Metagenome-assembled genome: SRP187154_co1_9
uncultured Sphaerobacteraceae bacterium
This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic runs SRR8648368,SRR8648371 of study SRP187154.
ENA first public
2024-12-11
INSDC center name
CMR
INSDC status
public
Submitter Id
SRP187154_co1_9
assembly quality
Many fragments with little to no review of assembly other than reporting of standard assembly statistics
assembly software
metaSPAdes;3.15.4;default
binning parameters
coverage and kmer
binning software
MetaBAT2;2.15;default
broad-scale environmental context
terrestrial
collection date
2017-08-17
completeness score
84.5
completeness software
CheckM2;1.0.2;default
contamination score
3.43
environmental medium
terrestrial
geographic location (country and/or sea)
not provided
geographic location (latitude)
not provided
geographic location (longitude)
not provided
investigation type
metagenome-assembled genome
isolation_source
soil metagenome
local environmental context
soil biome
metagenomic source
soil metagenome
project name
Metagenomic characterization of microbial fermentation bed system and ectopic fermentation system
sample derived from
SAMN11039013,SAMN11039016
sample name
SRP187154_co1_9
scientific_name
uncultured Sphaerobacteraceae bacterium
sequencing method
Illumina HiSeq 4000
taxonomic identity marker
multi-marker approach