Metagenome-assembled genome: binchicken_co41_50
uncultured Veillonellaceae bacterium
This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic runs ERR4682373,ERR4682852 of study ERP124492.
ENA first public
2024-12-11
INSDC center name
CMR
INSDC status
public
Submitter Id
binchicken_co41_50
assembly quality
Many fragments with little to no review of assembly other than reporting of standard assembly statistics
assembly software
metaSPAdes;3.15.4;default
binning parameters
coverage and kmer
binning software
CONCOCT;1.1.0;default
broad-scale environmental context
aquatic
collection date
not provided
completeness score
92.15
completeness software
CheckM2;1.0.2;default
contamination score
8.36
environmental medium
aquatic
geographic location (country and/or sea)
Malaysia
geographic location (latitude)
not provided
geographic location (longitude)
not provided
investigation type
metagenome-assembled genome
isolation_source
wastewater metagenome
local environmental context
wastewater biome
metagenomic source
wastewater metagenome
project name
Global surveillance of antimicrobial resistance November 2017
sample derived from
SAMEA7428280,SAMEA7428494
sample name
binchicken_co41_50
scientific_name
uncultured Veillonellaceae bacterium
sequencing method
Illumina NovaSeq 6000
taxonomic identity marker
multi-marker approach