13338.St.neg.GLD101
ENA first public
2021-04-17
ENA last update
2020-11-24
External Id
SAMEA7617099
INSDC center alias
UCSDMI
INSDC center name
University of California San Diego Microbiome Initiative
INSDC first public
2021-04-17T00:26:13Z
INSDC last update
2020-11-24T22:15:21Z
INSDC status
public
Submitter Id
qiita_sid_13338:13338.St.neg.GLD101
abdominal_distension_new
1
abdominal_pain_24hr_new
NO
abdominal_pains_new
1
abx_non_exclusion
No
acid_regurgitation_new
1
adiponectin
9.3
alcohol_g_usda
5.54
alpha_carotene_mcg_usda
2221.62
beta_carotene_mcg_usda
7589.66
beta_cryptoxanthin_mcg_usda
260.85
bloating_24hr_new
NO
borborygmus_new
1
bristol_stool_scale_sample
3
caffeine_mg_usda
3.92
calcium_mg_usda
735.4
carbohydrate_g_usda
289.11
cd4_cd38_single_positive_cells
not collected
cd4_count
not collected
cd4_hladr_cd38_percent
not collected
cd4_hladr_single_positive_cells
not collected
cd4_percent
not collected
cd8_cd38_single_positive_cells
not collected
cd8_count
not collected
cd8_hladr_cd38_percent
not collected
cd8_hladr_single_positive_cells
not collected
cd8_percent
not collected
cholesterol_drugs_1mo
No
cholesterol_mg_usda
295.18
cohort
HIV negative MSW
collection_timestamp
3/31/16
constipation_24hr_new
NO
copper_mg_usda
2.04
crp_ng_ml
187.718465
decreased_stools_new
1
dietary_fiber_g_usda
27.63
elevation
5,403
empo_1
Host-associated
empo_2
Animal-associated
empo_3
Animal distal gut
energy_kcal_usda
2458.96
env biome
Urban Biome
env feature
Human-associated habitat
env package
human-gut
env_material
feces
eructation_new
1
excess_gas_24hr_new
NO
five_opposite_sex_partners_6mo_new
No
folate_dfe_mcg_usda
856.2
folic_acid_mcg_usda
331.41
food_folate_mcg_usda
292.71
gender
male
gi_summary_score
1.214285714
glucose
85
gm_csf_pg_ml
0.143980408
gramwt_g_usda
2627.55
hard_stools_new
1
hdl
65
heartburn_new
1
hispanic
No
host age
34
host body habitat
colon
host body mass index
21.4
host body product
feces
host common name
human
host height
175.3
host scientific name
Homo sapiens
host subject id
HIV199
host taxid
9606
host weight
65.9
host_age_units
years
host_height_units
cm
host_weight_units
kg
icam_1_ng_ml
366.6561415
ifabp_pg_ml
2481.996
il_10_pg_ml
250.3180913
il_12_23p40_pg_ml
123.8974618
il_15_pg_ml
3.392812143
il_16_pg_ml
298.4185112
il_17a_pg_ml
1.84943437
il_22_pg_ml
184.38426
il_6_pg_ml
245.3711048
il_7_pg_ml
10.55750118
incomplete_evacuation_new
1
increased_flatus_new
2
increased_stools_new
1
insulin
1
intercourse_w_hiv_partner_12mo_new
No
intercourse_w_ivdu_partner_12mo_new
No
iron_mg_usda
23.71
ivdu_12mo_new
No
ivdu_ever_new
No
lattitude
39.742 N
lbp_ng_ml
5622.180451
ldl
106
leptin
1.7
lognitude
104.838 W
loose_stools_24hr_new
NO
loose_stools_diarrhea_new
2
lutein_zeaxanthin_mcg_usda
2399.97
lycopene_mcg_usda
7575.75
lymphocyte_count
not collected
lymphocyte_percent
not collected
magnesium_mg_usda
408.15
mcp_1_pg_ml
8349.949664
metab_disease_score_binary
LOW
metabolic_disease_score
0.750740672
metabolome_data
No
metformin_1mo
No
mfa_16_1_hexadecenoic_acid_g_usda
1.3
mfa_18_1_octadecenoic_acid_g_usda
41.02
mfa_20_1_eicosenoic_acid_g_usda
0.61
mfa_22_1_docosenoic_acid_g_usda
0.18
money_drugs_gifts_for_sex_12mo_new
No
mped_a_bev_usda
0.43
mped_add_sug_usda
7.62
mped_dairy_cheese_usda
0.28
mped_dairy_milk_usda
0.44
mped_dairy_total_usda
0.78
mped_dairy_yogurt_usda
0.05
mped_discfat_oil_usda
42.07
mped_discfat_sol_usda
28.74
mped_fruit_citmlb_usda
0.62
mped_fruit_other_usda
1.57
mped_fruit_total_usda
2.18
mped_grain_nwhl_usda
8.88
mped_grain_total_usda
10.23
mped_grain_whl_usda
1.35
mped_legumes_usda
0.12
mped_m_egg_usda
0.36
mped_m_fish_hi_usda
1.6
mped_m_fish_lo_usda
1.58
mped_m_frank_usda
3.02
mped_m_meat_usda
0.98
mped_m_mpf_usda
8.24
mped_m_nutsd_usda
2.92
mped_m_organ_usda
0.01
mped_m_poult_usda
1.06
mped_m_soy_usda
0.09
mped_vegetable_dpyel_usda
0.55
mped_vegetable_drkgr_usda
0.2
mped_vegetable_other_usda
0.36
mped_vegetable_potato_usda
0.1
mped_vegetable_starcy_usda
0.15
mped_vegetable_tomato_usda
0.5
mped_vegetable_total_usda
1.86
nausea_vomiting_24hr_new
NO
nausea_vomiting_new
1
new_sti_12mo_new
No
niacin_mg_usda
39.36
no_symptoms_24hr_new
YES
orientation_new
Heterosexual
pfa_18_2_octadecadienoic_acid_g_usda
19.08
pfa_18_3_octadecatrienoic_acig_g_usda
2.17
pfa_18_4_octadecatetraenoic_acid_g_usda
0.05
pfa_20_4_eicosatetraenoic_acid_g_usda
0.22
pfa_20_5_eicosapentaenoic_acid_g_usda
0.29
pfa_22_5_docosapentaenoic_acid_g_usda
0.09
pfa_22_6_docosahexaenoic_acid_g_usda
0.43
phosphorus_mg_usda
1562.78
physical_specimen_location
University of Colorado AMC
potassium_mg_usda
3255.8
probiotics_1wk
No
protein_g_usda
108.23
race
Asian
rai_frequency_new
Never
relationship_status_new
Single
retinol_mcg_usda
391.28
riboflavin_vitamin_b2_mg_usda
2.42
saa_ng_ml
603.8973001
sample name
qiita_sid_13338:13338.St.neg.GLD101
sample type
stool
scd14_pg_ml
1543261.881
scd163_ng_ml
500.7770254
selenium_mcg_usda
155.77
sfa_10_0_decanoic_acid_g_usda
0.3
sfa_12_0_dodecanoic_acid_g_usda
0.82
sfa_14_0_tetradecanoic_acid_g_usda
1.53
sfa_16_0_hexadecanoic_acid_g_usda
13.61
sfa_18_0_octadecanoic_acid_g_usda
5.52
sfa_4_0_butanoic_acid_g_usda
0.3
sfa_6_0_hexanoic_acid_g_usda
0.19
sfa_8_0_octanoic_acid_g_usda
0.22
sodium_mg_usda
4461.19
statins_1mo
No
thiamin_vitamin_b1_mg_usda
2.44
three_male_mtf_partners_anal_intercourse_6mo_new
No
tnf_alpha_pg_ml
693.5277067
tnf_beta_pg_ml
0.124301758
total_fat_g_usda
97.49
total_folate_mcg_usda
624.45
total_monounsaturated_fatty_acids_g_usda
43.61
total_polyunsaturated_fatty_acids_g_usda
22.63
total_saturated_fatty_acids_g_usda
23.82
total_sugars_g_usda
86.81
triglycerides
62
unprotexted_anal_intercourse_male_mtf_6mo_new
No
urgent_defection_new
2
vcam_1_ng_ml
550.1857673
vegf_pg_ml
104.6568488
vitamin_a_rae_mcg_usda
1127.67
vitamin_b12_mcg_usda
7.84
vitamin_b6_mg_usda
2.87
vitamin_c_mg_usda
115.51
vitamin_e_as_alpha_tocopherol_mg_usda
14.45
vitamin_k_mcg_usda
127.86
watery_diarrhea_24hr_new
NO
zinc_mg_usda
15.76