14989.skin.hip.CMU.16.04.2016.mo.day2; PMI3 Spring
human skin metagenome
11271.skin.hip.CMU.16.04.2016.mo.day2
ENA-FIRST-PUBLIC
2023-05-27
ENA-LAST-UPDATE
2023-05-27
External Id
SAMEA113554978
INSDC center alias
UCSDMI
INSDC center name
University of California San Diego Microbiome Initiative
INSDC first public
2023-05-27T04:22:51Z
INSDC last update
2023-05-27T04:22:51Z
INSDC status
public
Submitter Id
qiita_sid_14989:14989.skin.hip.CMU.16.04.2016.mo.day2
add_0c
14.72222222
add_4c
3.61
add_5c
2.61
add_6c
1.61
age
97
approximate_age
97
autopsy
n
cause_of_death
congestive heart failure
collection_timestamp
2016-06-29 00:00
country
usa
date_of_death
3/16/16
days_since_placement
1
description_plate_well
metcalf_pmi_plate4_25432_a1
dna_extracted
TRUE
dna_extraction_plate
4
donor_storage
y
donor_storage_days
2
elevation
1397
empo_1
Host-associated
empo_2
Animal
empo_3
Animal surface
env_biome
dense settlement biome
env_feature
research facility
env_material
sebum
env_package
human-skin
geo_loc_name
USA:CO
host scientific name
homo_sapiens
host_age
97
host_age_units
years
host_body_habitat
UBERON:skin
host_body_mass_index
not provided
host_body_product
UBERON:sebum
host_body_site
UBERON:skin of body
host_body_site_user
skin.hip
host_common_name
human
host_height
184
host_height_units
cm
host_subject_id
cmu_mr._16_04
host_taxid
9606
host_weight
84
host_weight_units
kg
humidity_min
18.7
humidty_max
48.2
in_prep
skin.hip.cmu.16.04.2016.mo.day2
initial_body_condition
hospital apparel removed; livor mortis on posterior half of body and arms resulting in red to dark red discoloration; blood/medical purge coming from mouth; skin extremely thin
interval
spring
latitude
39.08
longitude
-108.55
maggots
n
megyesi_score
5
old_add_0c
7.88
old_add_4c
3.61
old_add_5c
2.61
old_add_6c
1.61
old_temp_c_average
7.88
old_temp_c_max
15.34
old_temp_c_min
-0.12
physical_specimen_location
CSU
physical_specimen_remaining
FALSE
sample name
qiita_sid_14989:14989.skin.hip.CMU.16.04.2016.mo.day2
sample_collection_date
3/19/16
sample_template
skin.hip.cmu.16.04.2016.mo.day2
sample_type
skin
sample_type_soil_control
skin
scavenging_activity
n
scientific_name
human skin metagenome
sex
male
soil_add_0c
10.39
soil_add_4c
6.39
soil_add_5c
5.39
soil_add_6c
4.39
soil_control
n
swab_barcode1
25432
swab_barcode2
25433
temp_c_average
7.777777778
temp_c_max
13.88888889
temp_c_min
1.666666667
tot_mass
84