CDC Sars CoV2 Sequencing Baseline Constellation
Severe acute respiratory syndrome coronavirus 2
Isolate
SARS-CoV-2/Human/USA/CA-CDC-STM-WFD5YR959/2022
collected_by
'Helix'
collection_date
2022-11-21
isolation_source
nasal swab
geo_loc_name
USA: California
host
Homo sapiens
host_disease
COVID-19
host_sex
female
host_age
29
host_race
White
collection_device
Nasal swab
collection_method
Nasal swab
purpose_of_sequencing
baseline surveillance (random sampling)
diagnostic_gene_name_1
N
diagnostic_pcr_protocol_1
Helix COVID-19 and Flu Test
diagnostic_pcr_Ct_value_1
Unknown
diagnostic_gene_name_2
ORF1ab
diagnostic_pcr_protocol_2
Helix COVID-19 and Flu Test
diagnostic_pcr_Ct_value_2
Unknown
diagnostic_gene_name_3
S
diagnostic_pcr_protocol_3
Helix COVID-19 and Flu Test
diagnostic_pcr_Ct_value_3
Unknown
lineage/clade name
BQ.1
BioSampleModel
SARS-CoV-2: clinical or host-associated