sea urchin metagenome
ENA first public
2025-01-23
INSDC center name
UCSDMI
INSDC status
public
Submitter Id
qiita_sid_14698:14698.262
aboral_surface
#21 (sed and wc)
aluminum_frozen
NA
animal_condition
Unknown
body_wall_rna_sample_1
DaBW21a
body_wall_rna_sample_2
DaBW21b
challenge_category
Unknown
coelomic_fluid_cytology_1
NA
coelomic_fluid_cytology_2
NA
coelomic_fluid_rna
DaCF21-RNA
collection date
2022-04-30
collection_timestamp
2022-04-30
collector
Warham
country
Virgin Islands
culture_time
Unknown
dasc_qpcr_positive
Unknown
date
4/30/2022
depth
not collected
depth_m
NA
dna_extracted
TRUE
elevation
0
empo_1
Host-associated
empo_2
Host-associated (saline)
empo_3
Animal (saline)
empo_4
Animal corpus (saline)
env_biome
marine biome
env_feature
animal-associated habitat
env_material
interstitial fluid material
env_package
host-associated
experiment
Unknown
experiment_success
Unknown
experimental
Unknown
extraction_kit
Zymo Fungal Bacterial 96 (D6006)
forward_barcode
Unknown
forward_primer
Unknown
geo_loc_name
USA:US Virgin Islands:Saint Croix
geographic location (country and/or sea)
Virgin Islands
gonads_rna
DaG-21
health
Healthy
histopath
Da21
host scientific name
Diadema antillarum
host_body_habitat
UBERON:multicellular organism
host_body_product
UBERON:coelomic fluid
host_body_site
UBERON:multicellular organism
host_common_name
sea urchins
host_subject_id
262
host_taxid
105358
id_number
Healthy
incubation_water
Unknown
institution
USVI Department of Planning and Natural Resources
intestines_rna
DaI-21
investigator_id
Unknown
jurisdiction
US Virgin Islands
latitude
17.749772
loc1
NA
loc10
C
loc11
H
loc12
H
loc13
H
loc14
NA
loc2
NA
loc3
NA
loc4
C
loc5
NA
loc6
C
loc7
C
loc8
C
loc9
C
location
Butler Bay, St. Croix
longitude
-64.892372
molecular_micro_diadema_number
21
original_sample_type
coelomic fluid
physical_specimen_location
Cornell University
physical_specimen_remaining
FALSE
platepcr_plate
3
platepico_plate
3
platestorage_plate
3
primer_plate
Unknown
project
Unknown
qiita_sample_type
sea urchin coelomic fluid
reverse_barcode
Unknown
reverse_primer
Unknown
round
Unknown
sample name
qiita_sid_14698:14698.262
sample_date
Unknown
sample_id
DaCF.21
sample_type
sea urchin coelomic fluid
scientific_name
sea urchin metagenome
site_diadema_number
1
spines_rna
DaS-21
tem_feces
STX AH21 feces
tem_gut
STX AH21 gut
tem_test
STX AH21 test
temperature_c
NA
wellpcr_plate
F9
wellpico_plate
F10
wellstorage_plate
F9