Bacteroides uniformis
ENA first public
2024-09-21
INSDC center name
EMBL Heidelberg
INSDC status
public
Submitter Id
spire_mag_01867098
assembly quality
Many fragments with little to no review of assembly other than reporting of standard assembly statistics
assembly software
megahit 1.2.9
binning parameters
default
binning software
metabat 2.12.1
broad-scale environmental context
human digestive system
broker name
EBI-EMG
collection date
2014
completeness score
93.31
completeness software
checkm2 0.1.3
contamination score
0.94
environmental medium
stool
geographic location (country and/or sea)
USA
geographic location (latitude)
43.67412500
geographic location (longitude)
-72.27301300
investigation type
metagenome-assembled genome
isolation_source
human gut metagenome
local environmental context
human gut
metagenomic source
human gut metagenome
project name
Investigation of intestinal bacterial colonization in pre- and full-term infants and its connection to infection and allergy risk
sample derived from
SAMN09515804
sample name
spire_mag_01867098
scientific_name
Bacteroides uniformis
sequencing method
NextSeq 500
taxonomic identity marker
multi-marker approach