Candidatus Scalindua brodae
Draft genome sequence of anammox bacterium Scalindua brodae, obtained using differential coverage binning of sequencing data from two reactor enrichments.
collection_date
2012-05
env_biome
bioreactor
env_feature
bioreactor
env_material
water
geo_loc_name
Netherlands
lat_lon
51.823672 N 5.868934 E
isolate
RU1
metagenome_source
bioreactor metagenome
isolation-source
two long term enrichment bioreactors used to enrich specifically for anammox bacteria; the reactors are fed with a mineral medium containing no carbon source other than CO2 and only NO2 and NH4 as electron acceptor/donor respectively; one reactor was described in Russ et al 2014 (PMID 24750895), the other reactor was the enrichment used as the seed for the experimental reactor described in Russ et al.; the seed reactor was in turn inoculated from a previous bioreactor which was started with biomass from a sediment in the Gullmar Fjord, described in Van de Vossenberg et al 2008 (PMID 18462401); This environmental sampling was, however, over 8 years ago.
BioSampleModel
MIMS.me
BioSampleModel
MIGS/MIMS/MIMARKS.miscellaneous