PB_wk92
collection_date
2022-01-25
geo_loc_name
USA: Arkansas
collection_site_id
Pine Bluff
ww_population
50000
ww_sample_duration
24
ww_sample_matrix
raw wastewater
ww_sample_type
composite
ww_surv_target_1
SARS-CoV-2
ww_surv_target_1_known_present
yes
collected_by
FDA National Center for Toxicological Research
purpose_of_ww_sampling
public health surveillance community-level
ww_flow
22712471
ww_sample_site
wastewater treatment plant
sequenced_by
FDA National Center for Toxicological Research
ww_endog_control_1
Pepper mild mottle virus (PMMoV)
ww_surv_target_1_gene
orf1ab (rep)
ww_surv_target_1_protocol
TaqMan™ 2019-nCoV Assay Kit v1 Applied Biosystems
concentration_method
peg precipitation
extraction_control
TaqMan Universal RNA Spike In/Reverse Transcription (Xeno) Control
extraction_method
ThermoFisher MagMAX™ Microbiome Ultra Nucleic Acid Isolation Kit
project_name
GenomeTrakr; LFFM ww project
ww_surv_target_1_conc
29.5625
ww_surv_target_1_conc_unit
cycles (Ct value)
Center Name
NATIONAL CENTER FOR TOXICOLOGICAL RESEARCH
ww_endog_control_1_conc
21.03352356
ww_endog_control_1_units
cycles (Ct value)
ww_surv_jurisdiction
AR
Isolation_Source
wastewater
BioSampleModel
SARS-CoV-2: wastewater surveillance