1632.E5B03.Knight16sV4.JuannaBirdEMP.NoIndex.L005.R1.001.sequences; Bird Egg Shells from Spain
bird metagenome
Bird Egg Shells from nest Crialo.UTG1B.1
ENA first public
2016-07-13
ENA last update
2016-07-13
External Id
SAMEA4076477
INSDC center alias
UCSDMI
INSDC center name
University of California San Diego Microbiome Initiative
INSDC first public
2016-07-13T17:01:27Z
INSDC last update
2016-07-13T01:15:10Z
INSDC status
public
Submitter Id
qiita_sid_1632:1632.E5B03.Knight16sV4.JuannaBirdEMP.NoIndex.L005.R1.001.sequences
abandoned
No
altitude
0
anonymized name
E5B03
arcsine_fledge_success_brood
0.100167421
arcsine_fledge_success_clutch
0.100167421
arcsine_hatching_success
Missing: Not collected
area
Torre Guajar
assigned_from_geo
TRUE
backup
TRUE
bird_family
Cuculidae
bird_order
Cuculiformes
broken_eggs
0
brood_size
1
clutch_size
1
code_id_statistica
255
coll_date_juliane_days
137
collection date
5/18/07 0:00
collection_timestamp
5/18/07
comments_in_spanish
Lies tiene la ultima toma del pollo
common name
organismal metagenome
country
GAZ:Spain
country_nation
Spain
country_region
Hoya de Guadix
culturing_date
5/24/07
depth
0
dna_extracted
TRUE
elevation
1039
empo_0
EMP sample
empo_1
Host-associated
empo_2
Animal
empo_3
Animal surface
enterobacteriaceae_density
1.594683337
enterococcus_density
0
env biome
mediterranean shrubland biome
env feature
nest of bird
env matter
egg
env package
host-associated
eppendorf_name
UTG 1B.3
estefania_plates
5B03
extracted DNA avail now
TRUE
feathers
FALSE
fledge_success_brood
1
fledge_success_clutch
1
fledging_date
7/9/07
geo loc name
Spain:Hoya de Guadix
hatching_date
5/27/07
hatching_success
Missing: Not collected
hatching_synchrony
asyn
host common name
Great-spotted cuckoo
host scientific name
Cuculiformes
host subject id
Crialo.UTG1B.1
host taxid
78203
latitude
37.38953889
lay_date_juliane_days
131
laying_date
8/10/07
log_enterobacteriaceae_density
0.414084363
log_enterococcus_density
0
log_mesophiles_density
1.255512642
log_rel_growth_enterobact
-0.414084363
log_rel_growth_enterococcus
0.301029996
log_rel_growth_mesophiles
5.646131873
log_rel_growth_staphylococcus
0
log_staphylococcus_density
0
longitude
-3.098552778
mesophiles_density
17.0099556
nest_type
open
number_fledging
1
number_sampled_eggs
1
observer
Juanma
physical_specimen_location
CCME
physical_specimen_remaining
TRUE
plants
TRUE
platero_plates
P4G01
predated
No
public
TRUE
rel_growth_enterobacteriaceae
-0.614596515
rel_growth_enterococcus
1
rel_growth_staphylococcus
0
relative_growth_mesophiles
442721.7843
required_sample_info_status
completed
sample name
qiita_sid_1632:1632.E5B03.Knight16sV4.JuannaBirdEMP.NoIndex.L005.R1.001.sequences
sample type
bird egg shell
sample_nest
Crialo.UTG1B.1
sample_progress
sequenced (16S)
sampling time
1
sampling_code_id
388
species name
Clamator glandarius
staphylococcus_density
0
storing_days
6
unhatched_eggs
0
year
2007