Bacteroides uniformis
ENA first public
2024-09-21
INSDC center name
EMBL Heidelberg
INSDC status
public
Submitter Id
spire_mag_01091623
assembly quality
Many fragments with little to no review of assembly other than reporting of standard assembly statistics
assembly software
megahit 1.2.9
binning parameters
default
binning software
metabat 2.12.1
broad-scale environmental context
human digestive system
broker name
EBI-EMG
collection date
2012-08-20
completeness score
79.84
completeness software
checkm2 0.1.3
contamination score
0.48
environmental medium
stool
geographic location (country and/or sea)
Peru
geographic location (latitude)
not provided
geographic location (longitude)
not provided
investigation type
metagenome-assembled genome
isolation_source
human gut metagenome
local environmental context
human gut
metagenomic source
human gut metagenome
project name
Microbiome and resistome of human fecal and environmental microbiota from rural El Salvador and peri-urban Lima, Peru
sample derived from
SAMN04261331
sample name
spire_mag_01091623
scientific_name
Bacteroides uniformis
sequencing method
Illumina HiSeq 2500
taxonomic identity marker
multi-marker approach