Metagenome-Assembled Genome: ERR10960842_bin.7_MetaWRAP_v1.3_MAG
uncultured Dialister sp.
This sample represents a Third Party Annotation (TPA) metagenome-assembled genome assembled from the metagenomic run ERR10960842 of study ERP137488.
assembly software
metaspades v3.15.3
broad-scale environmental context
Human digestive system
collection date
2018
sample derived from
SAMEA112710889
geographic location (longitude)
37.910405
binning parameters
MaxBin2, MetaBat2, Concoct with default parameter of the metaWRAP pipeline. Bin refinement module used from metaWRAP with default parameters.
contamination score
0.0
taxonomic classification
The taxonomy of this Metagenome-Assembled Genome was originally computed with GTDBtk, which assigned the following taxonomic annotation: d__Bacteria;p__Firmicutes;c__Negativicutes;o__Veillonellales;f__Veillonellaceae;g__Allisonella;s__
ENA-FIRST-PUBLIC
2023-07-13T16:22:54Z
ENA-LAST-UPDATE
2023-07-13T16:22:54Z
completeness software
CheckM
geographic location (country and/or sea)
Kenya
binning software
MetaWRAP v1.3
organism
uncultured Allisonella sp.
assembly quality
Many fragments with little to no review of assembly other than reporting of standard assembly statistics
taxonomic identity marker
multi-marker approach
completeness score
78.86
environmental medium
faeces
geographic location (latitude)
-0.023636
scientific_name
uncultured Allisonella sp.
common name
investigation type
metagenome-assembled genome
local environmental context
colon
metagenomic source
human feces metagenome
project name
Shotgun metagenomics from Kenyan infants
sequencing method
Illumina NovaSeq 6000
isolation_source
human feces metagenome
ENA-FIRST-PUBLIC
2023-07-13
ENA-LAST-UPDATE
2023-07-13