Metagenome-assembled genome: SRP163645_co1_218
uncultured Lentisphaerales bacterium
This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic runs SRR8157149,SRR8157150 of study SRP163645.
ENA first public
2024-12-11
INSDC center name
CMR
INSDC status
public
Submitter Id
SRP163645_co1_218
assembly quality
Many fragments with little to no review of assembly other than reporting of standard assembly statistics
assembly software
MEGAHIT;1.2.9;default
binning parameters
coverage and kmer
binning software
SemiBin2;2.0.2;default
broad-scale environmental context
aquatic
collection date
2016-08
completeness score
76.59
completeness software
CheckM2;1.0.2;default
contamination score
3.05
environmental medium
aquatic
geographic location (country and/or sea)
Svalbard
geographic location (latitude)
not provided
geographic location (longitude)
not provided
investigation type
metagenome-assembled genome
isolation_source
marine sediment metagenome
local environmental context
marine sediment biome
metagenomic source
marine sediment metagenome
project name
16S rRNA amplicons were generated from two sites in Van Keulenfjorden, Svalbard in 2016.
sample derived from
SAMN10372306,SAMN10372305
sample name
SRP163645_co1_218
scientific_name
uncultured Lentisphaerales bacterium
sequencing method
Illumina HiSeq 2500
taxonomic identity marker
multi-marker approach