Metagenome-assembled genome: SRR12395700_bin.63_CONCOCT_v1.1_MAG
uncultured Thomasclavelia sp.
This sample represents a Third Party Annotation (TPA) Metagenome-Assembled Genome (MAG) assembled from the metagenomic run SRR12395700 of study SRP276112.
assembly software
metaSPAdes v3.14.1
environment (material)
Digestive system
collection date
2015-08-20
sample derived from
SAMN15661749
geographic location (longitude)
-81.24
binning parameters
Default
contamination score
0.0
ENA-FIRST-PUBLIC
2023-01-03T00:33:08Z
ENA-LAST-UPDATE
2023-01-03T00:33:08Z
completeness software
CheckM
environment (biome)
Host-associated
environment (feature)
Human
geographic location (country and/or sea)
Canada
binning software
CONCOCT v1.1
organism
uncultured Erysipelatoclostridium sp.
assembly quality
Many fragments with little to no review of assembly other than reporting of standard assembly statistics
taxonomic identity marker
multi-marker approach
completeness score
100
geographic location (latitude)
42.98
scientific_name
uncultured Erysipelatoclostridium sp.
common name
investigation type
metagenome-assembled genome
metagenomic source
human gut metagenome
project name
Metagenomic sequencing of the gut from kidney stone patients and healthy controls
sequencing method
Illumina NovaSeq 6000
isolation_source
human gut metagenome
ENA-FIRST-PUBLIC
2023-01-03
ENA-LAST-UPDATE
2023-01-03