hyperbaric oxygen pilot; 11149.dhmc.1.10
hyperbaric oxygen intervention for ulcerative colitis
ENA first public
2022-01-19
ENA last update
2022-01-19
External Id
SAMEA12363502
INSDC center alias
UCSDMI
INSDC center name
University of California San Diego Microbiome Initiative
INSDC first public
2022-01-19T04:26:53Z
INSDC last update
2022-01-19T04:26:53Z
INSDC status
public
Submitter Id
qiita_sid_11149:11149.dhmc.1.10
albumin
2.7
albumin_units
g/dL
aliquot_for_culturing
FALSE
aliquot_for_mgx
FALSE
aliquot_for_mpx
FALSE
anonymized name
DHMC-001.10
anti_tnf
FALSE
clinical_remission_d10
FALSE
clinical_remission_d3
FALSE
clinical_remission_d5
TRUE
collection_timestamp
2017
colomectomy
FALSE
crp_change_d3
119
crp_change_d3_units
mg/dL
crp_change_d5
119
crp_change_d5_units
mg/dL
crp_d0
148
crp_d0_units
mg/dL
crp_d10
23
crp_d10_units
mg/dL
crp_d3
29
crp_d3_units
mg/dL
crp_d5
29
crp_d5_units
mg/dL
current_partial_mayo
0
current_rbs
0
current_sfs
0
d1nlr
5.33
day
10
day0mes
3
day0partial_mayo
6
day0partialmayo
6
day0rbs
3
day0sfs
3
day10mes
2
day10partialmayo
0
day10partialmayoreduction
6
day10rbs
0
day10sfs
0
day3partialmayo
2
day3partialmayoreduction
4
day3rbs
1
day3sfs
1
day5partialmayo
1
day5partialmayoreduction
5
day5rbs
0
day5sfs
1
days_since_start
10
disease
ulcerative colitis
dna_extracted
TRUE
elevation
193
empo_1
Host-associated
empo_2
Animal
empo_3
Animal distal gut
endoscopic_remission_d10
FALSE
endoscopy_d0
3
endoscopy_d10
2
env biome
urban biome
env feature
human-associated habitat
env package
human-gut
env_material
feces
ers_change_d5
18
ers_change_d5_units
mm/hr
ers_d0
90
ers_d0_units
mm/hr
ers_d10
71
ers_d10_units
mm/hr
ers_d5
72
ers_d5_units
mm/hr
found_in_shipment
not collected
geo loc name
USA:CA,San Diego
hbot_session_numbers
10
hemoglobin
11.4
hemoglobin_units
g/dL
host age
51
host body habitat
UBERON:feces
host body product
UBERON:feces
host body site
UBERON:feces
host common name
human
host life stage
adult
host scientific name
Homo sapiens
host subject id
DHMC-001
host taxid
9606
host_age_units
years
immunomodulatory
FALSE
in_hospital_progression_to_2nd_line_therapy
FALSE
latitude
32.842
longitude
-117.258
mucosal_healing_d10
FALSE
nlr4_4
TRUE
physical_specimen_location
UCSDMI
physical_specimen_remaining
TRUE
platelet_counts_1000
629
presence_of_blood
not collected
prior_anti_tnf
FALSE
prior_tofacitinib
FALSE
prior_vedo
FALSE
response_d3
TRUE
response_d5
TRUE
response_daytruefalse
TRUE
sample label
not collected
sample name
qiita_sid_11149:11149.dhmc.1.10
sample type
feces
second_line_therapy
FALSE
sex
female
steroid_dependent
TRUE
timepoint
10
treatment group
treatment
trial_arm
treatment
weight_for_mbx_mg
not collected