Metagenome-assembled genome: ERR598945_maxbin2_4
uncultured Cryomorphaceae bacterium
This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run ERR598945 of study ERP001736.
ENA first public
2024-03-17
INSDC center name
EMG
INSDC status
public
Submitter Id
ERR598945_maxbin2_4
assembly quality
Multiple fragments where gaps span repetitive regions. Presence of the 23S, 16S, and 5S rRNA genes and at least 18 tRNAs
assembly software
metaspades_v3.10.1
binning parameters
default
binning software
MGnify-genomes-generation-pipeline_v1.0.0
broad-scale environmental context
water
broker name
EBI-EMG
collection date
not provided
completeness score
100
completeness software
CheckM2_v1.0.1
contamination score
0.34
environmental medium
tara
geographic location (country and/or sea)
not provided
geographic location (latitude)
-60.22870000
geographic location (longitude)
-60.64760000
investigation type
metagenome-assembled genome
isolation_source
marine metagenome
local environmental context
ocean
metagenomic source
marine metagenome
project name
Seawater was filtered from different depths to retain small cell sizes (Bacteria Organisms). The DNA was extracted and submitted to high throughput sequencing.
sample derived from
SAMEA2621487
sample name
ERR598945_maxbin2_4
scientific_name
uncultured Cryomorphaceae bacterium
sequencing method
Illumina HiSeq 2000
taxonomic identity marker
multi-marker approach