Bacteroides uniformis
ENA first public
2024-09-21
INSDC center name
EMBL Heidelberg
INSDC status
public
Submitter Id
spire_mag_00401796
assembly quality
Many fragments with little to no review of assembly other than reporting of standard assembly statistics
assembly software
megahit 1.2.9
binning parameters
default
binning software
metabat 2.12.1
broad-scale environmental context
human digestive system
broker name
EBI-EMG
collection date
2010
completeness score
92.05
completeness software
checkm2 0.1.3
contamination score
0.45
environmental medium
not provided
geographic location (country and/or sea)
not provided
geographic location (latitude)
50.85
geographic location (longitude)
5.69
investigation type
metagenome-assembled genome
isolation_source
human gut metagenome
local environmental context
human gut
metagenomic source
human gut metagenome
project name
To investigate the gut microbial characteristics of healthy Dutch children at 6-9 years as well as the relationship between their gut microbiota and multiple phenotypic factors, we collected stool samples from 281 children aged 6-9 years (mean age 7.25 years) enrolled in the KOALA Birth Cohort Study.
sample derived from
SAMEA4813854
sample name
spire_mag_00401796
scientific_name
Bacteroides uniformis
sequencing method
Illumina HiSeq 2000
taxonomic identity marker
multi-marker approach