mouse gut metagenome
Thawed WildR microbiome aliquot used as inoculum for germ-free mouse. ~3x10^5 CFU/mL (10x excess) of marked B. acidifaciens exo tssC (inactivated T6SS by deletion of the tssC gene) was added to the WildR mixture under anaerobic conditions. Inoculum prepared independently to generate biological replicate #2
host
Mus musculus C57BL/6
isolation_source
cryopreserved ileo-cecal-colon material
collection_date
2023-02-22
geo_loc_name
USA: Washington, University of Washington
lat_lon
47.65 N 122.31 W
samp_mat_process
An aliquot of the WildR cyropreserved stock (pooled, filtered cecal material prepared March 2021) was thawed to be used in this study.
source_material_id
BA-T6-co-3
Days_post_gavage
0
Bacidexo_strain_added
tssC
Mouse_ID
gavage
BioSampleModel
Metagenome or environmental