Metagenome-assembled genome: SRP041649_co1_55
uncultured Desulfurococcales archaeon
This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic runs SRR1297186,SRR1297203 of study SRP041649.
ENA first public
2024-12-11
INSDC center name
CMR
INSDC status
public
Submitter Id
SRP041649_co1_55
assembly quality
Many fragments with little to no review of assembly other than reporting of standard assembly statistics
assembly software
metaSPAdes;3.15.4;default
binning parameters
coverage and kmer
binning software
SemiBin2;2.0.2;default
broad-scale environmental context
aquatic
collection date
2012-04-25
completeness score
57.28
completeness software
CheckM2;1.0.2;default
contamination score
0.0
environmental medium
aquatic
geographic location (country and/or sea)
Taiwan
geographic location (latitude)
25.19544
geographic location (longitude)
121.60245
investigation type
metagenome-assembled genome
isolation_source
hot springs metagenome
local environmental context
hot springs biome
metagenomic source
hot springs metagenome
project name
Metagenomic raw reads from acidic hot spring microbes
sample derived from
SAMN02743532
sample name
SRP041649_co1_55
scientific_name
uncultured Desulfurococcales archaeon
sequencing method
Illumina HiSeq 2000
taxonomic identity marker
multi-marker approach