Gammaproteobacteria bacterium
16S recovered
No
16S recovery software
PROKKA (version 1.14.6)
ENA first public
2020-01-01
GAL
Queen Mary University of London
GAL_sample_id
NOT PROVIDED
INSDC center name
Tree of Life Programme
INSDC status
public
MAG coverage software
Minimap2 (version 2.24-r1122)
Submitter Id
7fc13441-917d-40fc-bc6e-8ce60f4de2d3
assembly quality
Many fragments with little to no review of assembly other than reporting of standard assembly statistics
assembly software
metaMDBG (version 0.3)
binning parameters
coverage; graph
binning software
MetaBat (version 2.15); DASTOOL (version 1.1.5)
broad-scale environmental context
aquatic biome
collected_by
AINA BØRVE
collecting institution
UNIVERSITY OF BERGEN
collection date
2022-09-13
completeness score
51.36
completeness software
checkM (version 1.2.2); checkM_DB (release 2015-01-16)
contamination score
0.0
depth
250
environmental medium
adult gastropod tissue
geographic location (country and/or sea)
Norway
geographic location (latitude)
not collected
geographic location (longitude)
not collected
geographic location (region and locality)
Vestland | Hjeltefjorden
habitat
Gut of host Parastichopus tremulus.
host life stage
adult
host scientific name
Enteroxenos oestergreni
host sex
not collected
host taxid
3119528
identified_by
AINA BØRVE
identifier_affiliation
UNIVERSITY OF BERGEN
investigation type
metagenome-assembled genome
isolation_source
Gastropod: Enteroxenos oestergreni
local environmental context
marine biome
metagenomic source
mollusc metagenome
number of standard tRNAs extracted
18
organism part
WHOLE ORGANISM
project name
ToL
relationship
parasitic
sample derived from
SAMEA117959528
sample name
7fc13441-917d-40fc-bc6e-8ce60f4de2d3
scientific_name
Gammaproteobacteria bacterium
sequencing method
Pacbio Sequel II
specimen_id
QMOUL0000313
specimen_voucher
no
symbiont
N
tRNA extraction software
PROKKA (version 1.14.6)
taxonomic classification
GTDB-TK (version 2.4.0); GTDB (release 214)
taxonomic identity marker
taxonomic novelty determined using RED
tolid
xgEntOest1.Gammaproteobacteria_2