1632.E5E08.Knight16sV4.JuannaBirdEMP.NoIndex.L005.R1.001.sequences; Bird Egg Shells from Spain
bird metagenome
Bird Egg Shells from nest Cernicalo.Cer2.2
ENA first public
2016-07-13
ENA last update
2016-07-13
External Id
SAMEA4076522
INSDC center alias
UCSDMI
INSDC center name
University of California San Diego Microbiome Initiative
INSDC first public
2016-07-13T17:01:27Z
INSDC last update
2016-07-13T01:15:11Z
INSDC status
public
Submitter Id
qiita_sid_1632:1632.E5E08.Knight16sV4.JuannaBirdEMP.NoIndex.L005.R1.001.sequences
abandoned
No
altitude
0
anonymized name
E5E08
arcsine_fledge_success_brood
0.100167421
arcsine_fledge_success_clutch
0.100167421
arcsine_hatching_success
Missing: Not collected
area
Cortijo Bernabeles
assigned_from_geo
TRUE
backup
TRUE
bird_family
Falconidae
bird_order
Falconiformes
broken_eggs
Missing: Not collected
brood_size
Missing: Not collected
clutch_size
5
code_id_statistica
154
coll_date_juliane_days
157
collection date
6/7/07 0:00
collection_timestamp
6/7/07
common name
organismal metagenome
country
GAZ:Spain
country_nation
Spain
country_region
Hoya de Guadix
culturing_date
6/20/07
depth
0
dna_extracted
TRUE
elevation
1162
empo_0
EMP sample
empo_1
Host-associated
empo_2
Animal
empo_3
Animal surface
enterobacteriaceae_density
630258.3427
enterococcus_density
1.262607643
env biome
mediterranean shrubland biome
env feature
nest of bird
env matter
egg
env package
host-associated
eppendorf_name
CT cernicalo
estefania_plates
5.00E+08
extracted DNA avail now
TRUE
feathers
FALSE
fledge_success_brood
1
fledge_success_clutch
1
fledging_date
7/6/07
geo loc name
Spain:Hoya de Guadix
hatching_date
Missing: Not collected
hatching_success
Missing: Not collected
hatching_synchrony
asyn
host common name
Common kestrel
host scientific name
Falconiformes
host subject id
Cernicalo.Cer2.2
host taxid
100819
latitude
37.31399167
lay_date_juliane_days
133
laying_date
8/12/07
log_enterobacteriaceae_density
5.799519292
log_enterococcus_density
0.35460925
log_mesophiles_density
6.607633184
log_rel_growth_enterobact
1.524447485
log_rel_growth_enterococcus
-0.719783888
log_rel_growth_mesophiles
-0.693351326
log_rel_growth_staphylococcus
0.328722676
log_staphylococcus_density
0.387494916
longitude
-3.056652778
mesophiles_density
4051660.774
nest_type
hole
number_fledging
4
number_sampled_eggs
5
observer
Juanma
physical_specimen_location
CCME
physical_specimen_remaining
TRUE
plants
FALSE
platero_plates
P5B010
predated
No
public
TRUE
rel_growth_enterobacteriaceae
32.45395626
rel_growth_enterococcus
-0.809359086
rel_growth_staphylococcus
1.131683264
relative_growth_mesophiles
-0.797395693
required_sample_info_status
completed
sample name
qiita_sid_1632:1632.E5E08.Knight16sV4.JuannaBirdEMP.NoIndex.L005.R1.001.sequences
sample type
bird egg shell
sample_nest
Cernicalo.Cer2.2
sample_progress
sequenced (16S)
sampling time
2
sampling_code_id
539
species name
Falco tinnunculus
staphylococcus_density
1.440590498
storing_days
13
unhatched_eggs
Missing: Not provided
year
2007