Bacteroides uniformis
ENA first public
2024-09-21
INSDC center name
EMBL Heidelberg
INSDC status
public
Submitter Id
spire_mag_01398290
assembly quality
Many fragments with little to no review of assembly other than reporting of standard assembly statistics
assembly software
megahit 1.2.9
binning parameters
default
binning software
metabat 2.12.1
broad-scale environmental context
human digestive system
broker name
EBI-EMG
collection date
2015
completeness score
85.38
completeness software
checkm2 0.1.3
contamination score
1.45
environmental medium
stool
geographic location (country and/or sea)
China
geographic location (latitude)
12.01666667
geographic location (longitude)
32.00000000
investigation type
metagenome-assembled genome
isolation_source
human gut metagenome
local environmental context
human gut
metagenomic source
human gut metagenome
project name
Two diet were used to modulate gut microbiota of T2D patients. The gut microbiota changed and the host clinical parameters were improved. Several key bacteria were identified.
sample derived from
SAMEA4019239
sample name
spire_mag_01398290
scientific_name
Bacteroides uniformis
sequencing method
Illumina HiSeq 2500
taxonomic identity marker
multi-marker approach