13338.St.neg.GLD066
ENA first public
2021-04-17
ENA last update
2020-11-24
External Id
SAMEA7617091
INSDC center alias
UCSDMI
INSDC center name
University of California San Diego Microbiome Initiative
INSDC first public
2021-04-17T00:26:13Z
INSDC last update
2020-11-24T22:15:20Z
INSDC status
public
Submitter Id
qiita_sid_13338:13338.St.neg.GLD066
abdominal_distension_new
2
abdominal_pain_24hr_new
NO
abdominal_pains_new
1
abx_non_exclusion
No
acid_regurgitation_new
2
adiponectin
11.2
alcohol_g_usda
0.01
alpha_carotene_mcg_usda
2016.35
beta_carotene_mcg_usda
6357.9
beta_cryptoxanthin_mcg_usda
326.25
bloating_24hr_new
NO
borborygmus_new
2
bristol_stool_scale_sample
3
caffeine_mg_usda
2.1
calcium_mg_usda
1075.75
carbohydrate_g_usda
257.41
cd4_cd38_single_positive_cells
not collected
cd4_count
not collected
cd4_hladr_cd38_percent
not collected
cd4_hladr_single_positive_cells
not collected
cd4_percent
not collected
cd8_cd38_single_positive_cells
not collected
cd8_count
not collected
cd8_hladr_cd38_percent
not collected
cd8_hladr_single_positive_cells
not collected
cd8_percent
not collected
cholesterol_drugs_1mo
No
cholesterol_mg_usda
198.97
cohort
HIV negative MSW
collection_timestamp
12/29/15
constipation_24hr_new
NO
copper_mg_usda
1.47
crp_ng_ml
283.2155239
decreased_stools_new
1
dietary_fiber_g_usda
22.72
elevation
5,403
empo_1
Host-associated
empo_2
Animal-associated
empo_3
Animal distal gut
energy_kcal_usda
2010.55
env biome
Urban Biome
env feature
Human-associated habitat
env package
human-gut
env_material
feces
eructation_new
2
excess_gas_24hr_new
NO
five_opposite_sex_partners_6mo_new
No
folate_dfe_mcg_usda
609.31
folic_acid_mcg_usda
201.46
food_folate_mcg_usda
266.9
gender
male
gi_summary_score
1.5
glucose
85
gm_csf_pg_ml
0.367254804
gramwt_g_usda
3593.88
hard_stools_new
1
hdl
39
heartburn_new
2
hispanic
No
host age
23
host body habitat
colon
host body mass index
22.7
host body product
feces
host common name
human
host height
166
host scientific name
Homo sapiens
host subject id
HIV176
host taxid
9606
host weight
62.6
host_age_units
years
host_height_units
cm
host_weight_units
kg
icam_1_ng_ml
341.8639812
ifabp_pg_ml
3755.652
il_10_pg_ml
329.1410227
il_12_23p40_pg_ml
310.4129603
il_15_pg_ml
3.59250884
il_16_pg_ml
997.3433718
il_17a_pg_ml
3.269436055
il_22_pg_ml
226.8489715
il_6_pg_ml
317.6284094
il_7_pg_ml
14.82171701
incomplete_evacuation_new
2
increased_flatus_new
2
increased_stools_new
1
insulin
5
intercourse_w_hiv_partner_12mo_new
No
intercourse_w_ivdu_partner_12mo_new
No
iron_mg_usda
15.3
ivdu_12mo_new
No
ivdu_ever_new
No
lattitude
39.742 N
lbp_ng_ml
10231.41892
ldl
104
leptin
8.6
lognitude
104.838 W
loose_stools_24hr_new
NO
loose_stools_diarrhea_new
1
lutein_zeaxanthin_mcg_usda
2399.45
lycopene_mcg_usda
9366.07
lymphocyte_count
not collected
lymphocyte_percent
not collected
magnesium_mg_usda
295.29
mcp_1_pg_ml
10571.84391
metab_disease_score_binary
LOW
metabolic_disease_score
1.306462992
metabolome_data
No
metformin_1mo
No
mfa_16_1_hexadecenoic_acid_g_usda
1.29
mfa_18_1_octadecenoic_acid_g_usda
27.05
mfa_20_1_eicosenoic_acid_g_usda
0.2
mfa_22_1_docosenoic_acid_g_usda
0.03
money_drugs_gifts_for_sex_12mo_new
No
mped_a_bev_usda
0
mped_add_sug_usda
10.33
mped_dairy_cheese_usda
0.89
mped_dairy_milk_usda
1.12
mped_dairy_total_usda
2.04
mped_dairy_yogurt_usda
0.02
mped_discfat_oil_usda
21.94
mped_discfat_sol_usda
43.6
mped_fruit_citmlb_usda
0.96
mped_fruit_other_usda
0.77
mped_fruit_total_usda
1.73
mped_grain_nwhl_usda
6.28
mped_grain_total_usda
6.89
mped_grain_whl_usda
0.61
mped_legumes_usda
0.21
mped_m_egg_usda
0.21
mped_m_fish_hi_usda
0.09
mped_m_fish_lo_usda
0.08
mped_m_frank_usda
0.47
mped_m_meat_usda
1.63
mped_m_mpf_usda
3.1
mped_m_nutsd_usda
0.33
mped_m_organ_usda
0.01
mped_m_poult_usda
0.82
mped_m_soy_usda
0.01
mped_vegetable_dpyel_usda
0.44
mped_vegetable_drkgr_usda
0.2
mped_vegetable_other_usda
0.92
mped_vegetable_potato_usda
0.6
mped_vegetable_starcy_usda
0.24
mped_vegetable_tomato_usda
0.51
mped_vegetable_total_usda
2.91
nausea_vomiting_24hr_new
NO
nausea_vomiting_new
1
new_sti_12mo_new
No
niacin_mg_usda
21.86
no_symptoms_24hr_new
YES
orientation_new
Heterosexual
pfa_18_2_octadecadienoic_acid_g_usda
15.25
pfa_18_3_octadecatrienoic_acig_g_usda
1.61
pfa_18_4_octadecatetraenoic_acid_g_usda
0
pfa_20_4_eicosatetraenoic_acid_g_usda
0.08
pfa_20_5_eicosapentaenoic_acid_g_usda
0.02
pfa_22_5_docosapentaenoic_acid_g_usda
0.01
pfa_22_6_docosahexaenoic_acid_g_usda
0.04
phosphorus_mg_usda
1265.33
physical_specimen_location
University of Colorado AMC
potassium_mg_usda
3091.12
probiotics_1wk
No
protein_g_usda
75.36
race
White
rai_frequency_new
Never
relationship_status_new
Married/Living with partner
retinol_mcg_usda
392.73
riboflavin_vitamin_b2_mg_usda
2.08
saa_ng_ml
454.4038389
sample name
qiita_sid_13338:13338.St.neg.GLD066
sample type
stool
scd14_pg_ml
1067767.238
scd163_ng_ml
809.231148
selenium_mcg_usda
94.26
sfa_10_0_decanoic_acid_g_usda
0.45
sfa_12_0_dodecanoic_acid_g_usda
0.57
sfa_14_0_tetradecanoic_acid_g_usda
2.39
sfa_16_0_hexadecanoic_acid_g_usda
14.92
sfa_18_0_octadecanoic_acid_g_usda
6.59
sfa_4_0_butanoic_acid_g_usda
0.62
sfa_6_0_hexanoic_acid_g_usda
0.31
sfa_8_0_octanoic_acid_g_usda
0.22
sodium_mg_usda
3571.14
statins_1mo
No
thiamin_vitamin_b1_mg_usda
1.69
three_male_mtf_partners_anal_intercourse_6mo_new
No
tnf_alpha_pg_ml
804.0903314
tnf_beta_pg_ml
0.477552735
total_fat_g_usda
79.7
total_folate_mcg_usda
468.2
total_monounsaturated_fatty_acids_g_usda
29.01
total_polyunsaturated_fatty_acids_g_usda
17.22
total_saturated_fatty_acids_g_usda
26.87
total_sugars_g_usda
100.87
triglycerides
149
unprotexted_anal_intercourse_male_mtf_6mo_new
No
urgent_defection_new
1
vcam_1_ng_ml
465.0650356
vegf_pg_ml
70.0567703
vitamin_a_rae_mcg_usda
1020.44
vitamin_b12_mcg_usda
4.75
vitamin_b6_mg_usda
2.03
vitamin_c_mg_usda
146.72
vitamin_e_as_alpha_tocopherol_mg_usda
7.78
vitamin_k_mcg_usda
126.14
watery_diarrhea_24hr_new
NO
zinc_mg_usda
11.82