rhizosphere metagenome
collection_date
2021-08-02
geo_loc_name
China: Inner Mongolia
host
Potentilla acaulis
isolate
rhizosphere
title
16s of bacteria:Potentilla acaulis
library_strategy
AMPLICON
library_source
METAGENOMIC
library_selection
PCR
library_layout
paired
platform
Illumina
instrument_model
Illumina Miseq
design_description
Soil bacterial communities were analyzed using high-throughput amplicon sequencing. Bacterial 16S rRNA gene V3-V4 region was amplified using primer 338F (5'- ACT CCT ACG GGA GGC AGC AG -3') (Lane, 1991) and 806 R (5'-GGA CTA CHV GGG TWT CTA AT-3') (Caporaso et al., 2011; Walters et al., 2016)
filetype
fastq
filename
X_3.338F_806R.R1.raw.fastq.gz
filename2
X_3.338F_806R.R2.raw.fastq.gz
cultivar
not aplicable
ecotype
not aplicable
age
not collected
dev_stage
mature
tissue
rhizosphere soil 134
isolation source
Potentilla acaulis of rhizosphere
latitude and longitude
42.8 N 116.42 E
Location
Experimental Station
library_ID
X_3
BioSampleModel
Metagenome or environmental