597c4156-66fb-46ee-a67f-097f1797689d-asg-bin.43
Mycoplasmatales bacterium
original collection date
2022-01-08
assembly software
metaMDBG
habitat
Marine Lake
host scientific name
Aurelia sp. 4 Dawson et al 2005
original collection location
Palau | Koror | Ongeim'l Tketau
sample derived from
SAMEA115466159
geographic location (longitude)
134.38
number of standard tRNAs extracted
31
host sex
not collected
specimen_id
UCALI0000022
identified_by
Michael Dawson
completeness software
checkM (version 1.2.1); checkM_DB (release 2015-01-16)
binning software
DASTOOL (version 1.1.5); MetaBat (version 2.15-15-gd6ea400); bin3C (version 0.3.3); MaxBin (version 2.7); MetaTOR
organism
Mycoplasmatales bacterium
host taxid
2790877
scientific_name
Mycoplasmatales bacterium
geographic location (region and locality)
Koror | Ongeim'l Tketau
host life stage
adult
investigation type
metagenome-assembled genome
GAL
University of California
MAG coverage software
Minimap2 (version 2.24-r1122)
metagenomic source
jellyfish metagenome
project name
ASG
sequencing method
Pacbio Sequel II
16s recovered
Yes
tolid
jsAurSpec1.Mycoplasmatales_1
broad-scale environmental context
aquatic biome
collection date
2022-01-08
binning parameters
coverage; graph; hic-mapping
contamination score
2.26
collected_by
Michael Dawson
tRNA extraction software
PROKKA (version 1.14.5)
original geographic location (longitude)
134.3764
taxonomic classification
GTDB-TK (version 2.3.2); GTDB (release 214)
16S recovery software
PROKKA (version 1.14.5)
geographic location (country and/or sea)
Palau
assembly quality
Single contiguous sequence without gaps or ambiguities with a consensus error rate equivalent to Q50 or better
taxonomic identity marker
taxonomic classification defined by topology and ANI
completeness score
72.68
environmental medium
adult jellyfish tissue
geographic location (latitude)
7.16
organism part
WHOLE ORGANISM
sample collection method
by hand
GAL_sample_id
NOT PROVIDED
identifier_affiliation
UC Merced
original geographic location (latitude)
7.161
specimen_voucher
NOT_APPLICABLE
local environmental context
marine biome
depth
1.5
barcoding center
UNIVERSITY OF CALIFORNIA
collecting institution
UC Merced
isolation_source
Jellyfish: Aurelia sp. 4 Dawson et al 2005