collection_date
2021-09-20
geo_loc_name
USA: Alabama
isolation_source
wastewater
collection_site_id
MOB
ww_population
250000
ww_sample_duration
0
ww_sample_matrix
raw wastewater
ww_sample_type
grab
collection_volume
25L
ww_surv_target_1
SARS-CoV-2
ww_surv_target_1_known_present
yes
collected_by
FDA Center for Food Safety and Applied Nutrition
purpose_of_ww_sampling
public health surveillance community-level
ww_flow
151037930
ww_industrial_effluent_percent
10
ww_ph
7.1
ww_population_source
utilities billing records
ww_pre_treatment
2 inch bar screener
ww_sample_site
wastewater treatment plant
ww_temperature
27
ww_total_suspended_solids
122
sequenced_by
TGen North
ww_endog_control_1
Not Applicable
ww_endog_control_1_protocol
Not Applicable
ww_surv_target_1_gene
N gene (N2)
ww_surv_target_1_protocol
In-house designed and validated primers and probes were used targeting the N gene of SARS-CoV-2.
ww_surv_target_2
Not Applicable
ww_surv_target_2_conc
Not Applicable
ww_surv_target_2_conc_unit
Not Applicable
ww_surv_target_2_gene
Not Applicable
ww_surv_target_2_known_present
Not Applicable
ww_surv_target_2_protocol
Not Applicable
concentration_method
zymo environ water rna kit
extraction_control
Negative extraction control
extraction_method
zymo quick-rna viral kit
project_name
GenomeTrakr; LFFM ww project
ww_surv_target_1_conc
37.09641205
ww_surv_target_1_conc_unit
Ct value
Center Name
FDA_AZ
sample_alias
S2-MZ-RawExtraction
BioSampleModel
SARS-CoV-2: wastewater surveillance