Metagenome-assembled genome: binchicken_co393_25
uncultured Candidatus Kuenenia sp.
This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic runs SRR14332044,SRR14332047 of study SRP315596.
ENA first public
2024-12-11
INSDC center name
CMR
INSDC status
public
Submitter Id
binchicken_co393_25
assembly quality
Many fragments with little to no review of assembly other than reporting of standard assembly statistics
assembly software
metaSPAdes;3.15.4;default
binning parameters
coverage and kmer
binning software
MetaBAT2;2.15;default
broad-scale environmental context
aquatic
collection date
not provided
completeness score
86.75
completeness software
CheckM2;1.0.2;default
contamination score
1.55
environmental medium
aquatic
geographic location (country and/or sea)
USA
geographic location (latitude)
not provided
geographic location (longitude)
not provided
investigation type
metagenome-assembled genome
isolation_source
freshwater metagenome
local environmental context
freshwater biome
metagenomic source
freshwater metagenome
project name
DNA sequences from environmental samples collected aboard a 3rd Generation Environmental Sample Processor (3G-ESP) attached to a long-range autonomous vehicle. Sample collection took place in Western Lake Erie (WLE) to characterize HABs conditions during the August 2019 bloom. This marks the second year of deploying the 3G-ESP in WLE.
sample derived from
SAMN18335595,SAMN18335592
sample name
binchicken_co393_25
scientific_name
uncultured Candidatus Kuenenia sp.
sequencing method
Illumina NovaSeq 6000
taxonomic identity marker
multi-marker approach