MOBYDICK_MG_MAG_121
ENA first public
2021-06-29
ENA last update
2021-06-29
External Id
SAMEA7731768
INSDC center alias
OBSERVATOIRE OCEANOLOGIQUE DE BANYULS
INSDC center name
OBSERVATOIRE OCEANOLOGIQUE DE BANYULS
INSDC first public
2021-06-29T00:19:27Z
INSDC last update
2021-06-29T00:19:27Z
INSDC status
public
Submitter Id
MOBYDICK_MG_MAG_121
assembly quality
Many fragments with little to no review of assembly other than reporting of standard assembly statistics
assembly software
MEGAHIT v1.0.4
binning parameters
CONCOCT default; MaxBIN2 -markerset 40 -prob_threshold 0.5; MetaBAT2 default; MetaWRAP -c 50 -x 83
binning software
MetaWRAP (CONCOCT, MaxBIN2, and MetaBAT2)
collection date
2018
common name
marine metagenome
completeness score
59.71
completeness software
CheckM
contamination score
0.54
environment (biome)
ocean
environment (feature)
pelagic
environment (material)
seawater
geographic location (country and/or sea)
Southern Ocean
geographic location (latitude)
50.6; 50.7; 52.6
geographic location (longitude)
72; 68.1; 67.2
investigation type
metagenome-assembled genome
isolation source
seawater
metagenomic source
marine metagenome
project name
PRJEB37465
sample derived from
ERS4652623-ERS4652625
sample name
MOBYDICK_MG_MAG_121
sequencing method
Illumina HiSeq
taxonomic identity marker
multi-marker approach