This sample represents a MAG derived from the metagenomic sample SAMN17312201
Senegalimassilia sp.
ENA-FIRST-PUBLIC
2023-11-07T00:47:15Z
ENA-LAST-UPDATE
2023-11-07T00:47:15Z
External Id
SAMEA114582842
INSDC center name
ICMB
INSDC first public
2023-11-07T00:47:15Z
INSDC last update
2023-11-07T00:47:15Z
INSDC status
public
Submitter Id
G02622-L1_cleanbin_000016
assembly quality
Many fragments with little to no review of assembly other than reporting of standard assembly statistics
assembly software
spades
binning parameters
refined binning from maxbin2 metabat2 vamb and concoct
binning software
MAGSCoT
broad-scale environmental context
hominid body
collection date
2004/2008
completeness score
95
completeness software
MAGSCoT
contamination score
1.67
contamination software
MAGSCoT
environmental medium
feces
geographic location (country and/or sea)
Uganda
geographic location (latitude)
not collected
geographic location (longitude)
not collected
investigation type
metagenome-assembled genome
isolation_source
Feces of Pan troglodytes schweinfurthii
local environmental context
hominid gut
metagenomic source
Pan troglodytes gut
sample derived from
SAMN17312201
sample name
G02622-L1_cleanbin_000016
scientific_name
Senegalimassilia sp.
taxonomic classification
gtdtbk
taxonomic identity marker
gtdtbtk marker gene sets