PMI3 Spring; 14989.skin.hip.CMU.16.03.2016.3.day10
human skin metagenome
11271.skin.hip.CMU.16.03.2016.3.day10
ENA-FIRST-PUBLIC
2023-05-27
ENA-LAST-UPDATE
2023-05-27
External Id
SAMEA113554948
INSDC center alias
UCSDMI
INSDC center name
University of California San Diego Microbiome Initiative
INSDC first public
2023-05-27T04:22:50Z
INSDC last update
2023-05-27T04:22:50Z
INSDC status
public
Submitter Id
qiita_sid_14989:14989.skin.hip.CMU.16.03.2016.3.day10
add_0c
90
add_4c
46.3
add_5c
37.3
add_6c
28.95
age
67
approximate_age
67
autopsy
n
cause_of_death
heart attack
collection_timestamp
2016-04-25 00:00
country
usa
date_of_death
2/25/16
days_since_placement
9
description_plate_well
metcalf_pmi_plate1_25304_d7
dna_extracted
TRUE
dna_extraction_plate
1
donor_storage
y
donor_storage_days
1
elevation
1397
empo_1
Host-associated
empo_2
Animal
empo_3
Animal surface
env_biome
dense settlement biome
env_feature
research facility
env_material
sebum
env_package
human-skin
geo_loc_name
USA:CO
host scientific name
homo_sapiens
host_age
67
host_age_units
years
host_body_habitat
UBERON:skin
host_body_mass_index
not provided
host_body_product
UBERON:sebum
host_body_site
UBERON:skin of body
host_body_site_user
skin.hip
host_common_name
human
host_height
172
host_height_units
cm
host_subject_id
cmu_mrs._16_03
host_taxid
9606
host_weight
143
host_weight_units
kg
humidity_min
18.7
humidty_max
48.2
in_prep
skin.hip.cmu.16.03.2016.3.day10
initial_body_condition
clothes removed; livor mortis on posterior half of body, head, and shoulders resulting in red discoloration; blood/purge coming from nose
interval
spring
latitude
39.08
longitude
-108.55
maggots
n
megyesi_score
11
old_add_0c
82.48
old_add_4c
46.3
old_add_5c
37.3
old_add_6c
28.95
old_temp_c_average
7.88
old_temp_c_max
15.34
old_temp_c_min
-0.12
physical_specimen_location
CSU
physical_specimen_remaining
FALSE
sample name
qiita_sid_14989:14989.skin.hip.CMU.16.03.2016.3.day10
sample_collection_date
3/19/16
sample_template
skin.hip.cmu.16.03.2016.3.day10
sample_type
skin
sample_type_soil_control
skin
scavenging_activity
n
scientific_name
human skin metagenome
sex
female
soil_add_0c
94.63
soil_add_4c
58.63
soil_add_5c
49.63
soil_add_6c
40.63
soil_control
n
swab_barcode1
25304
swab_barcode2
25305
temp_c_average
7.777777778
temp_c_max
13.88888889
temp_c_min
1.666666667
tot_mass
143