1632.E4B11.Knight16sV4.JuannaBirdEMP.NoIndex.L005.R1.001.sequences; Bird Egg Shells from Spain
bird metagenome
Bird Egg Shells from nest Gorrionmolinero.C.39.2
ENA first public
2016-07-13
ENA last update
2016-07-13
External Id
SAMEA4076383
INSDC center alias
UCSDMI
INSDC center name
University of California San Diego Microbiome Initiative
INSDC first public
2016-07-13T17:01:27Z
INSDC last update
2016-07-13T01:15:07Z
INSDC status
public
Submitter Id
qiita_sid_1632:1632.E4B11.Knight16sV4.JuannaBirdEMP.NoIndex.L005.R1.001.sequences
abandoned
No
altitude
0
anonymized name
E4B11
arcsine_fledge_success_brood
0.100167421
arcsine_fledge_success_clutch
0.100167421
arcsine_hatching_success
1.570796327
area
Hernan-Valle
assigned_from_geo
TRUE
backup
TRUE
bird_family
Passeridae
bird_order
Passeriformes
broken_eggs
0
brood_size
5
clutch_size
5
code_id_statistica
337
coll_date_juliane_days
134
collection date
5/15/07 0:00
collection_timestamp
5/15/07
comments_in_spanish
Huevo 3 raro
common name
organismal metagenome
country
GAZ:Spain
country_nation
Spain
country_region
Hoya de Guadix
culturing_date
5/22/07
depth
0
dna_extracted
TRUE
elevation
1134
empo_0
EMP sample
empo_1
Host-associated
empo_2
Animal
empo_3
Animal surface
enterobacteriaceae_density
278046268.9
enterococcus_density
3.539235332
env biome
mediterranean shrubland biome
env feature
nest of bird
env matter
egg
env package
host-associated
eppendorf_name
C.39.2
estefania_plates
4B11
extracted DNA avail now
TRUE
feathers
TRUE
fledge_success_brood
1
fledge_success_clutch
1
fledging_date
5/28/07
geo loc name
Spain:Hoya de Guadix
hatching_date
5/16/07
hatching_success
1
hatching_synchrony
syn
host common name
Eurasian tree sparrow
host scientific name
Passeriformes
host subject id
Gorrionmolinero.C.39.2
host taxid
9160
latitude
37.37229722
lay_date_juliane_days
117
laying_date
7/27/07
log_enterobacteriaceae_density
8.444117073
log_enterococcus_density
0.656982699
log_mesophiles_density
8.525276885
log_rel_growth_enterobact
1.687231527
log_rel_growth_enterococcus
0.443515723
log_rel_growth_mesophiles
1.909720462
log_rel_growth_staphylococcus
0.236233588
log_staphylococcus_density
0.355952703
longitude
-3.066655556
mesophiles_density
335179063.8
nest_type
hole
number_fledging
5
number_sampled_eggs
5
observer
Juanma
physical_specimen_location
CCME
physical_specimen_remaining
TRUE
plants
TRUE
platero_plates
P4D03
predated
No
public
TRUE
rel_growth_enterobacteriaceae
47.66665832
rel_growth_enterococcus
1.77661537
rel_growth_staphylococcus
0.722794943
relative_growth_mesophiles
80.23074979
required_sample_info_status
completed
sample name
qiita_sid_1632:1632.E4B11.Knight16sV4.JuannaBirdEMP.NoIndex.L005.R1.001.sequences
sample type
bird egg shell
sample_nest
Gorrionmolinero.C.39.2
sample_progress
sequenced (16S)
sampling time
2
sampling_code_id
369
species name
Passer montanus
staphylococcus_density
1.269617666
storing_days
7
unhatched_eggs
0
year
2007