primestore metagenome
collection_date
not applicable
env_broad_scale
not applicable
env_local_scale
not applicable
env_medium
Primestore
geo_loc_name
not applicable
host
not applicable
lat_lon
not applicable
host_subject_id
not applicable
host_sex
not applicable
host_tissue_sampled
['not applicable', 'not applicable']
host_age
not applicable
ethnicity
not applicable
host_occupation
not applicable
host_disease
not applicable
drug_usage
not applicable
host_hiv_stat
not applicable
host_body_mass_index
not applicable
host_height
not applicable
samp_size
['not applicable', '']
study_complt_stat
not applicable
isolation_source
not applicable
pulmonary_disord
not applicable
samp_mat_process
not applicable
samp_store_temp
-20 °C
smoker
not applicable
group
not applicable
visit
not applicable
visit_date
not applicable
run_processing_batch
R1
sample_type
sequencing_control
RawReads_ASVpipeline
4233
FinalReads_ASVpipeline
1524
sampling_induced_expectorated
NA
barcode
Primestore
sequencing_controls
yes
sequencing_control_details
Primestore
WRrepeats
NA
WRrepeats_WP
NA
WRrepeats_BP
NA
BRrepeats
NA
EXrepeats
NA
nontemplate
Primestore
primestore_detail
july_pstore
mock
NA
sample_extraction_controls
no
zymo_DNA
no
templateDNA_16SqPCR_copies
4.33
templateDNA_16SqPCR_Cq
36.16257054
templateDNA_16SqPCR
3.07e-06
well
C06
plate_number
P4
barcode_806R
806rcbc339
index_sequence
CACCACGGAAAC
DOB
not applicable
trial_arm
not applicable
adherence
not applicable
enrolmonth
not applicable
attendschool
not applicable
rs15antibty
not applicable
rs14antib
not applicable
dateart
not applicable
datehiv
not applicable
ageyart
not applicable
duryart
not applicable
artdrug1stline
not applicable
artdrug2ndline
not applicable
artreg
not applicable
fev1z
not applicable
weight
not applicable
f24mrcscore
not applicable
FEV1_baseline
not applicable
FEVpcpred
not applicable
FVC
not applicable
FVCZ
not applicable
FVCpcpred
not applicable
FEV1FVC
not applicable
FEV1FVCZ
not applicable
cd4
not applicable
vload
not applicable
zwauk
not applicable
zhauk
not applicable
zbmiuk
not applicable
vllog
not applicable
endtreatdate
['not applicable', 'not applicable']
sp05time
not applicable
all_3
not applicable
visit012
not applicable
visit1218
not applicable
visit018
not applicable
only2visits
not applicable
one_visit
not applicable
endfollowup
not applicable
dow
not applicable
dod
not applicable
lastvisit
not applicable
visittotno
not applicable
lastvisitdate
not applicable
treatstopreason
not applicable
cough_enrl
not applicable
cotrimoxazole
not applicable
adm
not applicable
nadm
not applicable
tbtreat
not applicable
acut_exac12m
not applicable
hospitalised12m
not applicable
reason_hospi
not applicable
antibiotic12m
not applicable
any3_reasons
not applicable
BioSampleModel
MIMARKS.survey
BioSampleModel
MIGS/MIMS/MIMARKS.human-associated