CA233
isolate
Apis mellifera larva
collection_date
2018
env_broad_scale
Western US
env_local_scale
Digestive Tract
env_medium
larva
geo_loc_name
USA: Arizona
host
Western honey bee
isol_growth_condt
whole larvae
lat_lon
32.16 N 110.56 W
library_strategy
AMPLICON
library_source
METAGENOMIC
library_selection
RANDOM
library_layout
paired
platform
ILLUMINA
instrument_model
Illumina MiSeq
design_description
The V3–V4 region of the bacterial rRNA gene was amplified from total DNA using universal primer pair (5′-CCTACGGGDGGCWGCA-3′ and 5′-GGACTACHVGGGTMTCTAATC-3′) Sequencing was performed at the University of Arizona Genetics Core on a MiSeq following the manufacturer s guidelines.
filetype
fastq.gz
filename
CA_233_S96_L001_R1_001.fastq.gz
filename2
CA_233_S96_L001_R2_001.fastq.gz
BioSampleModel
MIMARKS.specimen
BioSampleModel
MIGS/MIMS/MIMARKS.host-associated