uncultured Holdemania sp.
ENA-FIRST-PUBLIC
2020-06-26T17:06:09Z
ENA-LAST-UPDATE
2020-06-25T14:31:55Z
External Id
SAMEA7017102
INSDC center name
UNIVERSITY OF EDINBURGH
INSDC first public
2020-06-26T17:06:09Z
INSDC last update
2020-06-25T14:31:55Z
INSDC status
public
Submitter Id
bin.2558
assembly software
MEGAHIT
binning parameters
coverage and tetramer
binning software
MetaBAT2
collection date
2016
completeness score
96.05
completeness software
CheckM
contamination score
0
environment (biome)
Bos indicus gut
environment (feature)
Rumen
environment (material)
Rumen Digesta
geographic location (country and/or sea)
Kenya
geographic location (latitude)
-1.270313
geographic location (longitude)
36.723973
investigation type
metagenome-assembled genome
isolation source
Rumen digesta from Bos indicus cattle
metagenomic source
gut metagenome
project name
Feed-Restricted Rumen
sample derived from
ERS4784418,ERS4784419,ERS4784420,ERS4784421,ERS4784422,ERS4784423,ERS4784424,ERS4784425,ERS4784426,ERS4784427,ERS4784428,ERS4784429,ERS4784430,ERS4784431,ERS4784432,ERS4784433,ERS4784434,ERS4784435,ERS4784436,ERS4784437,ERS4784438,ERS4784439,ERS4784440,ERS4784441
sample name
bin.2558
scientific_name
uncultured Holdemania sp.
sequencing method
pyrosequencing