fermentation metagenome
collection_date
2021-04
env_broad_scale
ENVO:00002264
env_local_scale
ENVO:00002003
env_medium
ENVO:00002003
geo_loc_name
Switzerland: Zuerich
host
Homo sapiens
lat_lon
47.36 N 8.55 E
sequencing_depth
56932850
experiment
human1
Sample_description
TR4-65
Reactor
TR4
Treatment
CTX
Day_of_Connection
12
Day_of_Treatment
3
Day_from_Inoculum
80
Phase
Treat
Treatment2
AB
Date
NA
Reactor_Treatment
TR4_CTX
Reactor_F1_F2
CTX_1_200
Model
Human
Model2
Human1
GeneCopyNumberperML
239000000000
HV292.1_Copy_Number_permL
0
CCUG59168_Copy_Number_permL
NA
CTX_Copy_Number_permL
0
VAN_Copy_Number_permL
NA
Antibiotic_mg.L
200
Antibiotic
CTX
Lactose_mM
0
Glucose_mM
0
Galactose_mM
0.397
Succinat_mM
1.051
Lactat_mM
2.611
Formiat_mM
0
Acetat_mM
64.822
Propionat_mM
36.192
Isobutyrat_mM
3.756
Butyrat_mM
38.253
Isovalerat_mM
5.307
Valerat_mM
1.038
Total_SCFA_mM
153.427
BioSampleModel
MIMS.me
BioSampleModel
MIGS/MIMS/MIMARKS.host-associated