Metagenome-assembled genome: SRR8317176_bin.37_CONCOCT_v1.1_MAG
Enterococcus durans
This sample represents a Third Party Annotation (TPA) Metagenome-Assembled Genome (MAG) assembled from the metagenomic run SRR8317176 of study SRP173438.
ENA-FIRST-PUBLIC
2023-01-03
ENA-LAST-UPDATE
2023-01-03
External Id
SAMEA14086152
INSDC center alias
EBI
INSDC center name
European Bioinformatics Institute
INSDC first public
2023-01-03T00:33:32Z
INSDC last update
2023-01-03T00:33:32Z
INSDC status
public
Submitter Id
SRR8317176_bin.37_CONCOCT_v1.1_MAG
assembly quality
Many fragments with little to no review of assembly other than reporting of standard assembly statistics
assembly software
metaSPAdes v3.12.0
binning parameters
Default
binning software
CONCOCT v1.1
broker name
EMG broker account, EMBL-EBI
collection date
2017-03-23
completeness score
99.63
completeness software
CheckM
contamination score
0.75
environment (biome)
Host-associated
environment (feature)
Human
environment (material)
Digestive system
geographic location (country and/or sea)
Russia
geographic location (latitude)
59.56
geographic location (longitude)
30.2
investigation type
metagenome-assembled genome
isolation_source
human gut metagenome
metagenomic source
human gut metagenome
project name
WGS metagenomics sequencing data describing fecal transplant influence on healthy voluntaries.
sample derived from
SAMN10593413
sample name
SRR8317176_bin.37_CONCOCT_v1.1_MAG
scientific_name
Enterococcus durans
sequencing method
Illumina HiSeq 2500
taxonomic identity marker
multi-marker approach