bgp35_bin_081
uncultured Capillibacterium sp.
ENA-FIRST-PUBLIC
2023-05-22
ENA-LAST-UPDATE
2023-05-22
External Id
SAMEA113533554
INSDC center alias
CEBITEC
INSDC center name
Center for Biotechnology, Bielefeld University
INSDC first public
2023-05-22T12:17:02Z
INSDC last update
2023-05-22T12:17:02Z
INSDC status
public
Submitter Id
bgp35_bin_081
assembly quality
Many fragments with little to no review of assembly other than reporting of standard assembly statistics
assembly software
MEGAHIT
binning parameters
default
binning software
MetaBAT 2
broad-scale environmental context
anaerobic digestion
collection date
2017-02
completeness score
88.56
completeness software
CheckM
contamination score
4.66
environmental medium
feedstock (maize silage, grass silage, manure, cereal, potato peels)
geographic location (country and/or sea)
Germany
geographic location (latitude)
48.1351
geographic location (longitude)
11.5820
investigation type
metagenome-assembled genome
isolation_source
biogas plant anaerobic digester
local environmental context
thermophilic biogas digester
metagenomic source
biogas fermenter metagenome
project name
Taxonomic, functional and ecological inventory of 67 full-scale biogas digesters
sample derived from
ERS15412147,ERS15412148,ERS15412149,ERS15412150,ERS15412151,ERS15412152,ERS15412153,ERS15412154,ERS15412155
sample name
bgp35_bin_081
scientific_name
uncultured Capillibacterium sp.
sequencing method
Illumina HiSeq 1500