feces metagenome
ENA first public
2024-10-31
External Id
SAMEA111531805
INSDC center name
Earth Hologenome Iniatiative
INSDC last update
2022-10-31T12:26:26Z
INSDC status
public
SUBMISSION_TOOL
ena-upload-cli
SUBMISSION_TOOL_VERSION
0.5.3
Submitter Id
ABW36
adapters
AGATCGGAAGAGCACACGTCTGAACTCCAGTCA AGATCGGAAGAGCGTCGTGTAGGGAAAGAGTGT
broad-scale environmental context
1000197 - Broadleaf forest
collection date
2021-10-29
environmental medium
animal
geographic location (country and/or sea)
Germany
geographic location (latitude)
52.49
geographic location (longitude)
13.47
host body product
Anal/cloacal swab
host common name
Eurasian red squirrel
host length
58.0
host subject id
SD01177
host taxid
55149
host total mass
360.0
host-associated environmental package
host-associated
investigation type
metagenome
local environmental context
urban park with lawns and several broadleaf trees partly standing together in groups small woods
project name
Sciurus vulgaris
sample name
ABW36
sample storage location
EHI laboratory University of Copenhagen
sample storage temperature
-20
scientific_name
feces metagenome
sequencing method
Illumina NovaSeq 6000 S4 150PE