fermentation metagenome
collection_date
2021-04
env_broad_scale
ENVO:00002264
env_local_scale
ENVO:00002003
env_medium
ENVO:00002003
geo_loc_name
Switzerland: Zuerich
host
Homo sapiens
lat_lon
47.36 N 8.55 E
sequencing_depth
47810608
experiment
human1
Sample_description
TR1-36
Reactor
TR1
Treatment
VAN+CCUG59168
Day_of_Connection
36
Day_of_Treatment
7
Day_from_Inoculum
51
Phase
Treat
Treatment2
AB+E. faecium
Date
NA
Reactor_Treatment
TR1_VAN+CCUG59168
Reactor_F1_F2
VAN_CCUG59168_1_90
Model
Human
Model2
Human1
GeneCopyNumberperML
49200000000
HV292.1_Copy_Number_permL
NA
CCUG59168_Copy_Number_permL
5165000000
CTX_Copy_Number_permL
NA
VAN_Copy_Number_permL
1300000000000
Antibiotic_mg.L
90
Antibiotic
VAN
Lactose_mM
0.777
Glucose_mM
0.244
Galactose_mM
1.325
Succinat_mM
1.417
Lactat_mM
5.496
Formiat_mM
8.836
Acetat_mM
18.665
Propionat_mM
41.793
Isobutyrat_mM
4.202
Butyrat_mM
13.49
Isovalerat_mM
6.903
Valerat_mM
1.239
Total_SCFA_mM
104.387
BioSampleModel
MIMS.me
BioSampleModel
MIGS/MIMS/MIMARKS.host-associated