Metagenome-assembled genome: SRP268622_co1_98
uncultured Hyphomicrobiaceae bacterium
This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic runs SRR12081734,SRR12081736 of study SRP268622.
ENA first public
2024-12-11
INSDC center name
CMR
INSDC status
public
Submitter Id
SRP268622_co1_98
assembly quality
Many fragments with little to no review of assembly other than reporting of standard assembly statistics
assembly software
metaSPAdes;3.15.4;default
binning parameters
coverage and kmer
binning software
MetaBAT2;2.15;default
broad-scale environmental context
terrestrial
collection date
not provided
completeness score
96.6
completeness software
CheckM2;1.0.2;default
contamination score
0.99
environmental medium
terrestrial
geographic location (country and/or sea)
China
geographic location (latitude)
30.6
geographic location (longitude)
120.1
investigation type
metagenome-assembled genome
isolation_source
manure metagenome
local environmental context
manure biome
metagenomic source
manure metagenome
project name
We applied metagenomic sequencing to investigate the microbial functions during bovine manure composting
sample derived from
SAMN15355926,SAMN15355924
sample name
SRP268622_co1_98
scientific_name
uncultured Hyphomicrobiaceae bacterium
sequencing method
Illumina HiSeq 2500
taxonomic identity marker
multi-marker approach