CB10.16C1a
ENA-FIRST-PUBLIC
2022-08-02
ENA-LAST-UPDATE
2022-08-02
External Id
SAMEA7817176
INSDC center alias
UNIVERSITY OF COPENHAGEN
INSDC center name
UNIVERSITY OF COPENHAGEN
INSDC first public
2022-08-02T16:46:29Z
INSDC last update
2022-08-02T16:46:29Z
INSDC status
public
Submitter Id
CB10_16C1a_metaG_rev
adapters
AAGTCGGAGGCCAAGCGGTCTTAGGAAGACAA;GAACGACATGGCTACGATCCGACTT
collection date
2019-06-04
geographic location (country and/or sea)
Spain
geographic location (latitude)
41.170047
geographic location (longitude)
1.168491
geographic location (region and locality)
El Morell; Tarragona
host body site
Ileum content
host breed
Ross
host common name
Chicken
host diet treatment
Control
host disease status
Campylobacter:-;Salmonella:-;Clostridium:-
host scientific name
Gallus gallus
host sex
female
host storage container temperature
21
host subject id
CB10.16
host taxid
9031
host total mass
2059.6
nucleic acid extraction
D-rex protocol
project
HoloFood
project name
HoloFood Chicken - MAG Catalogue from Ileum content
reference host genome for decontamination
GCF_000002315.6
sample name
CB10_16C1a_metaG_rev
sample storage buffer
Shield
sample storage container
E-matrix 2ml
sample storage location
UCPH
sample storage temperature
-20
sample volume or weight for DNA extraction
0.2
sequencing method
MGISEQ-2000
trial length
35
trial timepoint
35
component_organism
chicken gut metagenome
component_organism
Gallus gallus