Metagenome-assembled genome: binchicken_co154_676
uncultured Muribaculaceae bacterium
This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic runs SRR12447077,SRR12447078,SRR12447083,SRR12447100 of study SRP277370.
ENA first public
2024-12-11
INSDC center name
CMR
INSDC status
public
Submitter Id
binchicken_co154_676
assembly quality
Many fragments with little to no review of assembly other than reporting of standard assembly statistics
assembly software
metaSPAdes;3.15.4;default
binning parameters
coverage and kmer
binning software
SemiBin2;2.0.2;default
broad-scale environmental context
aquatic
collection date
2017-12
completeness score
87.18
completeness software
CheckM2;1.0.2;default
contamination score
0.28
environmental medium
aquatic
geographic location (country and/or sea)
China
geographic location (latitude)
23.0
geographic location (longitude)
116.0
investigation type
metagenome-assembled genome
isolation_source
wastewater metagenome
local environmental context
wastewater biome
metagenomic source
wastewater metagenome
project name
Metagenomic Insights Into the relationship between bacterial and Phages to Antibiotic Resistance in Swine Feedlot Wastewater Treatment
sample derived from
SAMN15805254,SAMN15805253,SAMN15805248,SAMN15805259
sample name
binchicken_co154_676
scientific_name
uncultured Muribaculaceae bacterium
sequencing method
HiSeq X Ten
taxonomic identity marker
multi-marker approach