Metagenome-assembled genome: SRP114822_co1_78
uncultured Gammaproteobacteria bacterium
This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic runs SRR7595087,SRR8816729 of study SRP114822.
ENA first public
2024-12-11
INSDC center name
CMR
INSDC status
public
Submitter Id
SRP114822_co1_78
assembly quality
Many fragments with little to no review of assembly other than reporting of standard assembly statistics
assembly software
metaSPAdes;3.15.4;default
binning parameters
coverage and kmer
binning software
VAMB;3.0.2;default
broad-scale environmental context
aquatic
collection date
2016-04-08
completeness score
98.56
completeness software
CheckM2;1.0.2;default
contamination score
0.03
environmental medium
aquatic
geographic location (country and/or sea)
Australia
geographic location (latitude)
-33.825374
geographic location (longitude)
151.263177
investigation type
metagenome-assembled genome
isolation_source
marine metagenome
local environmental context
marine biome
metagenomic source
marine metagenome
project name
Marine amplicons from Australian marine (benthic and pelagic environments
sample derived from
SAMN08954310
sample name
SRP114822_co1_78
scientific_name
uncultured Gammaproteobacteria bacterium
sequencing method
Illumina HiSeq 2500
taxonomic identity marker
multi-marker approach