Christensenellaceae bacterium
assembly software
metaSPAdes_v3.10.1
broad-scale environmental context
mouse gut
collection date
not provided
sample derived from
SRR7762554
geographic location (longitude)
-75.09098
binning parameters
default parameters, kmer: 4
contamination score
0.88
ENA-FIRST-PUBLIC
2023-02-03T00:46:54Z
ENA-LAST-UPDATE
2023-02-03T00:46:54Z
completeness software
CheckM
geographic location (country and/or sea)
USA
binning software
metaWRAP (MetaBAT2, MaxBin2 and CONCOCT)
organism
Candidatus Borkfalkiaceae bacterium
assembly quality
Many fragments with little to no review of assembly other than reporting of standard assembly statistics
taxonomic identity marker
multi-marker approach
completeness score
74.79
environmental medium
Faeces
geographic location (latitude)
40.07127
scientific_name
Candidatus Borkfalkiaceae bacterium
common name
investigation type
metagenome-assembled genome
local environmental context
mouse-associated habitat
metagenomic source
mouse gut metagenome
project name
Metagenome-assembled genomes from the Mouse Gastrointestinal Bacteria Catalogue
sequencing method
Illumina
isolation_source
Faeces
ENA-FIRST-PUBLIC
2023-02-03
ENA-LAST-UPDATE
2023-02-03