MOBYDICK_MG_MAG_27
ENA first public
2021-06-29
ENA last update
2021-06-29
External Id
SAMEA7731729
INSDC center alias
OBSERVATOIRE OCEANOLOGIQUE DE BANYULS
INSDC center name
OBSERVATOIRE OCEANOLOGIQUE DE BANYULS
INSDC first public
2021-06-29T00:19:27Z
INSDC last update
2021-06-29T00:19:27Z
INSDC status
public
Submitter Id
MOBYDICK_MG_MAG_27
assembly quality
Many fragments with little to no review of assembly other than reporting of standard assembly statistics
assembly software
MEGAHIT v1.0.4
binning parameters
CONCOCT default; MaxBIN2 -markerset 40 -prob_threshold 0.5; MetaBAT2 default; MetaWRAP -c 50 -x 44
binning software
MetaWRAP (CONCOCT, MaxBIN2, and MetaBAT2)
collection date
2018
common name
marine metagenome
completeness score
72.97
completeness software
CheckM
contamination score
0
environment (biome)
ocean
environment (feature)
pelagic
environment (material)
seawater
geographic location (country and/or sea)
Southern Ocean
geographic location (latitude)
50.6; 50.7; 52.6
geographic location (longitude)
72; 68.1; 67.2
investigation type
metagenome-assembled genome
isolation source
seawater
metagenomic source
marine metagenome
project name
PRJEB37465
sample derived from
ERS4652623-ERS4652625
sample name
MOBYDICK_MG_MAG_27
sequencing method
Illumina HiSeq
taxonomic identity marker
multi-marker approach