Oligohymenophorea sp. PL0344
Coassembly of 10 samples of Oligohymenophorea sp. PL0344 (ERS14345276,ERS14345278,ERS14345280,ERS14345285,ERS14345286,ERS14345289,ERS14345291,ERS14345292,ERS14345294,ERS14345296)
ENA-FIRST-PUBLIC
2022-12-15
ENA-LAST-UPDATE
2022-12-15
External Id
SAMEA112240355
GAL
UNIVERSITY OF OXFORD
INSDC center alias
Earlham Institute
INSDC center name
Earlham Institute
INSDC first public
2022-12-15T00:33:06Z
INSDC last update
2022-12-15T14:34:22Z
INSDC status
public
IS_GROUP_SAMPLE
Y
SEQUENCING_CENTRE
EARLHAM INSTITUTE
Submitter Id
ena-SAMPLE-TAB-14-12-2022-20:24:01:310-32317
WGA amplification approach
mda based
assembly software
SPAdes v3.15.3
broad-scale environmental context
AQUATIC ECOSYSTEM
collection_date
2021-04-06
completeness score
94.74
completeness software
BUSCO v4 Alveolata_odb10
environmental medium
WATER
geographic location (country and/or sea)
United Kingdom
geographic location (latitude)
51.764065
geographic location (longitude)
-1.2512505
isolation_source
water
local environmental context
POND WATER
metagenomic source
pond metagenome
project name
Oligohymenophorea PL0344
sample derived from
ERS14345276,ERS14345278,ERS14345280,ERS14345285,ERS14345286,ERS14345289,ERS14345291,ERS14345292,ERS14345294,ERS14345296
sample name
ena-SAMPLE-TAB-14-12-2022-20:24:01:310-32317
single cell or viral particle lysis approach
chemical
sorting technology
flow cytometric cell sorting
taxonomic identity marker
18S gene