vaginal metagenome
ENA-FIRST-PUBLIC
2020-09-30T04:07:35Z
ENA-LAST-UPDATE
2020-04-11T11:56:51Z
External Id
SAMEA6662277
INSDC center name
Centre for Translational Microbiome Research (CTMR)
INSDC first public
2020-09-30T04:07:35Z
INSDC last update
2020-04-11T11:56:51Z
INSDC status
public
Submitter Id
Subject54_vaginal_luteal
collection date
2018-01
common name
human vaginal metagenome
environment (biome)
vagina
environment (feature)
lumen of vagina
environment (material)
mucus
experimental factor
luteal phase
geographic location (country and/or sea)
Denmark
geographic location (latitude)
55.7
geographic location (longitude)
12.6
geographic location (region and locality)
Copenhagen
host body mass index
24.62
host body product
mucus
host body site
vagina
host sex
female
host subject id
54
human associated environmental package
human-associated
investigation type
metagenome
library reads sequenced
1918814
nucleic acid extraction
MO Bio PowerFecal
presence of pets or farm animals
dog
project name
MiMens
sample collection device or method
FLOQSwabs
sample name
Subject54_vaginal_luteal
scientific_name
vaginal metagenome
sequencing method
Illumina NextSeq
travel outside the country in last six months
Croatia, Italy, Slovenia, Hungary