Bird Egg Shells from Spain; 1632.E4E07.Knight16sV4.JuannaBirdEMP.NoIndex.L005.R1.001.sequences
bird metagenome
Bird Egg Shells from nest Mirlo.46.2
ENA first public
2016-07-13
ENA last update
2016-07-13
External Id
SAMEA4076417
INSDC center alias
UCSDMI
INSDC center name
University of California San Diego Microbiome Initiative
INSDC first public
2016-07-13T17:01:27Z
INSDC last update
2016-07-13T01:15:08Z
INSDC status
public
Submitter Id
qiita_sid_1632:1632.E4E07.Knight16sV4.JuannaBirdEMP.NoIndex.L005.R1.001.sequences
altitude
0
anonymized name
E4E07
arcsine_fledge_success_brood
Missing: Not collected
arcsine_fledge_success_clutch
Missing: Not collected
arcsine_hatching_success
0.955316618
area
Granada
assigned_from_geo
TRUE
backup
TRUE
bird_family
Turdidae
bird_order
Passeriformes
broken_eggs
0
brood_size
2
clutch_size
3
code_id_statistica
372
coll_date_juliane_days
Missing: Not collected
collection date
4/23/07 0:00
collection_timestamp
4/23/07
common name
organismal metagenome
country
GAZ:Spain
country_nation
Spain
country_region
Hoya de Guadix
culturing_date
5/25/07
depth
0
dna_extracted
TRUE
elevation
689
empo_0
EMP sample
empo_1
Host-associated
empo_2
Animal
empo_3
Animal surface
enterobacteriaceae_density
62345.71383
enterococcus_density
1.021647817
env biome
mediterranean shrubland biome
env feature
nest of bird
env matter
egg
env package
host-associated
eppendorf_name
46.2
estefania_plates
4.00E+07
extracted DNA avail now
TRUE
feathers
FALSE
fledge_success_brood
Missing: Not collected
fledge_success_clutch
Missing: Not collected
fledging_date
Missing: Not collected
geo loc name
Spain:Hoya de Guadix
hatching_date
4/28/07
hatching_success
0.666666667
hatching_synchrony
asyn
host common name
Blackbird
host scientific name
Passeriformes
host subject id
Mirlo.46.2
host taxid
9187
latitude
37.17907778
lay_date_juliane_days
Missing: Not provided
laying_date
Missing: Not provided
log_enterobacteriaceae_density
4.794813568
log_enterococcus_density
0.305705501
log_mesophiles_density
6.669867958
log_rel_growth_enterobact
4.271331884
log_rel_growth_enterococcus
0.305705501
log_rel_growth_mesophiles
0.778150786
log_rel_growth_staphylococcus
0.523481683
log_staphylococcus_density
0.523481683
longitude
-3.611505556
mesophiles_density
4675928.537
nest_type
open
number_fledging
Missing: Not provided
number_sampled_eggs
3
observer
Juandiego
physical_specimen_location
CCME
physical_specimen_remaining
TRUE
plants
TRUE
platero_plates
P4A010
public
TRUE
rel_growth_enterobacteriaceae
18677.06508
rel_growth_enterococcus
1.021647817
rel_growth_staphylococcus
2.337964268
relative_growth_mesophiles
4.999993584
required_sample_info_status
completed
sample name
qiita_sid_1632:1632.E4E07.Knight16sV4.JuannaBirdEMP.NoIndex.L005.R1.001.sequences
sample type
bird egg shell
sample_nest
Mirlo.46.2
sample_progress
sequenced (16S)
sampling time
2
sampling_code_id
418
species name
Turdus merula
staphylococcus_density
2.337964268
storing_days
32
unhatched_eggs
1
year
2007