RNA-Seq of CLN leaf under heat stress conditions
ENA first public
2021-06-30
ENA last update
2021-06-30
External Id
SAMEA9269214
INSDC center alias
National Institute of Plant Genome Research
INSDC center name
National Institute of Plant Genome Research
INSDC first public
2021-06-30T00:27:04Z
INSDC last update
2021-06-30T00:27:04Z
INSDC status
public
Submitter Id
SAMI00000013-RNA-Seq of CLN leaf under heat stress conditions
age
one month
broker name
Indian Biological Data Centre
common name
tomato
cultivar
CLN1621L
dev stage
one month old
environmental stress
heat stress
experimental factor 1
temperature
genotype
CLN1621L
growth condition
heat stress
organism part
leaf
phenotype
wilting
protocol
The 1-month-old CLN (tolerant) plants were acclimated to gradual increase in temperature from 26 �C to 45 �C for 4 h and then exposed to 45 �C for 4.5 h, followed by leaf tissue collection. High-quality RNA isolated from leaf was used to construct paired-end RNA-Seq libraries and sequenced on Illumina platform with three biological replicates each from control and HS conditions for CLN and CA4. High-quality 75 bp paired-end raw reads were generated.
replicate
3
sample name
SAMI00000013-RNA-Seq of CLN leaf under heat stress conditions
sampling time point
26 �C to 45 �C for 4 h and then exposed to 45 �C for 4.5 h
time
26 �C to 45 �C for 4 h and then exposed to 45 �C for 4.5 h