Metagenome-assembled genome: SRR5720304_concoct_60
uncultured bacterium
ENA first public
2024-02-06
INSDC center name
EMG
INSDC status
public
Submitter Id
SRR5720304_concoct_60
assembly quality
Many fragments with little to no review of assembly other than reporting of standard assembly statistics
assembly software
metaspades_v3.15.3
binning parameters
default
binning software
MGnify-genomes-generation-pipeline_v1.0.0
broad-scale environmental context
aqua
broker name
EBI-EMG
collection date
2004-04-20
completeness score
62.59
completeness software
CheckM2_v1.0.1
contamination score
3.02
environmental medium
ocean
geographic location (country and/or sea)
Pacific Ocean
geographic location (latitude)
22.75
geographic location (longitude)
-158.0
investigation type
metagenome-assembled genome
isolation_source
marine metagenome
local environmental context
water
metagenomic source
marine metagenome
project name
Temporal sampling of marine metagenomes from Station ALOHA and BATS
sample derived from
SAMN07137003
sample name
SRR5720304_concoct_60
scientific_name
uncultured bacterium
sequencing method
NextSeq 550
taxonomic identity marker
multi-marker approach