Metagenome-assembled genome: SRP287453_co1_192
uncultured Nitrospira sp.
This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic runs SRR12830358,SRR12830359 of study SRP287453.
ENA first public
2024-12-11
INSDC center name
CMR
INSDC status
public
Submitter Id
SRP287453_co1_192
assembly quality
Many fragments with little to no review of assembly other than reporting of standard assembly statistics
assembly software
metaSPAdes;3.15.4;default
binning parameters
coverage and kmer
binning software
MetaBAT;2.15;default
broad-scale environmental context
engineered
collection date
not provided
completeness score
86.25
completeness software
CheckM2;1.0.2;default
contamination score
0.14
environmental medium
engineered
geographic location (country and/or sea)
not provided
geographic location (latitude)
not provided
geographic location (longitude)
not provided
investigation type
metagenome-assembled genome
isolation_source
bioreactor metagenome
local environmental context
bioreactor biome
metagenomic source
bioreactor metagenome
project name
Comammox was dominant in ammonia oxidizing microorganism.
sample derived from
SAMN16445485,SAMN16445484
sample name
SRP287453_co1_192
scientific_name
uncultured Nitrospira sp.
sequencing method
Illumina MiSeq
taxonomic identity marker
multi-marker approach