vaginal metagenome
ENA-FIRST-PUBLIC
2023-05-04T16:18:25Z
ENA-LAST-UPDATE
2023-05-04T16:18:25Z
External Id
SAMEA112858139
INSDC center name
Centre for Translational Microbiome Research (CTMR)
INSDC first public
2023-05-04T16:18:25Z
INSDC last update
2023-05-04T16:18:25Z
INSDC status
public
Submitter Id
subject60_day8
antibiotics past 3 months
no
birth control
levonorgestrel intra-uterine system
broad-scale environmental context
vagina
collection date
2017-09-28
douche
twice weekly
drinking habits
light
environmental medium
vaginal swab
geographic location (country and/or sea)
Denmark
geographic location (latitude)
55.67
geographic location (longitude)
12.57
host age
24
host body product
vaginal mucus
host body site
vagina
host body-mass index
21.5
host subject id
60
local environmental context
mid fornix
pregnancy
no
project name
MiMens
sample collection device
FLOQSwab (COPAN diagnostics)
sample collection method
Swab
sample name
subject60_day8
sample storage medium
DNA/RNA-shield (Zymo Research)
sample storage temperature
'-20 / -80
scientific_name
vaginal metagenome
sequencing method
MGISeq PE150
smoking status
never