Bacteroides uniformis
ENA first public
2024-09-21
INSDC center name
EMBL Heidelberg
INSDC status
public
Submitter Id
spire_mag_00767901
assembly quality
Many fragments with little to no review of assembly other than reporting of standard assembly statistics
assembly software
megahit 1.2.9
binning parameters
default
binning software
metabat 2.12.1
broad-scale environmental context
human digestive system
broker name
EBI-EMG
collection date
missing: third party data
completeness score
81.24
completeness software
checkm2 0.1.3
contamination score
0.04
environmental medium
stool
geographic location (country and/or sea)
Hong Kong
geographic location (latitude)
22.38000000
geographic location (longitude)
114.20000000
investigation type
metagenome-assembled genome
isolation_source
human gut metagenome
local environmental context
human gut
metagenomic source
human gut metagenome
project name
The goal of this study is to characterise diversity of gut microbial communities in southern Chinese populations.
sample derived from
SAMN13509421
sample name
spire_mag_00767901
scientific_name
Bacteroides uniformis
sequencing method
Illumina NovaSeq 6000
taxonomic identity marker
multi-marker approach