Metagenome-assembled genome: binchicken_co254_30
uncultured Cyanobium sp.
This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic runs SRR12349263,SRR12349264 of study SRP274231.
ENA first public
2024-12-11
INSDC center name
CMR
INSDC status
public
Submitter Id
binchicken_co254_30
assembly quality
Many fragments with little to no review of assembly other than reporting of standard assembly statistics
assembly software
MEGAHIT;1.2.9;default
binning parameters
coverage and kmer
binning software
MetaBAT2;2.15;default
broad-scale environmental context
terrestrial
collection date
2017-06-22
completeness score
91.88
completeness software
CheckM2;1.0.2;default
contamination score
0.43
environmental medium
terrestrial
geographic location (country and/or sea)
China
geographic location (latitude)
not provided
geographic location (longitude)
not provided
investigation type
metagenome-assembled genome
isolation_source
sediment metagenome
local environmental context
sediment biome
metagenomic source
sediment metagenome
project name
microbial community diversity of duck faces and shrimp pond
sample derived from
SAMN15648635,SAMN15648634
sample name
binchicken_co254_30
scientific_name
uncultured Cyanobium sp.
sequencing method
HiSeq X Ten
taxonomic identity marker
multi-marker approach