Metagenome-assembled genome: binchicken_co181_636
uncultured Bacteroidales bacterium
This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic runs SRR5459186,SRR5581655,SRR7526679,SRR8862235 of study SRP104306.
ENA first public
2024-12-11
INSDC center name
CMR
INSDC status
public
Submitter Id
binchicken_co181_636
assembly quality
Many fragments with little to no review of assembly other than reporting of standard assembly statistics
assembly software
metaSPAdes;3.15.4;default
binning parameters
coverage and kmer
binning software
VAMB;3.0.2;default
broad-scale environmental context
aquatic
collection date
not provided
completeness score
96.85
completeness software
CheckM2;1.0.2;default
contamination score
1.04
environmental medium
aquatic
geographic location (country and/or sea)
Antarctica
geographic location (latitude)
not provided
geographic location (longitude)
not provided
investigation type
metagenome-assembled genome
isolation_source
salt lake metagenome
local environmental context
salt lake biome
metagenomic source
salt lake metagenome
project name
Seasonal variation in Antarctic microbial communities: ecology, stability and susceptibility to ecosystem change
sample derived from
SAMN06267220,SAMN06343953,SAMN09201103,SAMN10864394
sample name
binchicken_co181_636
scientific_name
uncultured Bacteroidales bacterium
sequencing method
Illumina HiSeq 2500,Illumina HiSeq 2500,Illumina HiSeq 2500,Illumina NovaSeq 6000
taxonomic identity marker
multi-marker approach