1632.E5C05.Knight16sV4.JuannaBirdEMP.NoIndex.L005.R1.001.sequences; Bird Egg Shells from Spain
bird metagenome
Bird Egg Shells from nest Grajilla.Gra7.1
ENA first public
2016-07-13
ENA last update
2016-07-13
External Id
SAMEA4076493
INSDC center alias
UCSDMI
INSDC center name
University of California San Diego Microbiome Initiative
INSDC first public
2016-07-13T17:01:27Z
INSDC last update
2016-07-13T01:15:10Z
INSDC status
public
Submitter Id
qiita_sid_1632:1632.E5C05.Knight16sV4.JuannaBirdEMP.NoIndex.L005.R1.001.sequences
abandoned
No
altitude
0
anonymized name
E5C05
arcsine_fledge_success_brood
0.084616364
arcsine_fledge_success_clutch
0.084616364
arcsine_hatching_success
1.570796327
area
Rambla Zaraguil
assigned_from_geo
TRUE
backup
TRUE
bird_family
Corvidae
bird_order
Passeriformes
broken_eggs
0
brood_size
7
clutch_size
7
code_id_statistica
363
coll_date_juliane_days
131
collection date
5/12/07 0:00
collection_timestamp
5/12/07
common name
organismal metagenome
country
GAZ:Spain
country_nation
Spain
country_region
Hoya de Guadix
culturing_date
5/14/07
depth
0
dna_extracted
TRUE
elevation
1091
empo_0
EMP sample
empo_1
Host-associated
empo_2
Animal
empo_3
Animal surface
enterobacteriaceae_density
373727.8748
enterococcus_density
3.322025554
env biome
mediterranean shrubland biome
env feature
nest of bird
env matter
egg
env package
host-associated
eppendorf_name
GRA 2.1
estefania_plates
5C05
extracted DNA avail now
TRUE
feathers
TRUE
fledge_success_brood
0.714285714
fledge_success_clutch
0.714285714
fledging_date
6/16/07
geo loc name
Spain:Hoya de Guadix
hatching_date
5/25/07
hatching_success
1
hatching_synchrony
asyn
host common name
Jackdaw
host scientific name
Passeriformes
host subject id
Grajilla.Gra7.1
host taxid
30423
latitude
37.31888611
lay_date_juliane_days
118
laying_date
7/28/07
log_enterobacteriaceae_density
5.572556653
log_enterococcus_density
0.63568733
log_mesophiles_density
6.937071795
log_rel_growth_enterobact
0.267605706
log_rel_growth_enterococcus
-0.298623174
log_rel_growth_mesophiles
-0.591759889
log_rel_growth_staphylococcus
-0.081932669
log_staphylococcus_density
0.081932669
longitude
-3.087372222
mesophiles_density
8651108.213
nest_type
hole
number_fledging
5
number_sampled_eggs
7
observer
Juan
physical_specimen_location
CCME
physical_specimen_remaining
TRUE
plants
TRUE
platero_plates
P4H06
predated
No
public
TRUE
rel_growth_enterobacteriaceae
0.851849573
rel_growth_enterococcus
-0.497221352
rel_growth_staphylococcus
-0.171929467
relative_growth_mesophiles
-0.743999914
required_sample_info_status
completed
sample name
qiita_sid_1632:1632.E5C05.Knight16sV4.JuannaBirdEMP.NoIndex.L005.R1.001.sequences
sample type
bird egg shell
sample_nest
Grajilla.Gra7.1
sample_progress
sequenced (16S)
sampling time
1
sampling_code_id
311
species name
Corvus monedula
staphylococcus_density
0.207626597
storing_days
2
unhatched_eggs
0
year
2007