12701.Sh5.2.1; Comparative analyses of foregut and hindgut bacterial communities in Slick Holsteins and Wild type Holsteins in a tropical climate
bovine gut metagenome
ENA-FIRST-PUBLIC
2023-06-16
ENA-LAST-UPDATE
2023-06-16
External Id
SAMEA113609707
INSDC center alias
UCSDMI
INSDC center name
University of California San Diego Microbiome Initiative
INSDC first public
2023-06-16T20:19:58Z
INSDC last update
2023-06-16T20:19:58Z
INSDC status
public
Submitter Id
qiita_sid_12701:12701.Sh5.2.1
animal
Slick5
collection date
2022
collection_timestamp
2022
country
Puerto Rico
dna_extracted
TRUE
elevation
66
empo_1
Host-associated
empo_2
Host-associated (non-saline)
empo_3
Animal (non-saline)
empo_4
Animal distal gut (non-saline)
env_biome
rangeland biome
env_feature
animal-associated habitat
env_material
intestine environment
env_package
host-associated
geo_loc_name
Puerto Rico
geographic location (country and/or sea)
Puerto Rico
host scientific name
Bos taurus
host_age
not provided
host_age_units
years
host_body_habitat
UBERON:gastrointestinal system
host_body_product
UBERON:lumen of gut
host_body_site
UBERON:digestive tract
host_common_name
cow
host_life_stage
adult
host_subject_id
Slick5
host_taxid
9913
individual_animal
Slick5
latitude
18.027435
longitude
-67.094955
physical_specimen_location
UPR
physical_specimen_remaining
TRUE
project_name
Comparative analyses of foregut and hindgut bacterial communities in Slick Holsteins and Wild type Holsteins in a tropical climate
sample name
qiita_sid_12701:12701.Sh5.2.1
sample_site
hindgut
sample_type
hindgut
scientific_name
bovine gut metagenome
sex
not provided
species
slick-hair_Holsteins
species_samplesite
slick-hair_Holsteins_hindgut