1632.E1G01.Knight16sV4.JuannaBirdEMP.NoIndex.L005.R1.001.sequences; Bird Egg Shells from Spain
bird metagenome
Bird Egg Shells from nest Abubilla.793.1
ENA first public
2016-07-13
ENA last update
2016-07-13
External Id
SAMEA4076108
INSDC center alias
UCSDMI
INSDC center name
University of California San Diego Microbiome Initiative
INSDC first public
2016-07-13T17:01:27Z
INSDC last update
2016-07-13T01:14:58Z
INSDC status
public
Submitter Id
qiita_sid_1632:1632.E1G01.Knight16sV4.JuannaBirdEMP.NoIndex.L005.R1.001.sequences
abandoned
brood phase
altitude
0
anonymized name
E1G01
arcsine_fledge_success_brood
Missing: Not collected
arcsine_fledge_success_clutch
Missing: Not collected
arcsine_hatching_success
0.886077124
area
Zona Miki
assigned_from_geo
TRUE
backup
FALSE
bird_family
Upuidae
bird_order
Upupiformes
broken_eggs
0
brood_size
3
clutch_size
5
code_id_statistica
39
coll_date_juliane_days
Missing: Not collected
collection date
4/1/07 0:00
collection_timestamp
4/1/07
comments_in_spanish
Abandonados
common name
organismal metagenome
country
GAZ:Spain
country_nation
Spain
country_region
Hoya de Guadix
culturing_date
4/3/07
depth
0
dna_extracted
TRUE
elevation
923
empo_0
EMP sample
empo_1
Host-associated
empo_2
Animal
empo_3
Animal surface
enterobacteriaceae_density
178.9078576
enterococcus_density
2.28759443
env biome
mediterranean shrubland biome
env feature
nest of bird
env matter
egg
env package
host-associated
eppendorf_name
793.1
estefania_plates
1G01
extracted DNA avail now
TRUE
feathers
FALSE
fledge_success_brood
Missing: Not collected
fledge_success_clutch
Missing: Not collected
fledging_date
Missing: Not collected
geo loc name
Spain:Hoya de Guadix
hatching_date
4/7/07
hatching_success
0.6
hatching_synchrony
asyn
host common name
Eurasian hoopoe
host scientific name
Upupiformes
host subject id
Abubilla.793.1
host taxid
57439
latitude
37.32240556
lay_date_juliane_days
74
laying_date
6/14/07
log_enterobacteriaceae_density
2.255050132
log_enterococcus_density
0.516878236
log_mesophiles_density
3.523120826
log_rel_growth_enterobact
Missing: Not provided
log_rel_growth_enterococcus
Missing: Not provided
log_rel_growth_mesophiles
Missing: Not provided
log_rel_growth_staphylococcus
Missing: Not provided
log_staphylococcus_density
1.363978756
longitude
-3.128919444
mesophiles_density
3334.191891
nest_type
hole
number_fledging
Missing: Not provided
number_sampled_eggs
5
observer
Manolo
physical_location_1
U Granada
physical_specimen_location
CCME
physical_specimen_remaining
TRUE
plants
FALSE
platero_plates
P1A07
predated
No
public
TRUE
required_sample_info_status
completed
sample name
qiita_sid_1632:1632.E1G01.Knight16sV4.JuannaBirdEMP.NoIndex.L005.R1.001.sequences
sample type
bird egg shell
sample_nest
Abubilla.793.1
sample_progress
sequenced (16S)
sampling time
1
sampling_code_id
7
species name
Upupa epops
staphylococcus_density
22.11951694
storing_days
2
unhatched_eggs
2
year
2007