Metagenome-assembled genome: binchicken_co235_367
uncultured Gemmatimonas sp.
This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic runs SRR10580903,SRR12234142 of study SRP234511.
ENA first public
2024-12-11
INSDC center name
CMR
INSDC status
public
Submitter Id
binchicken_co235_367
assembly quality
Many fragments with little to no review of assembly other than reporting of standard assembly statistics
assembly software
metaSPAdes;3.15.4;default
binning parameters
coverage and kmer
binning software
SemiBin2;2.0.2;default
broad-scale environmental context
engineered
collection date
not provided
completeness score
83.22
completeness software
CheckM2;1.0.2;default
contamination score
0.57
environmental medium
engineered
geographic location (country and/or sea)
China
geographic location (latitude)
not provided
geographic location (longitude)
not provided
investigation type
metagenome-assembled genome
isolation_source
activated sludge metagenome
local environmental context
activated sludge biome
metagenomic source
activated sludge metagenome
project name
Metagenomic and metatranscriptomic data of anammox reactors samples
sample derived from
SAMN13430372,SAMN15423199
sample name
binchicken_co235_367
scientific_name
uncultured Gemmatimonas sp.
sequencing method
Illumina HiSeq 4000,Illumina NovaSeq 6000
taxonomic identity marker
multi-marker approach