Metagenome or environmental sample from rat gut metagenome
This sample contains the raw data of 16S rRNA gene sequencing from feces of Wistar rats treted with six different diets: Low Fat Diet (LFT), Heated Low Fat Diet (Heated-LFD), High Fat Diet (HFD), Heated High Fat Diet (Heated-HFD), Western Diet (WD), Heated Western Diet (Heated-WD). The samples/barcodes are: WD_24R/TGGAGGACGGAC, WD_30R/CTGACATAATC, WD_36R/AGCACGAATC, Heated_HFD_39R/TTGGAGGCCAGC, HFD_40R/TGGAGCTTCCTC, Heated_WD_41R/TCAGTCCGAAC, WD_42R/TAAGGCAACCAC, Heated_LFD_01/CTAAGGTAAC, LFD_02/TAAGGAGAAC, Heated_LFD_06/TACCAAGATC, LFD_07/CAGAAGGAAC, Heated_LFD_11/TTCGTGATTC, LFD_12/TTCCGATAAC, Heated_LFD_16/TGAGCGGAAC, LFD_17/CTGACCGAAC, Heated_HFD_21/TAGGTGGTTC, HFD_22/TCTAACGGAC, Heated_WD_23/TTGGAGTGTC, Heated_HFD_27/TCTGGATGAC, HFD_28/TCTATTCGTC, Heated_WD_29/AGGCAATTGC, HFD_34/CAGATCCATC, Heated_WD_35/TCGCAATTAC, Heated_HFD_33/AACCTCATTC. The primer sequence for the mapping file is GATGTGCCAGCNGCCGCGGTAA.
host
Rattus norvegicus
isolation_source
feces
collection_date
2017
geo_loc_name
Brazil
lat_lon
30.039594 S 51.206252 W
BioSampleModel
Metagenome or environmental