Bacteroides uniformis
ENA first public
2024-09-21
INSDC center name
EMBL Heidelberg
INSDC status
public
Submitter Id
spire_mag_01134430
assembly quality
Many fragments with little to no review of assembly other than reporting of standard assembly statistics
assembly software
megahit 1.2.9
binning parameters
default
binning software
metabat 2.12.1
broad-scale environmental context
human digestive system
broker name
EBI-EMG
collection date
missing: third party data
completeness score
99.3
completeness software
checkm2 0.1.3
contamination score
6.94
environmental medium
stool
geographic location (country and/or sea)
not provided
geographic location (latitude)
not provided
geographic location (longitude)
not provided
investigation type
metagenome-assembled genome
isolation_source
human gut metagenome
local environmental context
human gut
metagenomic source
human gut metagenome
project name
This study will characterize the role of human-associated bacteria in health and disease from a sample set collected in Fiji. The study seeks to find out how people share benign bacteria that live in guts, mouths and skin with each other and with their domestic animals and surroundings. There are several diseases that are spread by bacteria between humans and between humans and their livestock. Through this study, the researchers want to determine how much bacterial sharing goes on between humans and their domestic animals.
sample derived from
SAMN02334224
sample name
spire_mag_01134430
scientific_name
Bacteroides uniformis
sequencing method
Illumina HiSeq 2000
taxonomic identity marker
multi-marker approach