1632.E2G07.r.EMPbird.v4.NoIndex.L001; Bird Egg Shells from Spain
bird metagenome
Bird Egg Shells from nest Alcaudon.Alcaudon2.1
ENA first public
2016-07-13
ENA last update
2016-07-13
External Id
SAMEA4076221
INSDC center alias
UCSDMI
INSDC center name
University of California San Diego Microbiome Initiative
INSDC first public
2016-07-13T17:01:27Z
INSDC last update
2016-07-13T01:15:02Z
INSDC status
public
Submitter Id
qiita_sid_1632:1632.E2G07.r.EMPbird.v4.NoIndex.L001
altitude
0
anonymized name
E2G07
arcsine_fledge_success_brood
Missing: Not collected
arcsine_fledge_success_clutch
Missing: Not collected
arcsine_hatching_success
1.150261992
area
Dolar
assigned_from_geo
TRUE
backup
FALSE
bird_family
Laniidae
bird_order
Passeriformes
broken_eggs
0
brood_size
5
clutch_size
6
code_id_statistica
58
coll_date_juliane_days
119
collection date
4/30/07 0:00
collection_timestamp
4/30/07
common name
organismal metagenome
country
GAZ:Spain
country_nation
Spain
country_region
Hoya de Guadix
culturing_date
5/4/07
depth
0
dna_extracted
TRUE
elevation
1154
empo_0
EMP sample
empo_1
Host-associated
empo_2
Animal
empo_3
Animal surface
enterobacteriaceae_density
5703965.945
enterococcus_density
21.2948062
env biome
mediterranean shrubland biome
env feature
nest of bird
env matter
egg
env package
host-associated
eppendorf_name
Alcauda_n 2
estefania_plates
2G07
extracted DNA avail now
TRUE
feathers
TRUE
fledge_success_brood
Missing: Not collected
fledge_success_clutch
Missing: Not collected
fledging_date
Missing: Not collected
geo loc name
Spain:Hoya de Guadix
hatching_date
5/15/07
hatching_success
0.833333333
hatching_synchrony
asyn
host common name
Southern grey shrike
host scientific name
Passeriformes
host subject id
Alcaudon.Alcaudon2.1
host taxid
219215
latitude
37.19090278
lay_date_juliane_days
111
laying_date
7/21/07
log_enterobacteriaceae_density
6.756177
log_enterococcus_density
1.348203701
log_mesophiles_density
7.098599639
log_rel_growth_enterobact
-0.062147895
log_rel_growth_enterococcus
-1.042610356
log_rel_growth_mesophiles
-0.203243484
log_rel_growth_staphylococcus
-0.098127664
log_staphylococcus_density
0.098127664
longitude
-2.992936111
mesophiles_density
12548725.08
nest_type
open
number_fledging
Missing: Not provided
number_sampled_eggs
6
observer
Juan
physical_location_1
U Granada
physical_specimen_location
CCME
physical_specimen_remaining
TRUE
plants
TRUE
platero_plates
P2C010
public
TRUE
rel_growth_enterobacteriaceae
-0.13333331
rel_growth_enterococcus
-0.909345442
rel_growth_staphylococcus
-0.202239854
relative_growth_mesophiles
-0.373737344
required_sample_info_status
completed
sample name
qiita_sid_1632:1632.E2G07.r.EMPbird.v4.NoIndex.L001
sample type
bird egg shell
sample_nest
Alcaudon.Alcaudon2.1
sample_progress
sequenced (16S)
sampling time
1
sampling_code_id
178
species name
Lanius meridionalis
staphylococcus_density
0.253509598
storing_days
4
unhatched_eggs
1
year
2007