13338.St.neg.GLD063
ENA first public
2021-04-17
ENA last update
2020-11-24
External Id
SAMEA7617090
INSDC center alias
UCSDMI
INSDC center name
University of California San Diego Microbiome Initiative
INSDC first public
2021-04-17T00:26:21Z
INSDC last update
2020-11-24T22:15:19Z
INSDC status
public
Submitter Id
qiita_sid_13338:13338.St.neg.GLD063
abdominal_distension_new
1
abdominal_pain_24hr_new
NO
abdominal_pains_new
1
abx_non_exclusion
No
acid_regurgitation_new
1
adiponectin
6.4
alcohol_g_usda
0.55
alpha_carotene_mcg_usda
562.4
beta_carotene_mcg_usda
2147.56
beta_cryptoxanthin_mcg_usda
49.23
bloating_24hr_new
NO
borborygmus_new
1
bristol_stool_scale_sample
3
caffeine_mg_usda
268.06
calcium_mg_usda
787.32
carbohydrate_g_usda
183.64
cd4_cd38_single_positive_cells
not collected
cd4_count
not collected
cd4_hladr_cd38_percent
not collected
cd4_hladr_single_positive_cells
not collected
cd4_percent
not collected
cd8_cd38_single_positive_cells
not collected
cd8_count
not collected
cd8_hladr_cd38_percent
not collected
cd8_hladr_single_positive_cells
not collected
cd8_percent
not collected
cholesterol_drugs_1mo
No
cholesterol_mg_usda
155.21
cohort
HIV negative MSW
collection_timestamp
12/16/15
constipation_24hr_new
NO
copper_mg_usda
0.81
crp_ng_ml
1575.163965
decreased_stools_new
1
dietary_fiber_g_usda
13.08
elevation
5,403
empo_1
Host-associated
empo_2
Animal-associated
empo_3
Animal distal gut
energy_kcal_usda
1409.5
env biome
Urban Biome
env feature
Human-associated habitat
env package
human-gut
env_material
feces
eructation_new
1
excess_gas_24hr_new
NO
five_opposite_sex_partners_6mo_new
No
folate_dfe_mcg_usda
339.43
folic_acid_mcg_usda
115.52
food_folate_mcg_usda
143.18
gender
male
gi_summary_score
1.142857143
glucose
95
gm_csf_pg_ml
0.367088058
gramwt_g_usda
2077.46
hard_stools_new
1
hdl
46
heartburn_new
1
hispanic
No
host age
37
host body habitat
colon
host body mass index
26.6
host body product
feces
host common name
human
host height
188
host scientific name
Homo sapiens
host subject id
HIV174
host taxid
9606
host weight
94
host_age_units
years
host_height_units
cm
host_weight_units
kg
icam_1_ng_ml
361.8523053
ifabp_pg_ml
2414.659
il_10_pg_ml
288.5633419
il_12_23p40_pg_ml
261.4752885
il_15_pg_ml
4.490344643
il_16_pg_ml
3769.196632
il_17a_pg_ml
3.094611066
il_22_pg_ml
248.7910511
il_6_pg_ml
244.5465602
il_7_pg_ml
31.53136413
incomplete_evacuation_new
1
increased_flatus_new
2
increased_stools_new
1
insulin
6
intercourse_w_hiv_partner_12mo_new
No
intercourse_w_ivdu_partner_12mo_new
No
iron_mg_usda
10.41
ivdu_12mo_new
No
ivdu_ever_new
No
lattitude
39.742 N
lbp_ng_ml
14944.25676
ldl
139
leptin
17.9
lognitude
104.838 W
loose_stools_24hr_new
NO
loose_stools_diarrhea_new
1
lutein_zeaxanthin_mcg_usda
450.35
lycopene_mcg_usda
2519.17
lymphocyte_count
not collected
lymphocyte_percent
not collected
magnesium_mg_usda
196.69
mcp_1_pg_ml
9323.780625
metab_disease_score_binary
LOW
metabolic_disease_score
1.318422183
metabolome_data
No
metformin_1mo
No
mfa_16_1_hexadecenoic_acid_g_usda
1.07
mfa_18_1_octadecenoic_acid_g_usda
16.59
mfa_20_1_eicosenoic_acid_g_usda
0.08
mfa_22_1_docosenoic_acid_g_usda
0.01
money_drugs_gifts_for_sex_12mo_new
No
mped_a_bev_usda
0.04
mped_add_sug_usda
14.18
mped_dairy_cheese_usda
1.47
mped_dairy_milk_usda
0.32
mped_dairy_total_usda
1.8
mped_dairy_yogurt_usda
0
mped_discfat_oil_usda
5.27
mped_discfat_sol_usda
33.03
mped_fruit_citmlb_usda
0.21
mped_fruit_other_usda
1.18
mped_fruit_total_usda
1.39
mped_grain_nwhl_usda
4.19
mped_grain_total_usda
5.63
mped_grain_whl_usda
1.44
mped_legumes_usda
0.01
mped_m_egg_usda
0.13
mped_m_fish_hi_usda
0.05
mped_m_fish_lo_usda
0.12
mped_m_frank_usda
1.09
mped_m_meat_usda
1.62
mped_m_mpf_usda
2.94
mped_m_nutsd_usda
0.23
mped_m_organ_usda
0
mped_m_poult_usda
0.04
mped_m_soy_usda
0.05
mped_vegetable_dpyel_usda
0.15
mped_vegetable_drkgr_usda
0.02
mped_vegetable_other_usda
0.12
mped_vegetable_potato_usda
0.04
mped_vegetable_starcy_usda
0
mped_vegetable_tomato_usda
0.19
mped_vegetable_total_usda
0.52
nausea_vomiting_24hr_new
NO
nausea_vomiting_new
1
new_sti_12mo_new
No
niacin_mg_usda
14.58
no_symptoms_24hr_new
YES
orientation_new
Heterosexual
pfa_18_2_octadecadienoic_acid_g_usda
5.93
pfa_18_3_octadecatrienoic_acig_g_usda
0.73
pfa_18_4_octadecatetraenoic_acid_g_usda
0
pfa_20_4_eicosatetraenoic_acid_g_usda
0.06
pfa_20_5_eicosapentaenoic_acid_g_usda
0.01
pfa_22_5_docosapentaenoic_acid_g_usda
0.01
pfa_22_6_docosahexaenoic_acid_g_usda
0.02
phosphorus_mg_usda
1047.49
physical_specimen_location
University of Colorado AMC
potassium_mg_usda
1911.45
probiotics_1wk
No
protein_g_usda
60.18
race
White
rai_frequency_new
Never
relationship_status_new
Single
retinol_mcg_usda
257.49
riboflavin_vitamin_b2_mg_usda
1.71
saa_ng_ml
3430.126997
sample name
qiita_sid_13338:13338.St.neg.GLD063
sample type
stool
scd14_pg_ml
881243.0448
scd163_ng_ml
837.6252233
selenium_mcg_usda
85.95
sfa_10_0_decanoic_acid_g_usda
0.37
sfa_12_0_dodecanoic_acid_g_usda
0.58
sfa_14_0_tetradecanoic_acid_g_usda
2.09
sfa_16_0_hexadecanoic_acid_g_usda
10.34
sfa_18_0_octadecanoic_acid_g_usda
5.05
sfa_4_0_butanoic_acid_g_usda
0.57
sfa_6_0_hexanoic_acid_g_usda
0.2
sfa_8_0_octanoic_acid_g_usda
0.2
sodium_mg_usda
2417.72
statins_1mo
No
thiamin_vitamin_b1_mg_usda
1.01
three_male_mtf_partners_anal_intercourse_6mo_new
No
tnf_alpha_pg_ml
802.0589424
tnf_beta_pg_ml
0.451066367
total_fat_g_usda
50.68
total_folate_mcg_usda
258.67
total_monounsaturated_fatty_acids_g_usda
18.33
total_polyunsaturated_fatty_acids_g_usda
6.84
total_saturated_fatty_acids_g_usda
19.94
total_sugars_g_usda
83.25
triglycerides
124
unprotexted_anal_intercourse_male_mtf_6mo_new
No
urgent_defection_new
2
vcam_1_ng_ml
492.5442631
vegf_pg_ml
56.08242667
vitamin_a_rae_mcg_usda
462.31
vitamin_b12_mcg_usda
3.68
vitamin_b6_mg_usda
1.14
vitamin_c_mg_usda
36.3
vitamin_e_as_alpha_tocopherol_mg_usda
3.43
vitamin_k_mcg_usda
37.09
watery_diarrhea_24hr_new
NO
zinc_mg_usda
9.02