07C-BC-St04_bin.23.orig
uncultured Gammaproteobacteria bacterium
Metagenome-assembled genome from uncultured Gammaproteobacteria bacterium
ENA first public
2024-07-04
INSDC center name
KOPRI
INSDC status
public
Submitter Id
07C-BC-St04_bin.23.orig
assembly quality
Multiple fragments where gaps span repetitive regions. Presence of the 23S, 16S, and 5S rRNA genes and at least 18 tRNAs
assembly software
MEGAHIT (v1.2.9)
binning parameters
completeness > 70%, contamination > 10%
binning software
MaxBin2 (v2.2.6), MetaBAT2 (v2.12.1), CONCOCT (v1.0.0)
broad-scale environmental context
polar environment [ENVO:01001703]
collection date
2016-09-03
completeness score
97.97
completeness software
CheckM (v1.2.2)
contamination score
0.34
environmental medium
marine sediment [ENVO:03000033]
geographic location (country and/or sea)
Arctic Ocean
geographic location (latitude)
75.4231
geographic location (longitude)
171.4932
isolation_source
marine sediment
local environmental context
seafloor [ENVO:00000482]
metagenomic source
marine sediment metagenome
project name
Marine sediment microbiomes in East Siberian Sea
sample derived from
ERS20273658
sample name
07C-BC-St04_bin.23.orig
scientific_name
uncultured Gammaproteobacteria bacterium
taxonomic identity marker
multi marker approach