bovine gut metagenome
Cattle rumen microbiome. 10678_coassembly
ENA-FIRST-PUBLIC
2019-07-10T17:05:17Z
ENA-LAST-UPDATE
2019-07-04T11:26:03Z
External Id
SAMEA5755621
INSDC center name
THE ROSLIN INSTITUTE
INSDC first public
2019-07-10T17:05:17Z
INSDC last update
2019-07-04T11:26:03Z
INSDC status
public
Submitter Id
10678_coassembly
collection date
not collected
environment (biome)
Bos taurus
environment (feature)
stomach
environment (material)
bodily fluid
geographic location (country and/or sea)
United Kingdom
geographic location (latitude)
55.861398
geographic location (longitude)
-3.206493
host age
459-661
host body habitat
gut
host body product
rumen fluid
host body site
rumen
host common name
cow
host sex
male
host taxid
9913
host-associated environmental package
host-associated
investigation type
metagenome
project name
Metagenomic sequencing of the rumen of 240 cattle from Scotland
sample derived from
ERS3190353,ERS3190354,ERS3190355,ERS3190356,ERS3190357,ERS3190358,ERS3190359,ERS3190360,ERS3190361,ERS3190362,ERS3190363,ERS3190364,ERS3190365,ERS3190367,ERS3190368,ERS3190372,ERS3190373,ERS3190374,ERS3190375,ERS3190376,ERS3190377,ERS3190378,ERS3190379,ERS3190380,ERS3190381,ERS3190382,ERS3190383,ERS3190384,ERS3190385,ERS3190386,ERS3190387,ERS3190388,ERS3190389,ERS3190390,ERS3190391,ERS3190392,ERS3190393,ERS3190394,ERS3190395,ERS3190396,ERS3190397,ERS3190398,ERS3190399,ERS3190400,ERS3190366,ERS3190369,ERS3190370,ERS3190371
sample name
10678_coassembly
scientific_name
bovine gut metagenome
sequencing method
Illumina HiSeq 4000
subspecific genetic lineage
Various