S0445
marine eukaryotic metagenome
Specimen S0445 of single cell foraminifera from Eilat-Israel collected from Rubbles at 1 m depth
ENA first public
2024-12-15
INSDC center name
MARUM - Center for Marine Environmental Sciences
INSDC status
public
Submitter Id
153198:62ef9ee7-1d76-48cd-904e-963aec203491
broad-scale environmental context
marine biome [ENVO:00000447]
broker name
GFBIO
collection date
2019-10-27
depth
1
depth category
Shallow
dna_concentration
5.75
environmental medium
coral reef [ENVO:00000150] | pebble sediment [ENVO:01000116]
environmental package
host associated
experiment_id
S0445_PCR_1
geographic location (country and/or sea)
Israel
geographic location (latitude)
29.502028
geographic location (longitude)
34.917722
geographic location (region and locality)
Eilat
host associated environmental package
host associated
host taxid
1929295.0
investigation type
mimarks-specimen
library_number
9
local environmental context
microbial community [PCO:1000004] | environmental system determined by an organism [ENVO:01001000]
multiplex_identifier_forward
GTAGTGAC
multiplex_identifier_reverse
ACTCTACG
n_cycles_pcr
32
pcr primers
FWD:CCTACGGGNGGCWGCAG;REV:GACTACHVGGGTATCTAATCC
pcr_batch_number
PCR-S077
pcr_replicate
S0445_1
project name
ForaInva
purified pcr product voucher id
PR-0587
run_information
R1 file contains forward reads - sequences were generated in mixed orientation, separate read files submitted for each orientation
sample name
153198:62ef9ee7-1d76-48cd-904e-963aec203491
sample_description
Specimen S0445 of single cell foraminifera from Eilat-Israel collected from Rubbles at 1 m depth
scientific_name
marine eukaryotic metagenome
sequencing method
Illumina MiSeq
submitted to insdc
true
substrate_type
Rubbles
target subfragment
V3-V4
total depth of water column
1.0