Metagenome-assembled genome: binchicken_co220_5
uncultured Gammaproteobacteria bacterium
This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic runs SRR13007705,SRR13007709 of study SRP291609.
ENA first public
2024-12-11
INSDC center name
CMR
INSDC status
public
Submitter Id
binchicken_co220_5
assembly quality
Many fragments with little to no review of assembly other than reporting of standard assembly statistics
assembly software
metaSPAdes;3.15.4;default
binning parameters
coverage and kmer
binning software
MetaBAT2;2.15;default
broad-scale environmental context
aquatic
collection date
2019-07
completeness score
67.94
completeness software
CheckM2;1.0.2;default
contamination score
3.32
environmental medium
aquatic
geographic location (country and/or sea)
not provided
geographic location (latitude)
not provided
geographic location (longitude)
not provided
investigation type
metagenome-assembled genome
isolation_source
aquatic metagenome
local environmental context
aquatic biome
metagenomic source
aquatic metagenome
project name
Water-born microbiome
sample derived from
SAMN16679550,SAMN16679546
sample name
binchicken_co220_5
scientific_name
uncultured Gammaproteobacteria bacterium
sequencing method
Illumina NovaSeq 6000
taxonomic identity marker
multi-marker approach