Bacteroides uniformis
ENA first public
2024-09-21
INSDC center name
EMBL Heidelberg
INSDC status
public
Submitter Id
spire_mag_01123257
assembly quality
Many fragments with little to no review of assembly other than reporting of standard assembly statistics
assembly software
megahit 1.2.9
binning parameters
default
binning software
metabat 2.12.1
broad-scale environmental context
human digestive system
broker name
EBI-EMG
collection date
2014-07-25
completeness score
88.06
completeness software
checkm2 0.1.3
contamination score
2.53
environmental medium
stool
geographic location (country and/or sea)
Mozambique
geographic location (latitude)
-25.40000000
geographic location (longitude)
32.80000000
investigation type
metagenome-assembled genome
isolation_source
human gut metagenome
local environmental context
human gut
metagenomic source
human gut metagenome
project name
Human Fecal Metagenome from primarily and chronically HIV infected and non-infected subjects was sequenced using both illumina(MiSeq) sequencing and 16s V3-V4 region and shotgun
sample derived from
SAMN09355649
sample name
spire_mag_01123257
scientific_name
Bacteroides uniformis
sequencing method
Illumina MiSeq
taxonomic identity marker
multi-marker approach