isolation_source
marine sediment
collection_date
Not applicable
geo_loc_name
North Sea: German Bight (Helgoland Mud Area)
lat_lon
54.08972 N 7.9678 E
rel_to_oxygen
obligate anaerobe
samp_collect_device
anoxic sampling of sediment slurry incubations
samp_mat_process
Previously collected sediments from Helgoland mud area, stored at 4ºC (near in-situ temperature) until use as starting material for incubation experiments. For the incubation experiments, anaerobic slurries were prepared in ratio 1:4 and 13C-labeled substrates, sample name identifies the unique information of each sample including sediment layer, substrate and SIP fraction.
samp_size
cDNA obtained from RNA after ultracentrifugation with 300-750 ng RNA
source_material_id
Archaeal sequencing from RNA-SIP sample with a density of 1.816 g/ml in incubations amended with 13C-DIC+methane+lepidocrocite
BioSampleModel
Metagenome or environmental