Bird Egg Shells from Spain; 1632.E5A11.Knight16sV4.JuannaBirdEMP.NoIndex.L005.R1.001.sequences
bird metagenome
Bird Egg Shells from nest Gorrionchillon.Chi7.2
ENA first public
2016-07-13
ENA last update
2016-07-13
External Id
SAMEA4076473
INSDC center alias
UCSDMI
INSDC center name
University of California San Diego Microbiome Initiative
INSDC first public
2016-07-13T17:01:27Z
INSDC last update
2016-07-13T01:15:10Z
INSDC status
public
Submitter Id
qiita_sid_1632:1632.E5A11.Knight16sV4.JuannaBirdEMP.NoIndex.L005.R1.001.sequences
altitude
0
anonymized name
E5A11
arcsine_fledge_success_brood
Missing: Not collected
arcsine_fledge_success_clutch
Missing: Not collected
arcsine_hatching_success
Missing: Not collected
area
Cortijo Bernabeles
assigned_from_geo
TRUE
backup
TRUE
bird_family
Passeridae
bird_order
Passeriformes
broken_eggs
Missing: Not collected
brood_size
Missing: Not collected
clutch_size
5
code_id_statistica
322
coll_date_juliane_days
156
collection date
6/6/07 0:00
collection_timestamp
6/6/07
comments_in_spanish
Sin datos de los pollos ni de la eclosion
common name
organismal metagenome
country
GAZ:Spain
country_nation
Spain
country_region
Hoya de Guadix
culturing_date
6/20/07
depth
0
dna_extracted
TRUE
elevation
1162
empo_0
EMP sample
empo_1
Host-associated
empo_2
Animal
empo_3
Animal surface
enterobacteriaceae_density
13427398.53
enterococcus_density
137415.8973
env biome
mediterranean shrubland biome
env feature
nest of bird
env matter
egg
env package
host-associated
eppendorf_name
CHI 7.2
estefania_plates
5A11
extracted DNA avail now
TRUE
feathers
TRUE
fledge_success_brood
Missing: Not collected
fledge_success_clutch
Missing: Not collected
fledging_date
Missing: Not collected
geo loc name
Spain:Hoya de Guadix
hatching_date
Missing: Not collected
hatching_success
Missing: Not collected
hatching_synchrony
asyn
host common name
Rock Sparrow
host scientific name
Passeriformes
host subject id
Gorrionchillon.Chi7.2
host taxid
150913
latitude
37.31399167
lay_date_juliane_days
Missing: Not provided
laying_date
Missing: Not provided
log_enterobacteriaceae_density
7.127991912
log_enterococcus_density
5.138040138
log_mesophiles_density
7.515131837
log_rel_growth_enterobact
0.308716791
log_rel_growth_enterococcus
-2.421597618
log_rel_growth_mesophiles
-0.047316897
log_rel_growth_staphylococcus
0
log_staphylococcus_density
0
longitude
-3.056652778
mesophiles_density
32744006.95
nest_type
hole
number_fledging
Missing: Not provided
number_sampled_eggs
5
observer
Juanma
physical_specimen_location
CCME
physical_specimen_remaining
TRUE
plants
TRUE
platero_plates
P5D06
public
TRUE
rel_growth_enterobacteriaceae
1.035714129
rel_growth_enterococcus
-0.996212066
rel_growth_staphylococcus
0
relative_growth_mesophiles
-0.103225804
required_sample_info_status
completed
sample name
qiita_sid_1632:1632.E5A11.Knight16sV4.JuannaBirdEMP.NoIndex.L005.R1.001.sequences
sample type
bird egg shell
sample_nest
Gorrionchillon.Chi7.2
sample_progress
sequenced (16S)
sampling time
2
sampling_code_id
542
species name
Petronia petronia
staphylococcus_density
0
storing_days
14
unhatched_eggs
Missing: Not provided
year
2007