Metagenome-assembled genome: SRP163575_co3_100
uncultured Flavobacteriaceae bacterium
This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR8439172 of study SRP178963.
ENA first public
2024-12-11
INSDC center name
CMR
INSDC status
public
Submitter Id
SRP163575_co3_100
assembly quality
Many fragments with little to no review of assembly other than reporting of standard assembly statistics
assembly software
metaSPAdes;3.15.4;default
binning parameters
coverage and kmer
binning software
MetaBAT2;2.15;default
broad-scale environmental context
aquatic
collection date
2008-07-24
completeness score
86.18
completeness software
CheckM2;1.0.2;default
contamination score
0.07
environmental medium
aquatic
geographic location (country and/or sea)
Atlantic Ocean
geographic location (latitude)
37.29170000
geographic location (longitude)
-32.27790000
investigation type
metagenome-assembled genome
isolation_source
hydrothermal vent metagenome
local environmental context
hydrothermal vent biome
metagenomic source
hydrothermal vent metagenome
project name
Hydrothermal vent microbial communities from Mid Atlantic Ridge, Atlantic Ocean
sample derived from
SAMN10350645
sample name
SRP163575_co3_100
scientific_name
uncultured Flavobacteriaceae bacterium
sequencing method
Illumina HiSeq 2500
taxonomic identity marker
multi-marker approach