CDC Sars CoV2 Sequencing Baseline Constellation
Isolate
SARS-CoV-2/Human/USA/NC-CDC-ASC210069871/2021
collected_by
Aegis Sciences Corporation
collection_date
2021-04-14
isolation_source
Nasal - Anterior Nares
geo_loc_name
USA: North Carolina
host
Homo sapiens
host_disease
COVID-19
host_sex
male
host_age
47
host_race
Unknown
collection_device
Nasal - Anterior Nares
collection_method
Nasal - Anterior Nares
purpose_of_sequencing
baseline surveillance (random sampling)
diagnostic_gene_name_1
N gene
diagnostic_pcr_protocol_1
TaqPath COVID-19 Combo Kit
diagnostic_pcr_Ct_value_1
18.15743
diagnostic_gene_name_2
S gene
diagnostic_pcr_protocol_2
TaqPath COVID-19 Combo Kit
diagnostic_pcr_Ct_value_2
19.70648
diagnostic_gene_name_3
ORF1ab
diagnostic_pcr_protocol_3
TaqPath COVID-19 Combo Kit
diagnostic_pcr_Ct_value_3
19.806253
lineage/clade name
B.1.596
BioSampleModel
SARS-CoV-2: clinical or host-associated