Pasteurella multocida
strain
USDA-ARS-USMARC-59910
collection_date
2013-09-27
env_biome
livestock-associated habitat
env_feature
feedlot
env_material
mucus
geo_loc_name
USA:Kentucky
host
Bos taurus
isol_growth_condt
missing
lat_lon
missing
num_replicons
1
ref_biomaterial
missing
chem_administration
macrolide antibiotic
estimated_size
2250000
health_state
alive
host_age
5-7 months
host_body_habitat
nasopharynx
host_disease
pneumonia
host_life_stage
calf
host_subject_id
245
host_taxid
9913
host_tissue_sampled
nasopharynx
misc_param
case animal, exhibited bovine respiratory disease sign during 29 day experiment
perturbation
calf trailer transport from from USA:KY to USA:KS occurring between day 0 and day 1
samp_collect_device
nasopharyngeal swab
samp_mat_process
Swab samples from each nares were placed in 1 ml Amies transport medium, held at 4 C, and combined in lab to 2 ml. 50 microliter of suspension was spiral plated on chocolate agar with bacitracin for isolate recovery within 36 hours of sample collection
samp_size
2 ml
samp_store_temp
-80 C
source_material_id
13524
BioSampleModel
MIGS.ba
BioSampleModel
MIGS/MIMS/MIMARKS.host-associated