hyperbaric oxygen pilot; 11149.mayo.2
hyperbaric oxygen intervention for ulcerative colitis
ENA first public
2022-01-19
ENA last update
2022-01-19
External Id
SAMEA12363576
INSDC center alias
UCSDMI
INSDC center name
University of California San Diego Microbiome Initiative
INSDC first public
2022-01-19T04:26:53Z
INSDC last update
2022-01-19T04:26:53Z
INSDC status
public
Submitter Id
qiita_sid_11149:11149.mayo.2
albumin
not provided
albumin_units
g/dL
aliquot_for_culturing
FALSE
aliquot_for_mgx
FALSE
aliquot_for_mpx
FALSE
anonymized name
Mayo2.unknown
anti_tnf
not provided
clinical_remission_d10
not provided
clinical_remission_d3
not provided
clinical_remission_d5
not provided
collection_timestamp
2017
colomectomy
not provided
crp_change_d3
not provided
crp_change_d3_units
mg/dL
crp_change_d5
not provided
crp_change_d5_units
mg/dL
crp_d0
not provided
crp_d0_units
mg/dL
crp_d10
not provided
crp_d10_units
mg/dL
crp_d3
not provided
crp_d3_units
not provided
crp_d5
not provided
crp_d5_units
not provided
current_partial_mayo
not provided
current_rbs
not provided
current_sfs
not provided
d1nlr
3
day
not provided
day0mes
3
day0partial_mayo
6
day0partialmayo
6
day0rbs
3
day0sfs
3
day10mes
3
day10partialmayo
6
day10partialmayoreduction
0
day10rbs
3
day10sfs
3
day3partialmayo
6
day3partialmayoreduction
0
day3rbs
3
day3sfs
3
day5partialmayo
6
day5partialmayoreduction
0
day5rbs
3
day5sfs
3
days_since_start
not provided
disease
ulcerative colitis
dna_extracted
TRUE
elevation
193
empo_1
Host-associated
empo_2
Animal
empo_3
Animal distal gut
endoscopic_remission_d10
not provided
endoscopy_d0
not provided
endoscopy_d10
not provided
env biome
urban biome
env feature
human-associated habitat
env package
human-gut
env_material
feces
ers_change_d5
not provided
ers_change_d5_units
mm/hr
ers_d0
not provided
ers_d0_units
mm/hr
ers_d10
not provided
ers_d10_units
mm/hr
ers_d5
not provided
ers_d5_units
mm/hr
found_in_shipment
not collected
geo loc name
USA:CA,San Diego
hbot_session_numbers
3
hemoglobin_units
g/dL
host age
20
host body habitat
UBERON:feces
host body product
UBERON:feces
host body site
UBERON:feces
host common name
human
host life stage
adult
host scientific name
Homo sapiens
host subject id
Mayo2
host taxid
9606
host_age_units
years
immunomodulatory
not provided
in_hospital_progression_to_2nd_line_therapy
TRUE
latitude
32.842
longitude
-117.258
mucosal_healing_d10
not provided
nlr4_4
FALSE
physical_specimen_location
UCSDMI
physical_specimen_remaining
FALSE
platelet_counts_1000
not provided
presence_of_blood
not collected
prior_anti_tnf
TRUE
prior_tofacitinib
FALSE
prior_vedo
FALSE
response_d3
not provided
response_d5
not provided
response_daytruefalse
not provided
sample label
not collected
sample name
qiita_sid_11149:11149.mayo.2
sample type
feces
sex
not provided
steroid_dependent
TRUE
timepoint
not provided
treatment group
sham
trial_arm
not provided
weight_for_mbx_mg
not collected