ERS6344549
Legionella genomosp. 1
Proteobacteria assembled from Lake Medard
assembly software
MEGAHIT; kmer set 29,49,69,89,109,119,129,149
broad-scale environmental context
freshwater lake
collection date
2019-10-21
sample derived from
ERS6344549
geographic location (longitude)
12.584932
binning parameters
coverage and kmer
contamination score
1.07
ENA-FIRST-PUBLIC
2022-07-21T16:25:28Z
ENA-LAST-UPDATE
2022-07-21T16:25:28Z
completeness software
checkm
geographic location (country and/or sea)
Czech Republic
binning software
MetaBAT2
organism
Legionella sp. 2055-AUS-E
assembly quality
Multiple fragments where gaps span repetitive regions. Presence of the 23S, 16S, and 5S rRNA genes and at least 18 tRNAs
taxonomic identity marker
multi-marker approach
completeness score
95.91
environmental medium
fresh water
geographic location (latitude)
50.179564
scientific_name
Legionella sp. 2055-AUS-E
investigation type
metagenome-assembled genome
local environmental context
lake
metagenomic source
freshwater metagenome
project name
PRJEB35640
sequencing method
Illumina NovaSeq 6000
isolation_source
Freshwater lake
ENA-FIRST-PUBLIC
2022-07-21
ENA-LAST-UPDATE
2022-07-21