Metagenome-assembled genome: binchicken_co279_134
uncultured Gemmatimonadaceae bacterium
This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic runs SRR11837712,SRR11837737 of study SRP263193.
ENA first public
2024-12-11
INSDC center name
CMR
INSDC status
public
Submitter Id
binchicken_co279_134
assembly quality
Many fragments with little to no review of assembly other than reporting of standard assembly statistics
assembly software
MEGAHIT;1.2.9;default
binning parameters
coverage and kmer
binning software
SemiBin2;2.0.2;default
broad-scale environmental context
aquatic
collection date
2016-08-11
completeness score
86.11
completeness software
CheckM2;1.0.2;default
contamination score
5.57
environmental medium
aquatic
geographic location (country and/or sea)
USA
geographic location (latitude)
35.8959
geographic location (longitude)
-76.1658
investigation type
metagenome-assembled genome
isolation_source
wetland metagenome
local environmental context
wetland biome
metagenomic source
wetland metagenome
project name
Soil microbial communities from coastal freshwater wetland in North Carolina, United States dry history, dry treatment
sample derived from
SAMN14512291,SAMN14513301
sample name
binchicken_co279_134
scientific_name
uncultured Gemmatimonadaceae bacterium
sequencing method
Illumina NovaSeq 6000
taxonomic identity marker
multi-marker approach