uncultured Clostridium sp.
ENA-FIRST-PUBLIC
2020-06-26T17:06:09Z
ENA-LAST-UPDATE
2020-06-25T14:31:56Z
External Id
SAMEA7017193
INSDC center name
UNIVERSITY OF EDINBURGH
INSDC first public
2020-06-26T17:06:09Z
INSDC last update
2020-06-25T14:31:56Z
INSDC status
public
Submitter Id
bin.60
assembly software
MEGAHIT
binning parameters
coverage and tetramer
binning software
MetaBAT2
collection date
2016
completeness score
87.03
completeness software
CheckM
contamination score
0.35
environment (biome)
Bos indicus gut
environment (feature)
Rumen
environment (material)
Rumen Digesta
geographic location (country and/or sea)
Kenya
geographic location (latitude)
-1.270313
geographic location (longitude)
36.723973
investigation type
metagenome-assembled genome
isolation source
Rumen digesta from Bos indicus cattle
metagenomic source
gut metagenome
project name
Feed-Restricted Rumen
sample derived from
ERS4784418,ERS4784419,ERS4784420,ERS4784421,ERS4784422,ERS4784423,ERS4784424,ERS4784425,ERS4784426,ERS4784427,ERS4784428,ERS4784429,ERS4784430,ERS4784431,ERS4784432,ERS4784433,ERS4784434,ERS4784435,ERS4784436,ERS4784437,ERS4784438,ERS4784439,ERS4784440,ERS4784441
sample name
bin.60
scientific_name
uncultured Clostridium sp.
sequencing method
pyrosequencing