bovine gut metagenome
Cattle rumen microbiome. 10674_coassembly
ENA-FIRST-PUBLIC
2019-07-10T17:05:17Z
ENA-LAST-UPDATE
2019-07-04T11:26:03Z
External Id
SAMEA5755617
INSDC center name
THE ROSLIN INSTITUTE
INSDC first public
2019-07-10T17:05:17Z
INSDC last update
2019-07-04T11:26:03Z
INSDC status
public
Submitter Id
10674_coassembly
collection date
not collected
environment (biome)
Bos taurus
environment (feature)
stomach
environment (material)
bodily fluid
geographic location (country and/or sea)
United Kingdom
geographic location (latitude)
55.861398
geographic location (longitude)
-3.206493
host age
459-661
host body habitat
gut
host body product
rumen fluid
host body site
rumen
host common name
cow
host sex
male
host taxid
9913
host-associated environmental package
host-associated
investigation type
metagenome
project name
Metagenomic sequencing of the rumen of 240 cattle from Scotland
sample derived from
ERS3190161,ERS3190162,ERS3190163,ERS3190164,ERS3190165,ERS3190166,ERS3190167,ERS3190168,ERS3190169,ERS3190170,ERS3190171,ERS3190172,ERS3190173,ERS3190174,ERS3190175,ERS3190176,ERS3190177,ERS3190178,ERS3190179,ERS3190180,ERS3190181,ERS3190182,ERS3190183,ERS3190184,ERS3190185,ERS3190186,ERS3190187,ERS3190188,ERS3190189,ERS3190190,ERS3190191,ERS3190192,ERS3190193,ERS3190194,ERS3190195,ERS3190196,ERS3190197,ERS3190198,ERS3190199,ERS3190200,ERS3190201,ERS3190202,ERS3190203,ERS3190204,ERS3190205,ERS3190206,ERS3190207,ERS3190208
sample name
10674_coassembly
scientific_name
bovine gut metagenome
sequencing method
Illumina HiSeq 4000
subspecific genetic lineage
Various