Metagenome-assembled genome: SRP162660_co1_242
uncultured Anaerolineaceae bacterium
This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic runs SRR7905022,SRR7905024 of study SRP162660.
ENA first public
2024-12-11
INSDC center name
CMR
INSDC status
public
Submitter Id
SRP162660_co1_242
assembly quality
Many fragments with little to no review of assembly other than reporting of standard assembly statistics
assembly software
metaSPAdes;3.15.4;default
binning parameters
coverage and kmer
binning software
MetaBAT;2.15;default
broad-scale environmental context
aquatic
collection date
2016-09
completeness score
80.93
completeness software
CheckM2;1.0.2;default
contamination score
0.63
environmental medium
aquatic
geographic location (country and/or sea)
Japan
geographic location (latitude)
34.318
geographic location (longitude)
139.216
investigation type
metagenome-assembled genome
isolation_source
hot springs metagenome
local environmental context
hot springs biome
metagenomic source
hot springs metagenome
project name
The goal of this project was to characterize the microbial community of Japanese hot springs as unique analogs of early Earth environments, including those in which geobiologically important rock types like stromatolites and banded iron formations were deposited. Understanding the diversity and metabolisms of microbes in these environments, and the geochemical cycling they support, will help us to understand how these rock types may have formed early in Earth history.
sample derived from
SAMN10130913,SAMN10130912
sample name
SRP162660_co1_242
scientific_name
uncultured Anaerolineaceae bacterium
sequencing method
Illumina HiSeq 3000
taxonomic identity marker
multi-marker approach