Metagenome-assembled genome: SRP304980_co1_230
uncultured Flavobacteriaceae bacterium
This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic runs SRR13646124,SRR13646125 of study SRP304980.
ENA first public
2024-12-11
INSDC center name
CMR
INSDC status
public
Submitter Id
SRP304980_co1_230
assembly quality
Many fragments with little to no review of assembly other than reporting of standard assembly statistics
assembly software
metaSPAdes;3.15.4;default
binning parameters
coverage and kmer
binning software
SemiBin2;2.0.2;default
broad-scale environmental context
terrestrial
collection date
2020-04-10
completeness score
73.21
completeness software
CheckM2;1.0.2;default
contamination score
1.02
environmental medium
terrestrial
geographic location (country and/or sea)
not provided
geographic location (latitude)
not provided
geographic location (longitude)
not provided
investigation type
metagenome-assembled genome
isolation_source
soil metagenome
local environmental context
soil biome
metagenomic source
soil metagenome
project name
Spatial distribution of soil microorganism in grassland
sample derived from
SAMN17823431,SAMN17823430
sample name
SRP304980_co1_230
scientific_name
uncultured Flavobacteriaceae bacterium
sequencing method
Illumina HiSeq 4000
taxonomic identity marker
multi-marker approach