Bacteroides uniformis
ENA first public
2024-09-21
INSDC center name
EMBL Heidelberg
INSDC status
public
Submitter Id
spire_mag_01770954
assembly quality
Many fragments with little to no review of assembly other than reporting of standard assembly statistics
assembly software
megahit 1.2.9
binning parameters
default
binning software
metabat 2.12.1
broad-scale environmental context
human digestive system
broker name
EBI-EMG
collection date
2016-12
completeness score
77.18
completeness software
checkm2 0.1.3
contamination score
1.53
environmental medium
stool
geographic location (country and/or sea)
Hong Kong
geographic location (latitude)
22.28300000
geographic location (longitude)
114.13710000
investigation type
metagenome-assembled genome
isolation_source
human gut metagenome
local environmental context
human gut
metagenomic source
human gut metagenome
project name
In this clinical study, we investigated the effect of high-intensity exercise intervention on glycaemic control in human and performed shotgun metagenomic sequencing to elucidate the role of human gut microbiota within such process.
sample derived from
SAMN09042595
sample name
spire_mag_01770954
scientific_name
Bacteroides uniformis
sequencing method
Illumina HiSeq 4000
taxonomic identity marker
multi-marker approach