fermentation metagenome
collection_date
2020-08
env_broad_scale
ENVO:00002264
env_local_scale
ENVO:00002003
env_medium
ENVO:00002003
geo_loc_name
Switzerland: Zuerich
host
Gallus gallus domesticus
lat_lon
47.36 N 8.55 E
sequencing_depth
68185384
experiment
chicken1
Sample_description
D-0
Reactor
DONOR
Treatment
DONOR
Day_of_Connection
NA
Day_of_Treatment
NA
Day_from_Inoculum
NA
Phase
DONOR
Treatment2
DONOR
Date
NA
Reactor_Treatment
DONOR
Reactor_F1_F2
DONOR_1
Model
Chicken
Model2
Chicken1
GeneCopyNumberperML
14400000000
HV292.1_Copy_Number_permL
NA
CCUG59168_Copy_Number_permL
NA
CTX_Copy_Number_permL
NA
VAN_Copy_Number_permL
NA
Antibiotic_mg.L
NA
Antibiotic
NA
Lactose_mM
NA
Glucose_mM
NA
Galactose_mM
NA
Succinat_mM
NA
Lactat_mM
NA
Formiat_mM
NA
Acetat_mM
NA
Propionat_mM
NA
Isobutyrat_mM
NA
Butyrat_mM
NA
Isovalerat_mM
NA
Valerat_mM
NA
Total_SCFA_mM
NA
BioSampleModel
MIMS.me
BioSampleModel
MIGS/MIMS/MIMARKS.host-associated