Potter Cove sediment slurry SIP incubation - 13C Acetate.Lepidocrocite at 2 degrees C - RNA Ultra-light fraction
marine sediment metagenome
ENA first public
2024-11-11
INSDC center name
UniBremen
INSDC status
public
Submitter Id
2degrees.13C.Acetate.Lepidocrocite.Fraction.Ultra-light
broad-scale environmental context
shallow marine sediment [ENVO:03000034] | polar biom [ENVO:01000339] | glacial retreat [ENVO:01001656] | coast [ENVO:01000687]
chem_administration
acetate, lepidocrocite
collection date
2019-01-23
depth
0 - 0.29
elevation
-15
environmental medium
microbial community [PCO:1000004] | mesocosm [ENVO:01000620]
experimental factor
different substrate additions | RNA stable isotope probing | exposure temperature [EFO:0000718] | response to heat [GO:0009408] | labelling [EFO:0000562]
geographic location (country and/or sea)
Antarctica
geographic location (latitude)
-62.2253889
geographic location (longitude)
-58.6411667
geographic location (region and locality)
King George Island/Isla 25 de Mayo, Potter Cove
gradient_pos_density
1.78
gradient_pos_rel_amt
0.1989
gradient_position
5
internal_standard
10.1007/978-1-4939-9721-3_15
isotope
13C
isotopolog
175
isotopolog_approach
single
isotopolog_atom_frac
0.99
isotopolog_atom_pos
1S/C2H4O2.Na/c1-2(3)4;/h1H3,(H,3,4);/q;+1/p-1/i1+1,2+1;
isotopolog_dose
30.026
isotopolog_incu_time
T240:00
isotopolog_label
isotopically labelled
local environmental context
anaerobic sediment [ENVO:00002045]
original_fraction
11+12/14
project name
Bacterial 16S rRNA community in acetate degrading stable isotope probing slurry incubation experiment across temperature range with sediment of Potter Cove
relationship to oxygen
anaerobe
sample name
2degrees.13C.Acetate.Lepidocrocite.Fraction.Ultra-light
scientific_name
marine sediment metagenome
sip_method
10.1007/978-1-4939-9721-3_15
source_mat_alias
tempSIP_1
source_mat_id
ERS22115408