fermentation metagenome
collection_date
2021-04
env_broad_scale
ENVO:00002264
env_local_scale
ENVO:00002003
env_medium
ENVO:00002003
geo_loc_name
Switzerland: Zuerich
host
Homo sapiens
lat_lon
47.36 N 8.55 E
sequencing_depth
48066224
experiment
human1
Sample_description
TR5-63
Reactor
TR5
Treatment
HV292.1
Day_of_Connection
10
Day_of_Treatment
1
Day_from_Inoculum
78
Phase
Treat
Treatment2
E. coli
Date
NA
Reactor_Treatment
TR5_HV292.1
Reactor_F1_F2
HV292_1
Model
Human
Model2
Human1
GeneCopyNumberperML
452000000000
HV292.1_Copy_Number_permL
20600000
CCUG59168_Copy_Number_permL
NA
CTX_Copy_Number_permL
41600000
VAN_Copy_Number_permL
NA
Antibiotic_mg.L
NA
Antibiotic
NA
Lactose_mM
0
Glucose_mM
0
Galactose_mM
0.68
Succinat_mM
1.435
Lactat_mM
1.293
Formiat_mM
6.33
Acetat_mM
70.102
Propionat_mM
38.008
Isobutyrat_mM
3.627
Butyrat_mM
35.459
Isovalerat_mM
3.258
Valerat_mM
1.282
Total_SCFA_mM
161.474
BioSampleModel
MIMS.me
BioSampleModel
MIGS/MIMS/MIMARKS.host-associated