envS058
sediment metagenome
Vial number envS058 of sediment sample from Tel Shikmona-Israel collected from Rubbles at 0.5 m depth
ENA first public
2024-12-15
INSDC center name
MARUM - Center for Marine Environmental Sciences
INSDC status
public
Submitter Id
153191:62ef9ee7-1d76-48cd-904e-963aec203491
broad-scale environmental context
marine biome [ENVO:00000447]
broker name
GFBIO
collection date
2019-10-23
depth
0.5
depth category
Shallow
dna_concentration
2.85
elevation
-0.5
environmental medium
coral reef [ENVO:00000150] | pebble sediment [ENVO:01000116]
environmental package
sediment
experiment_id
envS058_PCR_1
geographic location (country and/or sea)
Israel
geographic location (latitude)
32.825833
geographic location (longitude)
34.954833
geographic location (region and locality)
Tel Shikmona
investigation type
mimarks-survey
library_number
15
local environmental context
shallow marine sediment [ENVO:03000034]
multiplex_identifier_forward
TGTCTGAG
multiplex_identifier_reverse
GTATCACA
n_cycles_pcr
32
pcr primers
FWD:CCTACGGGNGGCWGCAG;REV:GACTACHVGGGTATCTAATCC
pcr_batch_number
PCR-S131
pcr_replicate
envS058_1
project name
ForaInva
purified pcr product voucher id
PR-1233
run_information
R1 file contains forward reads - sequences were generated in mixed orientation, separate read files submitted for each orientation
sample name
153191:62ef9ee7-1d76-48cd-904e-963aec203491
sample_description
Vial number envS058 of sediment sample from Tel Shikmona-Israel collected from Rubbles at 0.5 m depth
scientific_name
sediment metagenome
sediment environmental package
sediment
sequencing method
Illumina MiSeq
submitted to insdc
true
substrate_type
Rubbles
target subfragment
V3-V4
total depth of water column
0.5