Metagenome-assembled genome: SRR26215688_concoct_142
uncultured Dehalococcoidia bacterium
ENA first public
2025-06-17
INSDC center name
EMG
INSDC status
public
Submitter Id
SRR26215688_concoct_142
assembly quality
Many fragments with little to no review of assembly other than reporting of standard assembly statistics
assembly software
metaspades_v3.15.5
binning parameters
default
binning software
MGnify-genomes-generation-pipeline_v1.0.0
broad-scale environmental context
marine
broker name
EBI-EMG
collection date
2020-03
completeness score
60.73
completeness software
CheckM2_v1.0.1
contamination score
1.01
environmental medium
marine sediment
geographic location (country and/or sea)
Denmark
geographic location (latitude)
56.06000000
geographic location (longitude)
10.27000000
investigation type
metagenome-assembled genome
isolation_source
sediment metagenome
local environmental context
sediment
metagenomic source
sediment metagenome
project name
Metagenome and metatranscriptome reads from sediments samples gathered from Aarhus Bay M5 station at 5, 10, 15, 20, 25, 30 and 35 cm below the seafloor and Thorarchaeia MAGs constructed from the metagenome reads.
sample derived from
SAMN37573262
sample name
SRR26215688_concoct_142
scientific_name
uncultured Dehalococcoidia bacterium
sequencing method
Illumina NovaSeq 6000
taxonomic identity marker
multi-marker approach