Metagenome-assembled genome: SRR7515930_bin.63_CONCOCT_v1.1_MAG
uncultured Pseudomonadota bacterium
This sample represents a Third Party Annotation (TPA) Metagenome-Assembled Genome (MAG) assembled from the metagenomic run SRR7515930 of study SRP153197.
ENA-FIRST-PUBLIC
2023-01-03
ENA-LAST-UPDATE
2023-01-03
External Id
SAMEA14082573
INSDC center alias
EBI
INSDC center name
European Bioinformatics Institute
INSDC first public
2023-01-03T00:32:28Z
INSDC last update
2023-01-03T00:32:28Z
INSDC status
public
Submitter Id
SRR7515930_bin.63_CONCOCT_v1.1_MAG
assembly quality
Many fragments with little to no review of assembly other than reporting of standard assembly statistics
assembly software
metaspadesv3.12.0
binning parameters
Default
binning software
CONCOCT v1.1
broker name
EMG broker account, EMBL-EBI
collection date
2016-02-17
completeness score
96.45
completeness software
CheckM
contamination score
3.55
environment (biome)
Engineered
environment (feature)
Engineered
environment (material)
Engineered
geographic location (country and/or sea)
Saudi Arabia
geographic location (latitude)
22.299927
geographic location (longitude)
39.116756
investigation type
metagenome-assembled genome
isolation_source
metagenome
metagenomic source
metagenome
project name
This project aims to understand the microbial community and its functional potential of biofouled reverse osmosis membranes used in water purification.
sample derived from
SAMN09650985
sample name
SRR7515930_bin.63_CONCOCT_v1.1_MAG
scientific_name
uncultured proteobacterium
sequencing method
Illumina HiSeq 4000
taxonomic identity marker
multi-marker approach