Metagenome-assembled genome: ERR3589570_concoct_83
uncultured euryarchaeote
ENA first public
2024-02-06
INSDC center name
EMG
INSDC status
public
Submitter Id
ERR3589570_concoct_83
assembly quality
Many fragments with little to no review of assembly other than reporting of standard assembly statistics
assembly software
metaspades_v3.15.3
binning parameters
default
binning software
MGnify-genomes-generation-pipeline_v1.0.0
broad-scale environmental context
water
broker name
EBI-EMG
collection date
not provided
completeness score
75.02
completeness software
CheckM2_v1.0.1
contamination score
0.6
environmental medium
tara
geographic location (country and/or sea)
not provided
geographic location (latitude)
78.0391
geographic location (longitude)
116.4105
investigation type
metagenome-assembled genome
isolation_source
marine metagenome
local environmental context
marine
metagenomic source
marine metagenome
project name
Analysis of the genes and genomes present in Tara Oceans Polar Circle prokaryote size fractions through shotgun DNA sequencing. Seawater was filtered from different depths to retain small cell sizes (Bacteria Organisms). The DNA was extracted and submitted to high throughput sequencing.
sample derived from
SAMEA4397730
sample name
ERR3589570_concoct_83
scientific_name
uncultured euryarchaeote
sequencing method
Illumina HiSeq 2000
taxonomic identity marker
multi-marker approach