CDC Sars CoV2 Sequencing Baseline Constellation
Isolate
SARS-CoV-2/Human/USA/PA-CDC-STM-000704461/2021
collected_by
'Helix'
collection_date
2021-06-23
isolation_source
nasal swab
geo_loc_name
USA: Pennsylvania
host
Homo sapiens
host_disease
COVID-19
host_sex
female
host_age
40
host_race
White
collection_device
Nasal swab
collection_method
Nasal swab
purpose_of_sequencing
baseline surveillance (random sampling)
diagnostic_gene_name_1
N
diagnostic_pcr_protocol_1
Helix COVID-19 Test
diagnostic_pcr_Ct_value_1
19.6791076660156
diagnostic_gene_name_2
ORF1ab
diagnostic_pcr_protocol_2
Helix COVID-19 Test
diagnostic_pcr_Ct_value_2
20.7713794708252
diagnostic_gene_name_3
S
diagnostic_pcr_protocol_3
Helix COVID-19 Test
diagnostic_pcr_Ct_value_3
20.5418663024902
lineage/clade name
B.1.526
BioSampleModel
SARS-CoV-2: clinical or host-associated