11149.dhmc.2.10; hyperbaric oxygen pilot
hyperbaric oxygen intervention for ulcerative colitis
ENA first public
2022-01-19
ENA last update
2022-01-19
External Id
SAMEA12363573
INSDC center alias
UCSDMI
INSDC center name
University of California San Diego Microbiome Initiative
INSDC first public
2022-01-19T04:26:53Z
INSDC last update
2022-01-19T04:26:53Z
INSDC status
public
Submitter Id
qiita_sid_11149:11149.dhmc.2.10
albumin
not provided
albumin_units
g/dL
aliquot_for_culturing
FALSE
aliquot_for_mgx
FALSE
aliquot_for_mpx
FALSE
anonymized name
DHMC-002.unknown
anti_tnf
not provided
clinical_remission_d10
not provided
clinical_remission_d3
not provided
clinical_remission_d5
not provided
collection_timestamp
2017
colomectomy
not provided
crp_change_d3
not provided
crp_change_d3_units
mg/dL
crp_change_d5
not provided
crp_change_d5_units
mg/dL
crp_d0
not provided
crp_d0_units
mg/dL
crp_d10
not provided
crp_d10_units
mg/dL
crp_d3
not provided
crp_d3_units
not provided
crp_d5
not provided
crp_d5_units
not provided
current_partial_mayo
not provided
current_rbs
not provided
current_sfs
not provided
d1nlr
2.252
day
not provided
day0mes
2
day0partial_mayo
4
day0partialmayo
4
day0rbs
1
day0sfs
3
day10mes
3
day10partialmayo
4
day10partialmayoreduction
0
day10rbs
1
day10sfs
3
day3partialmayo
4
day3partialmayoreduction
0
day3rbs
1
day3sfs
3
day5partialmayo
4
day5partialmayoreduction
0
day5rbs
1
day5sfs
3
days_since_start
not provided
disease
ulcerative colitis
dna_extracted
TRUE
elevation
193
empo_1
Host-associated
empo_2
Animal
empo_3
Animal distal gut
endoscopic_remission_d10
not provided
endoscopy_d0
not provided
endoscopy_d10
not provided
env biome
urban biome
env feature
human-associated habitat
env package
human-gut
env_material
feces
ers_change_d5
not provided
ers_change_d5_units
mm/hr
ers_d0
not provided
ers_d0_units
mm/hr
ers_d10
not provided
ers_d10_units
mm/hr
ers_d5
not provided
ers_d5_units
mm/hr
found_in_shipment
not collected
geo loc name
USA:CA,San Diego
hbot_session_numbers
7
hemoglobin_units
g/dL
host age
55
host body habitat
UBERON:feces
host body product
UBERON:feces
host body site
UBERON:feces
host common name
human
host life stage
adult
host scientific name
Homo sapiens
host subject id
DHMC-002
host taxid
9606
host_age_units
years
immunomodulatory
not provided
in_hospital_progression_to_2nd_line_therapy
TRUE
latitude
32.842
longitude
-117.258
mucosal_healing_d10
not provided
nlr4_4
FALSE
physical_specimen_location
UCSDMI
physical_specimen_remaining
FALSE
platelet_counts_1000
not provided
presence_of_blood
not collected
prior_anti_tnf
TRUE
prior_tofacitinib
FALSE
prior_vedo
FALSE
response_d3
not provided
response_d5
not provided
response_daytruefalse
not provided
sample label
not collected
sample name
qiita_sid_11149:11149.dhmc.2.10
sample type
feces
sex
not provided
steroid_dependent
TRUE
timepoint
not provided
treatment group
sham
trial_arm
not provided
weight_for_mbx_mg
not collected