bovine gut metagenome
Cattle rumen microbiome. 10677_coassembly
ENA-FIRST-PUBLIC
2019-07-10T17:05:17Z
ENA-LAST-UPDATE
2019-07-04T11:26:03Z
External Id
SAMEA5755620
INSDC center name
THE ROSLIN INSTITUTE
INSDC first public
2019-07-10T17:05:17Z
INSDC last update
2019-07-04T11:26:03Z
INSDC status
public
Submitter Id
10677_coassembly
collection date
not collected
environment (biome)
Bos taurus
environment (feature)
stomach
environment (material)
bodily fluid
geographic location (country and/or sea)
United Kingdom
geographic location (latitude)
55.861398
geographic location (longitude)
-3.206493
host age
459-661
host body habitat
gut
host body product
rumen fluid
host body site
rumen
host common name
cow
host sex
male
host taxid
9913
host-associated environmental package
host-associated
investigation type
metagenome
project name
Metagenomic sequencing of the rumen of 240 cattle from Scotland
sample derived from
ERS3190305,ERS3190306,ERS3190307,ERS3190308,ERS3190309,ERS3190310,ERS3190311,ERS3190312,ERS3190313,ERS3190314,ERS3190315,ERS3190316,ERS3190318,ERS3190319,ERS3190320,ERS3190321,ERS3190322,ERS3190323,ERS3190325,ERS3190326,ERS3190327,ERS3190329,ERS3190331,ERS3190332,ERS3190333,ERS3190334,ERS3190337,ERS3190338,ERS3190339,ERS3190342,ERS3190344,ERS3190345,ERS3190346,ERS3190347,ERS3190348,ERS3190349,ERS3190350,ERS3190351,ERS3190352,ERS3190317,ERS3190324,ERS3190328,ERS3190330,ERS3190335,ERS3190336,ERS3190340,ERS3190341,ERS3190343
sample name
10677_coassembly
scientific_name
bovine gut metagenome
sequencing method
Illumina HiSeq 4000
subspecific genetic lineage
Various