Metagenome-assembled genome: SRP278252_co1_317
uncultured Candidatus Saccharibacteria bacterium
This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic runs SRR12487035,SRR12487046 of study SRP278252.
ENA first public
2024-12-11
INSDC center name
CMR
INSDC status
public
Submitter Id
SRP278252_co1_317
assembly quality
Many fragments with little to no review of assembly other than reporting of standard assembly statistics
assembly software
metaSPAdes;3.15.4;default
binning parameters
coverage and kmer
binning software
MetaBAT2;2.15;default
broad-scale environmental context
aquatic
collection date
2018
completeness score
79.21
completeness software
CheckM2;1.0.2;default
contamination score
3.06
environmental medium
aquatic
geographic location (country and/or sea)
not provided
geographic location (latitude)
36.969389
geographic location (longitude)
127.894244
investigation type
metagenome-assembled genome
isolation_source
freshwater metagenome
local environmental context
freshwater biome
metagenomic source
freshwater metagenome
project name
Shotgun metagenomic data of Korean freshwater and wastewater from animal production facilities
sample derived from
SAMN15860754,SAMN15860753
sample name
SRP278252_co1_317
scientific_name
uncultured Candidatus Saccharibacteria bacterium
sequencing method
HiSeq X Ten
taxonomic identity marker
multi-marker approach