Metagenome-assembled genome: SRP323688_co1_38
uncultured Dehalococcoidales bacterium
This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic runs SRR14802572,SRR14802573 of study SRP323688.
ENA first public
2024-12-11
INSDC center name
CMR
INSDC status
public
Submitter Id
SRP323688_co1_38
assembly quality
Many fragments with little to no review of assembly other than reporting of standard assembly statistics
assembly software
metaSPAdes;3.15.4;default
binning parameters
coverage and kmer
binning software
MetaBAT2;2.15;default
broad-scale environmental context
terrestrial
collection date
2018-11-20
completeness score
80.22
completeness software
CheckM2;1.0.2;default
contamination score
4.34
environmental medium
terrestrial
geographic location (country and/or sea)
Australia
geographic location (latitude)
-26.44
geographic location (longitude)
153.06
investigation type
metagenome-assembled genome
isolation_source
sediment metagenome
local environmental context
sediment biome
metagenomic source
sediment metagenome
project name
To study the microbial communities in Lake Weyba and Lake Cootharaba, Sunshine Coast, Queensland, Australia
sample derived from
SAMN19461848,SAMN19461847
sample name
SRP323688_co1_38
scientific_name
uncultured Dehalococcoidales bacterium
sequencing method
NextSeq 500
taxonomic identity marker
multi-marker approach