1632.E2E04.r.EMPbird.v4.NoIndex.L001; Bird Egg Shells from Spain
bird metagenome
Bird Egg Shells from nest Crialo.cc19e.2
ENA first public
2016-07-13
ENA last update
2016-07-13
External Id
SAMEA4076192
INSDC center alias
UCSDMI
INSDC center name
University of California San Diego Microbiome Initiative
INSDC first public
2016-07-13T17:01:27Z
INSDC last update
2016-07-13T01:15:01Z
INSDC status
public
Submitter Id
qiita_sid_1632:1632.E2E04.r.EMPbird.v4.NoIndex.L001
altitude
0
anonymized name
E2E04
arcsine_fledge_success_brood
Missing: Not collected
arcsine_fledge_success_clutch
Missing: Not collected
arcsine_hatching_success
Missing: Not collected
area
Charches
assigned_from_geo
TRUE
backup
FALSE
bird_family
Cuculidae
bird_order
Cuculiformes
broken_eggs
Missing: Not collected
brood_size
Missing: Not collected
clutch_size
2
code_id_statistica
216
coll_date_juliane_days
112
collection date
4/23/07 0:00
collection_timestamp
4/23/07
common name
organismal metagenome
country
GAZ:Spain
country_nation
Spain
country_region
Hoya de Guadix
culturing_date
5/1/07
depth
0
dna_extracted
TRUE
elevation
1310
empo_0
EMP sample
empo_1
Host-associated
empo_2
Animal
empo_3
Animal surface
enterobacteriaceae_density
279.7470431
enterococcus_density
1
env biome
mediterranean shrubland biome
env feature
nest of bird
env matter
egg
env package
host-associated
eppendorf_name
cc19E.3
estefania_plates
2.00E+04
extracted DNA avail now
TRUE
feathers
FALSE
fledge_success_brood
Missing: Not collected
fledge_success_clutch
Missing: Not collected
fledging_date
Missing: Not collected
geo loc name
Spain:Hoya de Guadix
hatching_date
Missing: Not collected
hatching_success
Missing: Not collected
hatching_synchrony
asyn
host common name
Great-spotted cuckoo
host scientific name
Cuculiformes
host subject id
Crialo.cc19e.2
host taxid
78203
latitude
37.28454722
lay_date_juliane_days
Missing: Not provided
laying_date
Missing: Not provided
log_enterobacteriaceae_density
2.448315191
log_enterococcus_density
0.301029996
log_mesophiles_density
0
log_rel_growth_enterobact
2.448315191
log_rel_growth_enterococcus
0.301029996
log_rel_growth_mesophiles
-0.107124135
log_rel_growth_staphylococcus
-0.107124135
log_staphylococcus_density
0
longitude
-2.985819444
mesophiles_density
0
nest_type
open
number_fledging
Missing: Not provided
number_sampled_eggs
2
observer
Juan
physical_location_1
U Granada
physical_specimen_location
CCME
physical_specimen_remaining
TRUE
plants
TRUE
platero_plates
P2A08
public
TRUE
rel_growth_enterobacteriaceae
279.7470431
rel_growth_enterococcus
1
rel_growth_staphylococcus
-0.218595577
relative_growth_mesophiles
-0.218595577
required_sample_info_status
completed
sample name
qiita_sid_1632:1632.E2E04.r.EMPbird.v4.NoIndex.L001
sample type
bird egg shell
sample_nest
Crialo.cc19e.2
sample_progress
sequenced (16S)
sampling time
2
sampling_code_id
111
species name
Clamator glandarius
staphylococcus_density
0
storing_days
8
unhatched_eggs
Missing: Not provided
year
2007