fermentation metagenome
collection_date
2021-04
env_broad_scale
ENVO:00002264
env_local_scale
ENVO:00002003
env_medium
ENVO:00002003
geo_loc_name
Switzerland: Zuerich
host
Homo sapiens
lat_lon
47.36 N 8.55 E
sequencing_depth
42894482
experiment
human1
Sample_description
TR3-32
Reactor
TR3
Treatment
VAN+CCUG59168
Day_of_Connection
32
Day_of_Treatment
3
Day_from_Inoculum
47
Phase
Treat
Treatment2
AB+E. faecium
Date
NA
Reactor_Treatment
TR3_VAN+CCUG59168
Reactor_F1_F2
VAN_CCUG59168_1_600
Model
Human
Model2
Human1
GeneCopyNumberperML
200000000000
HV292.1_Copy_Number_permL
NA
CCUG59168_Copy_Number_permL
2690000000
CTX_Copy_Number_permL
NA
VAN_Copy_Number_permL
1190000000000
Antibiotic_mg.L
600
Antibiotic
VAN
Lactose_mM
0.904
Glucose_mM
0
Galactose_mM
2.563
Succinat_mM
1.559
Lactat_mM
15.308
Formiat_mM
8.918
Acetat_mM
11.689
Propionat_mM
13.911
Isobutyrat_mM
3.508
Butyrat_mM
7.647
Isovalerat_mM
5.601
Valerat_mM
1.023
Total_SCFA_mM
72.631
BioSampleModel
MIMS.me
BioSampleModel
MIGS/MIMS/MIMARKS.host-associated