Binned metagenome of coassembled cestode body samples
parasite metagenome
This cestode body sample represents a metagenomic bin coassembled from the metagenomic samples ERS11428749,ERS11428758,ERS11428766,ERS11428787,ERS11428797,ERS11428799,ERS11428805,ERS11428808
ENA first public
2022-04-01
ENA last update
2022-04-01
External Id
SAMEA13843484
INSDC center alias
UPPSALA UNIVERSITY
INSDC center name
UPPSALA UNIVERSITY
INSDC first public
2022-04-01T00:26:41Z
INSDC last update
2022-04-01T00:26:41Z
INSDC status
public
Submitter Id
cestode_body_binned
assembly quality
Many fragments with little to no review of assembly other than reporting of standard assembly statistics
assembly software
MEGAHIT;1.1.1;min-contig-len 1000, presets meta-sensitive
binning parameters
coverage, kmer, GC
binning software
Anvi'o;7.0
collection date
2018-04
environment (biome)
animal-associated environment
environment (feature)
environment associated with an aquatic invertebrate
environment (material)
tissue
geographic location (country and/or sea)
Norway
geographic location (latitude)
60.49969
geographic location (longitude)
4.92814
investigation type
metagenome
isolation source
cestode body tissue
metagenomic source
parasite metagenome
project name
Parasitic cestode microbiome
sample derived from
ERS11428749,ERS11428758,ERS11428766,ERS11428787,ERS11428797,ERS11428799,ERS11428805,ERS11428808
sample name
cestode_body_binned
sequencing method
BGI