14937.S00IE0057; sorghum soil with danforth
soil metagenome
ENA first public
2025-02-21
INSDC center name
UCSDMI
INSDC status
public
Submitter Id
qiita_sid_14937:14937.S00IE0057
anonymized_name
D5 517/518 60
asscension
P898012
collection date
2021-10-05
collection_timestamp
2021-10-05
country
USA
depth
0.6
depth_cm
60
dna_extracted
TRUE
elevation
135
empo_1
Free-living
empo_2
Free-living (non-saline)
empo_3
Solid (non-saline)
empo_4
Soil (non-saline)
env_biome
urban biome
env_feature
farmland soil
env_material
soil
env_package
soil
field
D5
genotype
PI 656057
geo_loc_name
USA:MO:StLouis
geo_origin
Purdue
geographic location (country and/or sea)
USA
host_subject_id
D5__517_518
host_subject_id_
D5__517_518
host_subject_id_2
D5__517_518 _60
host_subject_id_org
D5 517/518 60
latitude
38.8477
longitude
-90.68664
physical_specimen_location
Danforth
physical_specimen_remaining
FALSE
pi_number_genotype
PI656057
qiita_sample_type
soil
race
Caudatum
rationale
Grain NAM Parent, striga resistance, niger mini-NAM parent
refs
https://academic.oup.com/genetics/article/206/2/573/6064253?login=true ; https://onlinelibrary.wiley.com/doi/abs/10.1111/j.1439-0523.1992.tb00178.x
replication
1
root_mass_g
0.555
sample name
qiita_sid_14937:14937.S00IE0057
sample_id_1
D5 517_518 TOP DEPTHS
sample_type
soil
scientific_name
soil metagenome
sex
not applicable
soi_h2o_total_organic_c
56
soil_available_k
28.7
soil_available_n
45.7
soil_available_p
25.6
soil_b_depth
0
soil_beginning_depth
0
soil_calcium_ppm_ca
1184
soil_co2c
36.3
soil_composition
1
soil_composition_order
1
soil_copper_ppm_cu
1.81
soil_e_depth
24
soil_ending_depth
24
soil_h2o_organic_n
2.6
soil_h2o_total_n
7.8
soil_h3a_ammonium
2.1
soil_h3a_icap_aluminum
164
soil_h3a_icap_calcium
396
soil_h3a_icap_copper
0.85
soil_h3a_icap_iron
118
soil_h3a_icap_magnesium
44
soil_h3a_icap_manganese
10.8
soil_h3a_icap_potassium
24
soil_h3a_icap_sodium
18
soil_h3a_icap_sulfur
6.3
soil_h3a_icap_zinc
0.44
soil_h3a_inorganic_nitrogen
3.7
soil_h3a_inorganic_phosphorus
9
soil_h3a_nitrate
1.6
soil_h3a_organic_phosphorus
2.1
soil_h3a_total_phosphorus
11
soil_haney_test_n
45.7
soil_iron_ppm_fe
64.5
soil_lbs_n_a
20
soil_lbs_n_difference
34
soil_magnesium_ppm_mg
111
soil_manganese_ppm_mn
24.4
soil_n_savings
21.73
soil_nitrate_n_ppm_n
2.7
soil_nutrient_value
53.55
soil_olsen_p_ppm_p
8.8
soil_organic_c_to_n_ratio
21.4
soil_organic_n_release
2.6
soil_organic_n_reserve
0
soil_organic_n_to_inorganicn_ratio
0.7
soil_organic_p_release
2.1
soil_organic_p_reserve
< 0.1
soil_organicmatter
1.4
soil_percent_mac
64.4
soil_ph_1v1
5.3
soil_potassium_ppm_k
118
soil_sodium_ppm_na
20
soil_soil_health_calculation
5.02
soil_soluble_salt_1v1
0.1
soil_sulfate_s_ppm_s
9
soil_texture_no
2
soil_traditional_n
11.7
soil_wdrfbuffer
6.7
soil_zinc_ppm_zn
0.78
sorghum_type
Grain
sorghum_utilization
Grain
tube_id
NaN