fermentation metagenome
collection_date
2021-04
env_broad_scale
ENVO:00002264
env_local_scale
ENVO:00002003
env_medium
ENVO:00002003
geo_loc_name
Switzerland: Zuerich
host
Homo sapiens
lat_lon
47.36 N 8.55 E
sequencing_depth
54217324
experiment
human1
Sample_description
TR1-65
Reactor
TR1
Treatment
CTX+HV292.1
Day_of_Connection
12
Day_of_Treatment
3
Day_from_Inoculum
80
Phase
Treat
Treatment2
AB+E. coli
Date
NA
Reactor_Treatment
TR1_CTX+HV292.1
Reactor_F1_F2
CTX_HV292_1_20
Model
Human
Model2
Human1
GeneCopyNumberperML
136000000000
HV292.1_Copy_Number_permL
0
CCUG59168_Copy_Number_permL
NA
CTX_Copy_Number_permL
2160000
VAN_Copy_Number_permL
NA
Antibiotic_mg.L
20
Antibiotic
CTX
Lactose_mM
0
Glucose_mM
0
Galactose_mM
0.367
Succinat_mM
1.37
Lactat_mM
1.552
Formiat_mM
3.816
Acetat_mM
70.605
Propionat_mM
26.932
Isobutyrat_mM
4.857
Butyrat_mM
39.501
Isovalerat_mM
4.427
Valerat_mM
5.098
Total_SCFA_mM
158.525
BioSampleModel
MIMS.me
BioSampleModel
MIGS/MIMS/MIMARKS.host-associated