Metagenome-assembled genome: binchicken_co115_9
uncultured Gammaproteobacteria bacterium
This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic runs SRR12133403,SRR12133404 of study SRP269697.
ENA first public
2024-12-11
INSDC center name
CMR
INSDC status
public
Submitter Id
binchicken_co115_9
assembly quality
Many fragments with little to no review of assembly other than reporting of standard assembly statistics
assembly software
metaSPAdes;3.15.4;default
binning parameters
coverage and kmer
binning software
MetaBAT2;2.15;default
broad-scale environmental context
engineered
collection date
not provided
completeness score
66.22
completeness software
CheckM2;1.0.2;default
contamination score
1.22
environmental medium
engineered
geographic location (country and/or sea)
not provided
geographic location (latitude)
not provided
geographic location (longitude)
not provided
investigation type
metagenome-assembled genome
isolation_source
sludge metagenome
local environmental context
sludge biome
metagenomic source
sludge metagenome
project name
metagenomic analysis for electro-Anaerobic membrane bioreactor
sample derived from
SAMN15423152,SAMN15423151
sample name
binchicken_co115_9
scientific_name
uncultured Gammaproteobacteria bacterium
sequencing method
Illumina HiSeq 4000
taxonomic identity marker
multi-marker approach