Metagenome-assembled genome: SRP199154_co1_50
uncultured Candidatus Saccharibacteria bacterium
This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic runs SRR9164842,SRR9176574 of study SRP199154.
ENA first public
2024-12-11
INSDC center name
CMR
INSDC status
public
Submitter Id
SRP199154_co1_50
assembly quality
Multiple fragments where gaps span repetitive regions. Presence of the 23S, 16S, and 5S rRNA genes and at least 18 tRNAs
assembly software
metaSPAdes;3.15.4;default
binning parameters
coverage and kmer
binning software
MetaBAT;2.15;default
broad-scale environmental context
engineered
collection date
2018-10-08
completeness score
98.98
completeness software
CheckM2;1.0.2;default
contamination score
0.06
environmental medium
engineered
geographic location (country and/or sea)
China
geographic location (latitude)
31.15
geographic location (longitude)
121.42
investigation type
metagenome-assembled genome
isolation_source
bioreactor metagenome
local environmental context
bioreactor biome
metagenomic source
bioreactor metagenome
project name
eDNA of AGS
sample derived from
SAMN11897540,SAMN11919559
sample name
SRP199154_co1_50
scientific_name
uncultured Candidatus Saccharibacteria bacterium
sequencing method
Illumina HiSeq 2500,Illumina HiSeq 4000
taxonomic identity marker
multi-marker approach