envS016
sediment metagenome
Vial number envS016 of sediment sample from Tel Shikmona-Israel collected from Algae at 1.5 m depth
ENA first public
2024-12-15
INSDC center name
MARUM - Center for Marine Environmental Sciences
INSDC status
public
Submitter Id
153165:62ef9ee7-1d76-48cd-904e-963aec203491
broad-scale environmental context
marine biome [ENVO:00000447]
broker name
GFBIO
collection date
2019-10-23
depth
1.5
depth category
Deep
dna_concentration
3.05
elevation
-1.5
environmental medium
coral reef [ENVO:00000150] | algal material [ENVO:01001189]
environmental package
sediment
experiment_id
envS016_PCR_1
geographic location (country and/or sea)
Israel
geographic location (latitude)
32.825833
geographic location (longitude)
34.954833
geographic location (region and locality)
Tel Shikmona
investigation type
mimarks-survey
library_number
15
local environmental context
shallow marine sediment [ENVO:03000034]
multiplex_identifier_forward
ATACTCTC
multiplex_identifier_reverse
CGTCAGCG
n_cycles_pcr
32
pcr primers
FWD:CCTACGGGNGGCWGCAG;REV:GACTACHVGGGTATCTAATCC
pcr_batch_number
PCR-S129
pcr_replicate
envS016_1
project name
ForaInva
purified pcr product voucher id
PR-1204
run_information
R1 file contains forward reads - sequences were generated in mixed orientation, separate read files submitted for each orientation
sample name
153165:62ef9ee7-1d76-48cd-904e-963aec203491
sample_description
Vial number envS016 of sediment sample from Tel Shikmona-Israel collected from Algae at 1.5 m depth
scientific_name
sediment metagenome
sediment environmental package
sediment
sequencing method
Illumina MiSeq
submitted to insdc
true
substrate_type
Algae
target subfragment
V3-V4
total depth of water column
1.5