BV-27-C-c
marine metagenome
Coastal metagenome taken 100m from Potamegaton meadow (5cm from the plant, 20 cm above the sediment)
sample_description
Coastal metagenome taken 100m from Potamegaton meadow (5cm from the plant, 20 cm above the sediment)
broad-scale environmental context
temperate marginal sea biome [ENVO:01000856]
collection date
2021-07-31
geographic location (longitude)
13.726
run
L01
water environmental package
water
sample material processing
filtered over 0.22 micrometer filters and shockfrozen
experiment
Lib_1
nucleic acid extraction
PowerSoil DNA isolation - DNeasy PowerSoil Pro Kit
geographic location (country and/or sea)
Germany
submitted to insdc
true
organism
marine metagenome
environmental package
water
environmental_sample
yes
environmental medium
brackish water [ENVO:00002019]
geographic location (latitude)
54.14366667
scientific_name
marine metagenome
target subfragment
V3-V4
geographic location (region and locality)
Pomeranian Bay
investigation type
mimarks-survey
total depth of water column
1.7
pcr primers
FWD:CCTACGGGNGGCWGCAG REV:GACTACHVGGGTATCTAATCC
local environmental context
microbial community [PCO:1000004]
depth
1.7
project name
16S and 18S rRNA amplicon sequencing of coastal microbial communities across the salinity gradient of the Baltic Sea in pelagic, benthic, and biofilm environments
sequencing method
Illumina MiSeq
ENA-LAST-UPDATE
2023-11-06