1632.E2H02.Knight16sV4.JuannaBirdEMP.NoIndex.L005.R1.001.sequences; Bird Egg Shells from Spain
bird metagenome
Bird Egg Shells from nest Estornino.32.1
ENA first public
2016-07-13
ENA last update
2016-07-13
External Id
SAMEA4076227
INSDC center alias
UCSDMI
INSDC center name
University of California San Diego Microbiome Initiative
INSDC first public
2016-07-13T17:01:26Z
INSDC last update
2016-07-13T01:15:02Z
INSDC status
public
Submitter Id
qiita_sid_1632:1632.E2H02.Knight16sV4.JuannaBirdEMP.NoIndex.L005.R1.001.sequences
abandoned
No
altitude
0
anonymized name
E2H02
arcsine_fledge_success_brood
0.089562407
arcsine_fledge_success_clutch
0.089562407
arcsine_hatching_success
1.570796327
area
Benalua
assigned_from_geo
TRUE
backup
FALSE
bird_family
Sturnidae
bird_order
Passeriformes
broken_eggs
0
brood_size
5
clutch_size
5
code_id_statistica
262
coll_date_juliane_days
111
collection date
4/22/07 0:00
collection_timestamp
4/22/07
common name
organismal metagenome
country
GAZ:Spain
country_nation
Spain
country_region
Hoya de Guadix
culturing_date
5/1/07
depth
0
dna_extracted
TRUE
elevation
907
empo_0
EMP sample
empo_1
Host-associated
empo_2
Animal
empo_3
Animal surface
enterobacteriaceae_density
235641.2475
enterococcus_density
197.3644966
env biome
mediterranean shrubland biome
env feature
nest of bird
env matter
egg
env package
host-associated
eppendorf_name
32.1
estefania_plates
2H02
extracted DNA avail now
TRUE
feathers
TRUE
fledge_success_brood
0.8
fledge_success_clutch
0.8
fledging_date
5/16/07
geo loc name
Spain:Hoya de Guadix
hatching_date
4/29/07
hatching_success
1
hatching_synchrony
syn
host common name
Sptoless starling
host scientific name
Passeriformes
host subject id
Estornino.32.1
host taxid
381112
latitude
37.32783056
lay_date_juliane_days
100
laying_date
7/10/07
log_enterobacteriaceae_density
5.372253156
log_enterococcus_density
2.297463944
log_mesophiles_density
7.223913149
log_rel_growth_enterobact
-4.722059269
log_rel_growth_enterococcus
-1.992126376
log_rel_growth_mesophiles
2.330993193
log_rel_growth_staphylococcus
0.093151811
log_staphylococcus_density
0
longitude
-3.138858333
mesophiles_density
16746078.5
nest_type
hole
number_fledging
4
number_sampled_eggs
5
observer
Juanma
physical_location_1
U Granada
physical_specimen_location
CCME
physical_specimen_remaining
TRUE
plants
TRUE
platero_plates
P1H09
predated
No
public
TRUE
rel_growth_enterobacteriaceae
-0.999981036
rel_growth_enterococcus
-0.98981705
rel_growth_staphylococcus
0.239229693
relative_growth_mesophiles
213.2857015
required_sample_info_status
completed
sample name
qiita_sid_1632:1632.E2H02.Knight16sV4.JuannaBirdEMP.NoIndex.L005.R1.001.sequences
sample type
bird egg shell
sample_nest
Estornino.32.1
sample_progress
sequenced (16S)
sampling time
1
sampling_code_id
106
species name
Sturnus unicolor
staphylococcus_density
0
storing_days
9
unhatched_eggs
0
year
2007