marine metagenome
collection_date
2020-11-24T21:23:00Z
depth
2 m
env_broad_scale
7 Other
env_local_scale
7.1.3 Coastal water-intensive use
env_medium
Saline water [ENVO_00002010]
geo_loc_name
Australia:Port Phillip Bay [GAZ_00045304]
lat_lon
37.8702 S 144.9338 E
sample_id
102.100.100/139013
source_mat_id
http://hdl.handle.net/102.100.100/139013
sample_site_location_description
Hobsons - Port Phillip Bay
sample_submitter
Craig D.H. Sherman[craig.sherman@deakin.edu.au;https://orcid.org/0000-0003-2099-0462]
sample_attribution
Deakin University; CSIRO; IMOS
funding_agency
Environment Protection Agency Victoria; Deakin University; CSIRO; IMOS
samp_collect_device
meth_1.5.1 (https://research.csiro.au/ambsm/)
samp_mat_process
meth_1.5.1 (https://research.csiro.au/ambsm/)
store_cond
meth_1.5.1 (https://research.csiro.au/ambsm/)
biotic_relationship
free living
general_env_feature
Marine - neritic (coastal off shore)
notes
Not provided
sample_type
Coastal water
nucl_acid_ext
meth_3.1.9 (https://research.csiro.au/ambsm/)
dna_concentration_submitter
16.96 ng/μL
dna_concentration_submitter_meth
meth_3.3.1 (https://research.csiro.au/ambsm/)
absorbance_260_280_ratio_submitter
2.25
alkalinity
not collected
ammonium
1 μmol/L
ammonium_meth
meth_2.29 (https://research.csiro.au/ambsm/)
chlorophyll_a
1.6 mg/m3
chlorophyll_a_meth
meth_2.29 (https://research.csiro.au/ambsm/)
chlorophyll_ctd
not collected
coastal_id
EPA VIC Site_Id 1991
conductivity_aqueous
not collected
fluor
1.711 AU
fluor_meth
meth_2.29 (https://research.csiro.au/ambsm/)
imos_site_code
CSHOB
microbial_abundance
1644055 cells/mL
microbial_abundance_meth
meth_2.2 (https://research.csiro.au/ambsm/)
nitrate
0.643 μmol/L
nitrate_meth
meth_2.29 (https://research.csiro.au/ambsm/)
nitrate_nitrite
0.785 μmol/L
nitrate_nitrite_meth
meth_2.29 (https://research.csiro.au/ambsm/)
nitrite
0.143 μmol/L
nitrite_meth
meth_2.29 (https://research.csiro.au/ambsm/)
oxygen
212.795 μmol/L
oxygen_meth
meth_2.29 (https://research.csiro.au/ambsm/)
par
38.826 μmol/m2/s
par_meth
meth_2.29 (https://research.csiro.au/ambsm/)
part_org_carb
not collected
part_org_carb_meth
Not provided
ph
8.262
ph_meth
meth_2.29 (https://research.csiro.au/ambsm/)
phosphate
1.55 μmol/L
phosphate_meth
meth_2.29 (https://research.csiro.au/ambsm/)
picoeukaryotes
1352 cells/mL
picoeukaryotes_meth
meth_2.2 (https://research.csiro.au/ambsm/)
prochlorococcus
58 cells/mL
prochlorococcus_meth
meth_2.2 (https://research.csiro.au/ambsm/)
salinity
34.072 PSU
salinity_meth
meth_2.29 (https://research.csiro.au/ambsm/)
salinity_lab
not collected
salinity_lab_meth
Not provided
samp_size
Not provided
samp_vol_we_dna_ext
Not provided
sample_volume_notes
Not provided
secchi_depth
2.5 m
secchi_depth_meth
meth_2.29 (https://research.csiro.au/ambsm/)
silicate
4.161 μmol/L
silicate_meth
meth_2.29 (https://research.csiro.au/ambsm/)
synechococcus
3568 cells/mL
synechococcus_meth
meth_2.2 (https://research.csiro.au/ambsm/)
synonyms
HOB20201124_102.100.100/139013_2
temp
18.932 degC
temp_meth
meth_2.29 (https://research.csiro.au/ambsm/)
tot_depth_water_col
not collected
tot_depth_water_col_meth
Not provided
tot_nitro
2.9e-05 %
tot_nitro_meth
meth_2.29 (https://research.csiro.au/ambsm/)
tot_phosp
7.0e-06 %
tot_phosp_meth
meth_2.29 (https://research.csiro.au/ambsm/)
transmittance
not collected
tss
4.5 mg/L
tss_meth
meth_2.29 (https://research.csiro.au/ambsm/)
turbidity
1.791 NTU
turbidity_meth
meth_2.29 (https://research.csiro.au/ambsm/)
url
https://data.bioplatforms.com//organization/australian-microbiome?q=sample_id:102.100.100/139013
AustralianMicrobiome_metadata_defs_url
https://github.com/AusMicrobiome/contextualdb_doc/raw/4.2.0/db_schema_definitions/db_schema_definitions.xlsx
isolation_source
Coastal water
isolate
102.100.100/139013_2
ncbi_txid
408172
BioSampleModel
MIMS.me
BioSampleModel
MIGS/MIMS/MIMARKS.water