CDC Sars CoV2 Sequencing Baseline Constellation
Isolate
SARS-CoV-2/Human/USA/TN-CDC-ASC210059244/2021
collected_by
Aegis Sciences Corporation
collection_date
2021-05-05
isolation_source
Nasal - Anterior Nares
geo_loc_name
USA: Tennessee
host
Homo sapiens
host_disease
COVID-19
host_sex
male
host_age
16
host_race
White
collection_device
Nasal - Anterior Nares
collection_method
Nasal - Anterior Nares
purpose_of_sequencing
baseline surveillance (random sampling)
diagnostic_gene_name_1
N gene
diagnostic_pcr_protocol_1
TaqPath COVID-19 Combo Kit
diagnostic_pcr_Ct_value_1
15.666607
diagnostic_gene_name_2
S gene
diagnostic_pcr_protocol_2
TaqPath COVID-19 Combo Kit
diagnostic_pcr_Ct_value_2
21.168005
diagnostic_gene_name_3
ORF1ab
diagnostic_pcr_protocol_3
TaqPath COVID-19 Combo Kit
diagnostic_pcr_Ct_value_3
15.791433
lineage/clade name
B.1.1.7
BioSampleModel
SARS-CoV-2: clinical or host-associated