Metagenome-assembled genome: SRR1506988_bin.95_CONCOCT_v1.1_MAG
uncultured Anaerolineales bacterium
This sample represents a Third Party Annotation (TPA) Metagenome-Assembled Genome (MAG) assembled from the metagenomic run SRR1506988 of study SRP044055.
ENA-FIRST-PUBLIC
2023-01-03
ENA-LAST-UPDATE
2023-01-03
External Id
SAMEA14081733
INSDC center alias
EBI
INSDC center name
European Bioinformatics Institute
INSDC first public
2023-01-03T00:32:41Z
INSDC last update
2023-01-03T00:32:41Z
INSDC status
public
Submitter Id
SRR1506988_bin.95_CONCOCT_v1.1_MAG
assembly quality
Many fragments with little to no review of assembly other than reporting of standard assembly statistics
assembly software
metaspadesv3.12.0
binning parameters
Default
binning software
CONCOCT v1.1
broker name
EMG broker account, EMBL-EBI
collection date
2011-11-25
completeness score
93.64
completeness software
CheckM
contamination score
1.82
environment (biome)
Engineered
environment (feature)
Engineered
environment (material)
Engineered
geographic location (country and/or sea)
Australia
geographic location (latitude)
-27.485973
geographic location (longitude)
153.1907
investigation type
metagenome-assembled genome
isolation_source
metagenome
metagenomic source
metagenome
project name
Two lab-scale EBPR bioreactors were operated for approximately one year with samples taken at multiple time points to assess the dynamics of the microbial and viral communities.
sample derived from
SAMN02850039
sample name
SRR1506988_bin.95_CONCOCT_v1.1_MAG
scientific_name
uncultured Anaerolineales bacterium
sequencing method
Illumina HiSeq 2000
taxonomic identity marker
multi-marker approach