Metagenome-assembled genome: binchicken_co187_10
uncultured Eubacteriales bacterium
This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic runs DRR027590,DRR045396 of study DRP003377.
ENA first public
2024-12-11
INSDC center name
CMR
INSDC status
public
Submitter Id
binchicken_co187_10
assembly quality
Many fragments with little to no review of assembly other than reporting of standard assembly statistics
assembly software
metaSPAdes;3.15.4;default
binning parameters
coverage and kmer
binning software
MetaBAT;2.15;default
broad-scale environmental context
terrestrial
collection date
2013
completeness score
70.84
completeness software
CheckM2;1.0.2;default
contamination score
2.26
environmental medium
terrestrial
geographic location (country and/or sea)
Madagascar
geographic location (latitude)
-18.05
geographic location (longitude)
47.03
investigation type
metagenome-assembled genome
isolation_source
fossil metagenome
local environmental context
fossil biome
metagenomic source
fossil metagenome
project name
The multiple nuclear genes as well as the complete mitochondrial genomes from two species of elephant birds were sequenced.
sample derived from
SAMD00022953,SAMD00039860
sample name
binchicken_co187_10
scientific_name
uncultured Eubacteriales bacterium
sequencing method
Illumina MiSeq,Illumina HiSeq 2000
taxonomic identity marker
multi-marker approach