wastewater metagenome
collection_date
2022-01-18
geo_loc_name
USA: New Jersey
isolation_source
wastewater
collection_site_id
NJDA_CWW_site_001
ww_population
50000
ww_sample_duration
24
ww_sample_matrix
raw wastewater
ww_sample_type
composite
collection_volume
900 mL
ww_surv_target_1
SARS-CoV-2
ww_surv_target_1_known_present
yes
collected_by
New Jersey State Department of Agriculture
purpose_of_ww_sampling
public health surveillance community-level
ww_sample_site
wastewater treatment plant
sequenced_by
New Jersey State Department of Agriculture
ww_endog_control_1
PMMoV
ww_surv_target_1_gene
Not Performed
ww_surv_target_1_protocol
Not Performed
concentration_method
ceres nanotrap
extraction_control
none
extraction_method
promega ht tna kit
project_name
GenomeTrakr; LFFM ww project
ww_surv_target_1_conc
Not Performed
ww_surv_target_1_conc_unit
Not Performed
purpose_of_ww_sequencing
detection of target organism by RT PCR or ddPCR
ww_population_source
wastewater treatment plant records
specimen_processing
technical replicate
ww_processing_protocol
Ceres Nano: Manual Nanotrap Wastewater Protocol using Promega Maxwell HT Environmental TNA Kit (APP-036 Revision 0 Nov 2021)
specimen_processing_details
raw wastewater had been frozen (-20C) prior to using these conc/ext methods
specimen_processing_id
NJDA_CWW_005_CN
BioSampleModel
SARS-CoV-2: wastewater surveillance