Metagenome-assembled genome: binchicken_co178_57
uncultured Desulfarculales bacterium
This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic runs SRR14802574,SRR14817123 of study SRP323688.
ENA first public
2024-12-11
INSDC center name
CMR
INSDC status
public
Submitter Id
binchicken_co178_57
assembly quality
Multiple fragments where gaps span repetitive regions. Presence of the 23S, 16S, and 5S rRNA genes and at least 18 tRNAs
assembly software
metaSPAdes;3.15.4;default
binning parameters
coverage and kmer
binning software
MetaBAT2;2.15;default
broad-scale environmental context
terrestrial
collection date
2019-11-25
completeness score
93.93
completeness software
CheckM2;1.0.2;default
contamination score
2.71
environmental medium
terrestrial
geographic location (country and/or sea)
Australia
geographic location (latitude)
-26.44
geographic location (longitude)
153.06
investigation type
metagenome-assembled genome
isolation_source
sediment metagenome
local environmental context
sediment biome
metagenomic source
sediment metagenome
project name
To study the microbial communities in Lake Weyba and Lake Cootharaba, Sunshine Coast, Queensland, Australia
sample derived from
SAMN19461846,SAMN19700766
sample name
binchicken_co178_57
scientific_name
uncultured Desulfarculales bacterium
sequencing method
NextSeq 500
taxonomic identity marker
multi-marker approach