Metagenome-assembled genome: SRP217488_co1_63
uncultured Gemmatimonadaceae bacterium
This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic runs SRR9906329,SRR9906330 of study SRP217488.
ENA first public
2024-12-11
INSDC center name
CMR
INSDC status
public
Submitter Id
SRP217488_co1_63
assembly quality
Many fragments with little to no review of assembly other than reporting of standard assembly statistics
assembly software
metaSPAdes;3.15.4;default
binning parameters
coverage and kmer
binning software
MetaBAT2;2.15;default
broad-scale environmental context
terrestrial
collection date
not provided
completeness score
67.57
completeness software
CheckM2;1.0.2;default
contamination score
1.21
environmental medium
terrestrial
geographic location (country and/or sea)
China
geographic location (latitude)
47.16
geographic location (longitude)
124.21
investigation type
metagenome-assembled genome
isolation_source
soil metagenome
local environmental context
soil biome
metagenomic source
soil metagenome
project name
This study presents a comprehensive study that revealed the effect of drying-rewetting on CH4 flux and provides a deeper insight into the survival strategy of anaerobes during drying-rewetting.
sample derived from
SAMN12334966,SAMN12334967
sample name
SRP217488_co1_63
scientific_name
uncultured Gemmatimonadaceae bacterium
sequencing method
HiSeq X Ten
taxonomic identity marker
multi-marker approach