1632.E3H01.Knight16sV4.JuannaBirdEMP.NoIndex.L005.R1.001.sequences; Bird Egg Shells from Spain
bird metagenome
Bird Egg Shells from nest Collalbanegra.Col1.1
ENA first public
2016-07-13
ENA last update
2016-07-13
External Id
SAMEA4076343
INSDC center alias
UCSDMI
INSDC center name
University of California San Diego Microbiome Initiative
INSDC first public
2016-07-13T17:01:27Z
INSDC last update
2016-07-13T01:15:06Z
INSDC status
public
Submitter Id
qiita_sid_1632:1632.E3H01.Knight16sV4.JuannaBirdEMP.NoIndex.L005.R1.001.sequences
abandoned
No
altitude
0
anonymized name
E3H01
arcsine_fledge_success_brood
Missing: Not collected
arcsine_fledge_success_clutch
Missing: Not collected
arcsine_hatching_success
Missing: Not collected
area
Fuentealamo
assigned_from_geo
TRUE
backup
FALSE
bird_family
Muscicapidae
bird_order
Passeriformes
broken_eggs
Missing: Not collected
brood_size
Missing: Not collected
clutch_size
4
code_id_statistica
183
coll_date_juliane_days
124
collection date
5/5/07 0:00
collection_timestamp
5/5/07
comments_in_spanish
Depredado
common name
organismal metagenome
country
GAZ:Spain
country_nation
Spain
country_region
Hoya de Guadix
culturing_date
5/6/07
depth
0
dna_extracted
TRUE
elevation
1145
empo_0
EMP sample
empo_1
Host-associated
empo_2
Animal
empo_3
Animal surface
enterobacteriaceae_density
9978549.904
enterococcus_density
2.363340767
env biome
mediterranean shrubland biome
env feature
nest of bird
env matter
egg
env package
host-associated
eppendorf_name
COL 1.1
estefania_plates
3H01
extracted DNA avail now
TRUE
feathers
TRUE
fledge_success_brood
Missing: Not collected
fledge_success_clutch
Missing: Not collected
fledging_date
Missing: Not collected
geo loc name
Spain:Hoya de Guadix
hatching_date
Missing: Not collected
hatching_success
Missing: Not collected
hatching_synchrony
asyn
host common name
Black weathear
host scientific name
Passeriformes
host subject id
Collalbanegra.Col1.1
host taxid
391703
latitude
37.34600556
lay_date_juliane_days
119
laying_date
7/29/07
log_enterobacteriaceae_density
6.999067477
log_enterococcus_density
0.526770871
log_mesophiles_density
9.896405092
log_rel_growth_enterobact
0.265314424
log_rel_growth_enterococcus
-0.120730055
log_rel_growth_mesophiles
-3.999999449
log_rel_growth_staphylococcus
-0.183323048
log_staphylococcus_density
0.183323048
longitude
-3.061197222
mesophiles_density
7877802556
nest_type
hole
number_fledging
Missing: Not provided
number_sampled_eggs
4
observer
Juanma
physical_specimen_location
CCME
physical_specimen_remaining
TRUE
plants
FALSE
platero_plates
P2G09
predated
egg phase
public
TRUE
rel_growth_enterobacteriaceae
0.842105179
rel_growth_enterococcus
-0.242696533
rel_growth_staphylococcus
-0.344342624
relative_growth_mesophiles
-0.9999
required_sample_info_status
completed
sample name
qiita_sid_1632:1632.E3H01.Knight16sV4.JuannaBirdEMP.NoIndex.L005.R1.001.sequences
sample type
bird egg shell
sample_nest
Collalbanegra.Col1.1
sample_progress
sequenced (16S)
sampling time
1
sampling_code_id
212
species name
Oenanthe leucura
staphylococcus_density
0.525186837
storing_days
1
unhatched_eggs
Missing: Not provided
year
2007