Jr-11may16-95
Comamonadaceae bacterium
Jr-11may16-95
ENA-FIRST-PUBLIC
2022-11-29
ENA-LAST-UPDATE
2022-11-29
External Id
SAMEA112172550
INSDC center alias
BIOLOGY CENTRE ASCR, V.V.I., INSTITUTE OF HYDROBIO
INSDC center name
BIOLOGY CENTRE ASCR, V.V.I., INSTITUTE OF HYDROBIO
INSDC first public
2022-11-29T20:21:16Z
INSDC last update
2022-11-29T20:21:16Z
INSDC status
public
Submitter Id
Jr-11may16-95
assembly quality
Multiple fragments where gaps span repetitive regions. Presence of the 23S, 16S, and 5S rRNA genes and at least 18 tRNAs
assembly software
MEGAHIT
binning parameters
coverage and kmer
binning software
MetaBAT2
broad-scale environmental context
freshwater ecosystem
collection date
2016-05-11
completeness score
79.9
completeness software
checkm
contamination score
2.76
environmental medium
freshwater lake biome
geographic location (country and/or sea)
Czech Republic
geographic location (latitude)
48.6189
geographic location (longitude)
14.6731
isolation_source
lake water
local environmental context
freshwater lake biome
metagenomic source
lake water metagenome
project name
PRJEB35770
sample derived from
ERS4146252
sample name
Jr-11may16-95
taxonomic identity marker
multi-marker approach