Metagenome-assembled genome: SRP124282_co5_37
uncultured Candidatus Saccharibacteria bacterium
This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic runs SRR6261452,SRR6943130 of study SRP124282.
ENA first public
2024-12-11
INSDC center name
CMR
INSDC status
public
Submitter Id
SRP124282_co5_37
assembly quality
Many fragments with little to no review of assembly other than reporting of standard assembly statistics
assembly software
metaSPAdes;3.15.4;default
binning parameters
coverage and kmer
binning software
MetaBAT;2.15;default
broad-scale environmental context
aquatic
collection date
2016-06
completeness score
91.44
completeness software
CheckM2;1.0.2;default
contamination score
0.01
environmental medium
aquatic
geographic location (country and/or sea)
Italy
geographic location (latitude)
46.2
geographic location (longitude)
10.52
investigation type
metagenome-assembled genome
isolation_source
groundwater metagenome
local environmental context
groundwater biome
metagenomic source
groundwater metagenome
project name
Whole shotgun metagenome from a therapeutic thermal spring water, extracted after filtration (at 0.22 um) from filters.
sample derived from
SAMN07808850
sample name
SRP124282_co5_37
scientific_name
uncultured Candidatus Saccharibacteria bacterium
sequencing method
Illumina HiSeq 2500
taxonomic identity marker
multi-marker approach