Metagenome-assembled genome: binchicken_co382_9
uncultured Alphaproteobacteria bacterium
This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic runs SRR7595001,SRR7595221,SRR8816671,SRR8816758 of study SRP114822.
ENA first public
2024-12-11
INSDC center name
CMR
INSDC status
public
Submitter Id
binchicken_co382_9
assembly quality
Many fragments with little to no review of assembly other than reporting of standard assembly statistics
assembly software
MEGAHIT;1.2.9;default
binning parameters
coverage and kmer
binning software
MetaBAT2;2.15;default
broad-scale environmental context
aquatic
collection date
not provided
completeness score
69.26
completeness software
CheckM2;1.0.2;default
contamination score
0.27
environmental medium
aquatic
geographic location (country and/or sea)
Australia
geographic location (latitude)
-33.990771
geographic location (longitude)
151.23245
investigation type
metagenome-assembled genome
isolation_source
marine metagenome
local environmental context
marine biome
metagenomic source
marine metagenome
project name
Marine amplicons from Australian marine (benthic and pelagic environments
sample derived from
SAMN08954292,SAMN08954282,SAMN08954292,SAMN08954282
sample name
binchicken_co382_9
scientific_name
uncultured Alphaproteobacteria bacterium
sequencing method
Illumina HiSeq 2500
taxonomic identity marker
multi-marker approach