Bird Egg Shells from Spain; 1632.E1E01.Knight16sV4.JuannaBirdEMP.NoIndex.L005.R1.001.sequences
bird metagenome
Bird Egg Shells from nest Chova.Cho3.1
ENA first public
2016-07-13
ENA last update
2016-07-13
External Id
SAMEA4076084
INSDC center alias
UCSDMI
INSDC center name
University of California San Diego Microbiome Initiative
INSDC first public
2016-07-13T17:01:27Z
INSDC last update
2016-07-13T01:14:58Z
INSDC status
public
Submitter Id
qiita_sid_1632:1632.E1E01.Knight16sV4.JuannaBirdEMP.NoIndex.L005.R1.001.sequences
abandoned
No
altitude
0
anonymized name
E1E01
arcsine_fledge_success_brood
0.100167421
arcsine_fledge_success_clutch
0.089562407
arcsine_hatching_success
1.107148718
area
Fuentealamo
assigned_from_geo
TRUE
backup
FALSE
bird_family
Corvidae
bird_order
Passeriformes
broken_eggs
0
brood_size
4
clutch_size
5
code_id_statistica
170
coll_date_juliane_days
90
collection date
4/1/07 0:00
collection_timestamp
4/1/07
common name
organismal metagenome
country
GAZ:Spain
country_nation
Spain
country_region
Hoya de Guadix
culturing_date
4/3/07
depth
0
dna_extracted
TRUE
elevation
1145
empo_0
EMP sample
empo_1
Host-associated
empo_2
Animal
empo_3
Animal surface
enterobacteriaceae_density
2.147598009
enterococcus_density
0.076699929
env biome
mediterranean shrubland biome
env feature
nest of bird
env matter
egg
env package
host-associated
eppendorf_name
CHO 3.1
estefania_plates
1.00E+01
extracted DNA avail now
TRUE
feathers
FALSE
fledge_success_brood
1
fledge_success_clutch
0.8
fledging_date
5/10/07
geo loc name
Spain:Hoya de Guadix
hatching_date
4/13/07
hatching_success
0.8
hatching_synchrony
asyn
host common name
Red-billed chough
host scientific name
Passeriformes
host subject id
Chova.Cho3.1
host taxid
56790
latitude
37.34600556
lay_date_juliane_days
79
laying_date
6/19/07
log_enterobacteriaceae_density
0.497979262
log_enterococcus_density
0.032094684
log_mesophiles_density
2.529532611
log_rel_growth_enterobact
0.22590278
log_rel_growth_enterococcus
0.268935311
log_rel_growth_mesophiles
-1.448733387
log_rel_growth_staphylococcus
-0.878161075
log_staphylococcus_density
0.910255759
longitude
-3.061197222
mesophiles_density
337.4796872
nest_type
hole
number_fledging
4
number_sampled_eggs
5
observer
Juanma
physical_location_1
U Granada
physical_specimen_location
CCME
physical_specimen_remaining
TRUE
plants
TRUE
platero_plates
P1A05
predated
No
public
TRUE
rel_growth_enterobacteriaceae
0.682297423
rel_growth_enterococcus
0.857527753
rel_growth_staphylococcus
-0.867614956
relative_growth_mesophiles
-0.964415029
required_sample_info_status
completed
sample name
qiita_sid_1632:1632.E1E01.Knight16sV4.JuannaBirdEMP.NoIndex.L005.R1.001.sequences
sample type
bird egg shell
sample_nest
Chova.Cho3.1
sample_progress
sequenced (16S)
sampling time
1
sampling_code_id
6
species name
Pyrrhocorax phyrrhocorax
staphylococcus_density
7.133093389
storing_days
2
unhatched_eggs
1
year
2007