ITS Hordeum comosum rhizosphere
metagenome
rhizosphere sample took from individual Hordeum comosum plant.
collection_date
2015-01
depth
0 - 0.15
elev
848
env_broad_scale
Mineral
env_local_scale
Soil
env_medium
Rhizosphere
organism_type
Fungi
geo_loc_name
Argentina
lat_lon
44.07 S 70.93416667 W
host_common_name
cebada patagónica
host_latin_name
Hordeum comosum
animal_gut
No
sequencing_platform
Illumina MiSeq
dna_extraction_method
MoBio PowerPlant DNA isolation kit
dna_extraction_amount
223 mgr
altitude
848
annual_season_precpt
291
annual_season_temp
7.233333333
cur_land_use
shrub land (e.g. mesquite,sage-brush,creosote bush,shrub oak,eucalyptus)
horizon
A horizon
isolation_source
rhizosphere
link_class_info
https://geo-backend.inta.gob.ar/catalogue/#/dataset/230
ph
6.13
ph_meth
1:2.5; soil: distilled water
pool_dna_extracts
no
samp_collect_device
shovel
samp_mat_process
air drying
samp_size
223 mgr
sieving
2 mm
size_frac
2 mm
source_material_id
CC066
store_cond
dry, room temperature; 13 months.
tot_n_meth
elemental analyzer (NA 1110; Carlo Erba Instruments)
tot_nitro
0.04
tot_org_c_meth
elemental analyzer (NA 1110; Carlo Erba Instruments)
tot_org_carb
0.56
annual_season_precpt_source
Wordclim (1950-2000 mean annual precpt. in mm.)
annual_season_temp_source
Wordclim (1950-2000 mean annual temp in °C)
PETWorldClim
924.27
TmaxWorldClim
12.89166667
TminWorldClim
1.633333333
Epichloe_presence
1
Veg_cover_perc
50
Veg_cover_perc_method
rectangular plots (50 m2) at each site
Clay_perc
1.9
Silt_perc
11.62
Sand_perc
86.48
Herbivory
Intense
Gram_cover_perc
25
Shrub_cover_perc
25
H_comosum_cover_perc
1
water_retention_capacity_perc
5.358
water_retention_capacity_method
estimated from the granulometry (sand, silt, clay) and carbon
BioSampleModel
MIMARKS.survey
BioSampleModel
MIGS/MIMS/MIMARKS.soil