1632.E2F09.Knight16sV4.JuannaBirdEMP.NoIndex.L005.R1.001.sequences; Bird Egg Shells from Spain
bird metagenome
Bird Egg Shells from nest Pitoreal.C.77.1
ENA first public
2016-07-13
ENA last update
2016-07-13
External Id
SAMEA4076210
INSDC center alias
UCSDMI
INSDC center name
University of California San Diego Microbiome Initiative
INSDC first public
2016-07-13T17:01:27Z
INSDC last update
2016-07-13T01:15:02Z
INSDC status
public
Submitter Id
qiita_sid_1632:1632.E2F09.Knight16sV4.JuannaBirdEMP.NoIndex.L005.R1.001.sequences
abandoned
No
altitude
0
anonymized name
E2F09
arcsine_fledge_success_brood
Missing: Not collected
arcsine_fledge_success_clutch
Missing: Not collected
arcsine_hatching_success
Missing: Not collected
area
Cortijo Conejo
assigned_from_geo
TRUE
backup
FALSE
bird_family
Picidae
bird_order
Piciformes
broken_eggs
0
brood_size
0
clutch_size
6
code_id_statistica
464
coll_date_juliane_days
119
collection date
4/30/07 0:00
collection_timestamp
4/30/07
comments_in_spanish
Sin eclosionar
common name
organismal metagenome
country
GAZ:Spain
country_nation
Spain
country_region
Hoya de Guadix
culturing_date
5/1/07
depth
0
dna_extracted
TRUE
elevation
1055
empo_0
EMP sample
empo_1
Host-associated
empo_2
Animal
empo_3
Animal surface
enterobacteriaceae_density
6374236.593
enterococcus_density
4.056332377
env biome
mediterranean shrubland biome
env feature
nest of bird
env matter
egg
env package
host-associated
eppendorf_name
C-77.1
estefania_plates
2F09
extracted DNA avail now
TRUE
feathers
FALSE
fledge_success_brood
Missing: Not collected
fledge_success_clutch
Missing: Not collected
fledging_date
Missing: Not collected
geo loc name
Spain:Hoya de Guadix
hatching_date
Missing: Not collected
hatching_success
Missing: Not collected
host common name
Eurasian green woodpecker
host scientific name
Piciformes
host subject id
Pitoreal.C.77.1
host taxid
100825
latitude
37.40583611
lay_date_juliane_days
89
laying_date
6/29/07
log_enterobacteriaceae_density
6.804428247
log_enterococcus_density
0.703835615
log_mesophiles_density
7.797797607
log_rel_growth_enterobact
-0.342422599
log_rel_growth_enterococcus
2.994433106
log_rel_growth_mesophiles
-0.307763371
log_rel_growth_staphylococcus
0.143256263
log_staphylococcus_density
0.171110902
longitude
-3.082122222
mesophiles_density
62776572.51
nest_type
hole
number_fledging
Missing: Not provided
number_sampled_eggs
6
observer
Juanma
physical_location_1
U Granada
physical_specimen_location
CCME
physical_specimen_remaining
TRUE
plants
FALSE
platero_plates
P2D011
predated
No
public
TRUE
rel_growth_enterobacteriaceae
-0.54545446
rel_growth_enterococcus
986.2635566
rel_growth_staphylococcus
0.390773039
relative_growth_mesophiles
-0.5076923
required_sample_info_status
completed
sample name
qiita_sid_1632:1632.E2F09.Knight16sV4.JuannaBirdEMP.NoIndex.L005.R1.001.sequences
sample type
bird egg shell
sample_nest
Pitoreal.C.77.1
sample_progress
sequenced (16S)
sampling time
1
sampling_code_id
159
species name
Picus viridis
staphylococcus_density
0.482896712
storing_days
1
unhatched_eggs
6
year
2007