Metagenome-assembled genome: SRP119689_co1_262
uncultured Acidobacteriota bacterium
This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic runs SRR6155503,SRR6155509 of study SRP119689.
ENA first public
2024-12-11
INSDC center name
CMR
INSDC status
public
Submitter Id
SRP119689_co1_262
assembly quality
Many fragments with little to no review of assembly other than reporting of standard assembly statistics
assembly software
metaSPAdes;3.15.4;default
binning parameters
coverage and kmer
binning software
SemiBin2;2.0.2;default
broad-scale environmental context
terrestrial
collection date
2015-07-21
completeness score
96.14
completeness software
CheckM2;1.0.2;default
contamination score
0.2
environmental medium
terrestrial
geographic location (country and/or sea)
USA
geographic location (latitude)
47.17
geographic location (longitude)
-89.66
investigation type
metagenome-assembled genome
isolation_source
sediment metagenome
local environmental context
sediment biome
metagenomic source
sediment metagenome
project name
Shotgun metagenome sequence reads from a single sediment core collected from Lake Superior.
sample derived from
SAMN07759013,SAMN07759014
sample name
SRP119689_co1_262
scientific_name
uncultured Acidobacteriota bacterium
sequencing method
Illumina HiSeq 2500
taxonomic identity marker
multi-marker approach