human gut metagenome
American Gut Project Stool sample
ENA-FIRST-PUBLIC
2020-07-26T04:05:30Z
ENA-LAST-UPDATE
2020-07-25T20:17:06Z
External Id
SAMEA7090689
INSDC center name
UCSDMI
INSDC first public
2020-07-26T04:05:30Z
INSDC last update
2020-07-25T20:17:06Z
INSDC status
public
Submitter Id
qiita_sid_10317:10317.000113730
acid_reflux
I do not have this condition
acne medication
No
acne_medication_otc
No
add_adhd
I do not have this condition
age cat
60s
alcohol consumption
Yes
alcohol_frequency
Regularly (3-5 times/week)
alcohol_types_beercider
TRUE
alcohol_types_red_wine
TRUE
alcohol_types_sour_beers
FALSE
alcohol_types_spiritshard_alcohol
FALSE
alcohol_types_unspecified
FALSE
alcohol_types_white_wine
FALSE
allergic to i have no food allergies that i know of
TRUE
allergic_to_other
FALSE
allergic_to_peanuts
FALSE
allergic_to_shellfish
FALSE
allergic_to_tree_nuts
FALSE
allergic_to_unspecified
FALSE
alzheimers
I do not have this condition
antibiotic_history
I have not taken antibiotics in the past year.
appendix_removed
No
artificial_sweeteners
Never
asd
I do not have this condition
autoimmune
I do not have this condition
birth year
1954
body habitat
UBERON:feces
body product
UBERON:feces
body site
UBERON:feces
bowel_movement_frequency
Two
bowel_movement_quality
I tend to have normal formed stool - Type 3 and 4
breastmilk_formula_ensure
No
cancer
I do not have this condition
cancer treatment
Unspecified
cardiovascular_disease
I do not have this condition
cat
No
cdiff
I do not have this condition
chickenpox
Yes
clinical condition
I do not have this condition
consume_animal_products_abx
No
contraceptive
No
cosmetics_frequency
Never
country of birth
United Kingdom
country_residence
United Kingdom
csection
No
deodorant_use
I use an antiperspirant
diabetes
I do not have this condition
diabetes type
Unspecified
diet type
Vegetarian but eat seafood
dog
Yes
dominant hand
I am right handed
drinking_water_source
Filtered
drinks_per_session
2-Jan
empo_1
Host-associated
empo_2
Animal
empo_3
Animal distal gut
env biome
dense settlement biome
env feature
human-associated habitat
env package
human-gut
env_material
feces
epilepsy_or_seizure_disorder
I do not have this condition
exercise_frequency
Occasionally (1-2 times/week)
exercise_location
Both
fed_as_infant
Not sure
fermented_consumed_beer
FALSE
fermented_consumed_chicha
FALSE
fermented_consumed_cider
FALSE
fermented_consumed_cottage_cheese
FALSE
fermented_consumed_fermented_beansmisonatto
FALSE
fermented_consumed_fermented_breadsourdoughinjera
FALSE
fermented_consumed_fermented_fish
FALSE
fermented_consumed_fermented_tofu
FALSE
fermented_consumed_fish_sauce
FALSE
fermented_consumed_kefir_milk
FALSE
fermented_consumed_kefir_water
FALSE
fermented_consumed_kimchi
FALSE
fermented_consumed_kombucha
FALSE
fermented_consumed_mead
FALSE
fermented_consumed_other
not provided
fermented_consumed_pickled_vegetables
FALSE
fermented_consumed_sauerkraut
FALSE
fermented_consumed_sour_creamcreme_fraiche
FALSE
fermented_consumed_tempeh
FALSE
fermented_consumed_unspecified
FALSE
fermented_consumed_wine
FALSE
fermented_consumed_yogurtlassi
FALSE
fermented_frequency
not provided
fermented_increased
not provided
fermented_other
not provided
fermented_plant_frequency
Occasionally (1-2 times/week)
fermented_produce_commercial_beer
FALSE
fermented_produce_commercial_chicha
FALSE
fermented_produce_commercial_cider
FALSE
fermented_produce_commercial_cottage_cheese
FALSE
fermented_produce_commercial_fermented_beansmisonatto
FALSE
fermented_produce_commercial_fermented_breadsourdoughinjera
FALSE
fermented_produce_commercial_fermented_fish
FALSE
fermented_produce_commercial_fermented_tofu
FALSE
fermented_produce_commercial_fish_sauce
FALSE
fermented_produce_commercial_kefir_milk
FALSE
fermented_produce_commercial_kefir_water
FALSE
fermented_produce_commercial_kimchi
FALSE
fermented_produce_commercial_kombucha
FALSE
fermented_produce_commercial_mead
FALSE
fermented_produce_commercial_other
not provided
fermented_produce_commercial_pickled_vegetables
FALSE
fermented_produce_commercial_sauerkraut
FALSE
fermented_produce_commercial_sour_creamcreme_fraiche
FALSE
fermented_produce_commercial_tempeh
FALSE
fermented_produce_commercial_unspecified
FALSE
fermented_produce_commercial_wine
FALSE
fermented_produce_commercial_yogurtlassi
FALSE
fermented_produce_personal_beer
FALSE
fermented_produce_personal_chicha
FALSE
fermented_produce_personal_cider
FALSE
fermented_produce_personal_cottage_cheese
FALSE
fermented_produce_personal_fermented_beansmisonatto
FALSE
fermented_produce_personal_fermented_breadsourdoughinjera
FALSE
fermented_produce_personal_fermented_fish
FALSE
fermented_produce_personal_fermented_tofu
FALSE
fermented_produce_personal_fish_sauce
FALSE
fermented_produce_personal_kefir_milk
FALSE
fermented_produce_personal_kefir_water
FALSE
fermented_produce_personal_kimchi
FALSE
fermented_produce_personal_kombucha
FALSE
fermented_produce_personal_mead
FALSE
fermented_produce_personal_other
not provided
fermented_produce_personal_pickled_vegetables
FALSE
fermented_produce_personal_sauerkraut
FALSE
fermented_produce_personal_sour_creamcreme_fraiche
FALSE
fermented_produce_personal_tempeh
FALSE
fermented_produce_personal_unspecified
FALSE
fermented_produce_personal_wine
FALSE
fermented_produce_personal_yogurtlassi
FALSE
flossing_frequency
Occasionally (1-2 times/week)
flu_vaccine_date
6 months
frozen_dessert_frequency
Rarely (less than once/week)
fruit_frequency
Daily
fungal_overgrowth
I do not have this condition
gluten
No
height cm
179
high_fat_red_meat_frequency
Never
homecooked_meals_frequency
Regularly (3-5 times/week)
host common name
human
host taxid
9606
ibd
I do not have this condition
ibd_diagnosis_refined
Unspecified
ibs
I do not have this condition
kidney_disease
I do not have this condition
lactose
No
last_move
I have lived in my current state of residence for more than a year.
last_travel
6 months
level_of_education
Graduate or Professional degree
liver_disease
I do not have this condition
livingwith
Yes
lung disease
I do not have this condition
meat_eggs_frequency
Rarely (less than once/week)
mental_illness
No
mental_illness_type_anorexia_nervosa
FALSE
mental_illness_type_bipolar_disorder
FALSE
mental_illness_type_bulimia_nervosa
FALSE
mental_illness_type_depression
FALSE
mental_illness_type_ptsd_post_traumatic_stress_disorder
FALSE
mental_illness_type_schizophrenia
FALSE
mental_illness_type_substance_abuse
FALSE
mental_illness_type_unspecified
TRUE
migraine
I do not have this condition
milk_cheese_frequency
Never
milk_substitute_frequency
Daily
multivitamin
Yes
nail_biter
No
non_food_allergies_beestings
FALSE
non_food_allergies_drug_eg_penicillin
FALSE
non_food_allergies_pet_dander
FALSE
non_food_allergies_poison_ivyoak
FALSE
non_food_allergies_sun
FALSE
non_food_allergies_unspecified
TRUE
olive_oil
Daily
one_liter_of_water_a_day_frequency
Daily
other_supplement_frequency
Yes
pets_other
No
physical_specimen_remaining
Yes
pku
I do not have this condition
pool_frequency
Never
poultry_frequency
Never
pregnant
No
prepared_meals_frequency
Rarely (less than once/week)
probiotic_frequency
Rarely (a few times/month)
race
Caucasian
ready_to_eat_meals_frequency
Rarely (less than once/week)
red_meat_frequency
Never
roommates_in_study
Yes
salted_snacks_frequency
Regularly (3-5 times/week)
sample name
qiita_sid_10317:10317.000113730
sample type
Stool
scientific_name
human gut metagenome
seafood_frequency
Rarely (less than once/week)
seasonal_allergies
No
sibo
I do not have this condition
skin_condition
I do not have this condition
sleep_duration
6-7 hours
smoking_frequency
Never
softener
No
specialized_diet_exclude_dairy
FALSE
specialized_diet_exclude_nightshades
FALSE
specialized_diet_exclude_refined_sugars
FALSE
specialized_diet_fodmap
FALSE
specialized_diet_halaal
FALSE
specialized_diet_i_do_not_eat_a_specialized_diet
FALSE
specialized_diet_kosher
FALSE
specialized_diet_modified_paleo_diet
FALSE
specialized_diet_other_restrictions_not_described_here
FALSE
specialized_diet_paleo_diet_or_primal_diet
FALSE
specialized_diet_raw_food_diet
FALSE
specialized_diet_unspecified
TRUE
specialized_diet_weston_price_or_other_low_grain_low_processed_food_diet
FALSE
sugar_sweetened_drink_frequency
Never
sugary_sweets_frequency
Regularly (3-5 times/week)
teethbrushing_frequency
Daily
thyroid
I do not have this condition
tonsils_removed
No
types_of_plants
More than 30
vegetable_frequency
Daily
vitamin_b_supplement_frequency
Never
vitamin_d_supplement_frequency
Occasionally (1-2 times/week)
vivid_dreams
Never
weight_change
Remained stable
whole_eggs
Rarely (less than once/week)
whole_grain_frequency
Rarely (less than once/week)