Metagenome-assembled genome: SRP225648_co1_459
uncultured Lachnospiraceae bacterium
This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic runs SRR10277273,SRR10277277 of study SRP225648.
ENA first public
2024-12-11
INSDC center name
CMR
INSDC status
public
Submitter Id
SRP225648_co1_459
assembly quality
Many fragments with little to no review of assembly other than reporting of standard assembly statistics
assembly software
metaSPAdes;3.15.4;default
binning parameters
coverage and kmer
binning software
MetaBAT;2.15;default
broad-scale environmental context
host
collection date
2018
completeness score
91.05
completeness software
CheckM2;1.0.2;default
contamination score
3.87
environmental medium
host
geographic location (country and/or sea)
Indonesia
geographic location (latitude)
not provided
geographic location (longitude)
not provided
investigation type
metagenome-assembled genome
isolation_source
feces metagenome
local environmental context
feces biome
metagenomic source
feces metagenome
project name
Faecal metagenomes of Presbytis
sample derived from
SAMN13028352,SAMN13028348
sample name
SRP225648_co1_459
scientific_name
uncultured Lachnospiraceae bacterium
sequencing method
Illumina HiSeq 4000
taxonomic identity marker
multi-marker approach