Bacteroides uniformis
ENA first public
2024-09-21
INSDC center name
EMBL Heidelberg
INSDC status
public
Submitter Id
spire_mag_01938413
assembly quality
Many fragments with little to no review of assembly other than reporting of standard assembly statistics
assembly software
megahit 1.2.9
binning parameters
default
binning software
metabat 2.12.1
broad-scale environmental context
human digestive system
broker name
EBI-EMG
collection date
2012-06-08
completeness score
70.58
completeness software
checkm2 0.1.3
contamination score
0.89
environmental medium
not provided
geographic location (country and/or sea)
USA
geographic location (latitude)
42.24000000
geographic location (longitude)
-71.22000000
investigation type
metagenome-assembled genome
isolation_source
human gut metagenome
local environmental context
human gut
metagenomic source
human gut metagenome
project name
Study to determine microbial indices predicting acquisition of multidrug-resistant organisms
sample derived from
SAMN11391626
sample name
spire_mag_01938413
scientific_name
Bacteroides uniformis
sequencing method
Illumina MiSeq
taxonomic identity marker
multi-marker approach