bacterium
This sample represents a Metagenome-assembled genome assembled from the metagenomic run SRR5574505 of study SRP107170.
assembly software
metaSPAdes
broad-scale environmental context
mouse digestive system
collection date
2016-01-25
sample derived from
SAMN07138964
geographic location (longitude)
118.78
binning parameters
default
contamination score
6.49
ENA-FIRST-PUBLIC
2023-03-06T04:22:14Z
ENA-LAST-UPDATE
2023-03-06T04:22:14Z
completeness software
CheckM
geographic location (country and/or sea)
China
binning software
metabat2
organism
unclassified eubacterium
assembly quality
Many fragments with little to no review of assembly other than reporting of standard assembly statistics
taxonomic identity marker
multi-marker approach
completeness score
73.34
environmental medium
feces
geographic location (latitude)
32.1
scientific_name
unclassified eubacterium
common name
investigation type
metagenome-assembled genome
local environmental context
mouse gut
metagenomic source
mouse gut metagenome
project name
mouse gut metagenome Raw sequence reads
sequencing method
Illumina HiSeq 2500
isolation_source
mouse gut metagenome
ENA-FIRST-PUBLIC
2023-03-06
ENA-LAST-UPDATE
2023-03-06