seawater metagenome
geographic location (depth)
1 m
environment (material)
not applicable
sample_description
Blank used to avoid bacterial contamination
collection date
missing: control sample
target gene
16S rRNA
environment (biome)
not applicable
environment (feature)
not applicable
geographic location (country and/or sea)
New Caledonia
sample_name
Seblancbact2
adapters
5'-CTTTCCCTACACGACGCTCTTCCGATCT-3' ; 5'-GGAGTTCAGACGTGTGCTCTTCCGATCT-3'
organism
seawater metagenome
environmental package
none
environmental_sample
Yes
scientific_name
seawater metagenome
common name
seawater metagenome
target subfragment
V4-V5
geographic location (region and locality)
Grand Noumea
investigation type
bacteria_archaea
pcr primers
515F-Y : 5'-GTGYCAGCMGCCGCGGTAA-3' ; 926R : 5'-CCGYCAATTYMTTTRAGTTT-3'
project name
searse
sequencing method
Sequencing by synthesis (Illumina)
collecting institution
IFREMER
multiplex identifiers
CCGTCA
isolation_source
Seawater surface of New Caledonia lagoon
ENA-LAST-UPDATE
2023-09-15