human metagenome
study_ID_mom
10010
host
Homo sapiens
geographic location
USA
collection date
2020
city
Roslyn Heights
state
NY
latitude and longitude
40.78862938 N 73.64473082 W
calpro_ng_mg
31.994
vaginalsubCST
V
vaginalCST
V
Sequencing_Run
X
CD_UC_HC_diagnosis.x
CD
IBD_group.x
IBD
Total_Grams
2730
Energy
1955
Total_Fat
84
Total_Carbohydrate
258
Total_Protein
63
Animal_Protein
28
Vegetable_Protein
35
Alcohol
0
Cholesterol
231
Total_Saturated_Fatty_Acids_SFA_
23
Total_Monounsaturated_Fatty_Acids_MUFA_
38
Total_Polyunsaturated_Fatty_Acids_PUFA_
16
Fructose
37
Galactose
1
Glucose
35
Lactose
8
Maltose
5
Sucrose
40
Starch
77
Total_Dietary_Fiber
33
Soluble_Dietary_Fiber
10
Insoluble_Dietary_Fiber
23
Pectins
7
Total_Vitamin_A_Activity_International_Units_
7194
Beta_Carotene_Equivalents_derived_from_provitamin_A_carotenoids_
3651
Retinol
333
Vitamin_D_calciferol_
6
Total_Alpha_Tocopherol_Equivalents
25
Vitamin_E_Total_Alpha_Tocopherol_
20
Beta_Tocopherol
0
Gamma_Tocopherol
7
Delta_Tocopherol
1
Vitamin_K_phylloquinone_
120
Vitamin_C_ascorbic_acid_
309
Thiamin_vitamin_B1_
1
Riboflavin_vitamin_B2_
2
Niacin_vitamin_B3_
17
Pantothenic_Acid
8
Vitamin_B_6_pyridoxine_pyridoxyl_._pyridoxamine_
3
Total_Folate
638
Vitamin_B_12_cobalamin_
6
Calcium
1310
Phosphorus
1344
Magnesium
429
Iron
18
Zinc
12
Copper
2
Selenium
73
Sodium
2714
Potassium
3461
SFA_4_0_butyric_acid_
0
SFA_6_0_caproic_acid_
0
SFA_8_0_caprylic_acid_
0
SFA_10_0_capric_acid_
0
SFA_12_0_lauric_acid_
1
SFA_14_0_myristic_acid_
2
SFA_16_0_palmitic_acid_
13
SFA_17_0_margaric_acid_
0
SFA_18_0_stearic_acid_
4
SFA_20_0_arachidic_acid_
0
SFA_22_0_behenic_acid_
0
MUFA_14_1_myristoleic_acid_
0
MUFA_16_1_palmitoleic_acid_
1
MUFA_18_1_oleic_acid_
37
MUFA_20_1_gadoleic_acid_
0
MUFA_22_1_erucic_acid_
0
PUFA_18_2_linoleic_acid_
14
PUFA_18_3_linolenic_acid_
2
PUFA_18_4_parinaric_acid_
0
PUFA_20_4_arachidonic_acid_
0
PUFA_20_5_eicosapentaenoic_acid_.EPA._
0
PUFA_22_5_docosapentaenoic_acid_.DPA._
0
PUFA_22_6_docosahexaenoic_acid_.DHA._
0
Tryptophan
1
Threonine
2
Isoleucine
3
Leucine
5
Lysine
4
Methionine
1
Cystine
1
Phenylalanine
3
Tyrosine
2
Valine
3
Arginine
4
Histidine
2
Alanine
3
Aspartic_Acid
7
Glutamic_Acid
12
Glycine
3
Proline
4
Serine
3
Aspartame
0
Saccharin
0
Caffeine
49
Phytic_Acid
1377
Oxalic_Acid
406
X3_Methylhistidine
4
Sucrose_Polyester
0
Ash
19
Water
2312
perc_Calories_from_Fat
38
perc_Calories_from_Carbohydrate
50
perc_Calories_from_Protein
12
perc_Calories_from_Alcohol
0
perc_Calories_from_SFA
10
perc_Calories_from_MUFA
17
perc_Calories_from_PUFA
7
Polyunsaturated_to_Saturated_Fat_Ratio
1
Cholesterol_to_Saturated_Fatty_Acid_Index
34
Total_Vitamin_A_Activity_Retinol_Equivalents_
941
TRANS_18_1_trans_octadecenoic_acid_
1
TRANS_18_2_trans_octadecadienoic_acid_
0
TRANS_16_1_trans_hexadecenoic_acid_
0
Total_Trans_Fatty_Acids_TRANS_
1
User_Nutrient_1
0
User_Nutrient_2
0
User_Nutrient_3
0
User_Nutrient_4
0
User_Nutrient_5
0
User_Nutrient_6
0
User_Nutrient_7
0
User_Nutrient_8
0
User_Nutrient_9
0
User_Nutrient_10
0
Beta_Carotene_provitamin_A_carotenoid_
3058
Alpha_Carotene_provitamin_A_carotenoid_
820
Beta_Cryptoxanthin_provitamin_A_carotenoid_
367
Lutein_._Zeaxanthin
2816
Lycopene
2221
Dietary_Folate_Equivalents
840
Natural_Folate
349
Synthetic_Folate
289
Total_Vitamin_A_Activity_Retinol_Activity_Equivalents_
637
Energy_kilojoules_
8181
Niacin_Equivalents
29
Total_Sugars
125
Omega_3_Fatty_Acids
1
Manganese
5
Vitamin_E_International_Units_
33
Natural_Alpha_Tocopherol_RRR_alpha_tocopherol_or_d_alpha_tocopherol_
16
Synthetic_Alpha_Tocopherol_all_rac_alpha_tocopherol_or_dl_alpha_tocopherol_
8
Daidzein
3
Genistein
5
Glycitein
1
Coumestrol
0
Biochanin_A
0
Formononetin
0
Added_Sugars_by_Available_Carbohydrate_
52
Acesulfame_Potassium
0
Sucralose
0
Available_Carbohydrate
225
Glycemic_Index_glucose_reference_
54
Glycemic_Index_bread_reference_
77
Glycemic_Load_glucose_reference_
122
Glycemic_Load_bread_reference_
174
Choline
332
Betaine
187
Erythritol
0
Inositol
1
Isomalt
0
Lactitol
0
Maltitol
0
Mannitol
1
Pinitol
0
Sorbitol
1
Xylitol
0
Nitrogen
10
Total_Conjugated_Linoleic_Acid_CLA_18_2_
0
CLA_cis_9_trans_11
0
CLA_trans_10_cis_12
0
Tagatose
2
Vitamin_D2_ergocalciferol_
2
Vitamin_D3_cholecalciferol_
4
Added_Sugars_by_Total_Sugars_
43
Total_Grains_ounce_equivalents_
4
Whole_Grains_ounce_equivalents_
2
Refined_Grains_ounce_equivalents_
2
PUFA_18_3_n_3_alpha_linolenic_acid_.ALA._
1
Solid_Fats
27
Citrus_Juice
1
Fruit_Juice_excluding_Citrus_Juice
1
Citrus_Fruit
1
Fruit_excluding_Citrus_Fruit
1
Avocado_and_Similar
1
Fried_Fruits
0
Fruit_based_Savory_Snack
0
Dark_green_Vegetables
1
Deep_yellow_Vegetables
0
Tomato
0
White_Potatoes
1
Fried_Potatoes
0
Other_Starchy_Vegetables
0
Legumes_cooked_dried_beans_
0
Other_Vegetables
2
Fried_Vegetables
0
Vegetable_Juice
1
TOTAL_VEGETABLES_COMPONENT_net_count_Daniela
5
Vegetable_based_Savory_Snack
0
Grains_Flour_and_Dry_Mixes_Whole_Grain
1
Grains_Flour_and_Dry_Mixes_Some_Whole_Grain
0
Grains_Flour_and_Dry_Mixes_Refined_Grain
0
Loaf_type_Bread_and_Plain_Rolls_Whole_Grain
0
Loaf_type_Bread_and_Plain_Rolls_Some_Whole_Grain
0
Loaf_type_Bread_and_Plain_Rolls_Refined_Grain
1
Other_Breads_quick_breads_corn_muffins_tortillas_Whole_Grain
0
Other_Breads_quick_breads_corn_muffins_tortillas_Some_Whole_Grain
0
Other_Breads_quick_breads_corn_muffins_tortillas_Refined_Grain
0
Crackers_Whole_Grain
0
Crackers_Some_Whole_Grain
0
Crackers_Refined_Grain
0
Pasta_Whole_Grain
0
Pasta_Some_Whole_Grain
0
Pasta_Refined_Grain
0
Ready_to_eat_Cereal_not_presweetened_Whole_Grain
1
Ready_to_eat_Cereal_not_presweetened_Some_Whole_Grain
0
Ready_to_eat_Cereal_not_presweetened_Refined_Grain
0
Ready_to_eat_Cereal_presweetened_Whole_Grain
0
Ready_to_eat_Cereal_presweetened_Some_Whole_Grain
0
Ready_to_eat_Cereal_presweetened_Refined_Grain
0
Cakes_Cookies_Pies_Pastries_Danish_Doughnuts_and_Cobblers_Whole_Grain
0
Cakes_Cookies_Pies_Pastries_Danish_Doughnuts_and_Cobblers_Some_Whole_Grai
0
Cakes_Cookies_Pies_Pastries_Danish_Doughnuts_and_Cobblers_Refined_Grain
0
Snack_Bars_Whole_Grain
0
Snack_Bars_Some_Whole_Grain
1
Snack_Bars_Refined_Grain
0
Snack_Chips_Whole_Grain
0
Snack_Chips_Some_Whole_Grain
0
Snack_Chips_Refined_Grain
0
Popcorn
0
Flavored_Popcorn
0
Baby_Food_Grain_Mixtures_Refined_Grain
0
Beef
1
Lean_Beef
0
Veal
0
Lean_Veal
0
Lamb
0
Lean_Lamb
0
Fresh_Pork
0
Lean_Fresh_Pork
0
Cured_Pork
0
Lean_Cured_Pork
0
Game
0
Poultry
0
Lean_Poultry
0
Fried_Chicken_Commercial_Entr_and_Fast_Food
0
Fish_Fresh_and_Smoked
0
Lean_Fish_Fresh_and_Smoked
0
Fried_Fish_Commercial_Entre_and_Fast_Food
0
Shellfish
0
Fried_Shellfish_Commercial_Entre_and_Fast_Food
0
Cold_Cuts_and_Sausage
1
Lean_Cold_Cuts_and_Sausage
0
Organ_Meats
0
Baby_Food_Meat_Mixtures
0
Meat_based_Savory_Snack
0
Eggs
1
Egg_Substitute
0
Nuts_and_Seeds
1
Nut_and_Seed_Butters
1
Meat_Alternatives
0
Milk_Whole
0
Milk_Reduced_Fat
0
Milk_Low_Fat_and_Fat_Free
0
Milk_Nondairy
0
Ready_to_drink_Flavored_Milk_Whole
0
Ready_to_drink_Flavored_Milk_Reduced_Fat
0
Ready_to_drink_Flavored_Milk_Low_Fat_and_Fat_Free
0
Sweetened_Flavored_Milk_Beverage_Powder_with_Non_fat_Dry_Milk
0
Artificially_Sweetened_Flavored_Milk_Beverage_Powder_with_Non_fat_Dry_Milk
0
Sweetened_Flavored_Milk_Beverage_Powder_without_Non_fat_Dry_Milk
0
Artificially_Sweetened_Flavored_Milk_Beverage_Powder_without_Non_fat_Dry_Milk
0
Cheese_Full_Fat
0
Cheese_Reduced_Fat
0
Cheese_Low_Fat_and_Fat_Free
0
Cheese_Nondairy
0
Yogurt_Sweetened_Whole_Milk
0
Yogurt_Sweetened_Low_Fat
0
Yogurt_Sweetened_Fat_Free
0
Yogurt_Artificially_Sweetened_Whole_Milk
0
Yogurt_Artificially_Sweetened_Low_Fat
0
Yogurt_Artificially_Sweetened_Fat_Free
0
Yogurt_Nondairy
0
Frozen_Dairy_Dessert
1
Frozen_Nondairy_Dessert
0
Pudding_and_Other_Dairy_Dessert
0
Artificially_Sweetened_Pudding_and_Other_Dairy_Dessert
0
Cream
0
Cream_Reduced_Fat
0
Cream_Low_Fat_and_Fat_Free
0
Cream_Nondairy
1
Dairy_based_Sweetened_Meal_Replacement.Supplement
0
Dairy_based_Artificially_Sweetened_Meal_Replacement.Supplement
0
Infant_Formula
0
Infant_Formula_Nondairy
0
Margarine_Regular
0
Margarine_Reduced_Fat
0
Oil
3
Shortening
0
Butter_and_Other_Animal_Fats_Regular
0
Butter_and_Other_Animal_Fats_Reduced_Fat
0
Salad_Dressing_Regular
0
Salad_Dressing_Reduced_Fat.Reduced_Calorie.Fat_Free
0
Sugar
0
Sugar_Substitute
0
Syrup_Honey_Jam_Jelly_Preserves
0
Sauces_Sweet_Regular
0
Sauces_Sweet_Reduced_Fat.Reduced_Calorie.Fat_Free
0
Chocolate_Candy
0
Non_chocolate_Candy
0
Frosting_or_Glaze
0
Sweetened_Soft_Drinks
0
Artificially_Sweetened_Soft_Drinks
0
Unsweetened_Soft_Drinks
0
Sweetened_Fruit_Drinks
0
Artificially_Sweetened_Fruit_Drinks
0
Sweetened_Tea
0
Artificially_Sweetened_Tea
0
Unsweetened_Tea
0
Sweetened_Coffee
0
Artificially_Sweetened_Coffee
0
Unsweetened_Coffee
1
Sweetened_Coffee_Substitutes
0
Artificially_Sweetened_Coffee_Substitutes
0
Unsweetened_Coffee_Substitutes
0
Sweetened_Water
0
Artificially_Sweetened_Water
0
Unsweetened_Water
3
Nondairy_based_Sweetened_Meal_Replacement.Supplement
0
Nondairy_based_Artificially_Sweetened_Meal_Replacement.Supplement
0
Nondairy_based_Unsweetened_Meal_Replacement.Supplement
0
Non_alcoholic_Beer
0
Non_alcoholic_Light_Beer
0
Beer_and_Ales
0
Cordial_and_Liqueur
0
Distilled_Liquor
0
Wine
0
Gravy_Regular
0
Gravy_Reduced_Fat.Fat_Free
0
Sauces_and_Condiments_Regular
0
Sauces_and_Condiments_Reduced_Fat
4
Pickled_Foods
2
Miscellaneous_Dessert
0
Non_grain_Flour_and_Similar
0
Soup_Broth
0
Baby_Food_Dessert
0
Miscellaneous_Baby_Food_Mixtures
0
Baby_Food_Grain_Mixtures_Whole_Grain
0
Baby_Food_Grain_Mixtures_Some_Whole_Grain
0
HEI_2015_TOTAL_SCORE
83
Energy.1
5866
total_vegetable_servings_in_cup_equivalents
7
greens_and_beans_servings_in_cup_equivalents
2
total_fruit_servings_in_cup_equivalents
7
whole_fruit_servings_in_cup_equivalents
5
whole_grain_servings_in_ounce_equivalents
6
dairy_servings_in_cup_equivalents
4
total_protein_servings_in_ounce_equivalents
13
sea_food_and_plant_protein_servings_in_ounce_equivalents
7
sodium_intake_in_grams
8
refined_grains_in_ounce_equivalents
7
kcal_from_added_sugars
514
HEI_2015_COMPONENT_1_TOTAL_VEGETABLES_0_5_
5
HEI_2015_COMPONENT_2_GREENS_AND_BEANS_0_5_
5
HEI_2015_COMPONENT_3_TOTAL_FRUIT_0_5_
5
HEI_2015_COMPONENT_4_WHOLE_FRUIT_0_5_
5
HEI_2015_COMPONENT_5_WHOLE_GRAINS_0_10_
7
HEI_2015_COMPONENT_6_DAIRY_0_10_
5
HEI_2015_COMPONENT_7_TOTAL_PROTEIN_FOODS_0_5_
5
HEI_2015_COMPONENT_8_SEAFOOD_AND_PLANT_PROTEIN_0_5_
5
HEI_2015_COMPONENT_9_FATTY_ACID_RATIO_0_10_
9
HEI_2010_COMPONENT_10_SODIUM_0_10_
7
HEI_2015_COMPONENT_11_REFINED_GRAINS_0_10_
10
HEI_2015_COMPONENT_12_ADDED_SUGARS_0_10_
9
HEI_2015_COMPONENT_13_SATURATED_FATS_0_10_
7
total_vegetable_servings_in_cup_equivalents_PER_1000_KCAL
1
greens_and_beans_servings_in_cup_equivalents_PER_1000_KCAL
0
total_fruit_servings_in_cup_equivalents_PER_1000_KCAL
1
whole_fruit_servings_in_cup_equivalents_PER_1000_KCAL
1
whole_grain_servings_in_ounce_equivalents_PER_1000_KCAL
1
dairy_servings_in_cup_equivalents_PER_1000_KCAL
1
protein_servings_in_ounce_equivalents_PER_1000_KCAL
2
sea_food_and_plant_protein_servings_in_ounce_equivalents_PER_1000_KCAL
1
fatty_acid_ratio
2
sodium_intake_in_grams_PER_1000_KCAL
1
refined_grains_in_ounce_equivalents_PER_1000_KCAL
1
percent_kcal_from_added_sugars
9
percent_saturated_fatty_acids
10
AHEI_10_Score_0_110_
63
Birthweight_pounds
6.75
Birthweight_g
3061.746
Preterm
No
Delivery_mode
vaginal
study_arm.y
Arm1
study_group.y
IBD_IBD_AID
CD_UC_HC_diagnosis.y
CD
IBD_group.y
IBD
Age
34
BMI
26.6
BMI_category_who
Overweight
Race
White
Hispanic_or_Latino_descent
No
Current_smoking_status
Non_smoker
alcohol_during_pregnancy
No
alcohol_but_not_during_pregnancy
Yes
recreational_drugs_during_preg
No
general_health_status
Fair
marital_status
Married
people_living_in_your_household
3
highest_education
Bachelor_degree
annual_gross_household_income
$100000_or_more
Psoriasis
No
Lupus
No
Rheumatoid_Arthritis
Yes
Chronic_intestinal_disease_controls_only
NA
High_blood_pressure
No
Autoimmune_Disorders_not_IBD
No
All_diasease_names
Rheumatoid_Arthritis
Other_diseases
No
If_other_disease_please_specify
NA
Do_you_have_diarrhea
NA
Do_you_have_constipation
NA
current_illness_or_infection
Yes
Age_at_Diagnosis
A1
Disease_location
NA
Behaviour
NA
Perianal_disease
NA
Previous_surgery_for_IBD
No
HBI_Score
NA
Have_you_had_any_recent_flare_ups
Yes
Gestational_week_of_the_flare
NA
IBD_general_name
Anti_TNF
IBD_Meds
Yes
Probiotics
Yes
Prenatal_Vitamins
Yes
Vitamin_or_Supplement
No
vitamin_name
No
Non_IBD_Meds
NA
antibiotic_currently
No
antibiotics_in_the_last_year
Yes
antibiotic_name
other
antibiotic_during_pregnancy
No
antibiotic_currently_or_during_pregnancy
No
Gestational_weeks_of_antibiotics1
NA
special_diets
Paleo_dairy_gluten_free
Pregnancies
2
children_have_you_given_birth_to
1
miscarriages_or_abortions
1
Gestational_age_at_enrollment_weeks
NA
Fertility_medications
No
Intrauterine_insemination
No
In_vitro_fertilization
No
Diabetes_pregnancy_related
No
Hypertension_pregnancy_related
No
BioSampleModel
Metagenome or environmental