marine metagenome
collection_date
2020-10-21T00:40:00Z
depth
2 m
env_broad_scale
7 Other
env_local_scale
7.1.3 Coastal water-intensive use
env_medium
Saline water [ENVO_00002010]
geo_loc_name
Australia:Port Phillip Bay [GAZ_00045304]
lat_lon
38.0293 S 144.5928 E
sample_id
102.100.100/139011
source_mat_id
http://hdl.handle.net/102.100.100/139011
sample_site_location_description
Long Reef - Port Phillip Bay
sample_submitter
Craig D.H. Sherman[craig.sherman@deakin.edu.au;https://orcid.org/0000-0003-2099-0462]
sample_attribution
Deakin University; CSIRO; IMOS
funding_agency
Environment Protection Agency Victoria; Deakin University; CSIRO; IMOS
samp_collect_device
meth_1.5.1 (https://research.csiro.au/ambsm/)
samp_mat_process
meth_1.5.1 (https://research.csiro.au/ambsm/)
store_cond
meth_1.5.1 (https://research.csiro.au/ambsm/)
biotic_relationship
free living
general_env_feature
Marine - neritic (coastal off shore)
notes
Not provided
sample_type
Coastal water
nucl_acid_ext
meth_3.1.9 (https://research.csiro.au/ambsm/)
dna_concentration_submitter
not collected
dna_concentration_submitter_meth
Not provided
absorbance_260_280_ratio_submitter
-9999
alkalinity
not collected
ammonium
1.071 μmol/L
ammonium_meth
meth_2.29 (https://research.csiro.au/ambsm/)
chlorophyll_a
0.5 mg/m3
chlorophyll_a_meth
meth_2.29 (https://research.csiro.au/ambsm/)
chlorophyll_ctd
not collected
coastal_id
EPA VIC Site_Id 369
conductivity_aqueous
not collected
fluor
0.57 AU
fluor_meth
meth_2.29 (https://research.csiro.au/ambsm/)
imos_site_code
CSLOR
microbial_abundance
2224930 cells/mL
microbial_abundance_meth
meth_2.2 (https://research.csiro.au/ambsm/)
nitrate
not collected
nitrate_meth
Not provided
nitrate_nitrite
0.714 μmol/L
nitrate_nitrite_meth
meth_2.29 (https://research.csiro.au/ambsm/)
nitrite
0.143 μmol/L
nitrite_meth
meth_2.29 (https://research.csiro.au/ambsm/)
oxygen
295.581 μmol/L
oxygen_meth
meth_2.29 (https://research.csiro.au/ambsm/)
par
717.59 μmol/m2/s
par_meth
meth_2.29 (https://research.csiro.au/ambsm/)
part_org_carb
not collected
part_org_carb_meth
Not provided
ph
8.714
ph_meth
meth_2.29 (https://research.csiro.au/ambsm/)
phosphate
3.551 μmol/L
phosphate_meth
meth_2.29 (https://research.csiro.au/ambsm/)
picoeukaryotes
15539 cells/mL
picoeukaryotes_meth
meth_2.2 (https://research.csiro.au/ambsm/)
prochlorococcus
2216 cells/mL
prochlorococcus_meth
meth_2.2 (https://research.csiro.au/ambsm/)
salinity
35.615 PSU
salinity_meth
meth_2.29 (https://research.csiro.au/ambsm/)
salinity_lab
not collected
salinity_lab_meth
Not provided
samp_size
Not provided
samp_vol_we_dna_ext
Not provided
sample_volume_notes
Not provided
secchi_depth
4 m
secchi_depth_meth
meth_2.29 (https://research.csiro.au/ambsm/)
silicate
3.828 μmol/L
silicate_meth
meth_2.29 (https://research.csiro.au/ambsm/)
synechococcus
7395 cells/mL
synechococcus_meth
meth_2.2 (https://research.csiro.au/ambsm/)
synonyms
LOR20201021_102.100.100/139011_2
temp
16.374 degC
temp_meth
meth_2.29 (https://research.csiro.au/ambsm/)
tot_depth_water_col
not collected
tot_depth_water_col_meth
Not provided
tot_nitro
not collected
tot_nitro_meth
Not provided
tot_phosp
not collected
tot_phosp_meth
Not provided
transmittance
not collected
tss
5.7 mg/L
tss_meth
meth_2.29 (https://research.csiro.au/ambsm/)
turbidity
0.713 NTU
turbidity_meth
meth_2.29 (https://research.csiro.au/ambsm/)
url
https://data.bioplatforms.com//organization/australian-microbiome?q=sample_id:102.100.100/139011
AustralianMicrobiome_metadata_defs_url
https://github.com/AusMicrobiome/contextualdb_doc/raw/4.2.0/db_schema_definitions/db_schema_definitions.xlsx
isolation_source
Coastal water
isolate
102.100.100/139011_2
ncbi_txid
408172
BioSampleModel
MIMS.me
BioSampleModel
MIGS/MIMS/MIMARKS.water