skin metagenome
collection_date
2015-07-28
env_broad_scale
anthropogenic environment [ENVO_01000313]
env_local_scale
vivarium [ENVO_00010622]
env_medium
zone of skin [UBERON_0000014]
geo_loc_name
USA: San Francisco, California - San Francisco Zoo
host
Rana sierrae
lat_lon
not collected
collection_method
swab
host_common_name
Sierra Nevada yellow-legged frog
host_life_stage
adult
host_sex
female
host_subject_id
Tahoe163
host_tissue_sampled
skin
samp_mat_process
16S rRNA gene amplicon sequencing (V3-V4)
samp_store_temp
-80 °C
sample_id
SLG010.06
sample_category
frog
sample_type
inner forelimbs
host_pit_tag_id
900043000104870
host_SVL_mm
46.36
host_weight_g
9.5
host_Bd_status
negative
enclosure_id
Tahoe1:Tank3
sterile_rinse_pre_collection
Yes
DNA_extraction_kit_id
2
forward_primer_sequence
CCTACGGGNGGCWGCAG
reverse_primer_sequence
GACTACHVGGGTATCTAATCC
BioSampleModel
MIMARKS.survey
BioSampleModel
MIGS/MIMS/MIMARKS.host-associated