SARS-CoV-2 Genome sequencing and assembly - HELIX
Isolate
SARS-CoV-2/Human/USA/GA-CDC-STM-000039381/2021
collected_by
Helix
collection_date
2021-03-19
isolation_source
nasal
geo_loc_name
USA: Georgia
lat_lon
missing
host
Homo sapiens
host_disease
COVID-19
host_sex
female
host_age
17
,host_race
White
host_anatomical_part
Nasal
collection_device
Swabs
collection_method
Swabs
diagnostic_gene_name_1
ms2
diagnostic_pcr_protocol_1
ThermoFisher Taqpath Assay
diagnostic_pcr_Ct_value_1
31.978225708
diagnostic_gene_name_2
n gene
diagnostic_pcr_protocol_2
ThermoFisher Taqpath Assay
diagnostic_pcr_Ct_value_2
25.838417053
diagnostic_gene_name_3
orf1ab
diagnostic_pcr_protocol_3
ThermoFisher Taqpath Assay
diagnostic_pcr_Ct_value_3
26.390895844
lineage/clade name
B.1.1.7
BioSampleModel
SARS-CoV-2: clinical or host-associated