fermentation metagenome
collection_date
2021-04
env_broad_scale
ENVO:00002264
env_local_scale
ENVO:00002003
env_medium
ENVO:00002003
geo_loc_name
Switzerland: Zuerich
host
Homo sapiens
lat_lon
47.36 N 8.55 E
sequencing_depth
39756964
experiment
human1
Sample_description
TR5-30
Reactor
TR5
Treatment
CCUG59168
Day_of_Connection
30
Day_of_Treatment
1
Day_from_Inoculum
45
Phase
Treat
Treatment2
E. faecium
Date
NA
Reactor_Treatment
TR5_CCUG59168
Reactor_F1_F2
CCUG59168_1
Model
Human
Model2
Human1
GeneCopyNumberperML
277000000000
HV292.1_Copy_Number_permL
NA
CCUG59168_Copy_Number_permL
15700000
CTX_Copy_Number_permL
NA
VAN_Copy_Number_permL
6125000000
Antibiotic_mg.L
NA
Antibiotic
NA
Lactose_mM
0
Glucose_mM
0
Galactose_mM
0
Succinat_mM
1.239
Lactat_mM
1.215
Formiat_mM
5.294
Acetat_mM
78.115
Propionat_mM
17.219
Isobutyrat_mM
4.725
Butyrat_mM
46.529
Isovalerat_mM
4.203
Valerat_mM
1.259
Total_SCFA_mM
159.798
BioSampleModel
MIMS.me
BioSampleModel
MIGS/MIMS/MIMARKS.host-associated