fermentation metagenome
collection_date
2021-04
env_broad_scale
ENVO:00002264
env_local_scale
ENVO:00002003
env_medium
ENVO:00002003
geo_loc_name
Switzerland: Zuerich
host
Homo sapiens
lat_lon
47.36 N 8.55 E
sequencing_depth
48408436
experiment
human1
Sample_description
TR5-36
Reactor
TR5
Treatment
CCUG59168
Day_of_Connection
36
Day_of_Treatment
7
Day_from_Inoculum
51
Phase
Treat
Treatment2
E. faecium
Date
NA
Reactor_Treatment
TR5_CCUG59168
Reactor_F1_F2
CCUG59168_1
Model
Human
Model2
Human1
GeneCopyNumberperML
168000000000
HV292.1_Copy_Number_permL
NA
CCUG59168_Copy_Number_permL
129000
CTX_Copy_Number_permL
NA
VAN_Copy_Number_permL
0
Antibiotic_mg.L
NA
Antibiotic
NA
Lactose_mM
0
Glucose_mM
0
Galactose_mM
0.266
Succinat_mM
1.208
Lactat_mM
1.372
Formiat_mM
6.666
Acetat_mM
72.238
Propionat_mM
14.474
Isobutyrat_mM
4.565
Butyrat_mM
48.449
Isovalerat_mM
3.707
Valerat_mM
1.426
Total_SCFA_mM
154.371
BioSampleModel
MIMS.me
BioSampleModel
MIGS/MIMS/MIMARKS.host-associated