1632.E3D08.Knight16sV4.JuannaBirdEMP.NoIndex.L005.R1.001.sequences; Bird Egg Shells from Spain
bird metagenome
Bird Egg Shells from nest Gorrioncomun.C.20.1
ENA first public
2016-07-13
ENA last update
2016-07-13
External Id
SAMEA4076292
INSDC center alias
UCSDMI
INSDC center name
University of California San Diego Microbiome Initiative
INSDC first public
2016-07-13T17:01:27Z
INSDC last update
2016-07-13T01:15:04Z
INSDC status
public
Submitter Id
qiita_sid_1632:1632.E3D08.Knight16sV4.JuannaBirdEMP.NoIndex.L005.R1.001.sequences
abandoned
No
altitude
0
anonymized name
E3D08
arcsine_fledge_success_brood
Missing: Not collected
arcsine_fledge_success_clutch
Missing: Not collected
arcsine_hatching_success
Missing: Not collected
area
Via
assigned_from_geo
TRUE
backup
FALSE
bird_family
Passeridae
bird_order
Passeriformes
broken_eggs
0
brood_size
0
clutch_size
7
code_id_statistica
325
coll_date_juliane_days
130
collection date
5/11/07 0:00
collection_timestamp
5/11/07
comments_in_spanish
Huevo 7 raro; Todos hueros
common name
organismal metagenome
country
GAZ:Spain
country_nation
Spain
country_region
Hoya de Guadix
culturing_date
5/12/07
depth
0
dna_extracted
TRUE
elevation
947
empo_0
EMP sample
empo_1
Host-associated
empo_2
Animal
empo_3
Animal surface
enterobacteriaceae_density
9243401.876
enterococcus_density
79229.15894
env biome
mediterranean shrubland biome
env feature
nest of bird
env matter
egg
env package
host-associated
eppendorf_name
C.29.1
estefania_plates
3D08
extracted DNA avail now
TRUE
feathers
TRUE
fledge_success_brood
Missing: Not collected
fledge_success_clutch
Missing: Not collected
fledging_date
Missing: Not collected
geo loc name
Spain:Hoya de Guadix
hatching_date
Missing: Not collected
hatching_success
Missing: Not collected
hatching_synchrony
asyn
host common name
House sparrow
host scientific name
Passeriformes
host subject id
Gorrioncomun.C.20.1
host taxid
48849
latitude
37.31146944
lay_date_juliane_days
Missing: Not provided
laying_date
Missing: Not provided
log_enterobacteriaceae_density
6.965831882
log_enterococcus_density
4.898890527
log_mesophiles_density
7.098457435
log_rel_growth_enterobact
0.402356114
log_rel_growth_enterococcus
-4.597860531
log_rel_growth_mesophiles
0.563522139
log_rel_growth_staphylococcus
-0.261335143
log_staphylococcus_density
0.261335143
longitude
-3.119497222
mesophiles_density
12544616.83
nest_type
hole
number_fledging
Missing: Not provided
number_sampled_eggs
7
observer
Juanma
physical_location_1
U Granada
physical_specimen_location
CCME
physical_specimen_remaining
TRUE
plants
TRUE
platero_plates
P3B03
predated
No
public
TRUE
rel_growth_enterobacteriaceae
1.525550833
rel_growth_enterococcus
-0.999974757
rel_growth_staphylococcus
-0.452145975
relative_growth_mesophiles
2.660345992
required_sample_info_status
completed
sample name
qiita_sid_1632:1632.E3D08.Knight16sV4.JuannaBirdEMP.NoIndex.L005.R1.001.sequences
sample type
bird egg shell
sample_nest
Gorrioncomun.C.20.1
sample_progress
sequenced (16S)
sampling time
1
sampling_code_id
286
species name
Passer domesticus
staphylococcus_density
0.825303739
storing_days
1
unhatched_eggs
6
year
2007