Metagenome-assembled genome: binchicken_co324_7
uncultured Erysipelothrix sp.
This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic runs SRR5690703,SRR9997719 of study SRP109340.
ENA first public
2024-12-11
INSDC center name
CMR
INSDC status
public
Submitter Id
binchicken_co324_7
assembly quality
Many fragments with little to no review of assembly other than reporting of standard assembly statistics
assembly software
metaSPAdes;3.15.4;default
binning parameters
coverage and kmer
binning software
MetaBAT2;2.15;default
broad-scale environmental context
engineered
collection date
not provided
completeness score
98.14
completeness software
CheckM2;1.0.2;default
contamination score
0.48
environmental medium
engineered
geographic location (country and/or sea)
not applicable
geographic location (latitude)
not provided
geographic location (longitude)
not provided
investigation type
metagenome-assembled genome
isolation_source
activated sludge metagenome
local environmental context
activated sludge biome
metagenomic source
activated sludge metagenome
project name
Metagenitics of denitratation community
sample derived from
SAMN07248723,SAMN12606011
sample name
binchicken_co324_7
scientific_name
uncultured Erysipelothrix sp.
sequencing method
Illumina HiSeq 1500,Illumina NovaSeq 6000
taxonomic identity marker
multi-marker approach