Bacteroides uniformis
ENA first public
2024-09-21
INSDC center name
EMBL Heidelberg
INSDC status
public
Submitter Id
spire_mag_01243198
assembly quality
Many fragments with little to no review of assembly other than reporting of standard assembly statistics
assembly software
megahit 1.2.9
binning parameters
default
binning software
metabat 2.12.1
broad-scale environmental context
human digestive system
broker name
EBI-EMG
collection date
2015-07-25
completeness score
89.81
completeness software
checkm2 0.1.3
contamination score
2.33
environmental medium
stool
geographic location (country and/or sea)
China
geographic location (latitude)
missing: third party data
geographic location (longitude)
missing: third party data
investigation type
metagenome-assembled genome
isolation_source
human gut metagenome
local environmental context
human gut
metagenomic source
human gut metagenome
project name
The composition of the gut microbiota has been linked to many central nervoussystem disorders, including neuropsychiatric disorders such as autism spectrumdisorders (ASDs). Several studies have shown that changes in the microbiomemay contribute to the symptoms of ASD, and a recently published study showedthat fecal microbiota transfer therapy significantly improved autism symptoms.We performed shotgun metagenome sequencing of ASD patients (n = 43) and TD children (n = 31).
sample derived from
SAMEA4702347
sample name
spire_mag_01243198
scientific_name
Bacteroides uniformis
sequencing method
Illumina HiSeq 4000
taxonomic identity marker
multi-marker approach