wastewater metagenome
collection_date
2023-02-14
geo_loc_name
USA: South Carolina
isolation_source
wastewater
collection_site_id
Eastover WWTP
ww_population
NA
ww_sample_duration
24
ww_sample_matrix
raw wastewater
ww_sample_type
composite
ww_surv_target_1
SARS-CoV-2
ww_surv_target_1_known_present
yes
collected_by
SC
purpose_of_ww_sampling
public health surveillance community-level
ww_sample_site
wastewater treatment plant
sequenced_by
South Carolina Department of Health and Environmental Control
ww_surv_target_1_protocol
GT Molecular: GT-Digital Wastewater Surveillance Guide
concentration_method
innovaprep ultrafiltration
extraction_control
bcov vaccine
extraction_method
qiagen allprep powerviral dna/rna kit
project_name
GenomeTrakr; LFFM ww project
ww_flow
3609595.46
purpose_of_ww_sequencing
Community Surveillance
ww_surv_target_1_gene
N gene (N1)
ww_surv_target_2
SARS-CoV-2
ww_surv_target_2_conc
1107
ww_surv_target_2_conc_unit
copies/L
ww_surv_target_2_gene
N gene (N2)
ww_surv_target_2_known_present
yes
ww_surv_target_1_conc
1128
ww_surv_target_1_conc_unit
copies/L
collection_time
11:30:00
isolate_name_alias
1214634
BioSampleModel
SARS-CoV-2: wastewater surveillance