13338.St.neg.GLD124.b
ENA first public
2021-04-17
ENA last update
2020-11-24
External Id
SAMEA7617105
INSDC center alias
UCSDMI
INSDC center name
University of California San Diego Microbiome Initiative
INSDC first public
2021-04-17T00:26:13Z
INSDC last update
2020-11-24T22:15:21Z
INSDC status
public
Submitter Id
qiita_sid_13338:13338.St.neg.GLD124.b
abdominal_distension_new
1
abdominal_pain_24hr_new
NO
abdominal_pains_new
1
abx_non_exclusion
No
acid_regurgitation_new
2
adiponectin
23.3
alcohol_g_usda
48.25
alpha_carotene_mcg_usda
360.73
beta_carotene_mcg_usda
2685.32
beta_cryptoxanthin_mcg_usda
102.86
bloating_24hr_new
NO
borborygmus_new
1
bristol_stool_scale_sample
2
caffeine_mg_usda
584.56
calcium_mg_usda
2083.16
carbohydrate_g_usda
459.9
cd4_cd38_single_positive_cells
not collected
cd4_count
not collected
cd4_hladr_cd38_percent
not collected
cd4_hladr_single_positive_cells
not collected
cd4_percent
not collected
cd8_cd38_single_positive_cells
not collected
cd8_count
not collected
cd8_hladr_cd38_percent
not collected
cd8_hladr_single_positive_cells
not collected
cd8_percent
not collected
cholesterol_drugs_1mo
No
cholesterol_mg_usda
374.93
cohort
HIV negative MSW
collection_timestamp
5/26/16
constipation_24hr_new
YES
copper_mg_usda
2.32
crp_ng_ml
3390.667905
decreased_stools_new
2
dietary_fiber_g_usda
21.82
elevation
5,403
empo_1
Host-associated
empo_2
Animal-associated
empo_3
Animal distal gut
energy_kcal_usda
3885.62
env biome
Urban Biome
env feature
Human-associated habitat
env package
human-gut
env_material
feces
eructation_new
1
excess_gas_24hr_new
NO
five_opposite_sex_partners_6mo_new
No
folate_dfe_mcg_usda
958.11
folic_acid_mcg_usda
343.76
food_folate_mcg_usda
373.41
gender
male
gi_summary_score
1.5
glucose
90
gm_csf_pg_ml
0.249791861
gramwt_g_usda
6610.41
hard_stools_new
2
hdl
70
heartburn_new
2
hispanic
No
host age
68
host body habitat
colon
host body mass index
19.6
host body product
feces
host common name
human
host height
185
host scientific name
Homo sapiens
host subject id
HIV216
host taxid
9606
host weight
67
host_age_units
years
host_height_units
cm
host_weight_units
kg
icam_1_ng_ml
400.7656373
ifabp_pg_ml
3092.468
il_10_pg_ml
250.8758617
il_12_23p40_pg_ml
187.5837792
il_15_pg_ml
3.138119619
il_16_pg_ml
261.087435
il_17a_pg_ml
2.109517639
il_22_pg_ml
365.6352709
il_6_pg_ml
415.9752332
il_7_pg_ml
8.117714575
incomplete_evacuation_new
1
increased_flatus_new
1
increased_stools_new
1
insulin
2
intercourse_w_hiv_partner_12mo_new
Yes
intercourse_w_ivdu_partner_12mo_new
No
iron_mg_usda
28.21
ivdu_12mo_new
No
ivdu_ever_new
No
lattitude
39.742 N
lbp_ng_ml
14156.01504
ldl
87
leptin
2.7
lognitude
104.838 W
loose_stools_24hr_new
YES
loose_stools_diarrhea_new
2
lutein_zeaxanthin_mcg_usda
1906.67
lycopene_mcg_usda
10695.87
lymphocyte_count
not collected
lymphocyte_percent
not collected
magnesium_mg_usda
606.85
mcp_1_pg_ml
8436.176623
metab_disease_score_binary
LOW
metabolic_disease_score
0.55610638
metabolome_data
No
metformin_1mo
No
mfa_16_1_hexadecenoic_acid_g_usda
1.63
mfa_18_1_octadecenoic_acid_g_usda
47.22
mfa_20_1_eicosenoic_acid_g_usda
0.4
mfa_22_1_docosenoic_acid_g_usda
0.05
money_drugs_gifts_for_sex_12mo_new
No
mped_a_bev_usda
3.24
mped_add_sug_usda
52.77
mped_dairy_cheese_usda
0.34
mped_dairy_milk_usda
4.39
mped_dairy_total_usda
4.94
mped_dairy_yogurt_usda
0.21
mped_discfat_oil_usda
41.19
mped_discfat_sol_usda
80.77
mped_fruit_citmlb_usda
0.56
mped_fruit_other_usda
0.69
mped_fruit_total_usda
1.25
mped_grain_nwhl_usda
5.27
mped_grain_total_usda
6.09
mped_grain_whl_usda
0.82
mped_legumes_usda
0.11
mped_m_egg_usda
0.28
mped_m_fish_hi_usda
0.31
mped_m_fish_lo_usda
0.58
mped_m_frank_usda
0.3
mped_m_meat_usda
2.48
mped_m_mpf_usda
4.2
mped_m_nutsd_usda
2.2
mped_m_organ_usda
0.01
mped_m_poult_usda
0.52
mped_m_soy_usda
0.04
mped_vegetable_dpyel_usda
0.07
mped_vegetable_drkgr_usda
0.12
mped_vegetable_other_usda
0.83
mped_vegetable_potato_usda
0.6
mped_vegetable_starcy_usda
0.12
mped_vegetable_tomato_usda
0.53
mped_vegetable_total_usda
2.28
nausea_vomiting_24hr_new
YES
nausea_vomiting_new
2
new_sti_12mo_new
No
niacin_mg_usda
38.87
no_symptoms_24hr_new
NO
orientation_new
Heterosexual
pfa_18_2_octadecadienoic_acid_g_usda
24.89
pfa_18_3_octadecatrienoic_acig_g_usda
2.79
pfa_18_4_octadecatetraenoic_acid_g_usda
0.02
pfa_20_4_eicosatetraenoic_acid_g_usda
0.1
pfa_20_5_eicosapentaenoic_acid_g_usda
0.08
pfa_22_5_docosapentaenoic_acid_g_usda
0.02
pfa_22_6_docosahexaenoic_acid_g_usda
0.11
phosphorus_mg_usda
2428.91
physical_specimen_location
University of Colorado AMC
potassium_mg_usda
5845.12
probiotics_1wk
No
protein_g_usda
119.62
race
White
rai_frequency_new
Never
relationship_status_new
Single
retinol_mcg_usda
1249.45
riboflavin_vitamin_b2_mg_usda
5.28
saa_ng_ml
2569.837238
sample name
qiita_sid_13338:13338.St.neg.GLD124.b
sample type
stool
scd14_pg_ml
1812897.813
scd163_ng_ml
507.9263405
selenium_mcg_usda
133.16
sfa_10_0_decanoic_acid_g_usda
1.36
sfa_12_0_dodecanoic_acid_g_usda
1.59
sfa_14_0_tetradecanoic_acid_g_usda
6.03
sfa_16_0_hexadecanoic_acid_g_usda
27.69
sfa_18_0_octadecanoic_acid_g_usda
11.84
sfa_4_0_butanoic_acid_g_usda
1.61
sfa_6_0_hexanoic_acid_g_usda
1.12
sfa_8_0_octanoic_acid_g_usda
0.89
sodium_mg_usda
4456.67
statins_1mo
No
thiamin_vitamin_b1_mg_usda
2.84
three_male_mtf_partners_anal_intercourse_6mo_new
No
tnf_alpha_pg_ml
675.9843268
tnf_beta_pg_ml
0.102545355
total_fat_g_usda
146.9
total_folate_mcg_usda
717.1
total_monounsaturated_fatty_acids_g_usda
49.83
total_polyunsaturated_fatty_acids_g_usda
28.21
total_saturated_fatty_acids_g_usda
53.74
total_sugars_g_usda
291.36
triglycerides
92
unprotexted_anal_intercourse_male_mtf_6mo_new
No
urgent_defection_new
2
vcam_1_ng_ml
517.6468536
vegf_pg_ml
41.83403402
vitamin_a_rae_mcg_usda
1491.74
vitamin_b12_mcg_usda
11.94
vitamin_b6_mg_usda
3.84
vitamin_c_mg_usda
118.52
vitamin_e_as_alpha_tocopherol_mg_usda
16.46
vitamin_k_mcg_usda
191.14
watery_diarrhea_24hr_new
YES
zinc_mg_usda
23.16