1632.E2F04.r.EMPbird.v4.NoIndex.L001; Bird Egg Shells from Spain
bird metagenome
Bird Egg Shells from nest Mirlo.MirloJuan.1
ENA first public
2016-07-13
ENA last update
2016-07-13
External Id
SAMEA4076205
INSDC center alias
UCSDMI
INSDC center name
University of California San Diego Microbiome Initiative
INSDC first public
2016-07-13T17:01:27Z
INSDC last update
2016-07-13T01:15:01Z
INSDC status
public
Submitter Id
qiita_sid_1632:1632.E2F04.r.EMPbird.v4.NoIndex.L001
abandoned
No
altitude
0
anonymized name
E2F04
arcsine_fledge_success_brood
Missing: Not collected
arcsine_fledge_success_clutch
Missing: Not collected
arcsine_hatching_success
Missing: Not collected
area
Ogijares
assigned_from_geo
TRUE
backup
FALSE
bird_family
Turdidae
bird_order
Passeriformes
broken_eggs
Missing: Not collected
brood_size
Missing: Not collected
clutch_size
8
code_id_statistica
412
coll_date_juliane_days
111
collection date
4/22/07 0:00
collection_timestamp
4/22/07
comments_in_spanish
Ddepredado
common name
organismal metagenome
country
GAZ:Spain
country_nation
Spain
country_region
Hoya de Guadix
culturing_date
5/1/07
depth
0
dna_extracted
TRUE
elevation
701
empo_0
EMP sample
empo_1
Host-associated
empo_2
Animal
empo_3
Animal surface
enterobacteriaceae_density
35032744.76
enterococcus_density
8627.466993
env biome
mediterranean shrubland biome
env feature
nest of bird
env matter
egg
env package
host-associated
eppendorf_name
MIRLO JUAN
estefania_plates
2F04
extracted DNA avail now
TRUE
feathers
FALSE
fledge_success_brood
Missing: Not collected
fledge_success_clutch
Missing: Not collected
fledging_date
Missing: Not collected
geo loc name
Spain:Hoya de Guadix
hatching_date
Missing: Not collected
hatching_success
Missing: Not collected
hatching_synchrony
asyn
host common name
Blackbird
host scientific name
Passeriformes
host subject id
Mirlo.MirloJuan.1
host taxid
9187
latitude
37.12272222
lay_date_juliane_days
122
laying_date
8/1/07
log_enterobacteriaceae_density
7.544474177
log_enterococcus_density
3.935933642
log_mesophiles_density
7.346788312
log_rel_growth_enterobact
-2.979046746
log_rel_growth_enterococcus
-3.633427811
log_rel_growth_mesophiles
-0.461457297
log_rel_growth_staphylococcus
-0.654990589
log_staphylococcus_density
1.437834208
longitude
-3.618477778
mesophiles_density
22222263.47
nest_type
open
number_fledging
Missing: Not provided
number_sampled_eggs
8
observer
Juan
physical_location_1
U Granada
physical_specimen_location
CCME
physical_specimen_remaining
TRUE
plants
TRUE
predated
egg phase
public
TRUE
rel_growth_enterobacteriaceae
-0.998950571
rel_growth_enterococcus
-0.99976742
rel_growth_staphylococcus
-0.778685733
relative_growth_mesophiles
-0.654424693
required_sample_info_status
completed
sample name
qiita_sid_1632:1632.E2F04.r.EMPbird.v4.NoIndex.L001
sample type
bird egg shell
sample_nest
Mirlo.MirloJuan.1
sample_progress
sequenced (16S)
sampling time
1
sampling_code_id
112
species name
Turdus merula
staphylococcus_density
26.40527777
storing_days
9
unhatched_eggs
Missing: Not provided
year
2007