Metagenome-assembled genome: SRR6193154_binner13_Refined_2
uncultured bacterium
ENA first public
2025-06-17
INSDC center name
EMG
INSDC status
public
Submitter Id
SRR6193154_binner13_Refined_2
assembly quality
Many fragments with little to no review of assembly other than reporting of standard assembly statistics
assembly software
metaspades_v3.12.0
binning parameters
default
binning software
MGnify-genomes-generation-pipeline_v1.0.0
broad-scale environmental context
marine
broker name
EBI-EMG
collection date
2011-12-16
completeness score
73.68
completeness software
CheckM2_v1.0.1
contamination score
3.48
environmental medium
marine sediment
geographic location (country and/or sea)
Puerto Rico
geographic location (latitude)
17.96725000
geographic location (longitude)
-67.01887330
investigation type
metagenome-assembled genome
isolation_source
sediment metagenome
local environmental context
prtt sediment three
metagenomic source
sediment metagenome
project name
Marine sediment microbial community from La Parguera, Puerto Rico - PR Tt Sediment 3 metagenome
sample derived from
SAMN06268954
sample name
SRR6193154_binner13_Refined_2
scientific_name
uncultured bacterium
sequencing method
Illumina HiSeq 2000
taxonomic identity marker
multi-marker approach