bacterium
ENA first public
2024-01-01
External Id
SAMEA113940359
INSDC center name
Ifremer
INSDC last update
2023-07-05T14:21:43Z
INSDC status
public
Submitter Id
sam_IMO35
TARGETED_LOCI
16S rRNA
adapters
5'-CTTTCCCTACACGACGCTCTTCCGATCTACGGRAGGCAGCAG-3' ; 5'-GGAGTTCAGACGTGTGCTCTTCCGATCTTACCAGGGTATCTAATCCT-3'
broker name
SeBiMER
collection date
not provided
common name
bacterium
environment (biome)
phycosphere
environment (feature)
algae culture
environment (material)
algae culture exudates
environmental package
none
environmental_sample
No
geographic location (country and/or sea)
not collected
geographic location (region and locality)
not collected
investigation type
bacteria_archaea
isolation_source
algae culture
pcr primers
343F : 5'-TACGGRAGGCAGCAG-3' ; 784R : 5'-TACCAGGGTATCTAATCCT-3'
project name
IMOTEP
sample name
sam_IMO35
sample_description
Synthetic community with Prymnesium parvum - Fraction: attached - Sampling day: day_7 - Replicate: replicate_6
sample_name
IMO35
scientific_name
bacterium
sequencing method
Sequencing by synthesis (Illumina)
target gene
16S rRNA
target subfragment
V3-V4 region