collection_date
2022-07-27
geo_loc_name
USA: Maryland
isolation_source
wastewater
collection_site_id
MD01
ww_population
29758
ww_sample_duration
24
ww_sample_matrix
raw wastewater
ww_sample_type
composite
collection_volume
1L
ww_surv_target_1
SARS-CoV-2
ww_surv_target_1_known_present
yes
collected_by
FDA Center for Food Safety and Applied Nutrition
purpose_of_ww_sampling
public health surveillance community-level
ww_flow
Not Collected
ww_industrial_effluent_percent
Not Collected
ww_ph
0.0
ww_population_source
wastewater treatment plant
ww_pre_treatment
Not Provided
ww_sample_site
wastewater treatment plant
ww_temperature
Not Collected
ww_total_suspended_solids
0
purpose_of_ww_sequencing
purpose of sequencing: detection of target organism by RT PCR or ddPCR
ww_endog_control_1
Not Applicable
ww_endog_control_1_conc
Not Applicable
ww_endog_control_1_protocol
Not Applicable
ww_endog_control_1_units
Not Applicable
ww_endog_control_2
Not Applicable
ww_surv_target_1_gene
N gene (N1)
ww_surv_target_1_protocol
GoTaq Enviro Wastewater SARS-CoV-2 Systems- Promega
ww_surv_target_2
Not Applicable
ww_surv_target_2_conc
Not Applicable
ww_surv_target_2_conc_unit
Not Applicable
ww_surv_target_2_gene
Not Applicable
ww_surv_target_2_known_present
Not Applicable
concentration_method
promega wastewater large volume tna capture kit
extraction_control
Not Applicable
extraction_method
promega automated tna kit
project_name
GenomeTrakr
ww_surv_target_1_conc_unit
Copies/L
ww_surv_jurisdiction
Not Provided
ww_primary_sludge_retention_time
Not Collected
ww_processing_protocol
Not Provided
ww_sample_salinity
Not Collected
lat_lon
missing
ww_surv_system_sample_id
CFSANSMP000120124
ProjectAccession
PRJNA757447
sample_name
pool24_rep2b_dil
specimen_processing
specimens pooled
specimen_processing_details
weekly pooling:composite_220721-07_27 biological replicates_3 technical replicates; tDNA diluted 1:1
specimen_processing_id
pool24_rep2b_dil
sample_title
SARS-CoV-2: wastewater surveillance
organism
wastewater metagenome
ww_endog_control_2_conc
Not Applicable
ww_endog_control_2_units
Not Applicable
BioSampleModel
SARS-CoV-2: wastewater surveillance