Metagenome-assembled genome: SRP301943_co6_4
uncultured Candidatus Peribacteria bacterium
This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic runs SRR13443990,SRR13443991 of study SRP301943.
ENA first public
2024-12-11
INSDC center name
CMR
INSDC status
public
Submitter Id
SRP301943_co6_4
assembly quality
Many fragments with little to no review of assembly other than reporting of standard assembly statistics
assembly software
MEGAHIT;1.2.9;default
binning parameters
coverage and kmer
binning software
MetaBAT2;2.15;default
broad-scale environmental context
host
collection date
1993
completeness score
75.19
completeness software
CheckM2;1.0.2;default
contamination score
1.74
environmental medium
host
geographic location (country and/or sea)
Australia
geographic location (latitude)
-10.44
geographic location (longitude)
144.4415
investigation type
metagenome-assembled genome
isolation_source
fish metagenome
local environmental context
fish biome
metagenomic source
fish metagenome
project name
Raw sequence reads from the light organs of Siphamia fishes containing symbiotic bioluminescent bacteria
sample derived from
SAMN17043382,SAMN17043381
sample name
SRP301943_co6_4
scientific_name
uncultured Candidatus Peribacteria bacterium
sequencing method
Illumina NovaSeq 6000,Illumina HiSeq 4000
taxonomic identity marker
multi-marker approach