marine sediment metagenome
ENA first public
2024-01-01
INSDC center name
Ifremer
INSDC status
public
Submitter Id
sam_1545s19_t7C_g1
TARGETED_LOCI
16S rRNA
broad-scale environmental context
collection of organims
broker name
SeBiMER
collecting institution
IFREMER
collection date
2019-11-01
common name
marine sediment metagenome
depth
not provided
elevation
not provided
environmental medium
seawater
environmental package
sediment
environmental_sample
yes
geographic location (country and/or sea)
Mexico
geographic location (latitude)
27.333333
geographic location (longitude)
-111.25
geographic location (region and locality)
Guaymas Basin
investigation type
bacteria_archaea
isolation_source
marine sediment
local environmental context
microbial community
pcr primers
515F-806R
project name
IODP_385_GUAYMAS_ENRICH
sample name
sam_1545s19_t7C_g1
sample_description
16S rDNA sequences from DNA extraction (DNeasy POwerSoil Pro (Qiagen) from enrichment cultures of Guaymas Basin sediments
sample_name
1545s19_t7C_g1
scientific_name
marine sediment metagenome
sequencing method
Sequencing by synthesis (Illumina)
target gene
16S rRNA
target subfragment
V4-V5