Metagenome-assembled genome: SRR3330202_bin.59_CONCOCT_v1.1_MAG
uncultured Chryseobacterium sp.
This sample represents a Third Party Annotation (TPA) Metagenome-Assembled Genome (MAG) assembled from the metagenomic run SRR3330202 of study SRP072814.
ENA-FIRST-PUBLIC
2023-01-03
ENA-LAST-UPDATE
2023-01-03
External Id
SAMEA14081769
INSDC center alias
EBI
INSDC center name
European Bioinformatics Institute
INSDC first public
2023-01-03T00:32:43Z
INSDC last update
2023-01-03T00:32:43Z
INSDC status
public
Submitter Id
SRR3330202_bin.59_CONCOCT_v1.1_MAG
assembly quality
Many fragments with little to no review of assembly other than reporting of standard assembly statistics
assembly software
metaspadesv3.12.0
binning parameters
Default
binning software
CONCOCT v1.1
broker name
EMG broker account, EMBL-EBI
collection date
2014-08-29
completeness score
75.02
completeness software
CheckM
contamination score
1.94
environment (biome)
Engineered
environment (feature)
Engineered
environment (material)
Engineered
geographic location (country and/or sea)
Singapore
geographic location (latitude)
1.3483
geographic location (longitude)
103.6831
investigation type
metagenome-assembled genome
isolation_source
metagenome
metagenomic source
metagenome
project name
To reveal the transition of structure and function of microbial community in forwards osmosis anaerobic membrane bioreactors
sample derived from
SAMN04604782
sample name
SRR3330202_bin.59_CONCOCT_v1.1_MAG
scientific_name
uncultured Chryseobacterium sp.
sequencing method
Illumina HiSeq 2500
taxonomic identity marker
multi-marker approach