Salmo salar
Salmon host genomic data from Distal gut content; animal SA11.24 from tank SA11 with treatment Tiger
ENA-FIRST-PUBLIC
2023-03-22
ENA-LAST-UPDATE
2023-03-22
External Id
SAMEA9068822
INSDC center alias
UNIVERSITY OF COPENHAGEN
INSDC center name
UNIVERSITY OF COPENHAGEN
INSDC first public
2023-03-22T12:21:42Z
INSDC last update
2023-03-22T12:21:42Z
INSDC status
public
Submitter Id
SA11_24C1a_hostG
adapters
AAGTCGGAGGCCAAGCGGTCTTAGGAAGACAA;GAACGACATGGCTACGATCCGACTT
collection date
2019-08-12
common name
Atlantic salmon
geographic location (country and/or sea)
Norway
geographic location (latitude)
66.079905
geographic location (longitude)
12.587848
geographic location (region and locality)
Dønna; Nordland county
host body site
Distal gut content
host common name
Atlantic salmon
host diet
Fermented algae meal (added in in oil coating)
host diet treatment
Tiger: SA Control
host diet treatment concentration
0
host disease status
Wounded:-
host gutted mass
444.6
host length
33.5
host scientific name
Salmo salar
host storage container
LetSea Tank: Tiger
host storage container pH
7.05
host storage container temperature
12.76
host subject id
SA11.24
host taxid
8030
host total mass
510.8
library name
BEST
library selection
PCR
nucleic acid extraction
D-rex protocol
project name
HoloFood Salmon - Host Genome
reference host genome for decontamination
GCA_000000000.0
sample name
SA11_24C1a_hostG
sample storage buffer
Shield
sample storage container
2ml E-matrix
sample storage location
UCPH
sample storage temperature
-20
sample volume or weight for DNA extraction
0.2
scientific_name
Salmo salar
sequencing method
MGISEQ-2000
trial timepoint
60