wastewater metagenome
collection_date
2023-03-15
collection_time
Not Collected
geo_loc_name
USA: Washington
isolation_source
wastewater
collection_site_id
WA0044962
project_name
CDC NWSS
collected_by
Washington State Department of Health
purpose_of_ww_sampling
public health surveillance community-level
ww_sample_site
wastewater treatment plant
ww_flow
5.358
instantaneous_flow
See ww_flow
ww_population
73000
ww_sample_matrix
raw wastewater
ww_sample_type
composite
collection_volume
50 mL
ww_sample_duration
Not Collected
ww_temperature
5.4
ww_ph
7.64
ww_industrial_effluent_percent
9
ww_total_suspended_solids
455
ww_pre_treatment
No
concentration_method
Ceres Nanotrap
extraction_method
MagMAX Viral/Pathogen Nucleic Acid Isolation Kit
extraction_control
OC43 Recovery Control
ww_surv_target_1
SARS-CoV-2
ww_surv_target_1_known_present
yes
ww_surv_target_1_protocol
ddPCR detection of SARS-CoV-2 using the BioRad PREvalence Kit on the BioRad QXOne
ww_surv_target_1_conc
8945812
ww_surv_target_1_conc_unit
Copies/L
ww_surv_target_1_gene
N gene (N1)
ww_surv_target_2
SARS-CoV-2
ww_surv_target_2_conc
7967988
ww_surv_target_2_conc_unit
Copies/L
ww_surv_target_2_gene
N gene (N2)
ww_surv_target_2_known_present
yes
purpose_of_ww_sequencing
Community Surveillance
sequenced_by
Washington State Department of Health
ww_surv_system_sample_id
230305
BioSampleModel
SARS-CoV-2: wastewater surveillance