Raised bog bacteria
uncultured bacterium
Bacterial community in the peat column of a northern raised bog
ENA first public
2014-09-27
ENA last update
2016-10-21
External Id
SAMEA2674935
INSDC center alias
VTT
INSDC center name
VTT Technical Research Centre of Finland
INSDC first public
2014-09-27T17:04:04Z
INSDC last update
2016-10-21T09:33:22Z
INSDC status
public
Submitter Id
Clay-650-700cm-B
annotation source
GreeneGenes
collection date
2013-06-15
current land use
Natura 2000 and National Mire Conservation Programme
current vegetation
cotton grass (Eriophorum vaginatum), heather, cloudberry, cranberry, Sphagnum fuscum, bog rosemary, bog bilberry, crowberry, Cladina stellari, Cladonia sp., Cetraria islandica and Dicranum sp.
depth
6.5
environment (biome)
raised bog
environment (feature)
bog core
environment (material)
clay
geographic location (country and/or sea)
Finland
geographic location (elevation)
44
geographic location (latitude)
61.291912
geographic location (longitude)
21.839473
geographic location (region and locality)
Lastensuo
investigation type
metagenome
pcr primers
AGAGTTTGATCCTGGCTCAG, ATTACCGCGGCTGCTGG
ph
5.3
project name
Raised bog bacteria
sample collection device or method
15 cm diameter peat auger
sample material processing
freezing in sterile 50 ml plastic test tubes
sample name
Clay-650-700cm-B
sample volume or weight for DNA extraction
0.50
sequencing method
454
soil environmental package
soil
total organic C method
loss on ignition
total organic carbon
0
water content
0.73