1632.E5F07.Knight16sV4.JuannaBirdEMP.NoIndex.L005.R1.001.sequences; Bird Egg Shells from Spain
bird metagenome
Bird Egg Shells from nest Gorrioncomun.C.20.2
ENA first public
2016-07-13
ENA last update
2016-07-13
External Id
SAMEA4076535
INSDC center alias
UCSDMI
INSDC center name
University of California San Diego Microbiome Initiative
INSDC first public
2016-07-13T17:01:27Z
INSDC last update
2016-07-13T01:15:12Z
INSDC status
public
Submitter Id
qiita_sid_1632:1632.E5F07.Knight16sV4.JuannaBirdEMP.NoIndex.L005.R1.001.sequences
abandoned
No
altitude
0
anonymized name
E5F07
arcsine_fledge_success_brood
Missing: Not collected
arcsine_fledge_success_clutch
Missing: Not collected
arcsine_hatching_success
Missing: Not collected
area
Via
assigned_from_geo
TRUE
backup
TRUE
bird_family
Passeridae
bird_order
Passeriformes
broken_eggs
0
brood_size
0
clutch_size
7
code_id_statistica
326
coll_date_juliane_days
137
collection date
5/18/07 0:00
collection_timestamp
5/18/07
comments_in_spanish
Huevo 7 raro; Todos hueros
common name
organismal metagenome
country
GAZ:Spain
country_nation
Spain
country_region
Hoya de Guadix
culturing_date
6/13/07
depth
0
dna_extracted
TRUE
elevation
947
empo_0
EMP sample
empo_1
Host-associated
empo_2
Animal
empo_3
Animal surface
enterobacteriaceae_density
23344682.83
enterococcus_density
1
env biome
mediterranean shrubland biome
env feature
nest of bird
env matter
egg
env package
host-associated
eppendorf_name
C-20.2
estefania_plates
5F07
extracted DNA avail now
TRUE
feathers
TRUE
fledge_success_brood
Missing: Not collected
fledge_success_clutch
Missing: Not collected
fledging_date
Missing: Not collected
geo loc name
Spain:Hoya de Guadix
hatching_date
Missing: Not collected
hatching_success
Missing: Not collected
hatching_synchrony
asyn
host common name
House sparrow
host scientific name
Passeriformes
host subject id
Gorrioncomun.C.20.2
host taxid
48849
latitude
37.31146944
lay_date_juliane_days
Missing: Not provided
laying_date
Missing: Not provided
log_enterobacteriaceae_density
7.368187996
log_enterococcus_density
0.301029996
log_mesophiles_density
7.661979574
log_rel_growth_enterobact
0.402356114
log_rel_growth_enterococcus
-4.597860531
log_rel_growth_mesophiles
0.563522139
log_rel_growth_staphylococcus
-0.261335143
log_staphylococcus_density
0
longitude
-3.119497222
mesophiles_density
45917640.61
nest_type
hole
number_fledging
Missing: Not provided
number_sampled_eggs
7
observer
Juanma
physical_specimen_location
CCME
physical_specimen_remaining
TRUE
plants
TRUE
platero_plates
P5B03
predated
No
public
TRUE
rel_growth_enterobacteriaceae
1.525550833
rel_growth_enterococcus
-0.999974757
rel_growth_staphylococcus
-0.452145975
relative_growth_mesophiles
2.660345992
required_sample_info_status
completed
sample name
qiita_sid_1632:1632.E5F07.Knight16sV4.JuannaBirdEMP.NoIndex.L005.R1.001.sequences
sample type
bird egg shell
sample_nest
Gorrioncomun.C.20.2
sample_progress
sequenced (16S)
sampling time
2
sampling_code_id
497
species name
Passer domesticus
staphylococcus_density
0
storing_days
26
unhatched_eggs
6
year
2007