J01S2022
soil metagenome
ENA first public
2025-06-01
INSDC center name
JYU
INSDC status
public
Submitter Id
J01S
broad-scale environmental context
subalpine biome [ENVO_01001837]
collection date
2022-07-02
depth
5cm
elevation
678
environmental medium
soil layer top depth [ENVO_6105225]
geographic location (country and/or sea)
Norway
geographic location (latitude)
69.05538
geographic location (longitude)
20.808155
local environmental context
soil environment [ENVO_01001044]
pcr primers
fITS7-miseq;TCGTCGGCAGCGTCAGATGTGTATAAGAGACAGGTGARTCATCGAATCTTTG;fITS7-miseq2;TCGTCGGCAGCGTCAGATGTGTATAAGAGACAGCGTGARTCATCGAATCTTTG;fITS7-miseq3;TCGTCGGCAGCGTCAGATGTGTATAAGAGACAGACGTGARTCATCGAATCTTTG;fITS7-miseq4;TCGTCGGCAGCGTCAGATGTGTATAAGAGACAGTACGTGARTCATCGAATCTTTG;ITS4-miseq ;GTCTCGTGGGCTCGGAGATGTGTATAAGAGACAGTCCTCCGCTTATTGATATGC;ITS4-miseq2;GTCTCGTGGGCTCGGAGATGTGTATAAGAGACAGATCCTCCGCTTATTGATATGC;ITS4-miseq3;GTCTCGTGGGCTCGGAGATGTGTATAAGAGACAGGATCCTCCGCTTATTGATATGC;ITS4-miseq6;GTCTCGTGGGCTCGGAGATGTGTATAAGAGACAGTGAGATCCTCCGCTTATTGATATGC;ITS4-miseq7;GTCTCGTGGGCTCGGAGATGTGTATAAGAGACAGCTGAGATCCTCCGCTTATTGATATGC;ITS4-miseq8;GTCTCGTGGGCTCGGAGATGTGTATAAGAGACAGCCTGAGATCCTCCGCTTATTGATATGC;ITS4A-miseq4;GTCTCGTGGGCTCGGAGATGTGTATAAGAGACAGAGATCCTCGCCTTATTGATATGC;ITS4A-miseq5;GTCTCGTGGGCTCGGAGATGTGTATAAGAGACAGGAGATCCTCGCCTTATTGATATGC
project name
Available and selected fungal communities of Bistorta vivipara
sample name
J01S
scientific_name
soil metagenome
seqrun
run5
target gene
ribosomal internal transcribed spacer
target subfragment
ITS2