Metagenome-assembled genome: SRR6853362_bin.3_CONCOCT_v1.1_MAG
Acinetobacter pittii
This sample represents a Third Party Annotation (TPA) Metagenome-Assembled Genome (MAG) assembled from the metagenomic run SRR6853362 of study SRP135937.
ENA-FIRST-PUBLIC
2023-01-03
ENA-LAST-UPDATE
2023-01-03
External Id
SAMEA14082534
INSDC center alias
EBI
INSDC center name
European Bioinformatics Institute
INSDC first public
2023-01-03T00:32:19Z
INSDC last update
2023-01-03T00:32:19Z
INSDC status
public
Submitter Id
SRR6853362_bin.3_CONCOCT_v1.1_MAG
assembly quality
Many fragments with little to no review of assembly other than reporting of standard assembly statistics
assembly software
metaspadesv3.13.0
binning parameters
Default
binning software
CONCOCT v1.1
broker name
EMG broker account, EMBL-EBI
collection date
2015-05-15
completeness score
99.63
completeness software
CheckM
contamination score
0.31
environment (biome)
Engineered
environment (feature)
Engineered
environment (material)
Engineered
geographic location (country and/or sea)
USA
geographic location (latitude)
not provided
geographic location (longitude)
not provided
investigation type
metagenome-assembled genome
isolation_source
metagenome
metagenomic source
metagenome
project name
Metagenomes created from samples collected from the International Space Station
sample derived from
SAMN05581705
sample name
SRR6853362_bin.3_CONCOCT_v1.1_MAG
scientific_name
Acinetobacter pittii
sequencing method
Illumina HiSeq 4000
taxonomic identity marker
multi-marker approach