human metagenome
study_ID_mom
10012U
host
Homo sapiens
geographic location
USA
collection date
2021
city
Lancaster
state
MA
latitude and longitude
42.45604829 N 71.66833260 W
calpro_ng_mg
45.24
vaginalsubCST
III-A
vaginalCST
III
Sequencing_Run
X
CD_UC_HC_diagnosis.x
UC
IBD_group.x
IBD
Total_Grams
3175
Energy
2134
Total_Fat
83
Total_Carbohydrate
289
Total_Protein
68
Animal_Protein
42
Vegetable_Protein
26
Alcohol
0
Cholesterol
209
Total_Saturated_Fatty_Acids_SFA_
26
Total_Monounsaturated_Fatty_Acids_MUFA_
30
Total_Polyunsaturated_Fatty_Acids_PUFA_
19
Fructose
16
Galactose
1
Glucose
21
Lactose
10
Maltose
9
Sucrose
82
Starch
108
Total_Dietary_Fiber
21
Soluble_Dietary_Fiber
8
Insoluble_Dietary_Fiber
13
Pectins
4
Total_Vitamin_A_Activity_International_Units_
3587
Beta_Carotene_Equivalents_derived_from_provitamin_A_carotenoids_
1348
Retinol
403
Vitamin_D_calciferol_
2
Total_Alpha_Tocopherol_Equivalents
12
Vitamin_E_Total_Alpha_Tocopherol_
9
Beta_Tocopherol
1
Gamma_Tocopherol
15
Delta_Tocopherol
4
Vitamin_K_phylloquinone_
73
Vitamin_C_ascorbic_acid_
156
Thiamin_vitamin_B1_
2
Riboflavin_vitamin_B2_
2
Niacin_vitamin_B3_
24
Pantothenic_Acid
6
Vitamin_B_6_pyridoxine_pyridoxyl_._pyridoxamine_
2
Total_Folate
417
Vitamin_B_12_cobalamin_
3
Calcium
953
Phosphorus
1111
Magnesium
233
Iron
11
Zinc
7
Copper
1
Selenium
94
Sodium
2744
Potassium
2261
SFA_4_0_butyric_acid_
1
SFA_6_0_caproic_acid_
0
SFA_8_0_caprylic_acid_
0
SFA_10_0_capric_acid_
0
SFA_12_0_lauric_acid_
1
SFA_14_0_myristic_acid_
2
SFA_16_0_palmitic_acid_
14
SFA_17_0_margaric_acid_
0
SFA_18_0_stearic_acid_
7
SFA_20_0_arachidic_acid_
0
SFA_22_0_behenic_acid_
0
MUFA_14_1_myristoleic_acid_
0
MUFA_16_1_palmitoleic_acid_
1
MUFA_18_1_oleic_acid_
29
MUFA_20_1_gadoleic_acid_
0
MUFA_22_1_erucic_acid_
0
PUFA_18_2_linoleic_acid_
18
PUFA_18_3_linolenic_acid_
2
PUFA_18_4_parinaric_acid_
0
PUFA_20_4_arachidonic_acid_
0
PUFA_20_5_eicosapentaenoic_acid_.EPA._
0
PUFA_22_5_docosapentaenoic_acid_.DPA._
0
PUFA_22_6_docosahexaenoic_acid_.DHA._
0
Tryptophan
1
Threonine
3
Isoleucine
3
Leucine
5
Lysine
4
Methionine
1
Cystine
1
Phenylalanine
3
Tyrosine
2
Valine
3
Arginine
3
Histidine
2
Alanine
3
Aspartic_Acid
6
Glutamic_Acid
14
Glycine
3
Proline
5
Serine
3
Aspartame
2
Saccharin
0
Caffeine
112
Phytic_Acid
571
Oxalic_Acid
109
X3_Methylhistidine
10
Sucrose_Polyester
0
Ash
17
Water
2742
perc_Calories_from_Fat
35
perc_Calories_from_Carbohydrate
52
perc_Calories_from_Protein
13
perc_Calories_from_Alcohol
0
perc_Calories_from_SFA
11
perc_Calories_from_MUFA
12
perc_Calories_from_PUFA
8
Polyunsaturated_to_Saturated_Fat_Ratio
1
Cholesterol_to_Saturated_Fatty_Acid_Index
37
Total_Vitamin_A_Activity_Retinol_Equivalents_
627
TRANS_18_1_trans_octadecenoic_acid_
2
TRANS_18_2_trans_octadecadienoic_acid_
0
TRANS_16_1_trans_hexadecenoic_acid_
0
Total_Trans_Fatty_Acids_TRANS_
2
User_Nutrient_1
0
User_Nutrient_2
0
User_Nutrient_3
0
User_Nutrient_4
0
User_Nutrient_5
0
User_Nutrient_6
0
User_Nutrient_7
0
User_Nutrient_8
0
User_Nutrient_9
0
User_Nutrient_10
0
Beta_Carotene_provitamin_A_carotenoid_
1038
Alpha_Carotene_provitamin_A_carotenoid_
360
Beta_Cryptoxanthin_provitamin_A_carotenoid_
260
Lutein_._Zeaxanthin
788
Lycopene
1771
Dietary_Folate_Equivalents
552
Natural_Folate
223
Synthetic_Folate
194
Total_Vitamin_A_Activity_Retinol_Activity_Equivalents_
515
Energy_kilojoules_
8927
Niacin_Equivalents
38
Total_Sugars
138
Omega_3_Fatty_Acids
2
Manganese
2
Vitamin_E_International_Units_
14
Natural_Alpha_Tocopherol_RRR_alpha_tocopherol_or_d_alpha_tocopherol_
8
Synthetic_Alpha_Tocopherol_all_rac_alpha_tocopherol_or_dl_alpha_tocopherol_
2
Daidzein
0
Genistein
0
Glycitein
0
Coumestrol
0
Biochanin_A
0
Formononetin
0
Added_Sugars_by_Available_Carbohydrate_
114
Acesulfame_Potassium
25
Sucralose
23
Available_Carbohydrate
269
Glycemic_Index_glucose_reference_
60
Glycemic_Index_bread_reference_
86
Glycemic_Load_glucose_reference_
163
Glycemic_Load_bread_reference_
232
Choline
265
Betaine
103
Erythritol
0
Inositol
0
Isomalt
0
Lactitol
0
Maltitol
0
Mannitol
0
Pinitol
0
Sorbitol
0
Xylitol
0
Nitrogen
11
Total_Conjugated_Linoleic_Acid_CLA_18_2_
0
CLA_cis_9_trans_11
0
CLA_trans_10_cis_12
0
Tagatose
5
Vitamin_D2_ergocalciferol_
0
Vitamin_D3_cholecalciferol_
2
Added_Sugars_by_Total_Sugars_
89
Total_Grains_ounce_equivalents_
9
Whole_Grains_ounce_equivalents_
0
Refined_Grains_ounce_equivalents_
8
PUFA_18_3_n_3_alpha_linolenic_acid_.ALA._
2
Solid_Fats
33
Citrus_Juice
0
Fruit_Juice_excluding_Citrus_Juice
0
Citrus_Fruit
1
Fruit_excluding_Citrus_Fruit
1
Avocado_and_Similar
1
Fried_Fruits
0
Fruit_based_Savory_Snack
0
Dark_green_Vegetables
0
Deep_yellow_Vegetables
0
Tomato
0
White_Potatoes
0
Fried_Potatoes
0
Other_Starchy_Vegetables
0
Legumes_cooked_dried_beans_
0
Other_Vegetables
1
Fried_Vegetables
0
Vegetable_Juice
0
TOTAL_VEGETABLES_COMPONENT_net_count_Daniela
1
Vegetable_based_Savory_Snack
0
Grains_Flour_and_Dry_Mixes_Whole_Grain
0
Grains_Flour_and_Dry_Mixes_Some_Whole_Grain
0
Grains_Flour_and_Dry_Mixes_Refined_Grain
1
Loaf_type_Bread_and_Plain_Rolls_Whole_Grain
0
Loaf_type_Bread_and_Plain_Rolls_Some_Whole_Grain
0
Loaf_type_Bread_and_Plain_Rolls_Refined_Grain
2
Other_Breads_quick_breads_corn_muffins_tortillas_Whole_Grain
0
Other_Breads_quick_breads_corn_muffins_tortillas_Some_Whole_Grain
0
Other_Breads_quick_breads_corn_muffins_tortillas_Refined_Grain
4
Crackers_Whole_Grain
0
Crackers_Some_Whole_Grain
0
Crackers_Refined_Grain
0
Pasta_Whole_Grain
0
Pasta_Some_Whole_Grain
0
Pasta_Refined_Grain
0
Ready_to_eat_Cereal_not_presweetened_Whole_Grain
0
Ready_to_eat_Cereal_not_presweetened_Some_Whole_Grain
0
Ready_to_eat_Cereal_not_presweetened_Refined_Grain
0
Ready_to_eat_Cereal_presweetened_Whole_Grain
0
Ready_to_eat_Cereal_presweetened_Some_Whole_Grain
0
Ready_to_eat_Cereal_presweetened_Refined_Grain
0
Cakes_Cookies_Pies_Pastries_Danish_Doughnuts_and_Cobblers_Whole_Grain
0
Cakes_Cookies_Pies_Pastries_Danish_Doughnuts_and_Cobblers_Some_Whole_Grai
0
Cakes_Cookies_Pies_Pastries_Danish_Doughnuts_and_Cobblers_Refined_Grain
0
Snack_Bars_Whole_Grain
0
Snack_Bars_Some_Whole_Grain
0
Snack_Bars_Refined_Grain
0
Snack_Chips_Whole_Grain
0
Snack_Chips_Some_Whole_Grain
0
Snack_Chips_Refined_Grain
0
Popcorn
0
Flavored_Popcorn
0
Baby_Food_Grain_Mixtures_Refined_Grain
0
Beef
1
Lean_Beef
0
Veal
0
Lean_Veal
0
Lamb
0
Lean_Lamb
0
Fresh_Pork
0
Lean_Fresh_Pork
0
Cured_Pork
0
Lean_Cured_Pork
0
Game
0
Poultry
0
Lean_Poultry
2
Fried_Chicken_Commercial_Entr_and_Fast_Food
0
Fish_Fresh_and_Smoked
0
Lean_Fish_Fresh_and_Smoked
0
Fried_Fish_Commercial_Entre_and_Fast_Food
0
Shellfish
0
Fried_Shellfish_Commercial_Entre_and_Fast_Food
0
Cold_Cuts_and_Sausage
0
Lean_Cold_Cuts_and_Sausage
0
Organ_Meats
0
Baby_Food_Meat_Mixtures
0
Meat_based_Savory_Snack
0
Eggs
0
Egg_Substitute
0
Nuts_and_Seeds
0
Nut_and_Seed_Butters
0
Meat_Alternatives
0
Milk_Whole
0
Milk_Reduced_Fat
0
Milk_Low_Fat_and_Fat_Free
0
Milk_Nondairy
0
Ready_to_drink_Flavored_Milk_Whole
0
Ready_to_drink_Flavored_Milk_Reduced_Fat
0
Ready_to_drink_Flavored_Milk_Low_Fat_and_Fat_Free
0
Sweetened_Flavored_Milk_Beverage_Powder_with_Non_fat_Dry_Milk
0
Artificially_Sweetened_Flavored_Milk_Beverage_Powder_with_Non_fat_Dry_Milk
0
Sweetened_Flavored_Milk_Beverage_Powder_without_Non_fat_Dry_Milk
0
Artificially_Sweetened_Flavored_Milk_Beverage_Powder_without_Non_fat_Dry_Milk
0
Cheese_Full_Fat
0
Cheese_Reduced_Fat
0
Cheese_Low_Fat_and_Fat_Free
0
Cheese_Nondairy
0
Yogurt_Sweetened_Whole_Milk
0
Yogurt_Sweetened_Low_Fat
0
Yogurt_Sweetened_Fat_Free
0
Yogurt_Artificially_Sweetened_Whole_Milk
0
Yogurt_Artificially_Sweetened_Low_Fat
0
Yogurt_Artificially_Sweetened_Fat_Free
0
Yogurt_Nondairy
0
Frozen_Dairy_Dessert
0
Frozen_Nondairy_Dessert
0
Pudding_and_Other_Dairy_Dessert
0
Artificially_Sweetened_Pudding_and_Other_Dairy_Dessert
0
Cream
0
Cream_Reduced_Fat
0
Cream_Low_Fat_and_Fat_Free
0
Cream_Nondairy
0
Dairy_based_Sweetened_Meal_Replacement.Supplement
0
Dairy_based_Artificially_Sweetened_Meal_Replacement.Supplement
0
Infant_Formula
0
Infant_Formula_Nondairy
0
Margarine_Regular
0
Margarine_Reduced_Fat
0
Oil
0
Shortening
1
Butter_and_Other_Animal_Fats_Regular
1
Butter_and_Other_Animal_Fats_Reduced_Fat
0
Salad_Dressing_Regular
1
Salad_Dressing_Reduced_Fat.Reduced_Calorie.Fat_Free
0
Sugar
0
Sugar_Substitute
0
Syrup_Honey_Jam_Jelly_Preserves
0
Sauces_Sweet_Regular
0
Sauces_Sweet_Reduced_Fat.Reduced_Calorie.Fat_Free
0
Chocolate_Candy
1
Non_chocolate_Candy
1
Frosting_or_Glaze
0
Sweetened_Soft_Drinks
0
Artificially_Sweetened_Soft_Drinks
0
Unsweetened_Soft_Drinks
0
Sweetened_Fruit_Drinks
0
Artificially_Sweetened_Fruit_Drinks
1
Sweetened_Tea
0
Artificially_Sweetened_Tea
0
Unsweetened_Tea
0
Sweetened_Coffee
0
Artificially_Sweetened_Coffee
0
Unsweetened_Coffee
1
Sweetened_Coffee_Substitutes
0
Artificially_Sweetened_Coffee_Substitutes
0
Unsweetened_Coffee_Substitutes
0
Sweetened_Water
0
Artificially_Sweetened_Water
0
Unsweetened_Water
7
Nondairy_based_Sweetened_Meal_Replacement.Supplement
1
Nondairy_based_Artificially_Sweetened_Meal_Replacement.Supplement
0
Nondairy_based_Unsweetened_Meal_Replacement.Supplement
0
Non_alcoholic_Beer
0
Non_alcoholic_Light_Beer
0
Beer_and_Ales
0
Cordial_and_Liqueur
0
Distilled_Liquor
0
Wine
0
Gravy_Regular
0
Gravy_Reduced_Fat.Fat_Free
0
Sauces_and_Condiments_Regular
0
Sauces_and_Condiments_Reduced_Fat
0
Pickled_Foods
0
Miscellaneous_Dessert
0
Non_grain_Flour_and_Similar
0
Soup_Broth
0
Baby_Food_Dessert
0
Miscellaneous_Baby_Food_Mixtures
0
Baby_Food_Grain_Mixtures_Whole_Grain
0
Baby_Food_Grain_Mixtures_Some_Whole_Grain
0
HEI_2015_TOTAL_SCORE
45
Energy.1
6401
total_vegetable_servings_in_cup_equivalents
2
greens_and_beans_servings_in_cup_equivalents
0
total_fruit_servings_in_cup_equivalents
4
whole_fruit_servings_in_cup_equivalents
4
whole_grain_servings_in_ounce_equivalents
1
dairy_servings_in_cup_equivalents
4
total_protein_servings_in_ounce_equivalents
8
sea_food_and_plant_protein_servings_in_ounce_equivalents
0
sodium_intake_in_grams
8
refined_grains_in_ounce_equivalents
25
kcal_from_added_sugars
1065
HEI_2015_COMPONENT_1_TOTAL_VEGETABLES_0_5_
2
HEI_2015_COMPONENT_2_GREENS_AND_BEANS_0_5_
0
HEI_2015_COMPONENT_3_TOTAL_FRUIT_0_5_
4
HEI_2015_COMPONENT_4_WHOLE_FRUIT_0_5_
5
HEI_2015_COMPONENT_5_WHOLE_GRAINS_0_10_
1
HEI_2015_COMPONENT_6_DAIRY_0_10_
5
HEI_2015_COMPONENT_7_TOTAL_PROTEIN_FOODS_0_5_
3
HEI_2015_COMPONENT_8_SEAFOOD_AND_PLANT_PROTEIN_0_5_
0
HEI_2015_COMPONENT_9_FATTY_ACID_RATIO_0_10_
5
HEI_2010_COMPONENT_10_SODIUM_0_10_
8
HEI_2015_COMPONENT_11_REFINED_GRAINS_0_10_
1
HEI_2015_COMPONENT_12_ADDED_SUGARS_0_10_
5
HEI_2015_COMPONENT_13_SATURATED_FATS_0_10_
6
total_vegetable_servings_in_cup_equivalents_PER_1000_KCAL
0
greens_and_beans_servings_in_cup_equivalents_PER_1000_KCAL
0
total_fruit_servings_in_cup_equivalents_PER_1000_KCAL
1
whole_fruit_servings_in_cup_equivalents_PER_1000_KCAL
1
whole_grain_servings_in_ounce_equivalents_PER_1000_KCAL
0
dairy_servings_in_cup_equivalents_PER_1000_KCAL
1
protein_servings_in_ounce_equivalents_PER_1000_KCAL
1
sea_food_and_plant_protein_servings_in_ounce_equivalents_PER_1000_KCAL
0
fatty_acid_ratio
2
sodium_intake_in_grams_PER_1000_KCAL
1
refined_grains_in_ounce_equivalents_PER_1000_KCAL
4
percent_kcal_from_added_sugars
17
percent_saturated_fatty_acids
11
AHEI_10_Score_0_110_
50
Birthweight_pounds
7.7
Birthweight_g
3492.658
Preterm
No
Delivery_mode
vaginal
study_arm.y
Arm1
study_group.y
IBD_IBD_AID
CD_UC_HC_diagnosis.y
UC
IBD_group.y
IBD
Age
36
BMI
38.2
BMI_category_who
Obese
Race
White
Hispanic_or_Latino_descent
No
Current_smoking_status
Non_smoker
alcohol_during_pregnancy
No
alcohol_but_not_during_pregnancy
Yes
recreational_drugs_during_preg
No
general_health_status
Good
marital_status
Married
people_living_in_your_household
3
highest_education
Graduate_or_professional_degree
annual_gross_household_income
$100000_or_more
Psoriasis
NA
Lupus
NA
Rheumatoid_Arthritis
NA
Chronic_intestinal_disease_controls_only
NA
High_blood_pressure
NA
Autoimmune_Disorders_not_IBD
NA
All_diasease_names
NA
Other_diseases
NA
If_other_disease_please_specify
NA
Do_you_have_diarrhea
NA
Do_you_have_constipation
NA
current_illness_or_infection
No
Age_at_Diagnosis
A1
Disease_location
L2_colonic
Behaviour
B1_non_stricturing_non_penetrating
Perianal_disease
No
Previous_surgery_for_IBD
No
HBI_Score
remission
Have_you_had_any_recent_flare_ups
Yes
Gestational_week_of_the_flare
second_trimester
IBD_general_name
Aminosalicylates
IBD_Meds
Yes
Probiotics
NA
Prenatal_Vitamins
Yes
Vitamin_or_Supplement
No
vitamin_name
No
Non_IBD_Meds
NA
antibiotic_currently
NA
antibiotics_in_the_last_year
NA
antibiotic_name
No
antibiotic_during_pregnancy
No
antibiotic_currently_or_during_pregnancy
No
Gestational_weeks_of_antibiotics1
NA
special_diets
NA
Pregnancies
2
children_have_you_given_birth_to
1
miscarriages_or_abortions
0
Gestational_age_at_enrollment_weeks
26
Fertility_medications
No
Intrauterine_insemination
No
In_vitro_fertilization
No
Diabetes_pregnancy_related
No
Hypertension_pregnancy_related
No
BioSampleModel
Metagenome or environmental