Bird Egg Shells from Spain; 1632.E1H05.Knight16sV4.JuannaBirdEMP.NoIndex.L005.R1.001.sequences
bird metagenome
Bird Egg Shells from nest Abubilla.714.2
ENA first public
2016-07-13
ENA last update
2016-07-13
External Id
SAMEA4076125
INSDC center alias
UCSDMI
INSDC center name
University of California San Diego Microbiome Initiative
INSDC first public
2016-07-13T17:01:27Z
INSDC last update
2016-07-13T01:14:59Z
INSDC status
public
Submitter Id
qiita_sid_1632:1632.E1H05.Knight16sV4.JuannaBirdEMP.NoIndex.L005.R1.001.sequences
abandoned
No
altitude
0
anonymized name
E1H05
arcsine_fledge_success_brood
0.100167421
arcsine_fledge_success_clutch
0.086711161
arcsine_hatching_success
1.209429203
area
Cortijo Perro
assigned_from_geo
TRUE
backup
FALSE
bird_family
Upuidae
bird_order
Upupiformes
broken_eggs
0
brood_size
7
clutch_size
8
code_id_statistica
28
coll_date_juliane_days
103
collection date
4/14/07 0:00
collection_timestamp
4/14/07
common name
organismal metagenome
country
GAZ:Spain
country_nation
Spain
country_region
Hoya de Guadix
culturing_date
4/14/07
depth
0
dna_extracted
TRUE
elevation
1160
empo_0
EMP sample
empo_1
Host-associated
empo_2
Animal
empo_3
Animal surface
enterobacteriaceae_density
3190527.522
enterococcus_density
3.6397817
env biome
mediterranean shrubland biome
env feature
nest of bird
env matter
egg
env package
host-associated
eppendorf_name
714.2
estefania_plates
1H05
extracted DNA avail now
TRUE
feathers
FALSE
fledge_success_brood
1
fledge_success_clutch
0.75
fledging_date
5/7/06
geo loc name
Spain:Hoya de Guadix
hatching_date
4/19/07
hatching_success
0.875
hatching_synchrony
asyn
host common name
Eurasian hoopoe
host scientific name
Upupiformes
host subject id
Abubilla.714.2
host taxid
57439
latitude
37.32654722
lay_date_juliane_days
83
laying_date
6/23/07
log_enterobacteriaceae_density
6.503862631
log_enterococcus_density
0.666497548
log_mesophiles_density
7.431452826
log_rel_growth_enterobact
5.095408271
log_rel_growth_enterococcus
-0.08722672
log_rel_growth_mesophiles
5.780603443
log_rel_growth_staphylococcus
-0.582373569
log_staphylococcus_density
1.434695097
longitude
-3.059219444
mesophiles_density
27005536.53
nest_type
hole
number_fledging
6
number_sampled_eggs
8
observer
Juanma
physical_location_1
U Granada
physical_specimen_location
CCME
physical_specimen_remaining
TRUE
plants
FALSE
platero_plates
P1D08
predated
No
public
TRUE
rel_growth_enterobacteriaceae
124567.5104
rel_growth_enterococcus
-0.181962373
rel_growth_staphylococcus
-0.738406812
relative_growth_mesophiles
603396.4121
required_sample_info_status
completed
sample name
qiita_sid_1632:1632.E1H05.Knight16sV4.JuannaBirdEMP.NoIndex.L005.R1.001.sequences
sample type
bird egg shell
sample_nest
Abubilla.714.2
sample_progress
sequenced (16S)
sampling time
2
sampling_code_id
47
species name
Upupa epops
staphylococcus_density
26.20790465
storing_days
0
unhatched_eggs
1
year
2007