subA-2 PAS grab 9am
collection_date
2021-11-30
geo_loc_name
USA: Alabama
isolation_source
wastewater
collection_site_id
PAS
ww_population
not collected
ww_sample_duration
0
ww_sample_matrix
raw wastewater
ww_sample_type
grab
collection_volume
1L
ww_surv_target_1
SARS-CoV-2
ww_surv_target_1_known_present
no
collected_by
FDA Center for Food Safety and Applied Nutrition
purpose_of_ww_sampling
public health surveillance community-level
ww_sample_site
wastewater treatment plant
sequenced_by
FDA Center for Food Safety and Applied Nutrition
ww_endog_control_1
crAssphage
ww_endog_control_1_protocol
RT-qPCR Detection of Process Controls (Murine noroviurs and crAssphage) from Wastewater using AB 7500 (protocols.io)
ww_surv_target_1_gene
N (N1)
ww_surv_target_1_protocol
RT-qPCR Detection of SARS-CoV-2 from Wastewater Using the AB 7500 (protocols.io)
ww_surv_target_2
SARS CoV 2
ww_surv_target_2_conc
0.00, 0.00, 0.00
ww_surv_target_2_conc_unit
Ct values
ww_surv_target_2_gene
N (N2)
ww_surv_target_2_known_present
no
ww_surv_target_2_protocol
RT-qPCR Detection of SARS-CoV-2 from Wastewater Using the AB 7500 (protocols.io)
concentration_method
peg precipitation + ultracentrifugation
extraction_control
Murine norovirus
extraction_method
qiagen rneasy kit
project_name
GenomeTrakr
ww_surv_target_1_conc
0.00, 0.00, 0.00
ww_surv_target_1_conc_unit
Ct values
BioSampleModel
SARS-CoV-2: wastewater surveillance