lay_date_juliane_days
128
laying_date
8/7/07
log_enterobacteriaceae_density
6.085563441
log_enterococcus_density
0.301029996
log_mesophiles_density
6.738775677
log_rel_growth_enterobact
Missing: Not provided
log_rel_growth_enterococcus
Missing: Not provided
log_rel_growth_mesophiles
Missing: Not provided
log_rel_growth_staphylococcus
Missing: Not provided
log_staphylococcus_density
0
longitude
-3.066655556
mesophiles_density
5479937.409
nest_type
hole
number_fledging
Missing: Not provided
number_sampled_eggs
5
observer
Juanma
physical_specimen_location
CCME
physical_specimen_remaining
TRUE
plants
FALSE
platero_plates
P4G011
public
TRUE
required_sample_info_status
completed
sample name
qiita_sid_1632:1632.E5D04.Knight16sV4.JuannaBirdEMP.NoIndex.L005.R1.001.sequences
sample type
bird egg shell
sample_nest
Golondrinacomun.GolHv6.2
sample_progress
sequenced (16S)
sampling time
2
sampling_code_id
472
species name
Hirundo rustica
staphylococcus_density
0
storing_days
5
unhatched_eggs
1
year
2007