bovine gut metagenome
Cattle rumen microbiome. 10675_coassembly
ENA-FIRST-PUBLIC
2019-07-10T17:05:17Z
ENA-LAST-UPDATE
2019-07-04T11:26:03Z
External Id
SAMEA5755618
INSDC center name
THE ROSLIN INSTITUTE
INSDC first public
2019-07-10T17:05:17Z
INSDC last update
2019-07-04T11:26:03Z
INSDC status
public
Submitter Id
10675_coassembly
collection date
not collected
environment (biome)
Bos taurus
environment (feature)
stomach
environment (material)
bodily fluid
geographic location (country and/or sea)
United Kingdom
geographic location (latitude)
55.861398
geographic location (longitude)
-3.206493
host age
459-661
host body habitat
gut
host body product
rumen fluid
host body site
rumen
host common name
cow
host sex
male
host taxid
9913
host-associated environmental package
host-associated
investigation type
metagenome
project name
Metagenomic sequencing of the rumen of 240 cattle from Scotland
sample derived from
ERS3190209,ERS3190210,ERS3190211,ERS3190212,ERS3190213,ERS3190214,ERS3190215,ERS3190216,ERS3190217,ERS3190218,ERS3190219,ERS3190220,ERS3190221,ERS3190222,ERS3190223,ERS3190224,ERS3190225,ERS3190226,ERS3190227,ERS3190228,ERS3190229,ERS3190230,ERS3190231,ERS3190232,ERS3190233,ERS3190234,ERS3190235,ERS3190236,ERS3190237,ERS3190238,ERS3190239,ERS3190240,ERS3190241,ERS3190242,ERS3190243,ERS3190244,ERS3190245,ERS3190246,ERS3190247,ERS3190249,ERS3190250,ERS3190251,ERS3190252,ERS3190253,ERS3190254,ERS3190255,ERS3190256,ERS3190248
sample name
10675_coassembly
scientific_name
bovine gut metagenome
sequencing method
Illumina HiSeq 4000
subspecific genetic lineage
Various