vaginal metagenome
ENA-FIRST-PUBLIC
2023-05-04T16:18:30Z
ENA-LAST-UPDATE
2023-05-04T16:18:30Z
External Id
SAMEA112858245
INSDC center name
Centre for Translational Microbiome Research (CTMR)
INSDC first public
2023-05-04T16:18:30Z
INSDC last update
2023-05-04T16:18:30Z
INSDC status
public
Submitter Id
subject77_day6
antibiotics past 3 months
no
birth control
non-hormonal
broad-scale environmental context
vagina
collection date
2017-11-27
douche
never
drinking habits
light
environmental medium
vaginal swab
geographic location (country and/or sea)
Denmark
geographic location (latitude)
55.67
geographic location (longitude)
12.57
host age
23
host body product
vaginal mucus
host body site
vagina
host body-mass index
22.7
host subject id
77
local environmental context
mid fornix
menstrual hygiene product
tampon, pad
pregnancy
no
project name
MiMens
sample collection device
FLOQSwab (COPAN diagnostics)
sample collection method
Swab
sample name
subject77_day6
sample storage medium
DNA/RNA-shield (Zymo Research)
sample storage temperature
'-20 / -80
scientific_name
vaginal metagenome
sequencing method
MGISeq PE150
smoking status
former