Escherichia coli
strain
LACPHL-BACT-2023-00156
host
Homo sapiens
isolation source
urine
collection date
2023-10-05
geographic location
USA: California, Los Angeles County
sample type
whole organism
MLST
ST410
PubMLST scheme
ecoli_achtman_4
AMRFinderPlus AMR core genes
ftsI_N337NYRIN,parC_S80I,parE_S458A,pmrB_Y358N,gyrA_D87N,gyrA_S83L,blaCMY-2,glpT_E448K,blaNDM-5,ble,sul1,aadA2,dfrA12,tet(A),aph(6)-Id,aph(3'')-Ib,sul2,qnrS1,floR,mph(A),tet(M),blaCTX-M-55,blaTEM,aph(3')-IIa,ble,rmtB1
AMRFinderPlus AMR subclasses
AMINOGLYCOSIDE,AZTREONAM,BETA-LACTAM,BLEOMYCIN,CARBAPENEM,CEPHALOSPORIN,CHLORAMPHENICOL/FLORFENICOL,COLISTIN,EFFLUX,FOSFOMYCIN,KANAMYCIN,MACROLIDE,QUINOLONE,STREPTOMYCIN,SULFONAMIDE,TETRACYCLINE,TRIMETHOPRIM
AMRFinderPlus DB version
2023-04-17.1
BioSampleModel
Microbe, viral or environmental