CDC Sars CoV2 Sequencing Baseline Constellation
Severe acute respiratory syndrome coronavirus 2
Isolate
SARS-CoV-2/Human/USA/NM-CDC-LC0947220/2022
collected_by
Laboratory Corporation of America
collection_date
2022-11-28
isolation_source
Nasal Swabs
geo_loc_name
USA: New Mexico
host
Homo sapiens
host_disease
COVID-19
host_sex
male
host_age
14
host_race
Unknown
collection_device
Nasal Swabs
collection_method
Nasal Swabs
purpose_of_sequencing
baseline surveillance (random sampling)
diagnostic_gene_name_1
N1 gene
diagnostic_pcr_protocol_1
Labcorp LDT
diagnostic_pcr_Ct_value_1
24.001
diagnostic_gene_name_2
N2 gene
diagnostic_pcr_protocol_2
Labcorp LDT
diagnostic_pcr_Ct_value_2
21.203
diagnostic_gene_name_3
RP gene
diagnostic_pcr_protocol_3
Labcorp LDT
diagnostic_pcr_Ct_value_3
28.460
lineage/clade name
BQ.1.12
BioSampleModel
SARS-CoV-2: clinical or host-associated