CDC Sars CoV2 Sequencing Baseline Constellation
Isolate
SARS-CoV-2/Human/USA/FL-CDC-STM-000712578/2021
collected_by
'Helix'
collection_date
2021-07-26
isolation_source
nasal swab
geo_loc_name
USA: Florida
host
Homo sapiens
host_disease
COVID-19
host_sex
male
host_age
24
host_race
White
collection_device
Nasal swab
collection_method
Nasal swab
purpose_of_sequencing
baseline surveillance (random sampling)
diagnostic_gene_name_1
N
diagnostic_pcr_protocol_1
Helix COVID-19 Test
diagnostic_pcr_Ct_value_1
16.8756828308105
diagnostic_gene_name_2
ORF1ab
diagnostic_pcr_protocol_2
Helix COVID-19 Test
diagnostic_pcr_Ct_value_2
18.0392894744873
diagnostic_gene_name_3
S
diagnostic_pcr_protocol_3
Helix COVID-19 Test
diagnostic_pcr_Ct_value_3
17.7670269012451
lineage/clade name
AY.44
BioSampleModel
SARS-CoV-2: clinical or host-associated