Bacteroides uniformis
ENA first public
2024-09-21
INSDC center name
EMBL Heidelberg
INSDC status
public
Submitter Id
spire_mag_02576513
assembly quality
Many fragments with little to no review of assembly other than reporting of standard assembly statistics
assembly software
megahit 1.2.9
binning parameters
default
binning software
metabat 2.12.1
broad-scale environmental context
human digestive system
broker name
EBI-EMG
collection date
2012-11/2013-11
completeness score
70.58
completeness software
checkm2 0.1.3
contamination score
2.54
environmental medium
not provided
geographic location (country and/or sea)
Netherlands
geographic location (latitude)
52.36760000
geographic location (longitude)
4.90410000
investigation type
metagenome-assembled genome
isolation_source
human gut metagenome
local environmental context
human gut
metagenomic source
human gut metagenome
project name
Understand effects of travel on the gut resistome.
sample derived from
SAMN17171587
sample name
spire_mag_02576513
scientific_name
Bacteroides uniformis
sequencing method
NextSeq 500
taxonomic identity marker
multi-marker approach