Metagenome-assembled genome: binchicken_co226_93
uncultured Rhodobacterales bacterium
This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic runs SRR12398058,SRR12623517 of study SRP276270.
ENA first public
2024-12-11
INSDC center name
CMR
INSDC status
public
Submitter Id
binchicken_co226_93
assembly quality
Many fragments with little to no review of assembly other than reporting of standard assembly statistics
assembly software
metaSPAdes;3.15.4;default
binning parameters
coverage and kmer
binning software
MetaBAT;2.15;default
broad-scale environmental context
terrestrial
collection date
not provided
completeness score
84.7
completeness software
CheckM2;1.0.2;default
contamination score
1.66
environmental medium
terrestrial
geographic location (country and/or sea)
not applicable
geographic location (latitude)
not provided
geographic location (longitude)
not provided
investigation type
metagenome-assembled genome
isolation_source
cold seep metagenome
local environmental context
cold seep biome
metagenomic source
cold seep metagenome
project name
Enriched cells of cold seep sediment from Mound 12 at the coast of Costa Rica, Pacific Ocean
sample derived from
SAMN14502500,SAMN13702308
sample name
binchicken_co226_93
scientific_name
uncultured Rhodobacterales bacterium
sequencing method
NextSeq 500
taxonomic identity marker
multi-marker approach