envS014
sediment metagenome
Vial number envS014 of sediment sample from Plemmirio-Italy collected from Algae at 4 m depth
ENA first public
2024-12-15
INSDC center name
MARUM - Center for Marine Environmental Sciences
INSDC status
public
Submitter Id
153163:62ef9ee7-1d76-48cd-904e-963aec203491
broad-scale environmental context
marine biome [ENVO:00000447]
broker name
GFBIO
collection date
2019-09-20
depth
4
depth category
Deep
dna_concentration
2.465
elevation
-4.0
environmental medium
coral reef [ENVO:00000150] | algal material [ENVO:01001189]
environmental package
sediment
experiment_id
envS014_PCR_1
geographic location (country and/or sea)
Italy
geographic location (latitude)
37.039639
geographic location (longitude)
15.30675
geographic location (region and locality)
Plemmirio
investigation type
mimarks-survey
library_number
15
local environmental context
shallow marine sediment [ENVO:03000034]
multiplex_identifier_forward
AGAGCTAG
multiplex_identifier_reverse
AGATCGCG
n_cycles_pcr
32
pcr primers
FWD:CCTACGGGNGGCWGCAG;REV:GACTACHVGGGTATCTAATCC
pcr_batch_number
PCR-S135
pcr_replicate
envS014_1
project name
ForaInva
purified pcr product voucher id
PR-1251
run_information
R1 file contains forward reads - sequences were generated in mixed orientation, separate read files submitted for each orientation
sample name
153163:62ef9ee7-1d76-48cd-904e-963aec203491
sample_description
Vial number envS014 of sediment sample from Plemmirio-Italy collected from Algae at 4 m depth
scientific_name
sediment metagenome
sediment environmental package
sediment
sequencing method
Illumina MiSeq
submitted to insdc
true
substrate_type
Algae
target subfragment
V3-V4
total depth of water column
4.0