host
Homo sapiens
isolation_source
mucosal swab
collection_date
2018
geo_loc_name
Australia: Newcastle
lat_lon
32.9283 S 151.781 E
samp_collect_device
eSWABs (Copan, Italy)
samp_mat_process
Powerlyser 24 homogenizer followed by DNA recovery with Chemagic 360 instrument
sequence_ID
R5477
Anastomosis_site
Proximal
Gender
male
Age
85
Swab_site
Descending_colon
Surgery_site_code
CR
BMI
35
Immunosuppressed
Y
Smoker_history
Daily_smoker
Antibiotic
None
Cancer
Y
Bowel_prep_type
Fleet_enemas
IBD
None
Approach
Laparoscopic
Operation
High_anterior_resection
Chemoradiotherapy_prior
N
Leak
Y
Leak_treatment
Laparotomy_and_takedown_of_anastomosis
Anastomosis_approach
Stapled
ASA
3
BioSampleModel
Metagenome or environmental