Cf1
hypersaline lake metagenome
ENA-FIRST-PUBLIC
2023-05-24
ENA-LAST-UPDATE
2023-05-24
External Id
SAMEA113473821
INSDC center alias
AZTI
INSDC center name
AZTI
INSDC first public
2023-05-24T12:25:14Z
INSDC last update
2023-05-24T12:25:14Z
INSDC status
public
Submitter Id
TfA_Bin3_1
assembly quality
Many fragments with little to no review of assembly other than reporting of standard assembly statistics
assembly software
IDBA v1.1.3
binning parameters
Default
binning software
MaxBin v2.2.7
broad-scale environmental context
laboratory environment
collection date
2016-06-07
completeness score
45.3
completeness software
MiGA
contamination score
1.9
environmental medium
Brine
geographic location (country and/or sea)
Spain
geographic location (latitude)
39,3501
geographic location (longitude)
3,013
isolation_source
mesocosm brine metagenome
local environmental context
mesocosm
metagenomic source
hypersaline lake metagenome
project name
Brine and viral community exchange in hypersaline systems
sample derived from
ERS14773491
sample name
TfA_Bin3_1
scientific_name
hypersaline lake metagenome
taxonomic identity marker
ANI