13338.St.neg.GLD090.b
ENA first public
2021-04-17
ENA last update
2020-11-24
External Id
SAMEA7617097
INSDC center alias
UCSDMI
INSDC center name
University of California San Diego Microbiome Initiative
INSDC first public
2021-04-17T00:26:13Z
INSDC last update
2020-11-24T22:15:20Z
INSDC status
public
Submitter Id
qiita_sid_13338:13338.St.neg.GLD090.b
abdominal_distension_new
1
abdominal_pain_24hr_new
NO
abdominal_pains_new
1
abx_non_exclusion
No
acid_regurgitation_new
1
adiponectin
5.4
alcohol_g_usda
6.06
alpha_carotene_mcg_usda
169.76
beta_carotene_mcg_usda
803.96
beta_cryptoxanthin_mcg_usda
63.21
bloating_24hr_new
NO
borborygmus_new
1
bristol_stool_scale_sample
2
caffeine_mg_usda
312.3
calcium_mg_usda
1238.43
carbohydrate_g_usda
248.92
cd4_cd38_single_positive_cells
not collected
cd4_count
not collected
cd4_hladr_cd38_percent
not collected
cd4_hladr_single_positive_cells
not collected
cd4_percent
not collected
cd8_cd38_single_positive_cells
not collected
cd8_count
not collected
cd8_hladr_cd38_percent
not collected
cd8_hladr_single_positive_cells
not collected
cd8_percent
not collected
cholesterol_drugs_1mo
No
cholesterol_mg_usda
213.67
cohort
HIV negative MSW
collection_timestamp
3/31/16
constipation_24hr_new
NO
copper_mg_usda
1.08
crp_ng_ml
6340.235722
decreased_stools_new
1
dietary_fiber_g_usda
16.62
elevation
5,403
empo_1
Host-associated
empo_2
Animal-associated
empo_3
Animal distal gut
energy_kcal_usda
1885.31
env biome
Urban Biome
env feature
Human-associated habitat
env package
human-gut
env_material
feces
eructation_new
1
excess_gas_24hr_new
NO
five_opposite_sex_partners_6mo_new
No
folate_dfe_mcg_usda
618.58
folic_acid_mcg_usda
252.7
food_folate_mcg_usda
188.99
gender
male
gi_summary_score
1.142857143
glucose
85
gm_csf_pg_ml
0.156184235
gramwt_g_usda
3418.88
hard_stools_new
1
hdl
36
heartburn_new
2
hispanic
No
host age
31
host body habitat
colon
host body mass index
24.6
host body product
feces
host common name
human
host height
164
host scientific name
Homo sapiens
host subject id
HIV191
host taxid
9606
host weight
66.2
host_age_units
years
host_height_units
cm
host_weight_units
kg
icam_1_ng_ml
398.2974767
ifabp_pg_ml
883.834
il_10_pg_ml
204.9428945
il_12_23p40_pg_ml
164.7112235
il_15_pg_ml
2.834842387
il_16_pg_ml
346.8863653
il_17a_pg_ml
2.080574909
il_22_pg_ml
183.839
il_6_pg_ml
207.147424
il_7_pg_ml
12.20567683
incomplete_evacuation_new
1
increased_flatus_new
1
increased_stools_new
1
insulin
4
intercourse_w_hiv_partner_12mo_new
No
intercourse_w_ivdu_partner_12mo_new
No
iron_mg_usda
14.58
ivdu_12mo_new
No
ivdu_ever_new
No
lattitude
39.742 N
lbp_ng_ml
10415.41353
ldl
90
leptin
9.3
lognitude
104.838 W
loose_stools_24hr_new
NO
loose_stools_diarrhea_new
1
lutein_zeaxanthin_mcg_usda
686.41
lycopene_mcg_usda
4065.44
lymphocyte_count
not collected
lymphocyte_percent
not collected
magnesium_mg_usda
279.11
mcp_1_pg_ml
9381.098599
metab_disease_score_binary
LOW
metabolic_disease_score
1.340901075
metabolome_data
No
metformin_1mo
No
mfa_16_1_hexadecenoic_acid_g_usda
1.13
mfa_18_1_octadecenoic_acid_g_usda
24.63
mfa_20_1_eicosenoic_acid_g_usda
0.11
mfa_22_1_docosenoic_acid_g_usda
0.01
money_drugs_gifts_for_sex_12mo_new
No
mped_a_bev_usda
0.46
mped_add_sug_usda
16.16
mped_dairy_cheese_usda
2.01
mped_dairy_milk_usda
0.65
mped_dairy_total_usda
3.02
mped_dairy_yogurt_usda
0.34
mped_discfat_oil_usda
10.03
mped_discfat_sol_usda
49.45
mped_fruit_citmlb_usda
0.26
mped_fruit_other_usda
2.11
mped_fruit_total_usda
2.36
mped_grain_nwhl_usda
4.19
mped_grain_total_usda
4.71
mped_grain_whl_usda
0.51
mped_legumes_usda
0.03
mped_m_egg_usda
0.52
mped_m_fish_hi_usda
0
mped_m_fish_lo_usda
0.04
mped_m_frank_usda
0.24
mped_m_meat_usda
1.05
mped_m_mpf_usda
1.64
mped_m_nutsd_usda
0.16
mped_m_organ_usda
0
mped_m_poult_usda
0.31
mped_m_soy_usda
0.06
mped_vegetable_dpyel_usda
0.03
mped_vegetable_drkgr_usda
0.02
mped_vegetable_other_usda
0.19
mped_vegetable_potato_usda
0.35
mped_vegetable_starcy_usda
0.03
mped_vegetable_tomato_usda
0.22
mped_vegetable_total_usda
0.84
nausea_vomiting_24hr_new
NO
nausea_vomiting_new
2
new_sti_12mo_new
No
niacin_mg_usda
18.59
no_symptoms_24hr_new
YES
orientation_new
Heterosexual
pfa_18_2_octadecadienoic_acid_g_usda
8.26
pfa_18_3_octadecatrienoic_acig_g_usda
1.13
pfa_18_4_octadecatetraenoic_acid_g_usda
0
pfa_20_4_eicosatetraenoic_acid_g_usda
0.06
pfa_20_5_eicosapentaenoic_acid_g_usda
0
pfa_22_5_docosapentaenoic_acid_g_usda
0
pfa_22_6_docosahexaenoic_acid_g_usda
0.01
phosphorus_mg_usda
1428.71
physical_specimen_location
University of Colorado AMC
potassium_mg_usda
2907.4
probiotics_1wk
No
protein_g_usda
66.35
race
White
rai_frequency_new
Never
relationship_status_new
Single
retinol_mcg_usda
478.67
riboflavin_vitamin_b2_mg_usda
2.61
saa_ng_ml
4211.709651
sample name
qiita_sid_13338:13338.St.neg.GLD090.b
sample type
stool
scd14_pg_ml
1631483.776
scd163_ng_ml
361.69035
selenium_mcg_usda
76.71
sfa_10_0_decanoic_acid_g_usda
0.66
sfa_12_0_dodecanoic_acid_g_usda
0.74
sfa_14_0_tetradecanoic_acid_g_usda
3.29
sfa_16_0_hexadecanoic_acid_g_usda
13.89
sfa_18_0_octadecanoic_acid_g_usda
6.36
sfa_4_0_butanoic_acid_g_usda
0.96
sfa_6_0_hexanoic_acid_g_usda
0.48
sfa_8_0_octanoic_acid_g_usda
0.39
sodium_mg_usda
2731.8
statins_1mo
No
thiamin_vitamin_b1_mg_usda
1.49
three_male_mtf_partners_anal_intercourse_6mo_new
No
tnf_alpha_pg_ml
823.3235458
tnf_beta_pg_ml
0.151166326
total_fat_g_usda
70.26
total_folate_mcg_usda
441.68
total_monounsaturated_fatty_acids_g_usda
26.34
total_polyunsaturated_fatty_acids_g_usda
9.78
total_saturated_fatty_acids_g_usda
27.48
total_sugars_g_usda
122.4
triglycerides
138
unprotexted_anal_intercourse_male_mtf_6mo_new
No
urgent_defection_new
1
vcam_1_ng_ml
562.0921559
vegf_pg_ml
91.19157956
vitamin_a_rae_mcg_usda
555.66
vitamin_b12_mcg_usda
6.37
vitamin_b6_mg_usda
2.42
vitamin_c_mg_usda
78.52
vitamin_e_as_alpha_tocopherol_mg_usda
5.38
vitamin_k_mcg_usda
47.92
watery_diarrhea_24hr_new
NO
zinc_mg_usda
11.64