1632.E5E10.Knight16sV4.JuannaBirdEMP.NoIndex.L005.R1.001.sequences; Bird Egg Shells from Spain
bird metagenome
Bird Egg Shells from nest Collalbanegra.Col1b.2
ENA first public
2016-07-13
ENA last update
2016-07-13
External Id
SAMEA4076525
INSDC center alias
UCSDMI
INSDC center name
University of California San Diego Microbiome Initiative
INSDC first public
2016-07-13T17:01:27Z
INSDC last update
2016-07-13T01:15:11Z
INSDC status
public
Submitter Id
qiita_sid_1632:1632.E5E10.Knight16sV4.JuannaBirdEMP.NoIndex.L005.R1.001.sequences
abandoned
No
altitude
0
anonymized name
E5E10
arcsine_fledge_success_brood
0.100167421
arcsine_fledge_success_clutch
0.089562407
arcsine_hatching_success
Missing: Not collected
area
Fuentealamo
assigned_from_geo
TRUE
backup
TRUE
bird_family
Muscicapidae
bird_order
Passeriformes
broken_eggs
0
brood_size
4
clutch_size
5
code_id_statistica
185
coll_date_juliane_days
152
collection date
6/2/07 0:00
collection_timestamp
6/2/07
common name
organismal metagenome
country
GAZ:Spain
country_nation
Spain
country_region
Hoya de Guadix
culturing_date
6/20/07
depth
0
dna_extracted
TRUE
elevation
1145
empo_0
EMP sample
empo_1
Host-associated
empo_2
Animal
empo_3
Animal surface
enterobacteriaceae_density
34117.25409
enterococcus_density
1
env biome
mediterranean shrubland biome
env feature
nest of bird
env matter
egg
env package
host-associated
eppendorf_name
COL 1B.1
estefania_plates
5.00E+10
extracted DNA avail now
TRUE
feathers
TRUE
fledge_success_brood
1
fledge_success_clutch
0.8
fledging_date
6/21/07
geo loc name
Spain:Hoya de Guadix
hatching_date
6/10/07
hatching_success
Missing: Not collected
hatching_synchrony
asyn
host common name
Black weathear
host scientific name
Passeriformes
host subject id
Collalbanegra.Col1b.2
host taxid
391703
latitude
37.34600556
lay_date_juliane_days
139
laying_date
8/18/07
log_enterobacteriaceae_density
4.532986799
log_enterococcus_density
0.301029996
log_mesophiles_density
6.871792685
log_rel_growth_enterobact
Missing: Not provided
log_rel_growth_enterococcus
Missing: Not provided
log_rel_growth_mesophiles
Missing: Not provided
log_rel_growth_staphylococcus
Missing: Not provided
log_staphylococcus_density
0.30832024
longitude
-3.061197222
mesophiles_density
7443764.53
nest_type
hole
number_fledging
4
number_sampled_eggs
5
observer
Juanma
physical_specimen_location
CCME
physical_specimen_remaining
TRUE
plants
FALSE
platero_plates
P5D02
predated
No
public
TRUE
required_sample_info_status
completed
sample name
qiita_sid_1632:1632.E5E10.Knight16sV4.JuannaBirdEMP.NoIndex.L005.R1.001.sequences
sample type
bird egg shell
sample_nest
Collalbanegra.Col1b.2
sample_progress
sequenced (16S)
sampling time
2
sampling_code_id
529
species name
Oenanthe leucura
staphylococcus_density
1.033856185
storing_days
18
unhatched_eggs
1
year
2007