1632.E3H02.r.EMPbird.v4.NoIndex.L001; Bird Egg Shells from Spain
bird metagenome
Bird Egg Shells from nest Urraca.cc17c.2
ENA first public
2016-07-13
ENA last update
2016-07-13
External Id
SAMEA4076345
INSDC center alias
UCSDMI
INSDC center name
University of California San Diego Microbiome Initiative
INSDC first public
2016-07-13T17:01:27Z
INSDC last update
2016-07-13T01:15:06Z
INSDC status
public
Submitter Id
qiita_sid_1632:1632.E3H02.r.EMPbird.v4.NoIndex.L001
altitude
0
anonymized name
E3H02
arcsine_fledge_success_brood
Missing: Not collected
arcsine_fledge_success_clutch
Missing: Not collected
arcsine_hatching_success
Missing: Not collected
area
Charches
assigned_from_geo
TRUE
backup
FALSE
bird_family
Corvidae
bird_order
Passeriformes
broken_eggs
Missing: Not collected
brood_size
Missing: Not collected
clutch_size
6
code_id_statistica
473
coll_date_juliane_days
124
collection date
5/5/07 0:00
collection_timestamp
5/5/07
comments_in_spanish
Sin datos de los pollos
common name
organismal metagenome
country
GAZ:Spain
country_nation
Spain
country_region
Hoya de Guadix
culturing_date
5/20/07
depth
0
dna_extracted
TRUE
elevation
1310
empo_0
EMP sample
empo_1
Host-associated
empo_2
Animal
empo_3
Animal surface
enterobacteriaceae_density
7067309.663
enterococcus_density
3.467949406
env biome
mediterranean shrubland biome
env feature
nest of bird
env matter
egg
env package
host-associated
eppendorf_name
CC17C.2
estefania_plates
3H02
extracted DNA avail now
TRUE
feathers
FALSE
fledge_success_brood
Missing: Not collected
fledge_success_clutch
Missing: Not collected
fledging_date
Missing: Not collected
geo loc name
Spain:Hoya de Guadix
hatching_date
5/11/07
hatching_success
Missing: Not collected
hatching_synchrony
asyn
host common name
Black-billed Magpie
host scientific name
Passeriformes
host subject id
Urraca.cc17c.2
host taxid
34924
latitude
37.28454722
lay_date_juliane_days
104
laying_date
7/14/07
log_enterobacteriaceae_density
6.849254182
log_enterococcus_density
0.650108247
log_mesophiles_density
6.978053324
log_rel_growth_enterobact
6.849254182
log_rel_growth_enterococcus
-1.317505137
log_rel_growth_mesophiles
5.321098861
log_rel_growth_staphylococcus
-0.051717908
log_staphylococcus_density
0
longitude
-2.985819444
mesophiles_density
9507214.19
nest_type
open
number_fledging
Missing: Not provided
number_sampled_eggs
6
observer
Juan
physical_specimen_location
CCME
physical_specimen_remaining
TRUE
plants
TRUE
platero_plates
P2H06
public
TRUE
rel_growth_enterobacteriaceae
7067309.663
rel_growth_enterococcus
-0.951861244
rel_growth_staphylococcus
-0.112267557
relative_growth_mesophiles
209457.9203
required_sample_info_status
completed
sample name
qiita_sid_1632:1632.E3H02.r.EMPbird.v4.NoIndex.L001
sample type
bird egg shell
sample_nest
Urraca.cc17c.2
sample_progress
sequenced (16S)
sampling time
2
sampling_code_id
237
species name
Pica pica
staphylococcus_density
0
storing_days
15
unhatched_eggs
Missing: Not provided
year
2007