14989.skin.hip.CMU.16.05.2016.mo.day1; PMI3 Spring
human skin metagenome
11271.skin.hip.CMU.16.05.2016.mo.day1
ENA-FIRST-PUBLIC
2023-05-27
ENA-LAST-UPDATE
2023-05-27
External Id
SAMEA113554985
INSDC center alias
UCSDMI
INSDC center name
University of California San Diego Microbiome Initiative
INSDC first public
2023-05-27T04:22:52Z
INSDC last update
2023-05-27T04:22:52Z
INSDC status
public
Submitter Id
qiita_sid_14989:14989.skin.hip.CMU.16.05.2016.mo.day1
add_0c
12.22222222
add_4c
0
add_5c
0
add_6c
0
age
72
approximate_age
72
autopsy
n
cause_of_death
cardiovascular disease
collection_timestamp
2016-10-07 00:00
country
usa
date_of_death
3/23/16
days_since_placement
0
description_plate_well
metcalf_pmi_plate1_25720_a9
dna_extracted
TRUE
dna_extraction_plate
1
donor_storage
y
donor_storage_days
3
elevation
1397
empo_1
Host-associated
empo_2
Animal
empo_3
Animal surface
env_biome
dense settlement biome
env_feature
research facility
env_material
sebum
env_package
human-skin
geo_loc_name
USA:CO
host scientific name
homo_sapiens
host_age
72
host_age_units
years
host_body_habitat
UBERON:skin
host_body_mass_index
not provided
host_body_product
UBERON:sebum
host_body_site
UBERON:skin of body
host_body_site_user
skin.hip
host_common_name
human
host_height
163
host_height_units
cm
host_subject_id
cmu_mrs._16_05
host_taxid
9606
host_weight
85
host_weight_units
kg
humidity_min
15.2
humidty_max
41.3
in_prep
skin.hip.cmu.16.05.2016.mo.day1
initial_body_condition
hospital apparel removed; livor mortis on posterior half of body, head, and arms resulting in red discoloration; hernia like protrusion from lower abdomen
interval
spring
latitude
39.08
longitude
-108.55
maggots
n
megyesi_score
7
old_add_0c
0
old_add_4c
0
old_add_5c
0
old_add_6c
0
old_temp_c_average
12.78
old_temp_c_max
18.77
old_temp_c_min
4.48
physical_specimen_location
CSU
physical_specimen_remaining
FALSE
sample name
qiita_sid_14989:14989.skin.hip.CMU.16.05.2016.mo.day1
sample_collection_date
3/28/16
sample_template
skin.hip.cmu.16.05.2016.mo.day1
sample_type
skin
sample_type_soil_control
skin
scavenging_activity
n
scientific_name
human skin metagenome
sex
female
soil_add_0c
0
soil_add_4c
0
soil_add_5c
0
soil_add_6c
0
soil_control
n
swab_barcode1
25720
swab_barcode2
25721
temp_c_average
12.22222222
temp_c_max
18.88888889
temp_c_min
5.555555556
tot_mass
85