Metagenome-assembled genome: binchicken_co40_5
uncultured bacterium
This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic runs ERR1578618,SRR7473445 of study ERP016812.
ENA first public
2024-12-11
INSDC center name
CMR
INSDC status
public
Submitter Id
binchicken_co40_5
assembly quality
Many fragments with little to no review of assembly other than reporting of standard assembly statistics
assembly software
metaSPAdes;3.15.4;default
binning parameters
coverage and kmer
binning software
CONCOCT;1.1.0;default
broad-scale environmental context
terrestrial
collection date
not provided
completeness score
98.22
completeness software
CheckM2;1.0.2;default
contamination score
3.21
environmental medium
terrestrial
geographic location (country and/or sea)
India
geographic location (latitude)
not provided
geographic location (longitude)
not provided
investigation type
metagenome-assembled genome
isolation_source
soil metagenome
local environmental context
soil biome
metagenomic source
soil metagenome
project name
Soil consist of wide range of microbes that can be applied for various processes. This study aims to do meta-genomics analysis of the given soil sample.
sample derived from
SAMEA4378227,SAMN09580621
sample name
binchicken_co40_5
scientific_name
uncultured bacterium
sequencing method
Illumina HiSeq 1000
taxonomic identity marker
multi-marker approach