fermentation metagenome
collection_date
2022-03
env_broad_scale
ENVO:00002264
env_local_scale
ENVO:00002003
env_medium
ENVO:00002003
geo_loc_name
Switzerland: Zuerich
host
Homo sapiens
lat_lon
47.36 N 8.55 E
sequencing_depth
48360136
experiment
human2
Sample_description
TR5-10
Reactor
TR5
Treatment
CTX+HV292.1
Day_of_Connection
10
Day_of_Treatment
-1
Day_from_Inoculum
50
Phase
Stab
Treatment2
AB+E. coli
Date
NA
Reactor_Treatment
TR5_CTX+HV292.1
Reactor_F1_F2
CTX_HV292_2_200
Model
Human
Model2
Human2
GeneCopyNumberperML
165000000000
HV292.1_Copy_Number_permL
NA
CCUG59168_Copy_Number_permL
NA
CTX_Copy_Number_permL
NA
VAN_Copy_Number_permL
NA
Antibiotic_mg.L
200
Antibiotic
CTX
Lactose_mM
0.248
Glucose_mM
0
Galactose_mM
0
Succinat_mM
0.298
Lactat_mM
0
Formiat_mM
3.954
Acetat_mM
78.929
Propionat_mM
24.346
Isobutyrat_mM
9.007
Butyrat_mM
31.397
Isovalerat_mM
4.837
Valerat_mM
4.044
Total_SCFA_mM
157.06
BioSampleModel
MIMS.me
BioSampleModel
MIGS/MIMS/MIMARKS.host-associated