Bacteroides uniformis
ENA first public
2024-09-21
INSDC center name
EMBL Heidelberg
INSDC status
public
Submitter Id
spire_mag_00430195
assembly quality
Many fragments with little to no review of assembly other than reporting of standard assembly statistics
assembly software
megahit 1.2.9
binning parameters
default
binning software
metabat 2.12.1
broad-scale environmental context
human digestive system
broker name
EBI-EMG
collection date
not provided
completeness score
90.64
completeness software
checkm2 0.1.3
contamination score
0.62
environmental medium
not provided
geographic location (country and/or sea)
Tanzania
geographic location (latitude)
missing: third party data
geographic location (longitude)
missing: third party data
investigation type
metagenome-assembled genome
isolation_source
human gut metagenome
local environmental context
human gut
metagenomic source
human gut metagenome
project name
Stool samples of a cohort of individuals from Tanzania (Korogwe District). Samples weresequenced with Illumina HiSeq 2500 using NexteraXT library preparation.
sample derived from
SAMN11283214
sample name
spire_mag_00430195
scientific_name
Bacteroides uniformis
sequencing method
Illumina HiSeq 2500
taxonomic identity marker
multi-marker approach