feces metagenome
ENA first public
2024-10-31
External Id
SAMEA111531758
INSDC center name
Earth Hologenome Iniatiative
INSDC last update
2022-10-31T12:26:24Z
INSDC status
public
SUBMISSION_TOOL
ena-upload-cli
SUBMISSION_TOOL_VERSION
0.5.3
Submitter Id
AAX97
adapters
AGATCGGAAGAGCACACGTCTGAACTCCAGTCA AGATCGGAAGAGCGTCGTGTAGGGAAAGAGTGT
broad-scale environmental context
1000248 - Dense settlement
collection date
2020-12-22
environmental medium
animal
geographic location (country and/or sea)
France
geographic location (latitude)
43.64
geographic location (longitude)
3.86
host body product
Anal/cloacal swab
host common name
Eurasian blackcap
host length
75.0
host subject id
SD00079
host taxid
48155
host total mass
20.5
host-associated environmental package
host-associated
investigation type
metagenome
local environmental context
Field experiments on CNRS campus north of the city of Montpellier
project name
Sylvia atricapilla
sample name
AAX97
sample storage location
EHI laboratory University of Copenhagen
sample storage temperature
-20
scientific_name
feces metagenome
sequencing method
Illumina NovaSeq 6000 S4 150PE