bacterium
adapters
5'-CTTTCCCTACACGACGCTCTTCCGATCTACGGRAGGCAGCAG-3' ; 5'-GGAGTTCAGACGTGTGCTCTTCCGATCTTACCAGGGTATCTAATCCT-3'
environment (material)
algae culture exudates
sample_description
Synthetic community with Alexandrium minutum - Fraction: attached - Sampling day: day_9 - Replicate: replicate_1
organism
bacterium
environmental package
none
environmental_sample
No
collection date
not provided
target gene
16S rRNA
scientific_name
bacterium
common name
bacterium
target subfragment
V3-V4 region
geographic location (region and locality)
not collected
investigation type
bacteria_archaea
pcr primers
343F : 5'-TACGGRAGGCAGCAG-3' ; 784R : 5'-TACCAGGGTATCTAATCCT-3'
project name
IMOTEP
sequencing method
Sequencing by synthesis (Illumina)
TARGETED_LOCI
16S rRNA
environment (biome)
phycosphere
environment (feature)
algae culture
geographic location (country and/or sea)
not collected
isolation_source
algae culture
sample_name
IMO15
ENA-LAST-UPDATE
2023-07-05