EMOBON_NRMCB_So_10
metagenome
INSDC center name
European Marine Biological Resource Centre
Submitter Id
EMOBON00099
broad-scale environmental context
Control
collection date
2021-08-31
depth
0
elevation
0
environmental medium
swab
geographic location (country and/or sea)
missing: control sample
geographic location (latitude)
missing: control sample
geographic location (locality)
missing: control sample
geographic location (longitude)
missing: control sample
geographic location (ocean)
missing: control sample
geographic location (region and locality)
missing: control sample
library reads sequenced
43917269
local environmental context
Negative
mock_pr
DDC_AAAAOSDA_1_HMNJKDSX3.UDI201
nucleic acid amplification
metag
nucleic acid extraction
https://www.qiagen.com/us/products/discovery-and-translational-research/dna-rna-purification/dna-purification/microbial-dna/dneasy-powersoil-pro-kit?catno=47016
obs_id
NRMCB
pcr conditions
DNA Polymerase:taq Q5;NoPCRs:2;PCRvolume:2;Nocycles:18
pcr primers
metag
project name
EMOBON
relevant standard operating procedures
Prod_ILL_BqADN_NEBUII_151_v4; Bq NEB Next Ultra II
sample name
EMOBON00099
sample storage location
freezer #1 BEOM; upper compartment; rack #8 d III (see scheme in technical support EMI)
sample storage temperature
-80
scientific_name
metagenome
sequence quality check
manual
sequence_batch
Batch1
sequence_batch_rundate
Batch1_220712
sequencing method
Illumina NovaSeq 6000
source material identifiers
EMOBON_NRMCB_So_210831_micro_blank
status
blank
target gene
metag
target subfragment
metag
tidal stage information
no_tide
total depth of water column
75