mouse gut metagenome
ENA first public
2018-01-30
ENA last update
2018-01-27
External Id
SAMEA104551139
INSDC center alias
UCSDMI
INSDC center name
University of California San Diego Microbiome Initiative
INSDC first public
2018-01-30T17:02:50Z
INSDC last update
2018-01-27T15:05:49Z
INSDC status
public
Submitter Id
qiita_sid_10422:10422.38.F.5
age
12
age units
weeks
anonymized name
38-F-5
body habitat
UBERON:feces
body product
UBERON:feces
body site
UBERON:feces
cage number
10
cage_location
In chamber
collection_timestamp
2016-04-19 10:00
diet
HFD
dna_extracted
TRUE
dob
1/26/16
elevation
193
empo_1
Host-associated
empo_2
Animal
empo_3
Animal distal gut
env biome
urban biome
env feature
animal-associated habitat
env package
host-associated
env_material
feces
expected_duration
4 weeks
exposure type
IHH
exposure_start
4/5/16
genotype
LDLR knockout
geo loc name
USA:CA,San Diego
host common name
mouse
host scientific name
Mus musculus
host subject id
Mouse 38
host taxid
10090
latitude
32.842
life stage
Adult
longitude
-117.258
mouse number
38
physical_specimen_location
UCSD LBR -80 freezer
physical_specimen_remaining
TRUE
sample name
qiita_sid_10422:10422.38.F.5
sample type
stool
sex
male
weekly_cage_food_consumption
68.3
weight
25.4
weight_units
g