1632.E6E05.Knight16sV4.JuannaBirdEMP.NoIndex.L005.R1.001.sequences; Bird Egg Shells from Spain
bird metagenome
Bird Egg Shells from nest Carraca.CA10.2
ENA first public
2016-07-13
ENA last update
2016-07-13
External Id
SAMEA4076611
INSDC center alias
UCSDMI
INSDC center name
University of California San Diego Microbiome Initiative
INSDC first public
2016-07-13T17:01:27Z
INSDC last update
2016-07-13T01:15:14Z
INSDC status
public
Submitter Id
qiita_sid_1632:1632.E6E05.Knight16sV4.JuannaBirdEMP.NoIndex.L005.R1.001.sequences
altitude
0
anonymized name
E6E05
arcsine_fledge_success_brood
0
arcsine_fledge_success_clutch
0
arcsine_hatching_success
0.684719203
area
Fuentealamo
assigned_from_geo
TRUE
backup
TRUE
bird_family
Coraciidae
bird_order
Coraciiformes
broken_eggs
0
brood_size
2
clutch_size
5
code_id_statistica
149
coll_date_juliane_days
161
collection date
6/11/07 0:00
collection_timestamp
6/11/07
common name
organismal metagenome
country
GAZ:Spain
country_nation
Spain
country_region
Hoya de Guadix
culturing_date
6/26/07
depth
0
dna_extracted
TRUE
elevation
1145
empo_0
EMP sample
empo_1
Host-associated
empo_2
Animal
empo_3
Animal surface
enterobacteriaceae_density
3636482.696
enterococcus_density
4.553835362
env biome
mediterranean shrubland biome
env feature
nest of bird
env matter
egg
env package
host-associated
eppendorf_name
CarraCACA10 2
estefania_plates
6.00E+04
extracted DNA avail now
TRUE
feathers
FALSE
fledge_success_brood
0
fledge_success_clutch
0
fledging_date
Missing: Not collected
geo loc name
Spain:Hoya de Guadix
hatching_date
6/18/07
hatching_success
0.4
hatching_synchrony
asyn
host common name
European roller
host scientific name
Coraciiformes
host subject id
Carraca.CA10.2
host taxid
188338
latitude
37.34600556
lay_date_juliane_days
133
laying_date
8/12/07
log_enterobacteriaceae_density
6.560681645
log_enterococcus_density
0.744593001
log_mesophiles_density
7.917228854
log_rel_growth_enterobact
0.212088837
log_rel_growth_enterococcus
-4.549215012
log_rel_growth_mesophiles
0.806875373
log_rel_growth_staphylococcus
0
log_staphylococcus_density
0
longitude
-3.061197222
mesophiles_density
82647334
nest_type
hole
number_fledging
0
number_sampled_eggs
5
observer
Juanma
physical_specimen_location
CCME
physical_specimen_remaining
TRUE
plants
FALSE
platero_plates
P6A02
public
TRUE
rel_growth_enterobacteriaceae
0.629629347
rel_growth_enterococcus
-0.999971765
rel_growth_staphylococcus
0
relative_growth_mesophiles
5.410255991
required_sample_info_status
completed
sample name
qiita_sid_1632:1632.E6E05.Knight16sV4.JuannaBirdEMP.NoIndex.L005.R1.001.sequences
sample type
bird egg shell
sample_nest
Carraca.CA10.2
sample_progress
sequenced (16S)
sampling time
2
sampling_code_id
592
species name
Coracias garrulus
staphylococcus_density
0
storing_days
15
unhatched_eggs
3
year
2007