marine metagenome
collection_date
2021-04-16T00:40:00Z
depth
20 m
env_broad_scale
7 Other
env_local_scale
7.2.1 Open ocean water-conservation
env_medium
Sea water [ENVO_00002149]
geo_loc_name
Australia:Moreton Bay Marine Park [GAZ_00088305]
lat_lon
27.345 S 153.562 E
sample_id
102.100.100/402911
source_mat_id
http://hdl.handle.net/102.100.100/402911
sample_site_location_description
North Stradbroke Island
sample_submitter
Jodie van de Kamp [https://orcid.org/0000-0003-2167-0938]
sample_attribution
IMOS|CSIRO
funding_agency
IMOS|CSIRO
samp_collect_device
meth_1.4 (https://research.csiro.au/ambsm/)
samp_mat_process
meth_1.4 (https://research.csiro.au/ambsm/)
store_cond
meth_1.4 (https://research.csiro.au/ambsm/)
biotic_relationship
free living
general_env_feature
Marine - neritic (coastal off shore)
notes
collection_date:UTC converted bgc SampleTime_Local|CTD depth:No data
sample_type
Pelagic
nucl_acid_ext
meth_3.1.9 (https://research.csiro.au/ambsm/)
dna_concentration_submitter
Not provided
dna_concentration_submitter_meth
Not provided
alkalinity
Not provided
alkalinity_meth
Not provided
allo
below detection limit
allo_meth
meth_2.2 (https://research.csiro.au/ambsm/)
alpha_beta_car
0.02 mg/m3
alpha_beta_car_meth
meth_2.2 (https://research.csiro.au/ambsm/)
ammonium
0.07 μmol/L
ammonium_meth
meth_2.2 (https://research.csiro.au/ambsm/)
anth
below detection limit
anth_meth
meth_2.2 (https://research.csiro.au/ambsm/)
asta
0.001 mg/m3
asta_meth
meth_2.2 (https://research.csiro.au/ambsm/)
but_fuco
0.023 mg/m3
but_fuco_meth
meth_2.2 (https://research.csiro.au/ambsm/)
cantha
below detection limit
cantha_meth
meth_2.2 (https://research.csiro.au/ambsm/)
chlorophyll_a
0.227 mg/m3
chlorophyll_a_meth
meth_2.2 (https://research.csiro.au/ambsm/)
chlorophyll_b
0.017 mg/m3
chlorophyll_b_meth
meth_2.2 (https://research.csiro.au/ambsm/)
chlorophyll_c1
below detection limit
chlorophyll_c1_meth
meth_2.2 (https://research.csiro.au/ambsm/)
chlorophyll_c2
0.035 mg/m3
chlorophyll_c2_meth
meth_2.2 (https://research.csiro.au/ambsm/)
chlorophyll_c3
0.026 mg/m3
chlorophyll_c3_meth
meth_2.2 (https://research.csiro.au/ambsm/)
chlorophyll_ctd
Not provided
chlorophyll_ctd_meth
Not provided
conductivity_aqueous
Not provided
conductivity_aqueous_meth
Not provided
cphlide_a
0.034 mg/m3
cphlide_a_meth
meth_2.2 (https://research.csiro.au/ambsm/)
density
Not provided
density_meth
Not provided
diadino
0.007 mg/m3
diadino_meth
meth_2.2 (https://research.csiro.au/ambsm/)
diato
below detection limit
diato_meth
meth_2.2 (https://research.csiro.au/ambsm/)
dino
below detection limit
dino_meth
meth_2.2 (https://research.csiro.au/ambsm/)
dv_cphl_a_and_cphl_a
0.27 mg/m3
dv_cphl_a_and_cphl_a_meth
meth_2.2 (https://research.csiro.au/ambsm/)
dv_cphl_a
0.043 mg/m3
dv_cphl_a_meth
meth_2.2 (https://research.csiro.au/ambsm/)
dv_cphl_b_and_cphl_b
0.017 mg/m3
dv_cphl_b_and_cphl_b_meth
meth_2.2 (https://research.csiro.au/ambsm/)
dv_cphl_b
below detection limit
dv_cphl_b_meth
meth_2.2 (https://research.csiro.au/ambsm/)
echin
below detection limit
echin_meth
meth_2.2 (https://research.csiro.au/ambsm/)
fuco
0.025 mg/m3
fuco_meth
meth_2.2 (https://research.csiro.au/ambsm/)
gyro
below detection limit
gyro_meth
meth_2.2 (https://research.csiro.au/ambsm/)
hex_fuco
0.051 mg/m3
hex_fuco_meth
meth_2.2 (https://research.csiro.au/ambsm/)
imos_site_code
NRSNSI
keto_hex_fuco
below detection limit
keto_hex_fuco_meth
meth_2.2 (https://research.csiro.au/ambsm/)
lut
below detection limit
lut_meth
meth_2.2 (https://research.csiro.au/ambsm/)
mg_dvp
below detection limit
mg_dvp_meth
meth_2.2 (https://research.csiro.au/ambsm/)
neo
0.002 mg/m3
neo_meth
meth_2.2 (https://research.csiro.au/ambsm/)
nitrate
0.2 μmol/L
nitrate_meth
meth_2.2 (https://research.csiro.au/ambsm/)
nitrite
0.16 μmol/L
nitrite_meth
meth_2.2 (https://research.csiro.au/ambsm/)
nrs_sample_code
NSI20210415_20
nrs_trip_code
NSI20210415
oxygen
Not provided
oxygen_meth
Not provided
oxygen_ctd_vol
Not provided
oxygen_ctd_vol_meth
Not provided
perid
0.006 mg/m3
perid_meth
meth_2.2 (https://research.csiro.au/ambsm/)
phide_a
below detection limit
phide_a_meth
meth_2.2 (https://research.csiro.au/ambsm/)
phosphate
0.18 μmol/L
phosphate_meth
meth_2.2 (https://research.csiro.au/ambsm/)
phytin_a
below detection limit
phytin_a_meth
meth_2.2 (https://research.csiro.au/ambsm/)
phytin_b
below detection limit
phytin_b_meth
meth_2.2 (https://research.csiro.au/ambsm/)
picoeukaryotes
4906 cells/mL
picoeukaryotes_meth
meth_2.2 (https://research.csiro.au/ambsm/)
pras
0.003 mg/m3
pras_meth
meth_2.2 (https://research.csiro.au/ambsm/)
prochlorococcus
13498.5 cells/mL
prochlorococcus_meth
meth_2.2 (https://research.csiro.au/ambsm/)
pyrophide_a
below detection limit
pyrophide_a_meth
meth_2.2 (https://research.csiro.au/ambsm/)
pyrophytin_a
below detection limit
pyrophytin_a_meth
meth_2.2 (https://research.csiro.au/ambsm/)
salinity
Not provided
salinity_meth
Not provided
salinity_lab
35.217 PSU
salinity_lab_meth
meth_2.2 (https://research.csiro.au/ambsm/)
samp_size
Not provided
samp_vol_we_dna_ext
Not provided
sample_volume_notes
Not provided
secchi_depth
22.8 m
secchi_depth_meth
meth_2.2 (https://research.csiro.au/ambsm/)
silicate
0.3 μmol/L
silicate_meth
meth_2.2 (https://research.csiro.au/ambsm/)
synechococcus
48647 cells/mL
synechococcus_meth
meth_2.2 (https://research.csiro.au/ambsm/)
temp
Not provided
temp_meth
Not provided
total_co2
Not provided
total_co2_meth
Not provided
tss
Not provided
tss_meth
Not provided
turbidity
Not provided
turbidity_meth
Not provided
url
https://data.bioplatforms.com//organization/australian-microbiome?q=sample_id:102.100.100/402911
viola
0.001 mg/m3
viola_meth
meth_2.2 (https://research.csiro.au/ambsm/)
zea
0.042 mg/m3
zea_meth
meth_2.2 (https://research.csiro.au/ambsm/)
zooplankton_biomass
18.2954 mg/m3
zooplankton_biomass_meth
meth_2.2int (https://research.csiro.au/ambsm/)
AustralianMicrobiome_metadata_defs_url
https://github.com/AusMicrobiome/contextualdb_doc/raw/4.2.0/db_schema_definitions/db_schema_definitions.xlsx
isolation_source
Pelagic
isolate
102.100.100/402911_20
ncbi_txid
408172
BioSampleModel
MIMS.me
BioSampleModel
MIGS/MIMS/MIMARKS.water