Acidobacteriaceae bacterium
ENA-FIRST-PUBLIC
2020-07-24T04:05:43Z
ENA-LAST-UPDATE
2020-05-25T20:58:32Z
External Id
SAMEA6855207
INSDC center name
INSTITUTE OF ENVIRONMENTAL BIOTECHNOLOGY, GRAZ UNIVERSITY OF TECHNOLOGY
INSDC first public
2020-07-24T04:05:43Z
INSDC last update
2020-05-25T20:58:32Z
INSDC status
public
Submitter Id
Lichen_MAGs_Lobaria1
assembly quality
Many fragments with little to no review of assembly other than reporting of standard assembly statistics
assembly software
metaSPAdes
binning parameters
default
binning software
concoct
collection date
2012-10-12
completeness score
98.9
completeness software
checkm
contamination score
3.6
environment (biome)
host organism
environment (feature)
organic feature
environment (material)
organic feature
geographic location (country and/or sea)
Austria
geographic location (latitude)
47.63528
geographic location (longitude)
14.74583
investigation type
metagenome-assembled genome
isolation source
lichenized fungi
metagenomic source
Lobaria pulmonaria
project name
ERS4582382
sample derived from
ERS4582382
sample name
Lichen_MAGs_Lobaria1
scientific_name
Acidobacteriaceae bacterium
sequencing method
Illumina HiSeq 2000
taxonomic identity marker
multi-markers approach using the Bin Annotation Tool (BAT)