bovine gut metagenome
Cattle rumen microbiome. 10676_coassembly
ENA-FIRST-PUBLIC
2019-07-10T17:05:17Z
ENA-LAST-UPDATE
2019-07-04T11:26:03Z
External Id
SAMEA5755619
INSDC center name
THE ROSLIN INSTITUTE
INSDC first public
2019-07-10T17:05:17Z
INSDC last update
2019-07-04T11:26:03Z
INSDC status
public
Submitter Id
10676_coassembly
collection date
not collected
environment (biome)
Bos taurus
environment (feature)
stomach
environment (material)
bodily fluid
geographic location (country and/or sea)
United Kingdom
geographic location (latitude)
55.861398
geographic location (longitude)
-3.206493
host age
459-661
host body habitat
gut
host body product
rumen fluid
host body site
rumen
host common name
cow
host sex
male
host taxid
9913
host-associated environmental package
host-associated
investigation type
metagenome
project name
Metagenomic sequencing of the rumen of 240 cattle from Scotland
sample derived from
ERS3190257,ERS3190258,ERS3190259,ERS3190260,ERS3190261,ERS3190262,ERS3190265,ERS3190266,ERS3190267,ERS3190268,ERS3190269,ERS3190270,ERS3190271,ERS3190272,ERS3190273,ERS3190274,ERS3190275,ERS3190276,ERS3190277,ERS3190278,ERS3190279,ERS3190280,ERS3190281,ERS3190282,ERS3190283,ERS3190284,ERS3190285,ERS3190286,ERS3190287,ERS3190288,ERS3190289,ERS3190290,ERS3190291,ERS3190292,ERS3190293,ERS3190294,ERS3190295,ERS3190296,ERS3190297,ERS3190298,ERS3190299,ERS3190301,ERS3190302,ERS3190303,ERS3190304,ERS3190263,ERS3190264,ERS3190300
sample name
10676_coassembly
scientific_name
bovine gut metagenome
sequencing method
Illumina HiSeq 4000
subspecific genetic lineage
Various