binned metagenome: spire_mag_02970599
Bacteroides uniformis
ENA first public
2024-09-20
INSDC center name
EMBL Heidelberg
INSDC status
public
Submitter Id
spire_mag_02970599
assembly quality
Many fragments with little to no review of assembly other than reporting of standard assembly statistics
assembly software
megahit 1.2.9
binning parameters
default
binning software
metabat 2.12.1
broad-scale environmental context
human digestive system
broker name
EBI-EMG
collection date
missing: third party data
completeness score
77.0
completeness software
checkm2 0.1.3
contamination score
0.42
environmental medium
stool
geographic location (country and/or sea)
not provided
geographic location (latitude)
missing: third party data
geographic location (longitude)
missing: third party data
investigation type
metagenome-assembled genome
isolation_source
human gut metagenome
local environmental context
human gut
metagenomic source
human gut metagenome
project name
The human microbiome is an integral component of our body and a co-determinant of several health conditions. However, how the human microbiome is shaped via person-to-person microbial transmission and the extent to which interpersonal relations impact the individual genetic makeup of the microbiome and its spread within and across populations remain largely unknown. We assessed this in >9700 gut and oral metagenomes.
sample derived from
SAMEA10739543
sample name
spire_mag_02970599
scientific_name
Bacteroides uniformis
sequencing method
unspecified
taxonomic identity marker
multi-marker approach