Metagenome-assembled genome: SRP314395_co1_17
uncultured Muribaculaceae bacterium
This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic runs SRR14209493,SRR14209496 of study SRP314395.
ENA first public
2024-12-11
INSDC center name
CMR
INSDC status
public
Submitter Id
SRP314395_co1_17
assembly quality
Many fragments with little to no review of assembly other than reporting of standard assembly statistics
assembly software
metaSPAdes;3.15.4;default
binning parameters
coverage and kmer
binning software
MetaBAT2;2.15;default
broad-scale environmental context
host
collection date
not provided
completeness score
96.57
completeness software
CheckM2;1.0.2;default
contamination score
0.05
environmental medium
host
geographic location (country and/or sea)
Mexico
geographic location (latitude)
19.08
geographic location (longitude)
-99.2
investigation type
metagenome-assembled genome
isolation_source
feces metagenome
local environmental context
feces biome
metagenomic source
feces metagenome
project name
Microbiome and their role in plant fiber and secondary metabolites degradation
sample derived from
SAMN18711230,SAMN18711227
sample name
SRP314395_co1_17
scientific_name
uncultured Muribaculaceae bacterium
sequencing method
Illumina NovaSeq 6000
taxonomic identity marker
multi-marker approach