fermentation metagenome
collection_date
2021-04
env_broad_scale
ENVO:00002264
env_local_scale
ENVO:00002003
env_medium
ENVO:00002003
geo_loc_name
Switzerland: Zuerich
host
Homo sapiens
lat_lon
47.36 N 8.55 E
sequencing_depth
49055146
experiment
human1
Sample_description
TR3-69
Reactor
TR3
Treatment
CTX+HV292.1
Day_of_Connection
16
Day_of_Treatment
7
Day_from_Inoculum
84
Phase
Treat
Treatment2
AB+E. coli
Date
NA
Reactor_Treatment
TR3_CTX+HV292.1
Reactor_F1_F2
CTX_HV292_1_200
Model
Human
Model2
Human1
GeneCopyNumberperML
241000000000
HV292.1_Copy_Number_permL
0
CCUG59168_Copy_Number_permL
NA
CTX_Copy_Number_permL
1117500
VAN_Copy_Number_permL
NA
Antibiotic_mg.L
200
Antibiotic
CTX
Lactose_mM
0
Glucose_mM
0
Galactose_mM
0
Succinat_mM
1.739
Lactat_mM
1.127
Formiat_mM
5.85
Acetat_mM
66.606
Propionat_mM
24.514
Isobutyrat_mM
5.216
Butyrat_mM
48.333
Isovalerat_mM
4.836
Valerat_mM
6.599
Total_SCFA_mM
164.82
BioSampleModel
MIMS.me
BioSampleModel
MIGS/MIMS/MIMARKS.host-associated