sea urchin metagenome
ENA first public
2025-01-23
INSDC center name
UCSDMI
INSDC status
public
Submitter Id
qiita_sid_14698:14698.133
aboral_surface
NA
aluminum_frozen
NA
animal_condition
Unknown
body_wall_rna_sample_1
DaBW 11a
body_wall_rna_sample_2
DaBW 11b
challenge_category
Unknown
coelomic_fluid_cytology_1
DaCF 11a
coelomic_fluid_cytology_2
DaCF 11b
coelomic_fluid_rna
DaCF 11-RNA
collection date
2022-04-22
collection_timestamp
2022-04-22
collector
Brandt (permit holder); Hewson
country
Virgin Islands
culture_time
Unknown
dasc_qpcr_positive
Unknown
date
22-Apr-22
depth
not collected
depth_m
3
dna_extracted
TRUE
elevation
0
empo_1
Host-associated
empo_2
Host-associated (saline)
empo_3
Animal (saline)
empo_4
Animal corpus (saline)
env_biome
marine biome
env_feature
animal-associated habitat
env_material
intestine environment
env_package
host-associated
experiment
Unknown
experiment_success
Unknown
experimental
Unknown
extraction_kit
Zymo Tissue Insect 96 (D6017)
forward_barcode
Unknown
forward_primer
Unknown
geo_loc_name
USA:US Virgin Islands:Saint John
geographic location (country and/or sea)
Virgin Islands
gonads_rna
DaG-11
health
Grossly Normal (Healthy)
histopath
NA
host scientific name
Diadema antillarum
host_body_habitat
UBERON:gastrointestinal system
host_body_product
UBERON:lumen of gut
host_body_site
UBERON:digestive tract
host_common_name
sea urchins
host_subject_id
133
host_taxid
105358
id_number
AH3
incubation_water
Unknown
institution
University of Virgin Islands
intestines_rna
DaI-11
investigator_id
Unknown
jurisdiction
US Virgin Islands
latitude
18.332378
loc1
NA
loc10
C
loc11
H
loc12
H
loc13
H
loc14
NA
loc2
H
loc3
H
loc4
NA
loc5
NA
loc6
C
loc7
C
loc8
C
loc9
C
location
Long/Moor Point, St. John
longitude
-64.678601
molecular_micro_diadema_number
11
original_sample_type
intestine
physical_specimen_location
Cornell University
physical_specimen_remaining
FALSE
platepcr_plate
2
platepico_plate
2
platestorage_plate
2
primer_plate
Unknown
project
Unknown
qiita_sample_type
sea urchin gut
reverse_barcode
Unknown
reverse_primer
Unknown
round
Unknown
sample name
qiita_sid_14698:14698.133
sample_date
Unknown
sample_id
DaI.11
sample_type
sea urchin gut
scientific_name
sea urchin metagenome
site_diadema_number
11
spines_rna
DaS-11
tem_feces
STJ AH#14 feces
tem_gut
STJ AH#14 gut
tem_test
STJ AH#14 test
temperature_c
NA
wellpcr_plate
E5
wellpico_plate
E6
wellstorage_plate
E5