Bird Egg Shells from Spain; 1632.E6H05.Knight16sV4.JuannaBirdEMP.NoIndex.L005.R1.001.sequences
bird metagenome
Bird Egg Shells from nest Abubilla.793.1
ENA first public
2016-07-13
ENA last update
2016-07-13
External Id
SAMEA4076638
INSDC center alias
UCSDMI
INSDC center name
University of California San Diego Microbiome Initiative
INSDC first public
2016-07-13T17:01:27Z
INSDC last update
2016-07-13T01:15:15Z
INSDC status
public
Submitter Id
qiita_sid_1632:1632.E6H05.Knight16sV4.JuannaBirdEMP.NoIndex.L005.R1.001.sequences
abandoned
egg phase
altitude
0
anonymized name
E6H05
arcsine_fledge_success_brood
Missing: Not collected
arcsine_fledge_success_clutch
Missing: Not collected
arcsine_hatching_success
Missing: Not collected
area
Zona Miki
assigned_from_geo
TRUE
backup
TRUE
bird_family
Upuidae
bird_order
Upupiformes
broken_eggs
Missing: Not collected
brood_size
Missing: Not collected
clutch_size
7
code_id_statistica
40
coll_date_juliane_days
168
collection date
6/18/07 0:00
collection_timestamp
6/18/07
comments_in_spanish
Abandonados
common name
organismal metagenome
country
GAZ:Spain
country_nation
Spain
country_region
Hoya de Guadix
culturing_date
6/28/07
depth
0
dna_extracted
TRUE
elevation
923
empo_0
EMP sample
empo_1
Host-associated
empo_2
Animal
empo_3
Animal surface
enterobacteriaceae_density
32968077.08
enterococcus_density
15481630.79
env biome
mediterranean shrubland biome
env feature
nest of bird
env matter
egg
env package
host-associated
eppendorf_name
793.1
estefania_plates
6H05
extracted DNA avail now
TRUE
feathers
FALSE
fledge_success_brood
Missing: Not collected
fledge_success_clutch
Missing: Not collected
fledging_date
Missing: Not collected
geo loc name
Spain:Hoya de Guadix
hatching_date
Missing: Not collected
hatching_success
Missing: Not collected
hatching_synchrony
asyn
host common name
Eurasian hoopoe
host scientific name
Upupiformes
host subject id
Abubilla.793.1
host taxid
57439
latitude
37.32240556
lay_date_juliane_days
153
laying_date
9/1/07
log_enterobacteriaceae_density
7.51809363
log_enterococcus_density
7.189816734
log_mesophiles_density
7.088194626
log_rel_growth_enterobact
Missing: Not provided
log_rel_growth_enterococcus
Missing: Not provided
log_rel_growth_mesophiles
Missing: Not provided
log_rel_growth_staphylococcus
Missing: Not provided
log_staphylococcus_density
0.96050125
longitude
-3.128919444
mesophiles_density
12251650.27
nest_type
hole
number_fledging
Missing: Not provided
number_sampled_eggs
7
observer
Manolo
physical_specimen_location
CCME
physical_specimen_remaining
TRUE
plants
FALSE
platero_plates
P6A010
predated
No
public
TRUE
required_sample_info_status
completed
sample name
qiita_sid_1632:1632.E6H05.Knight16sV4.JuannaBirdEMP.NoIndex.L005.R1.001.sequences
sample type
bird egg shell
sample_nest
Abubilla.793.1
sample_progress
sequenced (16S)
sampling time
1
sampling_code_id
609
species name
Upupa epops
staphylococcus_density
8.130640631
storing_days
10
unhatched_eggs
Missing: Not provided
year
2007