Metagenome-assembled genome: SRP329715_co1_404
uncultured Kaistella sp.
This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic runs SRR15237799,SRR15237813 of study SRP329715.
assembly software
metaSPAdes;3.15.4;default
binning software
VAMB;3.0.2;default
organism
uncultured Kaistella sp.
broad-scale environmental context
aquatic
assembly quality
Many fragments with little to no review of assembly other than reporting of standard assembly statistics
collection date
2019-07-14
sample derived from
SAMN20356001,SAMN20356005
geographic location (longitude)
not provided
taxonomic identity marker
multi-marker approach
binning parameters
coverage and kmer
completeness score
58.6
contamination score
0.49
environmental medium
aquatic
geographic location (latitude)
not provided
scientific_name
uncultured Kaistella sp.
investigation type
metagenome-assembled genome
local environmental context
metagenome
metagenomic source
metagenome
project name
Metagenomics analysis in the pesticide wastewater treatment plants
sequencing method
Illumina HiSeq 2000
completeness software
CheckM2;1.0.2;default
geographic location (country and/or sea)
China
isolation_source
metagenome