Metagenome-assembled genome: SRR6713632_bin.25_CONCOCT_v1.1_MAG
uncultured Alcaligenaceae bacterium
This sample represents a Third Party Annotation (TPA) Metagenome-Assembled Genome (MAG) assembled from the metagenomic run SRR6713632 of study SRP132747.
ENA-FIRST-PUBLIC
2023-01-03
ENA-LAST-UPDATE
2023-01-03
External Id
SAMEA14082493
INSDC center alias
EBI
INSDC center name
European Bioinformatics Institute
INSDC first public
2023-01-03T00:32:36Z
INSDC last update
2023-01-03T00:32:36Z
INSDC status
public
Submitter Id
SRR6713632_bin.25_CONCOCT_v1.1_MAG
assembly quality
Many fragments with little to no review of assembly other than reporting of standard assembly statistics
assembly software
metaspadesv3.12.0
binning parameters
Default
binning software
CONCOCT v1.1
broker name
EMG broker account, EMBL-EBI
collection date
2015-12-17
completeness score
96.92
completeness software
CheckM
contamination score
0.0
environment (biome)
Engineered
environment (feature)
Engineered
environment (material)
Engineered
geographic location (country and/or sea)
China
geographic location (latitude)
not provided
geographic location (longitude)
not provided
investigation type
metagenome-assembled genome
isolation_source
metagenome
metagenomic source
metagenome
project name
Monitoring the dynamics of ARGs during thermophilic composting
sample derived from
SAMN08517344
sample name
SRR6713632_bin.25_CONCOCT_v1.1_MAG
scientific_name
uncultured Alcaligenaceae bacterium
sequencing method
HiSeq X Ten
taxonomic identity marker
multi-marker approach