Metagenome-assembled genome: SRP098346_co1_393
uncultured Armatimonadia bacterium
This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic runs SRR5214703,SRR5214704 of study SRP098346.
ENA first public
2024-12-11
INSDC center name
CMR
INSDC status
public
Submitter Id
SRP098346_co1_393
assembly quality
Many fragments with little to no review of assembly other than reporting of standard assembly statistics
assembly software
metaSPAdes;3.15.4;default
binning parameters
coverage and kmer
binning software
SemiBin2;2.0.2;default
broad-scale environmental context
aquatic
collection date
2015-03-14
completeness score
89.06
completeness software
CheckM2;1.0.2;default
contamination score
3.6
environmental medium
aquatic
geographic location (country and/or sea)
Rwanda
geographic location (latitude)
-2.0288
geographic location (longitude)
29.1756
investigation type
metagenome-assembled genome
isolation_source
freshwater metagenome
local environmental context
freshwater biome
metagenomic source
freshwater metagenome
project name
Microbial Dark Matter project phase II - Metagenome sequencing of Anoxic lake water microbial communities
sample derived from
SAMN06266182,SAMN06264666
sample name
SRP098346_co1_393
scientific_name
uncultured Armatimonadia bacterium
sequencing method
Illumina HiSeq 2500
taxonomic identity marker
multi-marker approach