uncultured Cafeteriaceae
This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run ERR7163067 of study ERP132647.
assembly software
metaspades_v3.15.3
binning software
MGnify-genomes-generation-pipeline_v1.0.0
organism
uncultured Cafeteriaceae
broad-scale environmental context
aquatic
assembly quality
Many fragments with little to no review of assembly other than reporting of standard assembly statistics
collection date
2015-02-23
sample derived from
SAMEA10031318
geographic location (longitude)
126.34497222
taxonomic identity marker
multi-marker approach
binning parameters
default
completeness score
79.56
contamination score
3.31
environmental medium
aquaculture
geographic location (latitude)
34.40783333
scientific_name
uncultured Cafeteriaceae
investigation type
metagenome-assembled genome
local environmental context
marine
metagenomic source
aquaculture metagenome
project name
whole metagenomic sequencing for marine aquaculture microbiomes collected from Jindo, Tongyeong, and Wando, Korea
sequencing method
Illumina HiSeq 4000
completeness software
EukCC_v2.1.0
geographic location (country and/or sea)
South Korea
isolation_source
aquaculture metagenome