blank sample
ENA first public
2024-01-01
External Id
SAMEA115099316
INSDC center name
Ifremer
INSDC last update
2024-01-12T10:52:24Z
INSDC status
public
Submitter Id
sam_Rem-T2n3
TARGETED_LOCI
16S rRNA
adapters
5'-CTTTCCCTACACGACGCTCTTCCGATCT-3' ; 5'-GGAGTTCAGACGTGTGCTCTTCCGATCT-3'
broad-scale environmental context
not applicable
broker name
SeBiMER
collecting institution
ifremer
collection date
not collected
common name
blank sample
dev_stage
not applicable
environmental medium
not applicable
environmental package
host-associated
environmental_sample
yes
geographic location (country and/or sea)
missing: control sample
geographic location (latitude)
missing: control sample
geographic location (longitude)
missing: control sample
geographic location (region and locality)
missing: control sample
investigation type
bacteria_archaea
isolate
not applicable
isolation_source
missing: control sample
local environmental context
not applicable
multiplex identifiers
CTGTGC
pcr primers
WHOI341 : 5'-CCTACGGGNGGCWGCAG-3 ; WHOI785 : 5-GACTACHVGGGTATCTAATCC-3
project name
rimicaris_juveniles
sample name
sam_Rem-T2n3
sample_description
Blank sample amplified by Nested PCR.
sample_name
Rem-T2n3
scientific_name
blank sample
sequencing method
Sequencing by synthesis (Illumina)
target gene
16S rRNA
target subfragment
V3V4
tissue_type
not applicable