1632.E6A03.Knight16sV4.JuannaBirdEMP.NoIndex.L005.R1.001.sequences; Bird Egg Shells from Spain
bird metagenome
Bird Egg Shells from nest Crialo.Ma27.1
ENA first public
2016-07-13
ENA last update
2016-07-13
External Id
SAMEA4076568
INSDC center alias
UCSDMI
INSDC center name
University of California San Diego Microbiome Initiative
INSDC first public
2016-07-13T17:01:27Z
INSDC last update
2016-07-13T01:15:13Z
INSDC status
public
Submitter Id
qiita_sid_1632:1632.E6A03.Knight16sV4.JuannaBirdEMP.NoIndex.L005.R1.001.sequences
abandoned
No
altitude
0
anonymized name
E6A03
arcsine_fledge_success_brood
0.100167421
arcsine_fledge_success_clutch
0.100167421
arcsine_hatching_success
Missing: Not collected
area
Sierra Maria
assigned_from_geo
TRUE
backup
TRUE
bird_family
Cuculidae
bird_order
Cuculiformes
broken_eggs
0
brood_size
1
clutch_size
1
code_id_statistica
237
coll_date_juliane_days
119
collection date
4/30/07 0:00
collection_timestamp
4/30/07
common name
organismal metagenome
country
GAZ:Spain
country_nation
Spain
country_region
Hoya de Guadix
culturing_date
5/11/07
depth
0
dna_extracted
TRUE
elevation
1199
empo_0
EMP sample
empo_1
Host-associated
empo_2
Animal
empo_3
Animal surface
enterobacteriaceae_density
0
enterococcus_density
0
env biome
mediterranean shrubland biome
env feature
nest of bird
env matter
egg
env package
host-associated
eppendorf_name
Ma27c
estefania_plates
6A03
extracted DNA avail now
TRUE
feathers
FALSE
fledge_success_brood
1
fledge_success_clutch
1
fledging_date
5/17/07
geo loc name
Spain:Hoya de Guadix
hatching_date
5/12/07
hatching_success
Missing: Not collected
hatching_synchrony
asyn
host common name
Great-spotted cuckoo
host scientific name
Cuculiformes
host subject id
Crialo.Ma27.1
host taxid
78203
latitude
37.71095556
lay_date_juliane_days
116
laying_date
7/26/07
log_enterobacteriaceae_density
0
log_enterococcus_density
0
log_mesophiles_density
0
log_rel_growth_enterobact
0
log_rel_growth_enterococcus
0.301029996
log_rel_growth_mesophiles
0
log_rel_growth_staphylococcus
0.166522296
log_staphylococcus_density
0
longitude
-2.164844444
mesophiles_density
0
nest_type
open
number_fledging
1
number_sampled_eggs
1
observer
David
physical_specimen_location
CCME
physical_specimen_remaining
TRUE
plants
TRUE
platero_plates
P5G08
predated
No
public
TRUE
rel_growth_enterobacteriaceae
0
rel_growth_enterococcus
1
rel_growth_staphylococcus
0.467311415
relative_growth_mesophiles
0
required_sample_info_status
completed
sample name
qiita_sid_1632:1632.E6A03.Knight16sV4.JuannaBirdEMP.NoIndex.L005.R1.001.sequences
sample type
bird egg shell
sample_nest
Crialo.Ma27.1
sample_progress
sequenced (16S)
sampling time
1
sampling_code_id
259
species name
Clamator glandarius
staphylococcus_density
0
storing_days
11
unhatched_eggs
0
year
2007