Bacteroides uniformis
ENA first public
2024-09-21
INSDC center name
EMBL Heidelberg
INSDC status
public
Submitter Id
spire_mag_00328517
assembly quality
Many fragments with little to no review of assembly other than reporting of standard assembly statistics
assembly software
megahit 1.2.9
binning parameters
default
binning software
metabat 2.12.1
broad-scale environmental context
human digestive system
broker name
EBI-EMG
collection date
2016-11-21
completeness score
59.22
completeness software
checkm2 0.1.3
contamination score
0.2
environmental medium
not provided
geographic location (country and/or sea)
Japan
geographic location (latitude)
34.68500000
geographic location (longitude)
135.10150000
investigation type
metagenome-assembled genome
isolation_source
human gut metagenome
local environmental context
human gut
metagenomic source
human gut metagenome
project name
The gut microbiota has been linked to cardiovascular diseases. This study investigated the compositional and functional capacity of the gut microbiome in relation to cardiovascular diseases. We perform a metagenome-wide association study on stools from individuals with and without cardiovascular diseases.
sample derived from
SAMD00149235
sample name
spire_mag_00328517
scientific_name
Bacteroides uniformis
sequencing method
Illumina HiSeq 2500
taxonomic identity marker
multi-marker approach