Bird Egg Shells from Spain; 1632.E3A11.Knight16sV4.JuannaBirdEMP.NoIndex.L005.R1.001.sequences
bird metagenome
Bird Egg Shells from nest Crialo.UCON4.2
ENA first public
2016-07-13
ENA last update
2016-07-13
External Id
SAMEA4076250
INSDC center alias
UCSDMI
INSDC center name
University of California San Diego Microbiome Initiative
INSDC first public
2016-07-13T17:01:27Z
INSDC last update
2016-07-13T01:15:03Z
INSDC status
public
Submitter Id
qiita_sid_1632:1632.E3A11.Knight16sV4.JuannaBirdEMP.NoIndex.L005.R1.001.sequences
abandoned
No
altitude
0
anonymized name
E3A11
arcsine_fledge_success_brood
0.100167421
arcsine_fledge_success_clutch
0.100167421
arcsine_hatching_success
Missing: Not collected
area
Cortijo Conejo
assigned_from_geo
TRUE
backup
FALSE
bird_family
Cuculidae
bird_order
Cuculiformes
broken_eggs
0
brood_size
3
clutch_size
3
code_id_statistica
249
coll_date_juliane_days
125
collection date
5/6/07 0:00
collection_timestamp
5/6/07
common name
organismal metagenome
country
GAZ:Spain
country_nation
Spain
country_region
Hoya de Guadix
culturing_date
5/12/07
depth
0
dna_extracted
TRUE
elevation
1055
empo_0
EMP sample
empo_1
Host-associated
empo_2
Animal
empo_3
Animal surface
enterobacteriaceae_density
337931.1166
enterococcus_density
8.146213576
env biome
mediterranean shrubland biome
env feature
nest of bird
env matter
egg
env package
host-associated
eppendorf_name
UCON 4.4
estefania_plates
3A11
extracted DNA avail now
TRUE
feathers
FALSE
fledge_success_brood
1
fledge_success_clutch
1
fledging_date
5/26/07
geo loc name
Spain:Hoya de Guadix
hatching_date
5/11/07
hatching_success
Missing: Not collected
hatching_synchrony
asyn
host common name
Great-spotted cuckoo
host scientific name
Cuculiformes
host subject id
Crialo.UCON4.2
host taxid
78203
latitude
37.40583611
lay_date_juliane_days
113
laying_date
7/23/07
log_enterobacteriaceae_density
5.528829468
log_enterococcus_density
0.961241339
log_mesophiles_density
5.83450372
log_rel_growth_enterobact
-2.385624211
log_rel_growth_enterococcus
-3.164984192
log_rel_growth_mesophiles
-1.383852938
log_rel_growth_staphylococcus
0
log_staphylococcus_density
0
longitude
-3.082122222
mesophiles_density
683129.569
nest_type
open
number_fledging
3
number_sampled_eggs
3
observer
Juanma
physical_location_1
U Granada
physical_specimen_location
CCME
physical_specimen_remaining
TRUE
plants
TRUE
platero_plates
P3C012
predated
No
public
TRUE
rel_growth_enterobacteriaceae
-0.995884944
rel_growth_enterococcus
-0.999316063
rel_growth_staphylococcus
0
relative_growth_mesophiles
-0.958681261
required_sample_info_status
completed
sample name
qiita_sid_1632:1632.E3A11.Knight16sV4.JuannaBirdEMP.NoIndex.L005.R1.001.sequences
sample type
bird egg shell
sample_nest
Crialo.UCON4.2
sample_progress
sequenced (16S)
sampling time
2
sampling_code_id
304
species name
Clamator glandarius
staphylococcus_density
0
storing_days
6
unhatched_eggs
0
year
2007