20_0275
soil metagenome
Pinguicula_MilliQ
ENA first public
2025-09-15
External Id
SAMEA114388875
INSDC center name
UiT The Arctic University of Norway
INSDC last update
2023-09-15T10:26:19Z
INSDC status
public
Submitter Id
20_0275
broad-scale environmental context
tundra biome
collection date
2018-08-27
environmental medium
soil
geographic location (country and/or sea)
Sweden
geographic location (latitude)
68.32722
geographic location (longitude)
18.84793
geographic location (region and locality)
Abisko, Norrbottens lan
host common name
Pinguicula
local environmental context
heath
nucleic acid amplification
Clemmensen, K.E., Ihrmark, K., Durling, M.B., Lindahl, B.D., 2016. Sample preparation for fungal community analysis by high-throughput sequencing of barcode amplicons. Methods in Molecular Biology 1399, 61�88. https://doi.org/10.1007/978-1-4939-3369-3_4
nucleic acid extraction
DNEasy Powersoil Pro Kit https://www.qiagen.com/us/resources/download.aspx?id=3d576814-4f1e-4e26-9c94-57d5dc2bb60a&lang=en
pcr primers
gITS7 ITS4 ITS4a
plant body site
root
project name
PRJEB64296
sample name
20_0275
scientific_name
soil metagenome
target gene
ITS
target subfragment
ITS2