PMI3 Spring; 14989.skin.hip.CMU.16.03.2016.3.day13
human skin metagenome
11271.skin.hip.CMU.16.03.2016.3.day13
ENA-FIRST-PUBLIC
2023-05-27
ENA-LAST-UPDATE
2023-05-27
External Id
SAMEA113554951
INSDC center alias
UCSDMI
INSDC center name
University of California San Diego Microbiome Initiative
INSDC first public
2023-05-27T04:22:50Z
INSDC last update
2023-05-27T04:22:50Z
INSDC status
public
Submitter Id
qiita_sid_14989:14989.skin.hip.CMU.16.03.2016.3.day13
add_0c
122.2222222
add_4c
68.4
add_5c
56.4
add_6c
45.05
age
67
approximate_age
67
autopsy
n
cause_of_death
heart attack
collection_timestamp
2016-05-10 00:00
country
usa
date_of_death
2/25/16
days_since_placement
12
description_plate_well
metcalf_pmi_plate1_25326_e5
dna_extracted
TRUE
dna_extraction_plate
1
donor_storage
y
donor_storage_days
1
elevation
1397
empo_1
Host-associated
empo_2
Animal
empo_3
Animal surface
env_biome
dense settlement biome
env_feature
research facility
env_material
sebum
env_package
human-skin
geo_loc_name
USA:CO
host scientific name
homo_sapiens
host_age
67
host_age_units
years
host_body_habitat
UBERON:skin
host_body_mass_index
not provided
host_body_product
UBERON:sebum
host_body_site
UBERON:skin of body
host_body_site_user
skin.hip
host_common_name
human
host_height
172
host_height_units
cm
host_subject_id
cmu_mrs._16_03
host_taxid
9606
host_weight
143
host_weight_units
kg
humidity_min
11.4
humidty_max
86.2
in_prep
skin.hip.cmu.16.03.2016.3.day13
initial_body_condition
clothes removed; livor mortis on posterior half of body, head, and shoulders resulting in red discoloration; blood/purge coming from nose
interval
spring
latitude
39.08
longitude
-108.55
maggots
y
megyesi_score
12
old_add_0c
118.07
old_add_4c
68.4
old_add_5c
56.4
old_add_6c
45.05
old_temp_c_average
13.75
old_temp_c_max
21.22
old_temp_c_min
1.18
physical_specimen_location
CSU
physical_specimen_remaining
FALSE
sample name
qiita_sid_14989:14989.skin.hip.CMU.16.03.2016.3.day13
sample_collection_date
3/22/16
sample_template
skin.hip.cmu.16.03.2016.3.day13
sample_type
skin
sample_type_soil_control
skin
scavenging_activity
n
scientific_name
human skin metagenome
sex
female
soil_add_0c
129.74
soil_add_4c
81.74
soil_add_5c
69.74
soil_add_6c
57.74
soil_control
n
swab_barcode1
25326
swab_barcode2
25327
temp_c_average
10.27777778
temp_c_max
20.55555556
temp_c_min
0
tot_mass
143