1632.E6G09.Knight16sV4.JuannaBirdEMP.NoIndex.L005.R1.001.sequences; Bird Egg Shells from Spain
bird metagenome
Bird Egg Shells from nest Estornino.E32.2
ENA first public
2016-07-13
ENA last update
2016-07-13
External Id
SAMEA4076632
INSDC center alias
UCSDMI
INSDC center name
University of California San Diego Microbiome Initiative
INSDC first public
2016-07-13T17:01:27Z
INSDC last update
2016-07-13T01:15:15Z
INSDC status
public
Submitter Id
qiita_sid_1632:1632.E6G09.Knight16sV4.JuannaBirdEMP.NoIndex.L005.R1.001.sequences
altitude
0
anonymized name
E6G09
arcsine_fledge_success_brood
Missing: Not collected
arcsine_fledge_success_clutch
Missing: Not collected
arcsine_hatching_success
Missing: Not collected
area
Calahorra
assigned_from_geo
TRUE
backup
TRUE
bird_family
Sturnidae
bird_order
Passeriformes
broken_eggs
Missing: Not collected
brood_size
Missing: Not collected
clutch_size
7
code_id_statistica
273
coll_date_juliane_days
161
collection date
6/11/07 0:00
collection_timestamp
6/11/07
common name
organismal metagenome
country
GAZ:Spain
country_nation
Spain
country_region
Hoya de Guadix
culturing_date
6/26/07
depth
0
dna_extracted
TRUE
elevation
1106
empo_0
EMP sample
empo_1
Host-associated
empo_2
Animal
empo_3
Animal surface
enterobacteriaceae_density
122778.4575
enterococcus_density
1
env biome
mediterranean shrubland biome
env feature
nest of bird
env matter
egg
env package
host-associated
eppendorf_name
St.32
estefania_plates
6G09
extracted DNA avail now
TRUE
feathers
TRUE
fledge_success_brood
Missing: Not collected
fledge_success_clutch
Missing: Not collected
fledging_date
Missing: Not collected
geo loc name
Spain:Hoya de Guadix
hatching_date
Missing: Not collected
hatching_success
Missing: Not collected
hatching_synchrony
syn
host common name
Sptoless starling
host scientific name
Passeriformes
host subject id
Estornino.E32.2
host taxid
381112
latitude
37.25371111
lay_date_juliane_days
150
laying_date
8/29/07
log_enterobacteriaceae_density
5.08912571
log_enterococcus_density
0.301029996
log_mesophiles_density
6.192106613
log_rel_growth_enterobact
-1.896926186
log_rel_growth_enterococcus
-4.696506041
log_rel_growth_mesophiles
-0.357511195
log_rel_growth_staphylococcus
0
log_staphylococcus_density
0
longitude
-3.029825
mesophiles_density
1556346.644
nest_type
hole
number_fledging
Missing: Not provided
number_sampled_eggs
7
observer
Carlos
physical_specimen_location
CCME
physical_specimen_remaining
TRUE
plants
TRUE
platero_plates
P6D06
public
TRUE
rel_growth_enterobacteriaceae
-0.987321327
rel_growth_enterococcus
-0.999979886
rel_growth_staphylococcus
0
relative_growth_mesophiles
-0.560975452
required_sample_info_status
completed
sample name
qiita_sid_1632:1632.E6G09.Knight16sV4.JuannaBirdEMP.NoIndex.L005.R1.001.sequences
sample type
bird egg shell
sample_nest
Estornino.E32.2
sample_progress
sequenced (16S)
sampling time
2
sampling_code_id
581
species name
Sturnus unicolor
staphylococcus_density
0
storing_days
15
unhatched_eggs
Missing: Not provided
year
2007