fermentation metagenome
collection_date
2021-04
env_broad_scale
ENVO:00002264
env_local_scale
ENVO:00002003
env_medium
ENVO:00002003
geo_loc_name
Switzerland: Zuerich
host
Homo sapiens
lat_lon
47.36 N 8.55 E
sequencing_depth
48528692
experiment
human1
Sample_description
TR1-32
Reactor
TR1
Treatment
VAN+CCUG59168
Day_of_Connection
32
Day_of_Treatment
3
Day_from_Inoculum
47
Phase
Treat
Treatment2
AB+E. faecium
Date
NA
Reactor_Treatment
TR1_VAN+CCUG59168
Reactor_F1_F2
VAN_CCUG59168_1_90
Model
Human
Model2
Human1
GeneCopyNumberperML
194000000000
HV292.1_Copy_Number_permL
NA
CCUG59168_Copy_Number_permL
8450000000
CTX_Copy_Number_permL
NA
VAN_Copy_Number_permL
8400000000000
Antibiotic_mg.L
90
Antibiotic
VAN
Lactose_mM
1.58
Glucose_mM
0.767
Galactose_mM
2.044
Succinat_mM
1.473
Lactat_mM
9.844
Formiat_mM
13.503
Acetat_mM
11.513
Propionat_mM
7.533
Isobutyrat_mM
3.121
Butyrat_mM
9.105
Isovalerat_mM
5.593
Valerat_mM
1.046
Total_SCFA_mM
67.122
BioSampleModel
MIMS.me
BioSampleModel
MIGS/MIMS/MIMARKS.host-associated