Metagenome-assembled genome: binchicken_co24_15
uncultured Piscirickettsiaceae bacterium
This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic runs SRR9822616,SRR9822619 of study SRP216209.
ENA first public
2024-12-11
INSDC center name
CMR
INSDC status
public
Submitter Id
binchicken_co24_15
assembly quality
Many fragments with little to no review of assembly other than reporting of standard assembly statistics
assembly software
metaSPAdes;3.15.4;default
binning parameters
coverage and kmer
binning software
CONCOCT;1.1.0;default
broad-scale environmental context
aquatic
collection date
2016-12-21
completeness score
99.98
completeness software
CheckM2;1.0.2;default
contamination score
0.03
environmental medium
aquatic
geographic location (country and/or sea)
Indian Ocean
geographic location (latitude)
not provided
geographic location (longitude)
not provided
investigation type
metagenome-assembled genome
isolation_source
hydrothermal vent metagenome
local environmental context
hydrothermal vent biome
metagenomic source
hydrothermal vent metagenome
project name
The Old City hydrothermal field is a serpentinite-hosted ecosystem. As an analogue of the Lost City hydrothermal field, it offers the opportunity to study the microbial ecology influenced by serpentinization in such particular ecosystems.
sample derived from
SAMN12349585,SAMN12349584
sample name
binchicken_co24_15
scientific_name
uncultured Piscirickettsiaceae bacterium
sequencing method
NextSeq 500
taxonomic identity marker
multi-marker approach