Metagenome-assembled genome: binchicken_co76_449
uncultured Bdellovibrionales bacterium
This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic runs ERR594300,ERR599114 of study ERP001737.
ENA first public
2024-12-11
INSDC center name
CMR
INSDC status
public
Submitter Id
binchicken_co76_449
assembly quality
Many fragments with little to no review of assembly other than reporting of standard assembly statistics
assembly software
metaSPAdes;3.15.4;default
binning parameters
coverage and kmer
binning software
SemiBin2;2.0.2;default
broad-scale environmental context
aquatic
collection date
not provided
completeness score
74.66
completeness software
CheckM2;1.0.2;default
contamination score
4.44
environmental medium
aquatic
geographic location (country and/or sea)
not provided
geographic location (latitude)
not provided
geographic location (longitude)
not provided
investigation type
metagenome-assembled genome
isolation_source
marine metagenome
local environmental context
marine biome
metagenomic source
marine metagenome
project name
Seawater was filtered from different depths to retain small cell sizes. The DNA was extracted and submitted to high throughput sequencing.
sample derived from
SAMEA2622843,SAMEA2622817
sample name
binchicken_co76_449
scientific_name
uncultured Bdellovibrionales bacterium
sequencing method
Illumina HiSeq 2000
taxonomic identity marker
multi-marker approach