Metagenome-assembled genome: SRR7299214_bin.73_CONCOCT_v1.1_MAG
uncultured Bacteroidota bacterium
This sample represents a Third Party Annotation (TPA) Metagenome-Assembled Genome (MAG) assembled from the metagenomic run SRR7299214 of study SRP150380.
ENA-FIRST-PUBLIC
2023-01-03
ENA-LAST-UPDATE
2023-01-03
External Id
SAMEA14082552
INSDC center alias
EBI
INSDC center name
European Bioinformatics Institute
INSDC first public
2023-01-03T00:32:23Z
INSDC last update
2023-01-03T00:32:23Z
INSDC status
public
Submitter Id
SRR7299214_bin.73_CONCOCT_v1.1_MAG
assembly quality
Many fragments with little to no review of assembly other than reporting of standard assembly statistics
assembly software
metaspadesv3.12.0
binning parameters
Default
binning software
CONCOCT v1.1
broker name
EMG broker account, EMBL-EBI
collection date
2015-06-15
completeness score
97.85
completeness software
CheckM
contamination score
0.54
environment (biome)
Engineered
environment (feature)
Engineered
environment (material)
Engineered
geographic location (country and/or sea)
Jamaica
geographic location (latitude)
18.01052
geographic location (longitude)
-76.85667
investigation type
metagenome-assembled genome
isolation_source
metagenome
metagenomic source
metagenome
project name
Metagenome sequence of the microbial community from an open air leachate pond from the Riverton City dump servicing Kingston, St. Andrews, St. Catherine, and St. Thomas in Jamaica.
sample derived from
SAMN09401598
sample name
SRR7299214_bin.73_CONCOCT_v1.1_MAG
scientific_name
uncultured Bacteroidetes bacterium
sequencing method
Illumina MiSeq
taxonomic identity marker
multi-marker approach