1632.E6G03.Knight16sV4.JuannaBirdEMP.NoIndex.L005.R1.001.sequences; Bird Egg Shells from Spain
bird metagenome
Bird Egg Shells from nest Estornino.E74.2
ENA first public
2016-07-13
ENA last update
2016-07-13
External Id
SAMEA4076627
INSDC center alias
UCSDMI
INSDC center name
University of California San Diego Microbiome Initiative
INSDC first public
2016-07-13T17:01:27Z
INSDC last update
2016-07-13T01:15:15Z
INSDC status
public
Submitter Id
qiita_sid_1632:1632.E6G03.Knight16sV4.JuannaBirdEMP.NoIndex.L005.R1.001.sequences
altitude
0
anonymized name
E6G03
arcsine_fledge_success_brood
Missing: Not collected
arcsine_fledge_success_clutch
Missing: Not collected
arcsine_hatching_success
1.570796327
area
Calahorra
assigned_from_geo
TRUE
backup
TRUE
bird_family
Sturnidae
bird_order
Passeriformes
broken_eggs
0
brood_size
6
clutch_size
6
code_id_statistica
287
coll_date_juliane_days
156
collection date
6/6/07 0:00
collection_timestamp
6/6/07
common name
organismal metagenome
country
GAZ:Spain
country_nation
Spain
country_region
Hoya de Guadix
culturing_date
6/20/07
depth
0
dna_extracted
TRUE
elevation
1106
empo_0
EMP sample
empo_1
Host-associated
empo_2
Animal
empo_3
Animal surface
enterobacteriaceae_density
3530601.184
enterococcus_density
85.06193295
env biome
mediterranean shrubland biome
env feature
nest of bird
env matter
egg
env package
host-associated
eppendorf_name
StE 74
estefania_plates
6G02
extracted DNA avail now
TRUE
feathers
TRUE
fledge_success_brood
Missing: Not collected
fledge_success_clutch
Missing: Not collected
fledging_date
Missing: Not collected
geo loc name
Spain:Hoya de Guadix
hatching_date
6/10/07
hatching_success
1
hatching_synchrony
syn
host common name
Sptoless starling
host scientific name
Passeriformes
host subject id
Estornino.E74.2
host taxid
381112
latitude
37.25371111
lay_date_juliane_days
143
laying_date
8/22/07
log_enterobacteriaceae_density
6.547848786
log_enterococcus_density
1.934811096
log_mesophiles_density
6.809960659
log_rel_growth_enterobact
-0.248323592
log_rel_growth_enterococcus
0.690697617
log_rel_growth_mesophiles
-0.501316018
log_rel_growth_staphylococcus
-0.079813639
log_staphylococcus_density
0
longitude
-3.029825
mesophiles_density
6455956.451
nest_type
hole
number_fledging
Missing: Not provided
number_sampled_eggs
6
observer
Carlos
physical_specimen_location
CCME
physical_specimen_remaining
TRUE
plants
TRUE
platero_plates
P5F012
public
TRUE
rel_growth_enterobacteriaceae
-0.435483801
rel_growth_enterococcus
3.905661949
rel_growth_staphylococcus
-0.167879232
relative_growth_mesophiles
-0.684729031
required_sample_info_status
completed
sample name
qiita_sid_1632:1632.E6G03.Knight16sV4.JuannaBirdEMP.NoIndex.L005.R1.001.sequences
sample type
bird egg shell
sample_nest
Estornino.E74.2
sample_progress
sequenced (16S)
sampling time
2
sampling_code_id
555
species name
Sturnus unicolor
staphylococcus_density
0
storing_days
14
unhatched_eggs
0
year
2007