Bird Egg Shells from Spain; 1632.E4C11.Knight16sV4.JuannaBirdEMP.NoIndex.L005.R1.001.sequences
bird metagenome
Bird Egg Shells from nest Collalbanegra.Col1.2
ENA first public
2016-07-13
ENA last update
2016-07-13
External Id
SAMEA4076396
INSDC center alias
UCSDMI
INSDC center name
University of California San Diego Microbiome Initiative
INSDC first public
2016-07-13T17:01:27Z
INSDC last update
2016-07-13T01:15:07Z
INSDC status
public
Submitter Id
qiita_sid_1632:1632.E4C11.Knight16sV4.JuannaBirdEMP.NoIndex.L005.R1.001.sequences
abandoned
No
altitude
0
anonymized name
E4C11
arcsine_fledge_success_brood
Missing: Not collected
arcsine_fledge_success_clutch
Missing: Not collected
arcsine_hatching_success
Missing: Not collected
area
Fuentealamo
assigned_from_geo
TRUE
backup
TRUE
bird_family
Muscicapidae
bird_order
Passeriformes
broken_eggs
Missing: Not collected
brood_size
Missing: Not collected
clutch_size
4
code_id_statistica
184
coll_date_juliane_days
134
collection date
5/15/07 0:00
collection_timestamp
5/15/07
comments_in_spanish
Depredado
common name
organismal metagenome
country
GAZ:Spain
country_nation
Spain
country_region
Hoya de Guadix
culturing_date
5/22/07
depth
0
dna_extracted
TRUE
elevation
1145
empo_0
EMP sample
empo_1
Host-associated
empo_2
Animal
empo_3
Animal surface
enterobacteriaceae_density
18381539.3
enterococcus_density
1.547069622
env biome
mediterranean shrubland biome
env feature
nest of bird
env matter
egg
env package
host-associated
eppendorf_name
COL 1.2
estefania_plates
4C11
extracted DNA avail now
TRUE
feathers
TRUE
fledge_success_brood
Missing: Not collected
fledge_success_clutch
Missing: Not collected
fledging_date
Missing: Not collected
geo loc name
Spain:Hoya de Guadix
hatching_date
Missing: Not collected
hatching_success
Missing: Not collected
hatching_synchrony
asyn
host common name
Black weathear
host scientific name
Passeriformes
host subject id
Collalbanegra.Col1.2
host taxid
391703
latitude
37.34600556
lay_date_juliane_days
119
laying_date
7/29/07
log_enterobacteriaceae_density
7.264381901
log_enterococcus_density
0.406040816
log_mesophiles_density
5.896405643
log_rel_growth_enterobact
0.265314424
log_rel_growth_enterococcus
-0.120730055
log_rel_growth_mesophiles
-3.999999449
log_rel_growth_staphylococcus
-0.183323048
log_staphylococcus_density
0
longitude
-3.061197222
mesophiles_density
787780.2556
nest_type
hole
number_fledging
Missing: Not provided
number_sampled_eggs
4
observer
Juanma
physical_specimen_location
CCME
physical_specimen_remaining
TRUE
plants
FALSE
platero_plates
P4D04
predated
egg phase
public
TRUE
rel_growth_enterobacteriaceae
0.842105179
rel_growth_enterococcus
-0.242696533
rel_growth_staphylococcus
-0.344342624
relative_growth_mesophiles
-0.9999
required_sample_info_status
completed
sample name
qiita_sid_1632:1632.E4C11.Knight16sV4.JuannaBirdEMP.NoIndex.L005.R1.001.sequences
sample type
bird egg shell
sample_nest
Collalbanegra.Col1.2
sample_progress
sequenced (16S)
sampling time
2
sampling_code_id
368
species name
Oenanthe leucura
staphylococcus_density
0
storing_days
7
unhatched_eggs
Missing: Not provided
year
2007