root metagenome
environment (material)
clayey field soil
collection date
2018-07-02
target gene
rRNA
geographic location (longitude)
22.39328
host subject id
175,176,177
host common name
oats
sample material processing
freezing, storing in -20 degrees, root washing, freeze-drying
host-associated environmental package
host-associated
ENA-FIRST-PUBLIC
2024-01-05T00:25:34Z
ENA-LAST-UPDATE
2024-01-05T00:25:34Z
environment (biome)
hemiboreal zone
environment (feature)
agricultural field
experimental factor
lime-stabilized wood fiber (LWF) July
geographic location (country and/or sea)
Finland
sample storage temperature
-20
organism
root metagenome
sample collection device or method
adherent soil and roots were collected with clean shovel from 15 cm x 15 cm area down to 10 cm depth
host taxid
4498
geographic location (latitude)
60.29547
scientific_name
root metagenome
common name
ITS2 amplicons, oat root sample
target subfragment
ITS2
host substrate
clayey field soil
investigation type
mimarks-specimen
sample storage duration
4
pcr primers
FWD: GTGARTCATCGAATCTTTG; REV: TCCTCCGCTTATTGATATGC
host body site
root
project name
QVIDJA soil organic amendment experiment
sequencing method
Illumina Miseq
host age
50
host dry mass
23,455
ENA-FIRST-PUBLIC
2024-01-05
ENA-LAST-UPDATE
2024-01-05