13338.St.neg.GLD096
ENA first public
2021-04-17
ENA last update
2020-11-24
External Id
SAMEA7617098
INSDC center alias
UCSDMI
INSDC center name
University of California San Diego Microbiome Initiative
INSDC first public
2021-04-17T00:26:21Z
INSDC last update
2020-11-24T22:15:20Z
INSDC status
public
Submitter Id
qiita_sid_13338:13338.St.neg.GLD096
abdominal_distension_new
1
abdominal_pain_24hr_new
NO
abdominal_pains_new
1
abx_non_exclusion
No
acid_regurgitation_new
1
adiponectin
14.4
alcohol_g_usda
5.21
alpha_carotene_mcg_usda
114.98
beta_carotene_mcg_usda
12024.51
beta_cryptoxanthin_mcg_usda
27.87
bloating_24hr_new
NO
borborygmus_new
1
bristol_stool_scale_sample
2
caffeine_mg_usda
1.93
calcium_mg_usda
482.94
carbohydrate_g_usda
46.25
cd4_cd38_single_positive_cells
not collected
cd4_count
not collected
cd4_hladr_cd38_percent
not collected
cd4_hladr_single_positive_cells
not collected
cd4_percent
not collected
cd8_cd38_single_positive_cells
not collected
cd8_count
not collected
cd8_hladr_cd38_percent
not collected
cd8_hladr_single_positive_cells
not collected
cd8_percent
not collected
cholesterol_drugs_1mo
No
cholesterol_mg_usda
75.8
cohort
HIV negative MSW
collection_timestamp
3/22/16
constipation_24hr_new
NO
copper_mg_usda
0.72
crp_ng_ml
357.7662695
decreased_stools_new
1
dietary_fiber_g_usda
8.01
elevation
5,403
empo_1
Host-associated
empo_2
Animal-associated
empo_3
Animal distal gut
energy_kcal_usda
530.11
env biome
Urban Biome
env feature
Human-associated habitat
env package
human-gut
env_material
feces
eructation_new
1
excess_gas_24hr_new
NO
five_opposite_sex_partners_6mo_new
No
folate_dfe_mcg_usda
315.47
folic_acid_mcg_usda
31.15
food_folate_mcg_usda
262.46
gender
male
gi_summary_score
1.071428571
glucose
89
gm_csf_pg_ml
0.249738104
gramwt_g_usda
1771
hard_stools_new
2
hdl
70
heartburn_new
1
hispanic
No
host age
23
host body habitat
colon
host body mass index
24.3
host body product
feces
host common name
human
host height
177
host scientific name
Homo sapiens
host subject id
HIV135
host taxid
9606
host weight
76
host_age_units
years
host_height_units
cm
host_weight_units
kg
icam_1_ng_ml
325.9219738
ifabp_pg_ml
3495.662
il_10_pg_ml
240.9525111
il_12_23p40_pg_ml
128.4454907
il_15_pg_ml
4.849085072
il_16_pg_ml
95.28267344
il_17a_pg_ml
2.354976266
il_22_pg_ml
173.8342424
il_6_pg_ml
241.1552022
il_7_pg_ml
3.756104119
incomplete_evacuation_new
1
increased_flatus_new
1
increased_stools_new
1
insulin
5
intercourse_w_hiv_partner_12mo_new
No
intercourse_w_ivdu_partner_12mo_new
No
iron_mg_usda
7.86
ivdu_12mo_new
No
ivdu_ever_new
No
lattitude
39.742 N
lbp_ng_ml
10077.06767
ldl
89
leptin
2
lognitude
104.838 W
loose_stools_24hr_new
NO
loose_stools_diarrhea_new
1
lutein_zeaxanthin_mcg_usda
21607.86
lycopene_mcg_usda
1067.1
lymphocyte_count
not collected
lymphocyte_percent
not collected
magnesium_mg_usda
208.13
mcp_1_pg_ml
9040.215934
metab_disease_score_binary
LOW
metabolic_disease_score
0.751086931
metabolome_data
No
metformin_1mo
No
mfa_16_1_hexadecenoic_acid_g_usda
0.44
mfa_18_1_octadecenoic_acid_g_usda
8.11
mfa_20_1_eicosenoic_acid_g_usda
0.07
mfa_22_1_docosenoic_acid_g_usda
0
money_drugs_gifts_for_sex_12mo_new
No
mped_a_bev_usda
0.4
mped_add_sug_usda
1.08
mped_dairy_cheese_usda
0.07
mped_dairy_milk_usda
0.28
mped_dairy_total_usda
0.4
mped_dairy_yogurt_usda
0.05
mped_discfat_oil_usda
4.65
mped_discfat_sol_usda
9.21
mped_fruit_citmlb_usda
0.03
mped_fruit_other_usda
0.13
mped_fruit_total_usda
0.17
mped_grain_nwhl_usda
0.75
mped_grain_total_usda
0.88
mped_grain_whl_usda
0.13
mped_legumes_usda
0.01
mped_m_egg_usda
0.01
mped_m_fish_hi_usda
0.09
mped_m_fish_lo_usda
0.28
mped_m_frank_usda
0.02
mped_m_meat_usda
1.91
mped_m_mpf_usda
2.3
mped_m_nutsd_usda
0.27
mped_m_organ_usda
0
mped_m_poult_usda
0.01
mped_m_soy_usda
0
mped_vegetable_dpyel_usda
0.02
mped_vegetable_drkgr_usda
1.24
mped_vegetable_other_usda
0.15
mped_vegetable_potato_usda
0.07
mped_vegetable_starcy_usda
0.01
mped_vegetable_tomato_usda
0.06
mped_vegetable_total_usda
1.55
nausea_vomiting_24hr_new
NO
nausea_vomiting_new
1
new_sti_12mo_new
No
niacin_mg_usda
7.53
no_symptoms_24hr_new
YES
orientation_new
Heterosexual
pfa_18_2_octadecadienoic_acid_g_usda
2.39
pfa_18_3_octadecatrienoic_acig_g_usda
0.5
pfa_18_4_octadecatetraenoic_acid_g_usda
0
pfa_20_4_eicosatetraenoic_acid_g_usda
0.03
pfa_20_5_eicosapentaenoic_acid_g_usda
0.03
pfa_22_5_docosapentaenoic_acid_g_usda
0.01
pfa_22_6_docosahexaenoic_acid_g_usda
0.03
phosphorus_mg_usda
430.7
physical_specimen_location
University of Colorado AMC
potassium_mg_usda
1369.16
probiotics_1wk
No
protein_g_usda
32.17
race
Asian
rai_frequency_new
Never
relationship_status_new
Single
retinol_mcg_usda
48.7
riboflavin_vitamin_b2_mg_usda
0.76
saa_ng_ml
218.7407447
sample name
qiita_sid_13338:13338.St.neg.GLD096
sample type
stool
scd14_pg_ml
1701067.242
scd163_ng_ml
690.2338754
selenium_mcg_usda
34.76
sfa_10_0_decanoic_acid_g_usda
0.12
sfa_12_0_dodecanoic_acid_g_usda
0.36
sfa_14_0_tetradecanoic_acid_g_usda
0.7
sfa_16_0_hexadecanoic_acid_g_usda
4.02
sfa_18_0_octadecanoic_acid_g_usda
1.81
sfa_4_0_butanoic_acid_g_usda
0.1
sfa_6_0_hexanoic_acid_g_usda
0.08
sfa_8_0_octanoic_acid_g_usda
0.11
sodium_mg_usda
865.48
statins_1mo
No
thiamin_vitamin_b1_mg_usda
0.41
three_male_mtf_partners_anal_intercourse_6mo_new
No
tnf_alpha_pg_ml
542.3038005
tnf_beta_pg_ml
0.140753421
total_fat_g_usda
21.74
total_folate_mcg_usda
293.53
total_monounsaturated_fatty_acids_g_usda
8.71
total_polyunsaturated_fatty_acids_g_usda
3.03
total_saturated_fatty_acids_g_usda
7.52
total_sugars_g_usda
14.29
triglycerides
89
unprotexted_anal_intercourse_male_mtf_6mo_new
No
urgent_defection_new
1
vcam_1_ng_ml
557.9537526
vegf_pg_ml
36.70617103
vitamin_a_rae_mcg_usda
1056.56
vitamin_b12_mcg_usda
2.37
vitamin_b6_mg_usda
0.87
vitamin_c_mg_usda
59.02
vitamin_e_as_alpha_tocopherol_mg_usda
5.74
vitamin_k_mcg_usda
966.64
watery_diarrhea_24hr_new
NO
zinc_mg_usda
6.17