fermentation metagenome
collection_date
2021-04
env_broad_scale
ENVO:00002264
env_local_scale
ENVO:00002003
env_medium
ENVO:00002003
geo_loc_name
Switzerland: Zuerich
host
Homo sapiens
lat_lon
47.36 N 8.55 E
sequencing_depth
40800448
experiment
human1
Sample_description
TR3-63
Reactor
TR3
Treatment
CTX+HV292.1
Day_of_Connection
10
Day_of_Treatment
1
Day_from_Inoculum
78
Phase
Treat
Treatment2
AB+E. coli
Date
NA
Reactor_Treatment
TR3_CTX+HV292.1
Reactor_F1_F2
CTX_HV292_1_200
Model
Human
Model2
Human1
GeneCopyNumberperML
383000000000
HV292.1_Copy_Number_permL
30487500
CCUG59168_Copy_Number_permL
NA
CTX_Copy_Number_permL
53737500
VAN_Copy_Number_permL
NA
Antibiotic_mg.L
200
Antibiotic
CTX
Lactose_mM
0
Glucose_mM
0.305
Galactose_mM
0.989
Succinat_mM
1.2
Lactat_mM
3.095
Formiat_mM
6.354
Acetat_mM
69.382
Propionat_mM
34.611
Isobutyrat_mM
3.285
Butyrat_mM
36.085
Isovalerat_mM
3.394
Valerat_mM
1.704
Total_SCFA_mM
160.404
BioSampleModel
MIMS.me
BioSampleModel
MIGS/MIMS/MIMARKS.host-associated