UltraPac_3515_E_bin_84
uncultured Flavobacteriaceae bacterium
ENA first public
2021-03-24
ENA last update
2021-03-24
External Id
SAMEA8401838
INSDC center alias
MAX-PLANCK INSTITUTE FOR MARINE MICROBIOLOGY, BREMEN
INSDC center name
MAX-PLANCK INSTITUTE FOR MARINE MICROBIOLOGY, BREMEN
INSDC first public
2021-03-24T08:48:20Z
INSDC last update
2021-03-24T08:51:13Z
INSDC status
public
Submitter Id
UltraPac_3515_E_bin_84
assembly quality
Many fragments with little to no review of assembly other than reporting of standard assembly statistics
assembly software
Idba-ud
binning parameters
default
binning software
Maxbin2, Metabat2, Metawrap
collection date
2016-01-04
completeness score
99.26
completeness software
CheckM
contamination score
1.47
environment (biome)
Marine
environment (feature)
Photic zone
environment (material)
water
geographic location (country and/or sea)
Pacific Ocean
geographic location (latitude)
23.500 S
geographic location (longitude)
110.049 W
investigation type
metagenome-assembled genome
isolation source
sea water
metagenomic source
marine metagenome
project name
UltraPac_SO245_MG
sample derived from
ERS6087311
sample description
This sample represents a MAG derived from the metagenomic sample ERS6087311
sample name
UltraPac_3515_E_bin_84
sequencing method
Illumina HiSeq3000
taxonomic identity marker
Multi-marker approach