173 oyster digestive tissue RNA metatrascriptomic viromic sequencing data from 2016 to 2017
oyster metagenome
To understand RNA virus transmission in intertidal mollusks, we performed a comprehensive meta-transcriptome analysis of 173 M. gigas samples from the East China Sea, and compared the viral sequences to the meta-transcriptomes of other mollusks and seawater (i.e., the oyster C. hongkongensis, bivalves, gastropods, cephalopods, and Yangshan Harbor) through RdRP identification and reads mapping.
host
Magallana gigas
isolation_source
Magallana gigas digestive tissue
collection_date
2016-06-22/2017-07-13
geo_loc_name
China: Shanghai
lat_lon
30.85 N 121.85 E
BioSampleModel
Metagenome or environmental