Barcode92_MLZ-RI-2ND-GM
collected_by
Laboratorio Salud Pblica de Caldas (DTSC)
collection_date
2021-06-09
geo_loc_name
Colombia: Manizales
host
Homo sapiens
host_disease
COVID-19 mild disease
isolate
8272
isolation_source
nasopharyngeal swab
collection_method
swab
date_of_prior_sars_cov_2_infection
2021-27-04
date_of_sars_cov_2_vaccination
2021-04-16
exposure_event
Health care associated cluster
geo_loc_exposure
Colombia: Manizales
gisaid_accession
EPI_ISL_5239242
host_age
35
host_anatomical_part
nasopharynx
host_disease_outcome
Recovery
host_health_state
Healthy, no comorbidities
host_recent_travel_loc
None
host_sex
male
host_subject_id
09-06-21-8272
lat_lon
5.0661 N 75.4847 W
prior_sars_cov_2_infection
yes
purpose_of_sampling
Diagnostic testing
purpose_of_sequencing
Suspicion of early reinfection by other SARS-CoV-2 Variant
sars_cov_2_diag_gene_name_1
E (orf4)
sars_cov_2_diag_gene_name_2
N (orf9)
sars_cov_2_diag_pcr_ct_value_1
16
sars_cov_2_diag_pcr_ct_value_2
16
sequenced_by
Instituto Nacional de Salud
vaccine_received
Pfizer-BioNTech
virus_isolate_of_prior_infection
SARS-CoV-2/human/COL/MLZ-CAL-25-04/2020
BioSampleModel
SARS-CoV-2: clinical or host-associated