PCR tiled amplicon WGS of SARS-Cov-2, pre-selected subset from active surveillance
ENA first public
2021-10-03
ENA last update
2021-10-03
External Id
SAMEA10256040
INSDC center alias
University of Tartu, Estonia
INSDC center name
university of tartu, estonia
INSDC first public
2021-10-03T16:21:41Z
INSDC last update
2021-10-03T16:21:41Z
INSDC status
public
SUBMISSION_TOOL
ena-upload-cli v0.3.1 @ Galaxy
SUBMISSION_TOOL_VERSION
0.3.1
Submitter Id
Cov16468
collecting institution
University of Tartu KoroGenoEST3 consortium, Estonia
collection date
2021-09-19
collector name
Aare Abroi, Radko Avi, Taavi Päll, Heiki Niglas , Merit Pauskar, Arina Shablinskaja, Eveli Kallas, Andrio Lahesaare, Kai Truusalu, Dagmar Hoidmets, Olga Sadikova, Kaspar Ratnik, Hanna Sepp, Liidia Dotsenko, Jevgenia Epštein, Heleene Suija, Katrin Kaarna, Lili Milani, Mait Metspalu, Ott Eric Oopkaup, Ivar Koppel, Erik Jaaniso, Ivan Kuzmin, Uku Raudvere, Tuuli Reisberg, Hedi Peterson, Ulvi Gerst Talas, Paul Naaber, Mari-Anne Härma, Irja Lutsar, Kristi Huik
geographic location (country and/or sea)
Estonia
geographic location (latitude)
59.333333
geographic location (longitude)
24.833333
host age
43
host common name
human
host health state
diseased
host scientific name
Homo sapiens
host sex
male
host subject id
host subject id
isolate
nan
isolation source non-host-associated
nan
sample capture status
active surveillance in response to outbreak
sample name
Cov16468