seawater metagenome
geographic location (depth)
1 m
environment (material)
Filtered surface seawater
sample_description
Protists in water sample of station GR in february 15, 2020, filtered on 20m
collection date
2020-02-15
target gene
18S rRNA
geographic location (longitude)
-22.246611
environment (biome)
lagoon
environment (feature)
coastal sea water
geographic location (country and/or sea)
New Caledonia
sample_name
SEBSD13P41
adapters
5'-CTTTCCCTACACGACGCTCTTCCGATCT-3' ; 5'-GGAGTTCAGACGTGTGCTCTTCCGATCT-3'
organism
seawater metagenome
environmental package
none
environmental_sample
Yes
geographic location (latitude)
166.398436
scientific_name
seawater metagenome
common name
seawater metagenome
target subfragment
V4
geographic location (region and locality)
Grand Noumea
investigation type
eukaryote
pcr primers
V4f-PlaGe : 5'-CCAGCASCYGCGGTAATTCC-3' ; V4r-PlaGe : 5'-ACTTTCGTTCTTGATYRA-3'
project name
searse
sequencing method
Sequencing by synthesis (Illumina)
collecting institution
IFREMER
multiplex identifiers
GGATTC
isolation_source
Seawater surface of New Caledonia lagoon
ENA-LAST-UPDATE
2023-09-15