fermentation metagenome
collection_date
2021-04
env_broad_scale
ENVO:00002264
env_local_scale
ENVO:00002003
env_medium
ENVO:00002003
geo_loc_name
Switzerland: Zuerich
host
Homo sapiens
lat_lon
47.36 N 8.55 E
sequencing_depth
47347138
experiment
human1
Sample_description
TR5-28
Reactor
TR5
Treatment
CCUG59168
Day_of_Connection
28
Day_of_Treatment
-1
Day_from_Inoculum
43
Phase
Stab
Treatment2
E. faecium
Date
NA
Reactor_Treatment
TR5_CCUG59168
Reactor_F1_F2
CCUG59168_1
Model
Human
Model2
Human1
GeneCopyNumberperML
192000000000
HV292.1_Copy_Number_permL
NA
CCUG59168_Copy_Number_permL
NA
CTX_Copy_Number_permL
NA
VAN_Copy_Number_permL
NA
Antibiotic_mg.L
NA
Antibiotic
NA
Lactose_mM
0.037
Glucose_mM
0.284
Galactose_mM
0
Succinat_mM
1.135
Lactat_mM
0.364
Formiat_mM
3.277
Acetat_mM
76.749
Propionat_mM
19.707
Isobutyrat_mM
4.269
Butyrat_mM
42.214
Isovalerat_mM
4.334
Valerat_mM
0.284
Total_SCFA_mM
152.654
BioSampleModel
MIMS.me
BioSampleModel
MIGS/MIMS/MIMARKS.host-associated