Metagenome-assembled genome: SRP286056_co2_561
uncultured Candidatus Saccharibacteria bacterium
This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic runs SRR12762285,SRR12762286 of study SRP286056.
ENA first public
2024-12-11
INSDC center name
CMR
INSDC status
public
Submitter Id
SRP286056_co2_561
assembly quality
Many fragments with little to no review of assembly other than reporting of standard assembly statistics
assembly software
metaSPAdes;3.15.4;default
binning parameters
coverage and kmer
binning software
VAMB;3.0.2;default
broad-scale environmental context
aquatic
collection date
not provided
completeness score
97.19
completeness software
CheckM2;1.0.2;default
contamination score
0.01
environmental medium
aquatic
geographic location (country and/or sea)
Poland
geographic location (latitude)
50.08
geographic location (longitude)
18.57
investigation type
metagenome-assembled genome
isolation_source
wastewater metagenome
local environmental context
wastewater biome
metagenomic source
wastewater metagenome
project name
The basic experimental research provided in the project will give new insight into the structure and diversity of antibiotic resistance and mobile elements in two types of wastewater treatment plants.
sample derived from
SAMN16295598,SAMN16295597
sample name
SRP286056_co2_561
scientific_name
uncultured Candidatus Saccharibacteria bacterium
sequencing method
Illumina HiSeq 2000
taxonomic identity marker
multi-marker approach