Pirellulales bacterium
16S recovery software
PROKKA (version 1.14.6)
16s recovered
Yes
ENA first public
2020-01-01
GAL
Geomar Helmholtz Centre
GAL_sample_id
NOT PROVIDED
INSDC center name
Tree of Life Programme
INSDC status
public
MAG coverage software
Minimap2 (version 2.24-r1122)
Submitter Id
3c618e28-dd74-4590-89e6-864ea108aa3e
assembly quality
Many fragments with little to no review of assembly other than reporting of standard assembly statistics
assembly software
metaMDBG (version 0.3)
binning parameters
coverage; graph
binning software
MAGScoT (version 1.0.0); MetaBat (version 2.15); MaxBin (version 2.2.7)
broad-scale environmental context
aquatic biome
collected_by
SALLY LEYS
collecting institution
University of Alberta
collection date
2024-04-02
completeness score
97.63
completeness software
checkM (version 1.2.2); checkM_DB (release 2015-01-16)
contamination score
7.03
depth
15
environmental medium
adult sponge tissue
geographic location (country and/or sea)
Canada
geographic location (latitude)
48.83
geographic location (longitude)
-125.14
geographic location (region and locality)
BRITISH COLUMBIA | BAMFIELD | BAMFIELD MARINE SCIENCES CENTRE
habitat
SUBTIDAL ROCK EXPOSED
host life stage
adult
host scientific name
Tethya californiana
host sex
not collected
host taxid
283519
identified_by
SALLY LEYS
identifier_affiliation
University of Alberta
investigation type
metagenome-assembled genome
isolation_source
Sponge: Tethya californiana
local environmental context
marine biome
metagenomic source
sponge metagenome
number of standard tRNAs extracted
47
organism part
WHOLE ORGANISM
project name
ASG
sample derived from
SAMEA117791284
sample name
3c618e28-dd74-4590-89e6-864ea108aa3e
scientific_name
Pirellulales bacterium
sequencing method
Pacbio Sequel II
specimen_id
GHC0000350
specimen_voucher
NOT PROVIDED
symbiont
N
tRNA extraction software
PROKKA (version 1.14.6)
taxonomic classification
GTDB-TK (version 2.4.0); GTDB (release 214)
taxonomic identity marker
ani_screen
tolid
odTetCali1.Pirellulales_1