1632.E3H11.Knight16sV4.JuannaBirdEMP.NoIndex.L005.R1.001.sequences; Bird Egg Shells from Spain
bird metagenome
Bird Egg Shells from nest Grajilla.Gra6.1
ENA first public
2016-07-13
ENA last update
2016-07-13
External Id
SAMEA4076356
INSDC center alias
UCSDMI
INSDC center name
University of California San Diego Microbiome Initiative
INSDC first public
2016-07-13T17:01:27Z
INSDC last update
2016-07-13T01:15:06Z
INSDC status
public
Submitter Id
qiita_sid_1632:1632.E3H11.Knight16sV4.JuannaBirdEMP.NoIndex.L005.R1.001.sequences
abandoned
No
altitude
0
anonymized name
E3H11
arcsine_fledge_success_brood
0.100167421
arcsine_fledge_success_clutch
0.100167421
arcsine_hatching_success
1.107148718
area
Rambla Zaraguil
assigned_from_geo
TRUE
backup
FALSE
bird_family
Corvidae
bird_order
Passeriformes
broken_eggs
0
brood_size
4
clutch_size
5
code_id_statistica
361
coll_date_juliane_days
131
collection date
5/12/07 0:00
collection_timestamp
5/12/07
common name
organismal metagenome
country
GAZ:Spain
country_nation
Spain
country_region
Hoya de Guadix
culturing_date
5/14/07
depth
0
dna_extracted
TRUE
elevation
1085
empo_0
EMP sample
empo_1
Host-associated
empo_2
Animal
empo_3
Animal surface
enterobacteriaceae_density
2155911.992
enterococcus_density
4.906558327
env biome
mediterranean shrubland biome
env feature
nest of bird
env matter
egg
env package
host-associated
eppendorf_name
GRA 6.1
estefania_plates
3H11
extracted DNA avail now
TRUE
feathers
TRUE
fledge_success_brood
1
fledge_success_clutch
1
fledging_date
6/16/07
geo loc name
Spain:Hoya de Guadix
hatching_date
5/25/07
hatching_success
0.8
hatching_synchrony
asyn
host common name
Jackdaw
host scientific name
Passeriformes
host subject id
Grajilla.Gra6.1
host taxid
30423
latitude
37.31888611
lay_date_juliane_days
121
laying_date
7/31/07
log_enterobacteriaceae_density
6.33363123
log_enterococcus_density
0.771334497
log_mesophiles_density
6.663624814
log_rel_growth_enterobact
0.042751962
log_rel_growth_enterococcus
3.256327241
log_rel_growth_mesophiles
0.110698276
log_rel_growth_staphylococcus
-0.181955733
log_staphylococcus_density
0.181955733
longitude
-3.087372222
mesophiles_density
4609191.156
nest_type
hole
number_fledging
4
number_sampled_eggs
5
observer
Juan
physical_specimen_location
CCME
physical_specimen_remaining
TRUE
plants
TRUE
platero_plates
P3D07
predated
No
public
TRUE
rel_growth_enterobacteriaceae
0.103448228
rel_growth_enterococcus
1803.376827
rel_growth_staphylococcus
-0.342275125
relative_growth_mesophiles
0.290322518
required_sample_info_status
completed
sample name
qiita_sid_1632:1632.E3H11.Knight16sV4.JuannaBirdEMP.NoIndex.L005.R1.001.sequences
sample type
bird egg shell
sample_nest
Grajilla.Gra6.1
sample_progress
sequenced (16S)
sampling time
1
sampling_code_id
312
species name
Corvus monedula
staphylococcus_density
0.52039255
storing_days
2
unhatched_eggs
1
year
2007