10C-St20-MC-01_bin.25.orig
uncultured Granulosicoccus sp.
Metagenome-assembled genome from uncultured Granulosicoccus sp.
ENA first public
2024-07-04
INSDC center name
KOPRI
INSDC status
public
Submitter Id
10C-St20-MC-01_bin.25.orig
assembly quality
Multiple fragments where gaps span repetitive regions. Presence of the 23S, 16S, and 5S rRNA genes and at least 18 tRNAs
assembly software
MEGAHIT (v1.2.9)
binning parameters
completeness > 70%, contamination > 10%
binning software
MaxBin2 (v2.2.6), MetaBAT2 (v2.12.1), CONCOCT (v1.0.0)
broad-scale environmental context
polar environment [ENVO:01001703]
collection date
2019-09-13
completeness score
95.87
completeness software
CheckM (v1.2.2)
contamination score
1.15
environmental medium
marine sediment [ENVO:03000033]
geographic location (country and/or sea)
Arctic Ocean
geographic location (latitude)
74.4674
geographic location (longitude)
167.9195
isolation_source
marine sediment
local environmental context
seafloor [ENVO:00000482]
metagenomic source
marine sediment metagenome
project name
Marine sediment microbiomes in East Siberian Sea
sample derived from
ERS20273662
sample name
10C-St20-MC-01_bin.25.orig
scientific_name
uncultured Granulosicoccus sp.
taxonomic identity marker
multi marker approach