metagenome
ENA first public
2024-11-04
INSDC center name
CHUV-UNIL
INSDC status
public
Submitter Id
PreFMT
adapters
CTGTCTCTTATACACATCT
broad-scale environmental context
host-associated environment
collection date
2023-03-28
environmental medium
feces
geographic location (country and/or sea)
Switzerland
geographic location (latitude)
46,5218269
geographic location (longitude)
6,6327025
host age
55
host body site
Gut
host disease status
IBS
host sex
female
local environmental context
intestine environment
negative control type
Qiagen Microbial DNA-Free Water
nucleic acid extraction
MagnNA Pure System
pcr primers
forward: CCTACGGGNGGCWGCAG, reverse: GACTACHVGGGTATCTAATCC
positive control type
20 Strain Even Mix Whole Cell Material MSA-2002
project name
IBS_FMT
sample collection method
eNaT
sample name
PreFMT
scientific_name
metagenome
target gene
16S rRNA
target subfragment
V3-V4