fermentation metagenome
collection_date
2021-04
env_broad_scale
ENVO:00002264
env_local_scale
ENVO:00002003
env_medium
ENVO:00002003
geo_loc_name
Switzerland: Zuerich
host
Homo sapiens
lat_lon
47.36 N 8.55 E
sequencing_depth
40539894
experiment
human1
Sample_description
TR2-69
Reactor
TR2
Treatment
CTX
Day_of_Connection
16
Day_of_Treatment
7
Day_from_Inoculum
84
Phase
Treat
Treatment2
AB
Date
NA
Reactor_Treatment
TR_2CTX
Reactor_F1_F2
CTX_1_20
Model
Human
Model2
Human1
GeneCopyNumberperML
102000000000
HV292.1_Copy_Number_permL
0
CCUG59168_Copy_Number_permL
NA
CTX_Copy_Number_permL
0
VAN_Copy_Number_permL
NA
Antibiotic_mg.L
20
Antibiotic
CTX
Lactose_mM
0
Glucose_mM
0
Galactose_mM
0.759
Succinat_mM
1.121
Lactat_mM
2.45
Formiat_mM
0
Acetat_mM
59.247
Propionat_mM
25.199
Isobutyrat_mM
5.255
Butyrat_mM
49.825
Isovalerat_mM
6.343
Valerat_mM
4.494
Total_SCFA_mM
154.693
BioSampleModel
MIMS.me
BioSampleModel
MIGS/MIMS/MIMARKS.host-associated