Rattus norvegicus
source_name
hippocampus
tissue
hippocampus
hippocampal siide used
left
Sex
male
animal strain
F2 cross of bred Low Responders and bred High Responders
generation
F2 cross
rat number
687
family
9
hpc dissection_date
12/10/2020
hpc dissection_day
10
dissector
Two
rnaconc
56.8854
pf reads
151960685
ribosomeperc
0.0177
mrnaperc
0.8273
rin
9.3
dv200
96.4
percent coding
0-Jan-00
percent utr
0.360529
percent intronic
0.03677
percent intergenic
1/0/1900
pct usable_bases
1/0/1900
median cv_coverage
0.440475
lateral locoscore
141
rearing locoscore
266
total locoscore
407
epm percent_time_open_arm
8.32
epm boli
0
epm distancetraveled
1317.19
epm time_immobile
121.52
learningclassification
GT
pca index_days6and_7
-0.87775
response bias_day7
-1
prob diff_day7
-0.92
latency score_day7
-0.7365
pca index_day7only
-0.8855
response bias_day6
-1
prob diff_day6
-0.88
latency score_day6
-0.73
pca index_day6only
-0.87
epm rawdatafile
1
epm trial
15
epm testdate
10/18/2013
epm testday
1
epm testorderbyday
15
loco testdate
9/24/2013
loco testday
1
loco batch
1
loco rack
2
loco box
16
dob
8/8/2013
dod
12/9/2013
failed qc
very high library size/PF read
geo_loc_name
missing
collection_date
missing