1632.E1F03.Knight16sV4.JuannaBirdEMP.NoIndex.L005.R1.001.sequences; Bird Egg Shells from Spain
bird metagenome
Bird Egg Shells from nest Corneja.Cor51.1
ENA first public
2016-07-13
ENA last update
2016-07-13
External Id
SAMEA4076098
INSDC center alias
UCSDMI
INSDC center name
University of California San Diego Microbiome Initiative
INSDC first public
2016-07-13T17:01:27Z
INSDC last update
2016-07-13T01:14:58Z
INSDC status
public
Submitter Id
qiita_sid_1632:1632.E1F03.Knight16sV4.JuannaBirdEMP.NoIndex.L005.R1.001.sequences
abandoned
No
altitude
0
anonymized name
E1F03
arcsine_fledge_success_brood
Missing: Not collected
arcsine_fledge_success_clutch
Missing: Not collected
arcsine_hatching_success
Missing: Not collected
area
Cortijo Perro
assigned_from_geo
TRUE
backup
FALSE
bird_family
Corvidae
bird_order
Passeriformes
broken_eggs
Missing: Not collected
brood_size
Missing: Not collected
clutch_size
5
code_id_statistica
212
coll_date_juliane_days
100
collection date
4/11/07 0:00
collection_timestamp
4/11/07
comments_in_spanish
Depredado
common name
organismal metagenome
country
GAZ:Spain
country_nation
Spain
country_region
Hoya de Guadix
culturing_date
4/11/07
depth
0
dna_extracted
TRUE
elevation
1160
empo_0
EMP sample
empo_1
Host-associated
empo_2
Animal
empo_3
Animal surface
enterobacteriaceae_density
0.089435285
enterococcus_density
1341529.27
env biome
mediterranean shrubland biome
env feature
nest of bird
env matter
egg
env package
host-associated
eppendorf_name
COR 51.1
estefania_plates
1F03
extracted DNA avail now
TRUE
feathers
TRUE
fledge_success_brood
Missing: Not collected
fledge_success_clutch
Missing: Not collected
fledging_date
Missing: Not collected
geo loc name
Spain:Hoya de Guadix
hatching_date
Missing: Not collected
hatching_success
Missing: Not collected
hatching_synchrony
asyn
host common name
Carrion crow
host scientific name
Passeriformes
host subject id
Corneja.Cor51.1
host taxid
181097
latitude
37.32654722
lay_date_juliane_days
Missing: Not provided
laying_date
Missing: Not provided
log_enterobacteriaceae_density
0.037201437
log_enterococcus_density
6.127600477
log_mesophiles_density
6.127600477
log_rel_growth_enterobact
6.971212351
log_rel_growth_enterococcus
-5.549964768
log_rel_growth_mesophiles
2.08635951
log_rel_growth_staphylococcus
0
log_staphylococcus_density
0
longitude
-3.059219444
mesophiles_density
1341529.27
nest_type
open
number_fledging
Missing: Not provided
number_sampled_eggs
5
observer
Juanma
physical_location_1
U Granada
physical_specimen_location
CCME
physical_specimen_remaining
TRUE
plants
TRUE
platero_plates
P1C02
predated
egg phase
public
TRUE
rel_growth_enterobacteriaceae
9358630.575
rel_growth_enterococcus
-0.999997181
rel_growth_staphylococcus
0
relative_growth_mesophiles
120.9999098
required_sample_info_status
completed
sample name
qiita_sid_1632:1632.E1F03.Knight16sV4.JuannaBirdEMP.NoIndex.L005.R1.001.sequences
sample type
bird egg shell
sample_nest
Corneja.Cor51.1
sample_progress
sequenced (16S)
sampling time
1
sampling_code_id
28
species name
Corvus corone
staphylococcus_density
0
storing_days
0
unhatched_eggs
Missing: Not provided
year
2007