fermentation metagenome
collection_date
2021-04
env_broad_scale
ENVO:00002264
env_local_scale
ENVO:00002003
env_medium
ENVO:00002003
geo_loc_name
Switzerland: Zuerich
host
Homo sapiens
lat_lon
47.36 N 8.55 E
sequencing_depth
49676768
experiment
human1
Sample_description
TR3-36
Reactor
TR3
Treatment
VAN+CCUG59168
Day_of_Connection
36
Day_of_Treatment
7
Day_from_Inoculum
51
Phase
Treat
Treatment2
AB+E. faecium
Date
NA
Reactor_Treatment
TR3_VAN+CCUG59168
Reactor_F1_F2
VAN_CCUG59168_1_600
Model
Human
Model2
Human1
GeneCopyNumberperML
291000000000
HV292.1_Copy_Number_permL
NA
CCUG59168_Copy_Number_permL
1670000000
CTX_Copy_Number_permL
NA
VAN_Copy_Number_permL
480000000000
Antibiotic_mg.L
600
Antibiotic
VAN
Lactose_mM
1.22
Glucose_mM
0
Galactose_mM
0.784
Succinat_mM
1.435
Lactat_mM
13.537
Formiat_mM
10.322
Acetat_mM
10.928
Propionat_mM
11.06
Isobutyrat_mM
2.549
Butyrat_mM
5.173
Isovalerat_mM
3.751
Valerat_mM
0.973
Total_SCFA_mM
61.732
BioSampleModel
MIMS.me
BioSampleModel
MIGS/MIMS/MIMARKS.host-associated