rhizosphere metagenome
collection_date
2013-10-22
depth
Root adhered below 0.5 -1 m
elev
4138.57 m
env_biome
Tundra
env_feature
Permafrost
env_material
Alpine soil
geo_loc_name
India: Nagula, Tawang, Arunachal Pradesh
lat_lon
27.65918 N 91.86228 E
ph
5-6.5
ph_meth
1:5 dilution of soil: water, and then take a pH measurement on the resulting solution with a laboratory pH meter
pool_dna_extracts
5 separate DNA extractions from 5 different rhizospheric soil at each location
rel_to_oxygen
microaerophilic
samp_collect_device
Hand trowel, post hole digger, HiDispo sterile bag (HiMedia)
samp_mat_process
Sieving, removal of soil contaminants and rootlets
samp_size
0.5 -1 kg
samp_vol_we_dna_ext
600 mg
store_cond
-20 C deep freezer for 15 days
BioSampleModel
MIMARKS.survey
BioSampleModel
MIGS/MIMS/MIMARKS.soil