ENA first public
2021-09-06
ENA last update
2021-09-06
External Id
SAMEA9568279
INSDC center alias
MAX PLANCK INSTITUTE FOR PLANT BREEDING RESEARCH
INSDC center name
MAX PLANCK INSTITUTE FOR PLANT BREEDING RESEARCH
INSDC first public
2021-09-06T16:12:22Z
INSDC last update
2021-09-06T16:12:22Z
INSDC status
public
Submitter Id
go_006_NC_ITS2_22
collection date
2017
common name
rhizosphere metagenome
environment (biome)
laboratory facility
environment (feature)
plant growth chamber
environment (material)
rhizosphere
experimental factor
inoculated with powdery mildew (Golovinomyces orontii)
geographic location (latitude)
not provided
geographic location (longitude)
not provided
host common name
thale cress
host disease status
inoculated with powdery mildew (Golovinomyces orontii)
host genotype
col-0
host taxid
3702
investigation type
metagenome
pcr primers
fITS7-ITS4
plant body site
rhizosphere
plant-associated environmental package
plant-associated
project name
Impact of G.orontii infection in A.thaliana-associated microbiota
sample name
go_006_NC_ITS2_22
sequencing method
Illumina MiSeq
soil
CAS12
target gene
ITS2
target subfragment
ITS2