Metagenome-assembled genome: SRR7721874_bin.56_CONCOCT_v1.1_MAG
uncultured Sutterella sp.
This sample represents a Third Party Annotation (TPA) Metagenome-Assembled Genome (MAG) assembled from the metagenomic run SRR7721874 of study SRP158402.
ENA-FIRST-PUBLIC
2023-01-03
ENA-LAST-UPDATE
2023-01-03
External Id
SAMEA14086062
INSDC center alias
EBI
INSDC center name
European Bioinformatics Institute
INSDC first public
2023-01-03T00:33:30Z
INSDC last update
2023-01-03T00:33:30Z
INSDC status
public
Submitter Id
SRR7721874_bin.56_CONCOCT_v1.1_MAG
assembly quality
Many fragments with little to no review of assembly other than reporting of standard assembly statistics
assembly software
metaspades_v3.13.0
binning parameters
Default
binning software
CONCOCT v1.1
broker name
EMG broker account, EMBL-EBI
collection date
2017-03-01
completeness score
97.52
completeness software
CheckM
contamination score
0.16
environment (biome)
Host-associated
environment (feature)
Human
environment (material)
Digestive system
geographic location (country and/or sea)
China
geographic location (latitude)
39.916668
geographic location (longitude)
116.38333
investigation type
metagenome-assembled genome
isolation_source
human gut metagenome
metagenomic source
human gut metagenome
project name
Metagenomic data of gut microbiota in T2D diabetes patients before and after three-day metformin treatment
sample derived from
SAMN09864068
sample name
SRR7721874_bin.56_CONCOCT_v1.1_MAG
scientific_name
uncultured Sutterella sp.
sequencing method
Illumina HiSeq 4000
taxonomic identity marker
multi-marker approach