Metagenome-assembled genome: ERR1995204_bin.122_CONCOCT_v1.1_MAG
uncultured Flavobacteriales bacterium
This sample represents a Third Party Annotation (TPA) Metagenome-Assembled Genome (MAG) assembled from the metagenomic run ERR1995204 of study ERP017130.
ENA-FIRST-PUBLIC
2023-01-03
ENA-LAST-UPDATE
2023-01-03
External Id
SAMEA14081619
INSDC center alias
EBI
INSDC center name
European Bioinformatics Institute
INSDC first public
2023-01-03T00:32:45Z
INSDC last update
2023-01-03T00:32:45Z
INSDC status
public
Submitter Id
ERR1995204_bin.122_CONCOCT_v1.1_MAG
assembly quality
Many fragments with little to no review of assembly other than reporting of standard assembly statistics
assembly software
unknown v0.0
binning parameters
Default
binning software
CONCOCT v1.1
broker name
EMG broker account, EMBL-EBI
collection date
2016-06-22
completeness score
57.22
completeness software
CheckM
contamination score
1.43
environment (biome)
Engineered
environment (feature)
Engineered
environment (material)
Engineered
geographic location (country and/or sea)
USA
geographic location (latitude)
27.542
geographic location (longitude)
-97.286
investigation type
metagenome-assembled genome
isolation_source
metagenome
metagenomic source
metagenome
project name
Plastic associated metagenomes from LMFS.
sample derived from
SAMEA4461764
sample name
ERR1995204_bin.122_CONCOCT_v1.1_MAG
scientific_name
uncultured Flavobacteriales bacterium
sequencing method
Illumina HiSeq 2500
taxonomic identity marker
multi-marker approach