1632.E5C10.Knight16sV4.JuannaBirdEMP.NoIndex.L005.R1.001.sequences; Bird Egg Shells from Spain
bird metagenome
Bird Egg Shells from nest Gorrionmolinero.GORMOL19.1
ENA first public
2016-07-13
ENA last update
2016-07-13
External Id
SAMEA4076498
INSDC center alias
UCSDMI
INSDC center name
University of California San Diego Microbiome Initiative
INSDC first public
2016-07-13T17:01:27Z
INSDC last update
2016-07-13T01:15:11Z
INSDC status
public
Submitter Id
qiita_sid_1632:1632.E5C10.Knight16sV4.JuannaBirdEMP.NoIndex.L005.R1.001.sequences
abandoned
egg phase
altitude
0
anonymized name
E5C10
arcsine_fledge_success_brood
Missing: Not collected
arcsine_fledge_success_clutch
Missing: Not collected
arcsine_hatching_success
Missing: Not collected
area
Hernan-Valle
assigned_from_geo
TRUE
backup
TRUE
bird_family
Passeridae
bird_order
Passeriformes
broken_eggs
Missing: Not collected
brood_size
Missing: Not collected
clutch_size
2
code_id_statistica
349
coll_date_juliane_days
153
collection date
6/3/07 0:00
collection_timestamp
6/3/07
comments_in_spanish
Abandonados
common name
organismal metagenome
country
GAZ:Spain
country_nation
Spain
country_region
Hoya de Guadix
culturing_date
6/20/07
depth
0
dna_extracted
TRUE
elevation
1134
empo_0
EMP sample
empo_1
Host-associated
empo_2
Animal
empo_3
Animal surface
enterobacteriaceae_density
62012.65218
enterococcus_density
0
env biome
mediterranean shrubland biome
env feature
nest of bird
env matter
egg
env package
host-associated
eppendorf_name
G19.1.1
estefania_plates
5C10
extracted DNA avail now
TRUE
feathers
TRUE
fledge_success_brood
Missing: Not collected
fledge_success_clutch
Missing: Not collected
fledging_date
Missing: Not collected
geo loc name
Spain:Hoya de Guadix
hatching_date
Missing: Not collected
hatching_success
Missing: Not collected
hatching_synchrony
syn
host common name
Eurasian tree sparrow
host scientific name
Passeriformes
host subject id
Gorrionmolinero.GORMOL19.1
host taxid
9160
latitude
37.37229722
lay_date_juliane_days
112
laying_date
7/22/07
log_enterobacteriaceae_density
4.792487309
log_enterococcus_density
0
log_mesophiles_density
7.366511592
log_rel_growth_enterobact
Missing: Not provided
log_rel_growth_enterococcus
Missing: Not provided
log_rel_growth_mesophiles
Missing: Not provided
log_rel_growth_staphylococcus
Missing: Not provided
log_staphylococcus_density
0.942086543
longitude
-3.066655556
mesophiles_density
23254744.57
nest_type
hole
number_fledging
Missing: Not provided
number_sampled_eggs
2
observer
Juanma
physical_specimen_location
CCME
physical_specimen_remaining
TRUE
plants
TRUE
platero_plates
P5C012
predated
No
public
TRUE
required_sample_info_status
completed
sample name
qiita_sid_1632:1632.E5C10.Knight16sV4.JuannaBirdEMP.NoIndex.L005.R1.001.sequences
sample type
bird egg shell
sample_nest
Gorrionmolinero.GORMOL19.1
sample_progress
sequenced (16S)
sampling time
1
sampling_code_id
531
species name
Passer montanus
staphylococcus_density
7.751581523
storing_days
17
unhatched_eggs
Missing: Not provided
year
2007