Metagenome-assembled genome: binchicken_co209_104
uncultured bacterium
This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic runs SRR11582151,SRR11582174 of study SRP257756.
ENA first public
2024-12-11
INSDC center name
CMR
INSDC status
public
Submitter Id
binchicken_co209_104
assembly quality
Many fragments with little to no review of assembly other than reporting of standard assembly statistics
assembly software
metaSPAdes;3.15.4;default
binning parameters
coverage and kmer
binning software
MetaBAT2;2.15;default
broad-scale environmental context
aquatic
collection date
not provided
completeness score
79.86
completeness software
CheckM2;1.0.2;default
contamination score
4.3
environmental medium
aquatic
geographic location (country and/or sea)
Costa Rica
geographic location (latitude)
not provided
geographic location (longitude)
not provided
investigation type
metagenome-assembled genome
isolation_source
subsurface metagenome
local environmental context
subsurface biome
metagenomic source
subsurface metagenome
project name
These are metagenomes from subsurface fluids collected from a >400 km section of the Costa Rica convergent margin spanning the Nicoya Peninsula to the volcanic arc in the Northern and Central volcanic regions.
sample derived from
SAMN14653555,SAMN14653532
sample name
binchicken_co209_104
scientific_name
uncultured bacterium
sequencing method
NextSeq 500
taxonomic identity marker
multi-marker approach