b02d026e-530a-4ace-bc4f-fcde94a67a93-asg-MAGScoT_cleanbin_000036
Longimicrobiales bacterium
16S recovered
Yes
16S recovery software
PROKKA (version 1.14.5)
GAL
Nova Southeastern University
GAL_sample_id
NOT PROVIDED
INSDC center name
Tree of Life Programme
MAG coverage software
Minimap2 (version 2.24-r1122)
Submitter Id
b02d026e-530a-4ace-bc4f-fcde94a67a93
assembly quality
Many fragments with little to no review of assembly other than reporting of standard assembly statistics
assembly software
metaMDBG
binning parameters
coverage; graph; hic-mapping
binning software
MAGScoT (version 1.0.0); MetaBat (version 2.15-15-gd6ea400); bin3C (version 0.3.3); MaxBin (version 2.7); MetaTOR
broad-scale environmental context
aquatic biome
collected by
JOSE LOPEZ
collecting institution
NOVA SOUTHEASTERN UNIVERSITY
collection date
2012-05-11
common name
giant barrel sponge
completeness score
83.52
completeness software
checkM (version 1.2.1); checkM_DB (release 2015-01-16)
contamination score
6.59
depth
5.8
environmental medium
adult sponge tissue
geographic location (country and/or sea)
USA
geographic location (latitude)
26.51
geographic location (longitude)
-80.03365
geographic location (region and locality)
Florida|Fort Lauderdale
habitat
Florida reef; Limestone ledge
host life stage
adult
host scientific name
Xestospongia muta
host sex
not collected
host taxid
178552
identified by
JOSE LOPEZ
identifier_affiliation
NOVA SOUTHEASTERN UNIVERSITY
investigation type
metagenome-assembled genome
isolation_source
Sponge: Xestospongia muta
local environmental context
marine reef biome
metagenomic source
sponge metagenome
number of standard tRNAs extracted
52
organism part
WHOLE ORGANISM
project name
ASG
sample derived from
SAMEA114298701
sample name
b02d026e-530a-4ace-bc4f-fcde94a67a93
scientific_name
Longimicrobiales bacterium
sequencing method
Pacbio Sequel II
specimen id
NSU0023301
specimen voucher
11-V-12-1-7H
tRNA extraction software
PROKKA (version 1.14.5)
taxonomic classification
GTDB-TK (version 2.1.1); GTDB (release 207_v2)
taxonomic identity marker
taxonomic novelty determined using RED
tolid
odXesMuta1.Longimicrobiales_3