Metagenome-assembled genome: binchicken_co183_8
uncultured Amnibacterium sp.
This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic runs SRR6957438,SRR7975955 of study SRP138007.
ENA first public
2024-12-11
INSDC center name
CMR
INSDC status
public
Submitter Id
binchicken_co183_8
assembly quality
Many fragments with little to no review of assembly other than reporting of standard assembly statistics
assembly software
metaSPAdes;3.15.4;default
binning parameters
coverage and kmer
binning software
MetaBAT2;2.15;default
broad-scale environmental context
terrestrial
collection date
2016-08-10
completeness score
85.04
completeness software
CheckM2;1.0.2;default
contamination score
3.04
environmental medium
terrestrial
geographic location (country and/or sea)
USA
geographic location (latitude)
37.876387
geographic location (longitude)
-122.246777
investigation type
metagenome-assembled genome
isolation_source
surface metagenome
local environmental context
surface biome
metagenomic source
surface metagenome
project name
Analysis of the solar panel surface microbial communities
sample derived from
SAMN08776901,SAMN08779526
sample name
binchicken_co183_8
scientific_name
uncultured Amnibacterium sp.
sequencing method
Illumina HiSeq 2500
taxonomic identity marker
multi-marker approach