Metagenome-assembled genome: binchicken_co263_50
uncultured Verrucomicrobiota bacterium
This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic runs ERR4682373,SRR12917031 of study ERP124492.
ENA first public
2024-12-11
INSDC center name
CMR
INSDC status
public
Submitter Id
binchicken_co263_50
assembly quality
Many fragments with little to no review of assembly other than reporting of standard assembly statistics
assembly software
metaSPAdes;3.15.4;default
binning parameters
coverage and kmer
binning software
MetaBAT2;2.15;default
broad-scale environmental context
aquatic
collection date
not provided
completeness score
58.84
completeness software
CheckM2;1.0.2;default
contamination score
1.4
environmental medium
aquatic
geographic location (country and/or sea)
not applicable
geographic location (latitude)
not provided
geographic location (longitude)
not provided
investigation type
metagenome-assembled genome
isolation_source
wastewater metagenome
local environmental context
wastewater biome
metagenomic source
wastewater metagenome
project name
Global surveillance of antimicrobial resistance November 2017
sample derived from
SAMEA7428280,SAMN16575664
sample name
binchicken_co263_50
scientific_name
uncultured Verrucomicrobiota bacterium
sequencing method
Illumina NovaSeq 6000,Illumina HiSeq 2500
taxonomic identity marker
multi-marker approach