ColPat_87
Protocols: One plant from each RIL or parental line was selected for DNA extraction Plant growth was under standart Arabidopsis culture conditions. Seeds were stratified in 0.1% agarose at 4°C 4 days. After germination, seedlings were transplanted to pots in a growth chamber at 23°C and long day (16/8 hs day/night). Total DNA was extracted according to Cao et al. (2011) \Whole-genome sequencing of multiple Arabidopsis thaliana populations\, https://doi.org/10.1038/ng.911 Libraries were prepared in the Gregor Mendel Institute of Molecular Plant Biology, using the Tn5 transposase protocol outlined in Pisupati et al. (2017) \Verification of Arabidopsis stock collections using SNPmatch, a tool for genotyping high-plexed samples\, https://www.nature.com/articles/sdata2017184
ENA first public
2021-07-21
ENA last update
2021-07-21
External Id
SAMEA8692525
INSDC center alias
IFEVA (CONICET-UBA), Facultad de Agronomia (FAUBA), Universidad de Buenos Aires (UBA)
INSDC center name
IFEVA (CONICET-UBA), Facultad de Agronomia (FAUBA), Universidad de Buenos Aires (UBA)
INSDC first public
2021-07-21T00:19:10Z
INSDC last update
2021-07-21T00:19:10Z
INSDC status
public
Submitter Id
E-MTAB-10387:ColPat_87
broker name
ArrayExpress
common name
thale cress
cultivar
RIL Col x Pat
developmental stage
sporophyte vegetative stage
growth condition
long day length regimen
individual
ColPat_87
organism part
whole organism
sample name
E-MTAB-10387:ColPat_87