Metagenome-assembled genome: SRP290908_co2_397
uncultured Sulfurospirillum sp.
This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic runs SRR12997672,SRR12997673 of study SRP290908.
ENA first public
2024-12-11
INSDC center name
CMR
INSDC status
public
Submitter Id
SRP290908_co2_397
assembly quality
Many fragments with little to no review of assembly other than reporting of standard assembly statistics
assembly software
metaSPAdes;3.15.4;default
binning parameters
coverage and kmer
binning software
VAMB;3.0.2;default
broad-scale environmental context
aquatic
collection date
2017-02-26
completeness score
87.77
completeness software
CheckM2;1.0.2;default
contamination score
0.06
environmental medium
aquatic
geographic location (country and/or sea)
India
geographic location (latitude)
31.5934
geographic location (longitude)
77.3035
investigation type
metagenome-assembled genome
isolation_source
hot springs metagenome
local environmental context
hot springs biome
metagenomic source
hot springs metagenome
project name
Presence of microbial communities in different habitats of Khirganga hot spring.</p><p>Functional profiling and sulfur-reducing potential in all three habitats of the hot spring
sample derived from
SAMN16683882,SAMN16683881
sample name
SRP290908_co2_397
scientific_name
uncultured Sulfurospirillum sp.
sequencing method
Illumina HiSeq 2500
taxonomic identity marker
multi-marker approach