Metagenome-assembled genome: SRP124282_co12_75
uncultured Elusimicrobia bacterium
This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic runs SRR6261451,SRR6943131 of study SRP124282.
assembly software
metaSPAdes;3.15.4;default
binning software
MetaBAT;2.15;default
organism
uncultured Elusimicrobia bacterium
broad-scale environmental context
aquatic
assembly quality
Many fragments with little to no review of assembly other than reporting of standard assembly statistics
collection date
2016-06
sample derived from
SAMN07808851,SAMN07808854
geographic location (longitude)
10.52
taxonomic identity marker
multi-marker approach
binning parameters
coverage and kmer
completeness score
80.75
contamination score
1.38
environmental medium
aquatic
geographic location (latitude)
46.2
scientific_name
uncultured Elusimicrobia bacterium
investigation type
metagenome-assembled genome
local environmental context
groundwater biome
metagenomic source
groundwater metagenome
project name
Whole shotgun metagenome from a therapeutic thermal spring water, extracted after filtration (at 0.22 um) from filters.
sequencing method
Illumina HiSeq 2500
completeness software
CheckM2;1.0.2;default
geographic location (country and/or sea)
Italy
isolation_source
groundwater metagenome