ERS4065069
Rhodoplanes serenus
Proteobacteria assembled from Lake Maggiore
assembly software
MEGAHIT; kmer set 29,49,69,89,109,119,129,149
broad-scale environmental context
freshwater lake
collection date
2019-04-09
sample derived from
ERS4065069
geographic location (longitude)
8.65
binning parameters
coverage and kmer
contamination score
3.01
ENA-FIRST-PUBLIC
2022-07-21T16:25:28Z
ENA-LAST-UPDATE
2022-07-21T16:25:28Z
completeness software
checkm
geographic location (country and/or sea)
Italy
binning software
MetaBAT2
organism
Rhodoplanes piscinae
assembly quality
Multiple fragments where gaps span repetitive regions. Presence of the 23S, 16S, and 5S rRNA genes and at least 18 tRNAs
taxonomic identity marker
multi-marker approach
completeness score
91.03
environmental medium
fresh water
geographic location (latitude)
45.966667
scientific_name
Rhodoplanes piscinae
investigation type
metagenome-assembled genome
local environmental context
lake
metagenomic source
freshwater metagenome
project name
PRJEB35640
sequencing method
Illumina NovaSeq 6000
isolation_source
Freshwater lake
ENA-FIRST-PUBLIC
2022-07-21
ENA-LAST-UPDATE
2022-07-21