Metagenome-assembled genome: SRP133034_co1_75
uncultured Pseudomonadales bacterium
This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic runs SRR6747781,SRR6747782 of study SRP133034.
ENA first public
2024-12-11
INSDC center name
CMR
INSDC status
public
Submitter Id
SRP133034_co1_75
assembly quality
Many fragments with little to no review of assembly other than reporting of standard assembly statistics
assembly software
metaSPAdes;3.15.4;default
binning parameters
coverage and kmer
binning software
MetaBAT2;2.15;default
broad-scale environmental context
engineered
collection date
2016-05-07
completeness score
85.66
completeness software
CheckM2;1.0.2;default
contamination score
2.64
environmental medium
engineered
geographic location (country and/or sea)
Hong Kong
geographic location (latitude)
22.511132
geographic location (longitude)
114.118591
investigation type
metagenome-assembled genome
isolation_source
activated sludge metagenome
local environmental context
activated sludge biome
metagenomic source
activated sludge metagenome
project name
Actiavted sludge samples collected from Shatin WWTP, Hong Kong
sample derived from
SAMN08389278,SAMN08389277
sample name
SRP133034_co1_75
scientific_name
uncultured Pseudomonadales bacterium
sequencing method
Illumina HiSeq 4000
taxonomic identity marker
multi-marker approach