seawater metagenome
geographic location (depth)
1 m
environment (material)
Filtered surface seawater
sample_description
Bacteria in water sample of station DB in february 14, 2020, filtered on 20m
collection date
2020-02-14
target gene
16S rRNA
geographic location (longitude)
-22.195537
environment (biome)
lagoon
environment (feature)
coastal sea water
geographic location (country and/or sea)
New Caledonia
sample_name
SEBSD08B25
adapters
5'-CTTTCCCTACACGACGCTCTTCCGATCT-3' ; 5'-GGAGTTCAGACGTGTGCTCTTCCGATCT-3'
organism
seawater metagenome
environmental package
none
environmental_sample
Yes
geographic location (latitude)
166.415826
scientific_name
seawater metagenome
common name
seawater metagenome
target subfragment
V4-V5
geographic location (region and locality)
Grand Noumea
investigation type
bacteria_archaea
pcr primers
515F-Y : 5'-GTGYCAGCMGCCGCGGTAA-3' ; 926R : 5'-CCGYCAATTYMTTTRAGTTT-3'
project name
searse
sequencing method
Sequencing by synthesis (Illumina)
collecting institution
IFREMER
multiplex identifiers
CTTGAC
isolation_source
Seawater surface of New Caledonia lagoon
ENA-LAST-UPDATE
2023-09-15