collection_date
2016-06-03
env_broad_scale
Marine environment
env_local_scale
Marine mammal
env_medium
rectal swab sample
geo_loc_name
USA: California
extraction_date
2017-10-17
extracted_by
ADS
sequencing_lane
1
host
southern_sea_otter
lat_lon
missing
host_taxid
1049777
BarcodeSequence
TCATTAGCGTGG
LinkerPrimerSequence
AATGATACGGCGACCACCGAGATCTACACGCT
ForwardPrimer
GTGYCAGCMGCCGCGGTAA
ReversePrimer
CAAGCAGAAGACGGCATACGAGATAGTCAGCCAGCCGGACTACNVGGGTWTCTAAT
PlateNumber
Plate 2
WellPosition
H1
PrimerPosition
Plate 2_H1
PCRPlatePosition
Plate 2_H1
facility
wild
shotgun_sequencing_performed
no
host_subject_id
1365
gps_number
216218
capture_location
Cypress Parking
sex
female
age
adult
weight (kgs)
22
captive
no
part_of_diet_shift_study
no
diet_abalone_unidentified
0.001390996
diet_algae_with_invertebrate_fauna
0
diet_pomaulax_gibberosus
0
diet_black_abalone
0
diet_barnacle_various_sp
0
diet_bat_star
0
diet_black_turbin_snail
0
diet_bivalve_unidentified
0
diet_brittle_star
0
diet_brown_turbin_snail
0
diet_pacific_rock_crab
0.002573797
diet_cancer_magister
0
diet_cancer_crab_unidentified
0.008922135
diet_red_rock_crab
0.002188281
diet_chiton_various_sp
0
diet_nuttalls_cockle
0
diet_clam_unidentified
0
diet_cucumaria_sp
0
diet_cockle_unidentified
0
diet_crab_unidentified
0.005362699
diet_crustacean_unidentified
0
diet_parastichopus_californicus
0
diet_decorator_crab
0
diet_sand_dollar
0
diet_cancer_magister2
0
diet_echiuris_sp
0.004777591
diet_fisg_egg_mass
0
diet_fish_various_spp
0
diet_gaper_clam
0
diet_sunset_clam
0
diet_snail_unidentified
0
diet_geoduck_clam
0
diet_gooseneck_barnacle
0
diet_green_crab
0
diet_cryptochiton_stelleri
0
diet_henricia_sp
0
diet_hermit_crab
0
diet_isopod
0
diet_pododesmus_macrochisma
0
diet_jackknife_clam
0
diet_pugettia_sp
0.013921742
diet_limpet_unidentified
0
diet_littleneck_clam
0
diet_spiny_lobster
0
diet_loxorhynchus_grandis
0
diet_macoma_sp
0
diet_modiolus_modiolus
0
diet_mollusc_unidentified
0
diet_moon_snail
0
diet_upogebia_sp
0
diet_mussel_unidentified
12.4159247
diet_mya_sp
0
diet_nassa_fossatus
0
diet_nereis_sp_pile_worm
0
diet_nudibranch
0
diet_pisaster_sp
0
diet_octopus_unidentified
0
diet_sipunculus_nudus
0
diet_penaeid_shrimp
0
diet_rough_piddock_clam
0
diet_pismo_clam
0
diet_polychaete_worm
0
diet_pacific_sand_crab
0
diet_strongylocentrotus_purpatus
0.015738572
diet_pycnopodia_helianthoides
0
diet_red_abalone
0.004445163
diet_rock_crab_unidentified
0.002072369
diet_red_urchin
0
diet_rock_or_stone
0
diet_razor_clam
0
diet_scallop_various_sp
0
diet_sand_crab
0
diet_giant_rock_scallop
0
diet_empty_shell
0
diet_shore_crab
0
diet_shrimp_unidentified
0
diet_spiny_mole_crab
0
diet_sponge
0
diet_squid_unidentified
0.006119696
diet_sea_star_unidentified
0
diet_stenoplax_chiton
0
diet_california_stichopus
0
diet_styela_sp
0
diet_surf_clam
0
diet_solaster_sp
0
diet_tegula_sp
0
diet_orange_puffball_sponge
0
diet_tellina_sp
0
diet_tonicella_sp
0
diet_calliostoma_sp
0
diet_colonial_tunicates
0
diet_tube_worm_colonial
0
diet_tube_worm_solitary
0
diet_urchin_unidentified
0
diet_saxidomus_nuttalli
0.001063932
diet_worm_unidentified
0
diet_wormLike_prey
0
diet_megastrea_sp
0
BioSampleModel
MIMARKS.survey
BioSampleModel
MIGS/MIMS/MIMARKS.host-associated