CDC Sars CoV2 Sequencing Baseline Constellation
Isolate
SARS-CoV-2/Human/USA/GA-CDC-STM-000720437/2021
collected_by
'Helix'
collection_date
2021-08-08
isolation_source
nasal swab
geo_loc_name
USA: Georgia
host
Homo sapiens
host_disease
COVID-19
host_sex
male
host_age
52
host_race
White
collection_device
Nasal swab
collection_method
Nasal swab
purpose_of_sequencing
baseline surveillance (random sampling)
diagnostic_gene_name_1
N
diagnostic_pcr_protocol_1
Helix COVID-19 Test
diagnostic_pcr_Ct_value_1
17.8805160522461
diagnostic_gene_name_2
ORF1ab
diagnostic_pcr_protocol_2
Helix COVID-19 Test
diagnostic_pcr_Ct_value_2
18.4393062591553
diagnostic_gene_name_3
S
diagnostic_pcr_protocol_3
Helix COVID-19 Test
diagnostic_pcr_Ct_value_3
17.9539356231689
lineage/clade name
AY.5
BioSampleModel
SARS-CoV-2: clinical or host-associated