Metagenome-assembled genome: SRP292972_co3_129
uncultured Elusimicrobia bacterium
This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic runs SRR14271332,SRR14271336 of study SRP292972.
assembly software
metaSPAdes;3.15.4;default
binning software
VAMB;3.0.2;default
organism
uncultured Elusimicrobia bacterium
broad-scale environmental context
engineered
assembly quality
Multiple fragments where gaps span repetitive regions. Presence of the 23S, 16S, and 5S rRNA genes and at least 18 tRNAs
collection date
2016-08
sample derived from
SAMN18753105,SAMN18753101
geographic location (longitude)
-80.41
taxonomic identity marker
multi-marker approach
binning parameters
coverage and kmer
completeness score
96.32
contamination score
2.31
environmental medium
engineered
geographic location (latitude)
37.23
scientific_name
uncultured Elusimicrobia bacterium
investigation type
metagenome-assembled genome
local environmental context
bioreactor biome
metagenomic source
bioreactor metagenome
project name
Reclaiming wastewater treatment plant effluent for reuse is essential for achieving water sustainability. This project aimed to improve understanding of treatment and management requirements for reclaimed water distribution by running a long-term simulated reclaimed water distribution system experiment. Metagenomic samples were collected from water, biofilm and sediment in the distribution system and analyzed for community structure, function and presence of antibiotic resistance genes and pathogens.
sequencing method
NextSeq 550
completeness software
CheckM2;1.0.2;default
geographic location (country and/or sea)
USA
isolation_source
bioreactor metagenome