TAG_MAG_00020
This biosample is a metagenome-assembled genome obtained from the metagenomes samples: ERS4641944,ERS4641945
ENA-FIRST-PUBLIC
2022-11-14
ENA-LAST-UPDATE
2022-11-14
External Id
SAMEA111561336
INSDC center alias
IFREMER
INSDC center name
The French Research Institute for Exploitation of the Sea
INSDC first public
2022-11-14T15:53:25Z
INSDC last update
2022-11-14T15:53:25Z
INSDC status
public
Submitter Id
TAG_MAG_00020
assembly quality
Many fragments with little to no review of assembly other than reporting of standard assembly statistics.
assembly software
megahit v1.1.3
binning parameters
coverage and kmer
binning software
concoct and manual
collection_date
2014-02-04
completeness score
66.1971831
completeness software
anvi'o v5
contamination score
1.408450704
environment (biome)
marine basaltic hydrothermal vent biome
environment (feature)
marine hydrothermal vent chimney
environment (material)
microbial mat material
geographic location (country and/or sea)
Atlantic Ocean
geographic location (latitude)
26.13729
geographic location (longitude)
-44.826038
investigation type
metagenome-assembled genome
isolation_source
Gill chamber Rimicaris exoculata metagenome
metagenomic source
Gill chamber Rimicaris exoculata metagenome
project name
PRJEB37577
sample derived from
ERS4641944,ERS4641945
sample name
TAG_MAG_00020
sequencing method
NextSeq 500
taxonomic identity marker
multi-marker approach