RB_MAG_00020
This biosample is a metagenome-assembled genome obtained from the metagenomes samples: ERS4641946,ERS4641947
ENA-FIRST-PUBLIC
2022-11-14
ENA-LAST-UPDATE
2022-11-14
External Id
SAMEA111561308
INSDC center alias
IFREMER
INSDC center name
The French Research Institute for Exploitation of the Sea
INSDC first public
2022-11-14T15:53:25Z
INSDC last update
2022-11-14T15:53:25Z
INSDC status
public
Submitter Id
RB_MAG_00020
assembly quality
Many fragments with little to no review of assembly other than reporting of standard assembly statistics.
assembly software
megahit v1.1.3
binning parameters
coverage and kmer
binning software
concoct and manual
collection_date
2013-08-11
completeness score
74.64788732
completeness software
anvi'o v5
contamination score
1.408450704
environment (biome)
marine ultramafic hydrothermal vent biome
environment (feature)
marine hydrothermal vent chimney
environment (material)
microbial mat material
geographic location (country and/or sea)
Atlantic Ocean
geographic location (latitude)
36.229323
geographic location (longitude)
-33.90278
investigation type
metagenome-assembled genome
isolation_source
Gill chamber Rimicaris exoculata metagenome
metagenomic source
Gill chamber Rimicaris exoculata metagenome
project name
PRJEB37577
sample derived from
ERS4641946,ERS4641947
sample name
RB_MAG_00020
sequencing method
Illumina HiSeq 1000
taxonomic identity marker
multi-marker approach