ABG37
feces metagenome
Animal-derived sample for hologenomic analyses
ENA first public
2024-10-31
External Id
SAMEA111531769
INSDC center name
Earth Hologenome Iniatiative
INSDC last update
2022-10-31T12:26:24Z
INSDC status
public
SUBMISSION_TOOL
ena-upload-cli
SUBMISSION_TOOL_VERSION
0.5.3
Submitter Id
ABG37
adapters
AGATCGGAAGAGCACACGTCTGAACTCCAGTCA AGATCGGAAGAGCGTCGTGTAGGGAAAGAGTGT
broad-scale environmental context
1000221 - Temperate woodland
collection date
2021-03-04
environmental medium
animal
geographic location (country and/or sea)
USA
geographic location (latitude)
36.00
geographic location (longitude)
-78.94
host body product
Anal/cloacal swab
host common name
Eastern grey squirrel
host length
62.0
host subject id
SD00681
host taxid
30640
host total mass
600.0
host-associated environmental package
host-associated
investigation type
metagenome
local environmental context
small forest patch on Duke university campus
project name
Sciurus carolinensis
sample name
ABG37
sample storage location
EHI laboratory University of Copenhagen
sample storage temperature
-20
scientific_name
feces metagenome
sequencing method
Illumina NovaSeq 6000 S4 150PE