Metagenome-assembled genome: binchicken_co43_66
uncultured Lachnospiraceae bacterium
This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic runs SRR10178537,SRR10178538 of study SRP223183.
ENA first public
2024-12-11
INSDC center name
CMR
INSDC status
public
Submitter Id
binchicken_co43_66
assembly quality
Many fragments with little to no review of assembly other than reporting of standard assembly statistics
assembly software
metaSPAdes;3.15.4;default
binning parameters
coverage and kmer
binning software
CONCOCT;1.1.0;default
broad-scale environmental context
aquatic
collection date
2018-12-18
completeness score
86.59
completeness software
CheckM2;1.0.2;default
contamination score
1.13
environmental medium
aquatic
geographic location (country and/or sea)
China
geographic location (latitude)
35.04
geographic location (longitude)
113.25
investigation type
metagenome-assembled genome
isolation_source
wastewater metagenome
local environmental context
wastewater biome
metagenomic source
wastewater metagenome
project name
Metagenomic sequencing of wastewater
sample derived from
SAMN12830417,SAMN12830416
sample name
binchicken_co43_66
scientific_name
uncultured Lachnospiraceae bacterium
sequencing method
Illumina NovaSeq 6000
taxonomic identity marker
multi-marker approach