Ocean beneath Ross Ice Shelf - metagenomic bin 035
uncultured Woeseiaceae bacterium
ENA-FIRST-PUBLIC
2021-03-24T17:07:22Z
ENA-LAST-UPDATE
2020-04-15T17:46:37Z
External Id
SAMEA6738318
INSDC center name
UNIVERSITY OF VIENNA
INSDC first public
2021-03-24T17:07:22Z
INSDC last update
2020-04-15T17:46:37Z
INSDC status
public
Submitter Id
RIS_MAG_035
assembly software
metaSPAdes;kmer set 21,31,41,51,61,71,81,91,101,111,121,127, otherwise default parameters
binning parameters
differential coverage across 9 samples, 4-mer frequencies
binning software
MetaBAT v. 2.12.1, MaxBin v. 2.2.4, Metawatt v. 3.5.3 summarized via DASTool v. 1.1.0 and refined in Anvi'O v. 5.2
collection date
2017-12
environment (biome)
ENVO:01000048
environment (feature)
ENVO:00000015
environment (material)
ENVO:00002149
geographic location (country and/or sea)
Southern Ocean
geographic location (latitude)
80.65767 S
geographic location (longitude)
174.46263 W
investigation type
metagenome-assembled genome
isolation source
seawater
metagenomic source
marine plankton metagenome
project name
PRJEB35712
sample derived from
ERS4140166-ERS4140174
sample name
RIS_MAG_035
scientific_name
uncultured Woeseiaceae bacterium
sequencing method
Illumina HiSeq 2500