13338.St.neg.DM059.1
ENA first public
2021-04-17
ENA last update
2020-11-24
External Id
SAMEA7617072
INSDC center alias
UCSDMI
INSDC center name
University of California San Diego Microbiome Initiative
INSDC first public
2021-04-17T00:26:13Z
INSDC last update
2020-11-24T22:15:18Z
INSDC status
public
Submitter Id
qiita_sid_13338:13338.St.neg.DM059.1
abdominal_distension_new
2
abdominal_pain_24hr_new
NO
abdominal_pains_new
2
abx_non_exclusion
No
acid_regurgitation_new
1
adiponectin
31
alcohol_g_usda
not collected
alpha_carotene_mcg_usda
not collected
beta_carotene_mcg_usda
not collected
beta_cryptoxanthin_mcg_usda
not collected
bloating_24hr_new
NO
borborygmus_new
1
bristol_stool_scale_sample
3
caffeine_mg_usda
not collected
calcium_mg_usda
not collected
carbohydrate_g_usda
not collected
cd4_cd38_single_positive_cells
83
cd4_count
not collected
cd4_hladr_cd38_percent
2
cd4_hladr_single_positive_cells
1
cd4_percent
not collected
cd8_cd38_single_positive_cells
31
cd8_count
not collected
cd8_hladr_cd38_percent
4
cd8_hladr_single_positive_cells
2
cd8_percent
not collected
cholesterol_drugs_1mo
No
cholesterol_mg_usda
not collected
cohort
HIV negative MSW
collection_timestamp
8/31/17
constipation_24hr_new
NO
copper_mg_usda
not collected
crp_ng_ml
156.2907314
decreased_stools_new
1
dietary_fiber_g_usda
not collected
elevation
5,403
empo_1
Host-associated
empo_2
Animal-associated
empo_3
Animal distal gut
energy_kcal_usda
not collected
env biome
Urban Biome
env feature
Human-associated habitat
env package
human-gut
env_material
feces
eructation_new
1
excess_gas_24hr_new
NO
five_opposite_sex_partners_6mo_new
No
folate_dfe_mcg_usda
not collected
folic_acid_mcg_usda
not collected
food_folate_mcg_usda
not collected
gender
male
gi_summary_score
1.285714286
glucose
91
gm_csf_pg_ml
0.547697785
gramwt_g_usda
not collected
hard_stools_new
1
hdl
34
heartburn_new
1
hispanic
No
host age
24
host body habitat
colon
host body mass index
23.4
host body product
feces
host common name
human
host height
172
host scientific name
Homo sapiens
host subject id
HIV287
host taxid
9606
host weight
69.3
host_age_units
years
host_height_units
cm
host_weight_units
kg
icam_1_ng_ml
248.9079818
ifabp_pg_ml
778.117
il_10_pg_ml
245.4750228
il_12_23p40_pg_ml
283.999772
il_15_pg_ml
3.514551441
il_16_pg_ml
302.3936809
il_17a_pg_ml
3.294406734
il_22_pg_ml
139.7649017
il_6_pg_ml
316.0653703
il_7_pg_ml
11.53700956
incomplete_evacuation_new
1
increased_flatus_new
1
increased_stools_new
2
insulin
3
intercourse_w_hiv_partner_12mo_new
No
intercourse_w_ivdu_partner_12mo_new
No
iron_mg_usda
not collected
ivdu_12mo_new
No
ivdu_ever_new
No
lattitude
39.742 N
lbp_ng_ml
5293.144208
ldl
80
leptin
4.2
lognitude
104.838 W
loose_stools_24hr_new
NO
loose_stools_diarrhea_new
2
lutein_zeaxanthin_mcg_usda
not collected
lycopene_mcg_usda
not collected
lymphocyte_count
not collected
lymphocyte_percent
not collected
magnesium_mg_usda
not collected
mcp_1_pg_ml
8553.480901
metab_disease_score_binary
LOW
metabolic_disease_score
1.111864785
metabolome_data
No
metformin_1mo
No
mfa_16_1_hexadecenoic_acid_g_usda
not collected
mfa_18_1_octadecenoic_acid_g_usda
not collected
mfa_20_1_eicosenoic_acid_g_usda
not collected
mfa_22_1_docosenoic_acid_g_usda
not collected
money_drugs_gifts_for_sex_12mo_new
No
mped_a_bev_usda
not collected
mped_add_sug_usda
not collected
mped_dairy_cheese_usda
not collected
mped_dairy_milk_usda
not collected
mped_dairy_total_usda
not collected
mped_dairy_yogurt_usda
not collected
mped_discfat_oil_usda
not collected
mped_discfat_sol_usda
not collected
mped_fruit_citmlb_usda
not collected
mped_fruit_other_usda
not collected
mped_fruit_total_usda
not collected
mped_grain_nwhl_usda
not collected
mped_grain_total_usda
not collected
mped_grain_whl_usda
not collected
mped_legumes_usda
not collected
mped_m_egg_usda
not collected
mped_m_fish_hi_usda
not collected
mped_m_fish_lo_usda
not collected
mped_m_frank_usda
not collected
mped_m_meat_usda
not collected
mped_m_mpf_usda
not collected
mped_m_nutsd_usda
not collected
mped_m_organ_usda
not collected
mped_m_poult_usda
not collected
mped_m_soy_usda
not collected
mped_vegetable_dpyel_usda
not collected
mped_vegetable_drkgr_usda
not collected
mped_vegetable_other_usda
not collected
mped_vegetable_potato_usda
not collected
mped_vegetable_starcy_usda
not collected
mped_vegetable_tomato_usda
not collected
mped_vegetable_total_usda
not collected
nausea_vomiting_24hr_new
NO
nausea_vomiting_new
1
new_sti_12mo_new
No
niacin_mg_usda
not collected
no_symptoms_24hr_new
YES
orientation_new
Heterosexual
pfa_18_2_octadecadienoic_acid_g_usda
not collected
pfa_18_3_octadecatrienoic_acig_g_usda
not collected
pfa_18_4_octadecatetraenoic_acid_g_usda
not collected
pfa_20_4_eicosatetraenoic_acid_g_usda
not collected
pfa_20_5_eicosapentaenoic_acid_g_usda
not collected
pfa_22_5_docosapentaenoic_acid_g_usda
not collected
pfa_22_6_docosahexaenoic_acid_g_usda
not collected
phosphorus_mg_usda
not collected
physical_specimen_location
University of Colorado AMC
potassium_mg_usda
not collected
probiotics_1wk
not collected
protein_g_usda
not collected
race
Asian
rai_frequency_new
Never
relationship_status_new
Single
retinol_mcg_usda
not collected
riboflavin_vitamin_b2_mg_usda
not collected
saa_ng_ml
425.3788116
sample name
qiita_sid_13338:13338.St.neg.DM059.1
sample type
stool
scd14_pg_ml
1339865.397
scd163_ng_ml
274.9328391
selenium_mcg_usda
not collected
sfa_10_0_decanoic_acid_g_usda
not collected
sfa_12_0_dodecanoic_acid_g_usda
not collected
sfa_14_0_tetradecanoic_acid_g_usda
not collected
sfa_16_0_hexadecanoic_acid_g_usda
not collected
sfa_18_0_octadecanoic_acid_g_usda
not collected
sfa_4_0_butanoic_acid_g_usda
not collected
sfa_6_0_hexanoic_acid_g_usda
not collected
sfa_8_0_octanoic_acid_g_usda
not collected
sodium_mg_usda
not collected
statins_1mo
No
thiamin_vitamin_b1_mg_usda
not collected
three_male_mtf_partners_anal_intercourse_6mo_new
No
tnf_alpha_pg_ml
598.7946666
tnf_beta_pg_ml
0.250515862
total_fat_g_usda
not collected
total_folate_mcg_usda
not collected
total_monounsaturated_fatty_acids_g_usda
not collected
total_polyunsaturated_fatty_acids_g_usda
not collected
total_saturated_fatty_acids_g_usda
not collected
total_sugars_g_usda
not collected
triglycerides
130
unprotexted_anal_intercourse_male_mtf_6mo_new
No
urgent_defection_new
1
vcam_1_ng_ml
423.7404461
vegf_pg_ml
72.778017
vitamin_a_rae_mcg_usda
not collected
vitamin_b12_mcg_usda
not collected
vitamin_b6_mg_usda
not collected
vitamin_c_mg_usda
not collected
vitamin_e_as_alpha_tocopherol_mg_usda
not collected
vitamin_k_mcg_usda
not collected
watery_diarrhea_24hr_new
NO
zinc_mg_usda
not collected