Metagenome-assembled genome: binchicken_co42_38
uncultured bacterium
This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic runs SRR5112540,SRR5112541 of study SRP095142.
ENA first public
2024-12-11
INSDC center name
CMR
INSDC status
public
Submitter Id
binchicken_co42_38
assembly quality
Many fragments with little to no review of assembly other than reporting of standard assembly statistics
assembly software
metaSPAdes;3.15.4;default
binning parameters
coverage and kmer
binning software
CONCOCT;1.1.0;default
broad-scale environmental context
aquatic
collection date
2015-10-10
completeness score
94.05
completeness software
CheckM2;1.0.2;default
contamination score
0.83
environmental medium
aquatic
geographic location (country and/or sea)
China
geographic location (latitude)
37.31
geographic location (longitude)
122.0
investigation type
metagenome-assembled genome
isolation_source
marine sediment metagenome
local environmental context
marine sediment biome
metagenomic source
marine sediment metagenome
project name
HGD marine sediment metagenome raw sequence reads
sample derived from
SAMN06140901,SAMN06140898
sample name
binchicken_co42_38
scientific_name
uncultured bacterium
sequencing method
Illumina HiSeq 2500
taxonomic identity marker
multi-marker approach