Metagenome-assembled genome: ERR2931548_binner123_Refined_1
uncultured Rhodospirillaceae bacterium
ENA first public
2025-06-17
INSDC center name
EMG
INSDC status
public
Submitter Id
ERR2931548_binner123_Refined_1
assembly quality
Many fragments with little to no review of assembly other than reporting of standard assembly statistics
assembly software
metaspades_v3.15.3
binning parameters
default
binning software
MGnify-genomes-generation-pipeline_v1.0.0
broad-scale environmental context
marine
broker name
EBI-EMG
collection date
2017-03-20
completeness score
97.78
completeness software
CheckM2_v1.0.1
contamination score
0.0
environmental medium
marine sediment
geographic location (country and/or sea)
Italy
geographic location (latitude)
42.80840200
geographic location (longitude)
10.14196400
investigation type
metagenome-assembled genome
isolation_source
sediment metagenome
local environmental context
coastal
metagenomic source
sediment metagenome
project name
Paracatenuls is a genus of marine catenulid flatworms that is associated with intracellular alphaproteobacterial symbionts of the genus Ca. Riegeria. Hosts and symbionts have codiversified of hundreds of millions of years and each host species harbors a host-specific symbiont. This project generated a single worm metagenome from a specimen of Paracatenula sp. standrea from Sant'Andrea bay, Elba Italy.
sample derived from
SAMEA5137510
sample name
ERR2931548_binner123_Refined_1
scientific_name
uncultured Rhodospirillaceae bacterium
sequencing method
Illumina HiSeq 3000
taxonomic identity marker
multi-marker approach