Metagenome-assembled genome: binchicken_co174_50
uncultured Candidatus Saccharibacteria bacterium
This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic runs SRR12805585,SRR13766249 of study SRP259540.
ENA first public
2024-12-11
INSDC center name
CMR
INSDC status
public
Submitter Id
binchicken_co174_50
assembly quality
Many fragments with little to no review of assembly other than reporting of standard assembly statistics
assembly software
metaSPAdes;3.15.4;default
binning parameters
coverage and kmer
binning software
SemiBin2;2.0.2;default
broad-scale environmental context
terrestrial
collection date
not provided
completeness score
82.75
completeness software
CheckM2;1.0.2;default
contamination score
1.81
environmental medium
terrestrial
geographic location (country and/or sea)
China
geographic location (latitude)
not provided
geographic location (longitude)
not provided
investigation type
metagenome-assembled genome
isolation_source
soil metagenome
local environmental context
soil biome
metagenomic source
soil metagenome
project name
Identification of the keystone taxa in revegetated mine tailings and characterization of their metabolic potentials
sample derived from
SAMN16409471,SAMN18023933
sample name
binchicken_co174_50
scientific_name
uncultured Candidatus Saccharibacteria bacterium
sequencing method
Illumina HiSeq 1000,Illumina HiSeq 2500
taxonomic identity marker
multi-marker approach