Metagenome-assembled genome: binchicken_co256_359
uncultured Candidatus Saccharibacteria bacterium
This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic runs SRR6479061,SRR7051284 of study SRP130036.
ENA first public
2024-12-11
INSDC center name
CMR
INSDC status
public
Submitter Id
binchicken_co256_359
assembly quality
Many fragments with little to no review of assembly other than reporting of standard assembly statistics
assembly software
metaSPAdes;3.15.4;default
binning parameters
coverage and kmer
binning software
MetaBAT2;2.15;default
broad-scale environmental context
aquatic
collection date
not provided
completeness score
88.21
completeness software
CheckM2;1.0.2;default
contamination score
1.44
environmental medium
aquatic
geographic location (country and/or sea)
Mexico
geographic location (latitude)
not provided
geographic location (longitude)
not provided
investigation type
metagenome-assembled genome
isolation_source
hydrothermal vent metagenome
local environmental context
hydrothermal vent biome
metagenomic source
hydrothermal vent metagenome
project name
The sample was collected from very oily and sulfidic sediment, no mat, a little away from M14 mat at a depth of 0-3 cm, 2000m below sea level
sample derived from
SAMN06269079,SAMN08777289
sample name
binchicken_co256_359
scientific_name
uncultured Candidatus Saccharibacteria bacterium
sequencing method
Illumina HiSeq 2500
taxonomic identity marker
multi-marker approach