1632.E2F10.Knight16sV4.JuannaBirdEMP.NoIndex.L005.R1.001.sequences; Bird Egg Shells from Spain
bird metagenome
Bird Egg Shells from nest Carbonero.C.12.1
ENA first public
2016-07-13
ENA last update
2016-07-13
External Id
SAMEA4076211
INSDC center alias
UCSDMI
INSDC center name
University of California San Diego Microbiome Initiative
INSDC first public
2016-07-13T17:01:27Z
INSDC last update
2016-07-13T01:15:02Z
INSDC status
public
Submitter Id
qiita_sid_1632:1632.E2F10.Knight16sV4.JuannaBirdEMP.NoIndex.L005.R1.001.sequences
abandoned
No
altitude
0
anonymized name
E2F10
arcsine_fledge_success_brood
0.100167421
arcsine_fledge_success_clutch
0.095011212
arcsine_hatching_success
1.249045772
area
Cortijo Hedionda
assigned_from_geo
TRUE
backup
FALSE
bird_family
Paridae
bird_order
Passeriformes
broken_eggs
0
brood_size
9
clutch_size
10
code_id_statistica
116
coll_date_juliane_days
121
collection date
5/2/07 0:00
collection_timestamp
5/2/07
common name
organismal metagenome
country
GAZ:Spain
country_nation
Spain
country_region
Hoya de Guadix
culturing_date
5/14/07
depth
0
dna_extracted
TRUE
elevation
1280
empo_0
EMP sample
empo_1
Host-associated
empo_2
Animal
empo_3
Animal surface
enterobacteriaceae_density
627442463.2
enterococcus_density
9.254776333
env biome
mediterranean shrubland biome
env feature
nest of bird
env matter
egg
env package
host-associated
eppendorf_name
C-12.1
estefania_plates
2F10
extracted DNA avail now
TRUE
feathers
TRUE
fledge_success_brood
1
fledge_success_clutch
0.9
fledging_date
5/29/07
geo loc name
Spain:Hoya de Guadix
hatching_date
5/13/07
hatching_success
0.9
hatching_synchrony
asyn
host common name
Great tit
host scientific name
Passeriformes
host subject id
Carbonero.C.12.1
host taxid
9157
latitude
37.32121667
lay_date_juliane_days
109
laying_date
7/19/07
log_enterobacteriaceae_density
8.797573908
log_enterococcus_density
1.010926192
log_mesophiles_density
7.17323755
log_rel_growth_enterobact
-2.455931759
log_rel_growth_enterococcus
1.887542157
log_rel_growth_mesophiles
-0.722450976
log_rel_growth_staphylococcus
-0.353124383
log_staphylococcus_density
0.353124383
longitude
-3.024819444
mesophiles_density
14901758.5
nest_type
hole
number_fledging
9
number_sampled_eggs
10
observer
Juanma
physical_location_1
U Granada
physical_specimen_location
CCME
physical_specimen_remaining
TRUE
plants
FALSE
platero_plates
P2E8
predated
No
public
TRUE
rel_growth_enterobacteriaceae
-0.996499998
rel_growth_enterococcus
76.18664362
rel_growth_staphylococcus
-0.556518389
relative_growth_mesophiles
-0.810526261
required_sample_info_status
completed
sample name
qiita_sid_1632:1632.E2F10.Knight16sV4.JuannaBirdEMP.NoIndex.L005.R1.001.sequences
sample type
bird egg shell
sample_nest
Carbonero.C.12.1
sample_progress
sequenced (16S)
sampling time
1
sampling_code_id
168
species name
Parus major
staphylococcus_density
1.254884926
storing_days
12
unhatched_eggs
1
year
2007