Metagenome-assembled genome: SRP178908_co1_167
uncultured Candidatus Saccharibacteria bacterium
This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic runs SRR8863434,SRR8863435 of study SRP178908.
ENA first public
2024-12-11
INSDC center name
CMR
INSDC status
public
Submitter Id
SRP178908_co1_167
assembly quality
Many fragments with little to no review of assembly other than reporting of standard assembly statistics
assembly software
metaSPAdes;3.15.4;default
binning parameters
coverage and kmer
binning software
MetaBAT;2.15;default
broad-scale environmental context
aquatic
collection date
2014
completeness score
99.26
completeness software
CheckM2;1.0.2;default
contamination score
5.63
environmental medium
aquatic
geographic location (country and/or sea)
USA
geographic location (latitude)
39.6974
geographic location (longitude)
-83.8897
investigation type
metagenome-assembled genome
isolation_source
groundwater metagenome
local environmental context
groundwater biome
metagenomic source
groundwater metagenome
project name
Ohio groundwater metagenomic samples.
sample derived from
SAMN11321108,SAMN11321104
sample name
SRP178908_co1_167
scientific_name
uncultured Candidatus Saccharibacteria bacterium
sequencing method
Illumina HiSeq 2500
taxonomic identity marker
multi-marker approach