Metagenome-assembled genome: SRR6194934_binner13_Refined_19
uncultured Phycisphaerae bacterium
ENA first public
2025-06-17
INSDC center name
EMG
INSDC status
public
Submitter Id
SRR6194934_binner13_Refined_19
assembly quality
Many fragments with little to no review of assembly other than reporting of standard assembly statistics
assembly software
metaspades_v3.12.0
binning parameters
default
binning software
MGnify-genomes-generation-pipeline_v1.0.0
broad-scale environmental context
marine
broker name
EBI-EMG
collection date
2011-12-05
completeness score
90.81
completeness software
CheckM2_v1.0.1
contamination score
2.21
environmental medium
marine sediment
geographic location (country and/or sea)
USA
geographic location (latitude)
37.56901700
geographic location (longitude)
-122.10243300
investigation type
metagenome-assembled genome
isolation_source
sediment metagenome
local environmental context
pond two c
metagenomic source
sediment metagenome
project name
Marine sediment microbial community from Union City, CA, USA - Pond 2C Sediment 2 metagenome
sample derived from
SAMN06268912
sample name
SRR6194934_binner13_Refined_19
scientific_name
uncultured Phycisphaerae bacterium
sequencing method
Illumina HiSeq 2000
taxonomic identity marker
multi-marker approach