1632.E2F05.Knight16sV4.JuannaBirdEMP.NoIndex.L005.R1.001.sequences; Bird Egg Shells from Spain
bird metagenome
Bird Egg Shells from nest Urraca.UFA1.1
ENA first public
2016-07-13
ENA last update
2016-07-13
External Id
SAMEA4076206
INSDC center alias
UCSDMI
INSDC center name
University of California San Diego Microbiome Initiative
INSDC first public
2016-07-13T17:01:27Z
INSDC last update
2016-07-13T01:15:01Z
INSDC status
public
Submitter Id
qiita_sid_1632:1632.E2F05.Knight16sV4.JuannaBirdEMP.NoIndex.L005.R1.001.sequences
abandoned
No
altitude
0
anonymized name
E2F05
arcsine_fledge_success_brood
0.091414358
arcsine_fledge_success_clutch
0.079139525
arcsine_hatching_success
1.570796327
area
Fuentealamo
assigned_from_geo
TRUE
backup
FALSE
bird_family
Corvidae
bird_order
Passeriformes
broken_eggs
1
brood_size
6
clutch_size
7
code_id_statistica
565
coll_date_juliane_days
113
collection date
4/24/07 0:00
collection_timestamp
4/24/07
common name
organismal metagenome
country
GAZ:Spain
country_nation
Spain
country_region
Hoya de Guadix
culturing_date
5/1/07
depth
0
dna_extracted
TRUE
elevation
1145
empo_0
EMP sample
empo_1
Host-associated
empo_2
Animal
empo_3
Animal surface
enterobacteriaceae_density
6.874466001
enterococcus_density
0
env biome
mediterranean shrubland biome
env feature
nest of bird
env matter
egg
env package
host-associated
eppendorf_name
UFA 1.2
estefania_plates
2F05
extracted DNA avail now
TRUE
feathers
FALSE
fledge_success_brood
0.833333333
fledge_success_clutch
0.625
fledging_date
6/2/07
geo loc name
Spain:Hoya de Guadix
hatching_date
5/9/07
hatching_success
1
hatching_synchrony
asyn
host common name
Black-billed Magpie
host scientific name
Passeriformes
host subject id
Urraca.UFA1.1
host taxid
34924
latitude
37.34600556
lay_date_juliane_days
103
laying_date
7/13/07
log_enterobacteriaceae_density
0.896221112
log_enterococcus_density
0
log_mesophiles_density
6.730783718
log_rel_growth_enterobact
5.499015074
log_rel_growth_enterococcus
0.302211498
log_rel_growth_mesophiles
-0.243233304
log_rel_growth_staphylococcus
-0.214843727
log_staphylococcus_density
0.242348727
longitude
-3.061197222
mesophiles_density
5380016.87
nest_type
open
number_fledging
5
number_sampled_eggs
7
observer
Juanma
physical_location_1
U Granada
physical_specimen_location
CCME
physical_specimen_remaining
TRUE
plants
TRUE
platero_plates
P2B03
predated
No
public
TRUE
rel_growth_enterobacteriaceae
315510.4136
rel_growth_enterococcus
1.005448427
rel_growth_staphylococcus
-0.390243733
relative_growth_mesophiles
-0.42882828
required_sample_info_status
completed
sample name
qiita_sid_1632:1632.E2F05.Knight16sV4.JuannaBirdEMP.NoIndex.L005.R1.001.sequences
sample type
bird egg shell
sample_nest
Urraca.UFA1.1
sample_progress
sequenced (16S)
sampling time
1
sampling_code_id
117
species name
Pica pica
staphylococcus_density
0.747224565
storing_days
7
unhatched_eggs
0
year
2007