collection_date
2021-09-20
geo_loc_name
USA: Alabama
isolation_source
wastewater
collection_site_id
MOB
ww_population
250000
ww_sample_duration
0
ww_sample_matrix
raw wastewater
ww_sample_type
grab
collection_volume
25L
ww_surv_target_1
SARS-CoV-2
ww_surv_target_1_known_present
yes
collected_by
FDA Center for Food Safety and Applied Nutrition
purpose_of_ww_sampling
public health surveillance community-level
ww_flow
151037930
ww_industrial_effluent_percent
10
ww_ph
7.1
ww_population_source
utilities billing records
ww_pre_treatment
2 inch bar screener
ww_sample_site
wastewater treatment plant
ww_temperature
27
ww_total_suspended_solids
122
sequenced_by
North Carolina State University - Raleigh
ww_endog_control_1
Not Applicable
ww_endog_control_1_protocol
Not Applicable
ww_surv_target_1_gene
N gene (N1)
ww_surv_target_1_protocol
US CDC Real-Time Reverse Transcription PCR Panel for Detection of Severe Acute Respiratory Syndrome Coronavirus 2; https://wwwnc.cdc.gov/eid/article/26/8/20-1246_article
ww_surv_target_2
SARS-CoV-2
ww_surv_target_2_conc
453192
ww_surv_target_2_conc_unit
copies/L
ww_surv_target_2_gene
N gene (N2)
ww_surv_target_2_known_present
yes
ww_surv_target_2_protocol
US CDC Real-Time Reverse Transcription PCR Panel for Detection of Severe Acute Respiratory Syndrome Coronavirus 2; https://wwwnc.cdc.gov/eid/article/26/8/20-1246_article
concentration_method
membrane filtration with addition of mgcl2
extraction_method
qiagen rneasy kit
project_name
GenomeTrakr; LFFM ww project
ww_surv_target_1_conc
683745
ww_surv_target_1_conc_unit
copies/L
Center Name
NC_THAKUR_LAB_GT
isolate description
M1C092021_C.01
BioSampleModel
SARS-CoV-2: wastewater surveillance