uncultured Nitrosomonadales bacterium
This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run ERR7163067 of study ERP132647.
ENA first public
2024-04-04
External Id
SAMEA115172002
INSDC center name
EMG
INSDC last update
2024-02-01T16:07:06Z
INSDC status
public
Submitter Id
ERR7163067_concoct_67
assembly quality
Many fragments with little to no review of assembly other than reporting of standard assembly statistics
assembly software
metaspades_v3.15.3
binning parameters
default
binning software
MGnify-genomes-generation-pipeline_v1.0.0
broad-scale environmental context
aquatic
broker name
EBI-EMG
collection date
2015-02-23
completeness score
96.35
completeness software
CheckM2_v1.0.1
contamination score
0.0
environmental medium
aquaculture
geographic location (country and/or sea)
South Korea
geographic location (latitude)
34.40783333
geographic location (longitude)
126.3449722
investigation type
metagenome-assembled genome
isolation_source
aquaculture metagenome
local environmental context
marine
metagenomic source
aquaculture metagenome
project name
Illumina HiSeq 4000 paired end sequencing
sample derived from
SAMEA10031318
sample name
ERR7163067_concoct_67
scientific_name
uncultured Nitrosomonadales bacterium
sequencing method
Illumina HiSeq 4000
taxonomic identity marker
multi-marker approach