Bird Egg Shells from Spain; 1632.E5A03.Knight16sV4.JuannaBirdEMP.NoIndex.L005.R1.001.sequences
bird metagenome
Bird Egg Shells from nest Urraca.UCON20.1
ENA first public
2016-07-13
ENA last update
2016-07-13
External Id
SAMEA4076464
INSDC center alias
UCSDMI
INSDC center name
University of California San Diego Microbiome Initiative
INSDC first public
2016-07-13T17:01:27Z
INSDC last update
2016-07-13T01:15:10Z
INSDC status
public
Submitter Id
qiita_sid_1632:1632.E5A03.Knight16sV4.JuannaBirdEMP.NoIndex.L005.R1.001.sequences
altitude
0
anonymized name
E5A03
arcsine_fledge_success_brood
Missing: Not collected
arcsine_fledge_success_clutch
Missing: Not collected
arcsine_hatching_success
1.149814957
area
Cortijo Conejo
assigned_from_geo
TRUE
backup
TRUE
bird_family
Corvidae
bird_order
Passeriformes
broken_eggs
0
brood_size
5
clutch_size
6
code_id_statistica
557
coll_date_juliane_days
136
collection date
5/17/07 0:00
collection_timestamp
5/17/07
comments_in_spanish
Sin datos de los pollos
common name
organismal metagenome
country
GAZ:Spain
country_nation
Spain
country_region
Hoya de Guadix
culturing_date
5/24/07
depth
0
dna_extracted
TRUE
elevation
1055
empo_0
EMP sample
empo_1
Host-associated
empo_2
Animal
empo_3
Animal surface
enterobacteriaceae_density
0
enterococcus_density
0
env biome
mediterranean shrubland biome
env feature
nest of bird
env matter
egg
env package
host-associated
eppendorf_name
UCON 20.1
estefania_plates
5A03
extracted DNA avail now
TRUE
feathers
FALSE
fledge_success_brood
Missing: Not collected
fledge_success_clutch
Missing: Not collected
fledging_date
Missing: Not collected
geo loc name
Spain:Hoya de Guadix
hatching_date
5/31/07
hatching_success
0.833
hatching_synchrony
asyn
host common name
Black-billed Magpie
host scientific name
Passeriformes
host subject id
Urraca.UCON20.1
host taxid
34924
latitude
37.40583611
lay_date_juliane_days
126
laying_date
8/5/07
log_enterobacteriaceae_density
0
log_enterococcus_density
0
log_mesophiles_density
0.547614217
log_rel_growth_enterobact
5.190266389
log_rel_growth_enterococcus
6.027801999
log_rel_growth_mesophiles
6.618682243
log_rel_growth_staphylococcus
0
log_staphylococcus_density
0
longitude
-3.082122222
mesophiles_density
2.528695775
nest_type
open
number_fledging
Missing: Not provided
number_sampled_eggs
6
observer
Juanma
physical_specimen_location
CCME
physical_specimen_remaining
TRUE
plants
TRUE
platero_plates
P4F012
public
TRUE
rel_growth_enterobacteriaceae
154975.693
rel_growth_enterococcus
1066108.955
rel_growth_staphylococcus
0
relative_growth_mesophiles
4156063.159
required_sample_info_status
completed
sample name
qiita_sid_1632:1632.E5A03.Knight16sV4.JuannaBirdEMP.NoIndex.L005.R1.001.sequences
sample type
bird egg shell
sample_nest
Urraca.UCON20.1
sample_progress
sequenced (16S)
sampling time
1
sampling_code_id
397
species name
Pica pica
staphylococcus_density
0
storing_days
7
unhatched_eggs
1
year
2007