Metagenome-assembled genome: SRP342105_co1_288
uncultured Oligoflexales bacterium
This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic runs SRR16481186,SRR16481187 of study SRP342105.
ENA first public
2024-12-11
INSDC center name
CMR
INSDC status
public
Submitter Id
SRP342105_co1_288
assembly quality
Many fragments with little to no review of assembly other than reporting of standard assembly statistics
assembly software
metaSPAdes;3.15.4;default
binning parameters
coverage and kmer
binning software
SemiBin2;2.0.2;default
broad-scale environmental context
aquatic
collection date
2020-07-20
completeness score
96.2
completeness software
CheckM2;1.0.2;default
contamination score
0.89
environmental medium
aquatic
geographic location (country and/or sea)
not provided
geographic location (latitude)
not provided
geographic location (longitude)
not provided
investigation type
metagenome-assembled genome
isolation_source
wastewater metagenome
local environmental context
wastewater biome
metagenomic source
wastewater metagenome
project name
Distribution of antibiotic resistance genes and bacteria in luzhou wastewater treatment plant
sample derived from
SAMN22374900,SAMN22374899
sample name
SRP342105_co1_288
scientific_name
uncultured Oligoflexales bacterium
sequencing method
Illumina MiSeq
taxonomic identity marker
multi-marker approach