Metagenome-assembled genome: binchicken_co32_483
uncultured Natronomonas sp.
This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic runs SRR9330139,SRR9330141 of study SRP201947.
ENA first public
2024-12-11
INSDC center name
CMR
INSDC status
public
Submitter Id
binchicken_co32_483
assembly quality
Many fragments with little to no review of assembly other than reporting of standard assembly statistics
assembly software
metaSPAdes;3.15.4;default
binning parameters
coverage and kmer
binning software
VAMB;3.0.2;default
broad-scale environmental context
aquatic
collection date
2017-07
completeness score
82.8
completeness software
CheckM2;1.0.2;default
contamination score
1.32
environmental medium
aquatic
geographic location (country and/or sea)
China
geographic location (latitude)
not provided
geographic location (longitude)
not provided
investigation type
metagenome-assembled genome
isolation_source
soda lake metagenome
local environmental context
soda lake biome
metagenomic source
soda lake metagenome
project name
Soda lake samples from Habor Lake and Hutong Qagan Lake (Inner Mongolia Autonomous Region, China) were collected and performed NGS sequencing to investigate the microbial community and uncultured functional microbes involved in carbon and sulfur cycle.
sample derived from
SAMN12097871,SAMN12097873
sample name
binchicken_co32_483
scientific_name
uncultured Natronomonas sp.
sequencing method
Illumina HiSeq 2000
taxonomic identity marker
multi-marker approach