Metagenome-assembled genome: binchicken_co15_112
uncultured Fibrobacteraceae bacterium
This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic runs SRR13334649,SRR13334650 of study SRP299861.
ENA first public
2024-12-11
INSDC center name
CMR
INSDC status
public
Submitter Id
binchicken_co15_112
assembly quality
Many fragments with little to no review of assembly other than reporting of standard assembly statistics
assembly software
metaSPAdes;3.15.4;default
binning parameters
coverage and kmer
binning software
MetaBAT2;2.15;default
broad-scale environmental context
terrestrial
collection date
not provided
completeness score
88.4
completeness software
CheckM2;1.0.2;default
contamination score
4.4
environmental medium
terrestrial
geographic location (country and/or sea)
USA
geographic location (latitude)
29.56
geographic location (longitude)
-95.1
investigation type
metagenome-assembled genome
isolation_source
microbial mat metagenome
local environmental context
microbial mat biome
metagenomic source
microbial mat metagenome
project name
Metagenomes from 4 depths of a microbial mat from Guerrero Negro.
sample derived from
SAMN09865887,SAMN09865886
sample name
binchicken_co15_112
scientific_name
uncultured Fibrobacteraceae bacterium
sequencing method
Illumina NovaSeq 6000
taxonomic identity marker
multi-marker approach