Metagenome-assembled genome: SRP050083_co3_182
Candidatus Woesearchaeota archaeon
This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic runs SRR1658343,SRR1658462 of study SRP050083.
ENA first public
2024-12-11
INSDC center name
CMR
INSDC status
public
Submitter Id
SRP050083_co3_182
assembly quality
Many fragments with little to no review of assembly other than reporting of standard assembly statistics
assembly software
metaSPAdes;3.15.4;default
binning parameters
coverage and kmer
binning software
MetaBAT2;2.15;default
broad-scale environmental context
aquatic
collection date
2011-06
completeness score
82.86
completeness software
CheckM2;1.0.2;default
contamination score
1.94
environmental medium
aquatic
geographic location (country and/or sea)
USA
geographic location (latitude)
39.5369
geographic location (longitude)
-107.7828
investigation type
metagenome-assembled genome
isolation_source
groundwater metagenome
local environmental context
groundwater biome
metagenomic source
groundwater metagenome
project name
The study encompasses 12 microbial samples sourced from an aquifer adjacent to the Colorado River near the town of Rifle, CO, USA. Samples were taken at 6 different times prior to and during an acetate amendment experiment. For each sample, cells were collected on serial 0.2 and 0.1 μm filters resulting in a total of 12 different samples.
sample derived from
SAMN03202994,SAMN03202996
sample name
SRP050083_co3_182
scientific_name
Candidatus Woesearchaeota archaeon
sequencing method
Illumina HiSeq 2000
taxonomic identity marker
multi-marker approach