1632.E3B07.r.EMPbird.v4.NoIndex.L001; Bird Egg Shells from Spain
bird metagenome
Bird Egg Shells from nest Alcaudon.Ci4.2
ENA first public
2016-07-13
ENA last update
2016-07-13
External Id
SAMEA4076260
INSDC center alias
UCSDMI
INSDC center name
University of California San Diego Microbiome Initiative
INSDC first public
2016-07-13T17:01:27Z
INSDC last update
2016-07-13T01:15:03Z
INSDC status
public
Submitter Id
qiita_sid_1632:1632.E3B07.r.EMPbird.v4.NoIndex.L001
altitude
0
anonymized name
E3B07
arcsine_fledge_success_brood
Missing: Not collected
arcsine_fledge_success_clutch
Missing: Not collected
arcsine_hatching_success
1.570796327
area
Hueneja, Carretera izq
assigned_from_geo
TRUE
backup
FALSE
bird_family
Laniidae
bird_order
Passeriformes
broken_eggs
0
brood_size
6
clutch_size
6
code_id_statistica
67
coll_date_juliane_days
Missing: Not collected
collection date
5/8/07 0:00
collection_timestamp
5/8/07
common name
organismal metagenome
country
GAZ:Spain
country_nation
Spain
country_region
Hoya de Guadix
culturing_date
5/11/07
depth
0
dna_extracted
TRUE
elevation
1172
empo_0
EMP sample
empo_1
Host-associated
empo_2
Animal
empo_3
Animal surface
enterobacteriaceae_density
5.188385979
enterococcus_density
1.06033007
env biome
mediterranean shrubland biome
env feature
nest of bird
env matter
egg
env package
host-associated
eppendorf_name
Alc.Ci.4
estefania_plates
3B07
extracted DNA avail now
TRUE
feathers
TRUE
fledge_success_brood
Missing: Not collected
fledge_success_clutch
Missing: Not collected
fledging_date
Missing: Not collected
geo loc name
Spain:Hoya de Guadix
hatching_date
5/9/07
hatching_success
1
hatching_synchrony
asyn
host common name
Southern grey shrike
host scientific name
Passeriformes
host subject id
Alcaudon.Ci4.2
host taxid
219215
latitude
37.18823889
lay_date_juliane_days
Missing: Not provided
laying_date
Missing: Not provided
log_enterobacteriaceae_density
0.791577393
log_enterococcus_density
0.313936801
log_mesophiles_density
9.558685076
log_rel_growth_enterobact
-4.913236575
log_rel_growth_enterococcus
0.313936801
log_rel_growth_mesophiles
3.916018882
log_rel_growth_staphylococcus
0
log_staphylococcus_density
0
longitude
-2.956325
mesophiles_density
3619804172
nest_type
open
number_fledging
Missing: Not provided
number_sampled_eggs
6
observer
Lies
physical_location_1
U Granada
physical_specimen_location
CCME
physical_specimen_remaining
TRUE
plants
TRUE
platero_plates
P3A05
public
TRUE
rel_growth_enterobacteriaceae
-0.999987789
rel_growth_enterococcus
1.06033007
rel_growth_staphylococcus
0
relative_growth_mesophiles
8240.739479
required_sample_info_status
completed
sample name
qiita_sid_1632:1632.E3B07.r.EMPbird.v4.NoIndex.L001
sample type
bird egg shell
sample_nest
Alcaudon.Ci4.2
sample_progress
sequenced (16S)
sampling time
2
sampling_code_id
273
species name
Lanius meridionalis
staphylococcus_density
0
storing_days
3
unhatched_eggs
0
year
2007