3300020477_45
MAG recovered from a sea water sample collected at the Pacific Ocean (SAMEA2622837)
ENA-FIRST-PUBLIC
2022-12-14
ENA-LAST-UPDATE
2022-12-14
External Id
SAMEA112232482
INSDC center alias
University of Alicante
INSDC center name
university of alicante
INSDC first public
2022-12-14T16:24:04Z
INSDC last update
2022-12-14T16:24:04Z
INSDC status
public
Submitter Id
3300020477_45
assembly quality
Many fragments with little to no review of assembly other than reporting of standard assembly statistics
assembly software
SPAdes
binning parameters
Tetra-nucleotide, abundance
binning software
MetaBAT
broad-scale environmental context
marine biome
collection date
2011-08-09
completeness score
70.65
completeness software
checkM
contamination score
3.3
environmental medium
saline water
geographic location (country and/or sea)
Pacific Ocean
geographic location (latitude)
-8.8999
geographic location (longitude)
-142.5461
isolation_source
sea water
local environmental context
marine epipelagic mixed layer
metagenomic source
sea water metagenome
project name
TARA
sample derived from
ERR599156
sample name
3300020477_45
taxonomic identity marker
multi-marker approach