Metagenome-assembled genome: SRP178908_co1_39
uncultured Candidatus Saccharibacteria bacterium
This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic runs SRR8863434,SRR8863435 of study SRP178908.
ENA first public
2024-12-11
INSDC center name
CMR
INSDC status
public
Submitter Id
SRP178908_co1_39
assembly quality
Multiple fragments where gaps span repetitive regions. Presence of the 23S, 16S, and 5S rRNA genes and at least 18 tRNAs
assembly software
metaSPAdes;3.15.4;default
binning parameters
coverage and kmer
binning software
MetaBAT2;2.15;default
broad-scale environmental context
aquatic
collection date
2014
completeness score
96.65
completeness software
CheckM2;1.0.2;default
contamination score
0.84
environmental medium
aquatic
geographic location (country and/or sea)
USA
geographic location (latitude)
39.6974
geographic location (longitude)
-83.8897
investigation type
metagenome-assembled genome
isolation_source
groundwater metagenome
local environmental context
groundwater biome
metagenomic source
groundwater metagenome
project name
Ohio groundwater metagenomic samples.
sample derived from
SAMN11321108,SAMN11321104
sample name
SRP178908_co1_39
scientific_name
uncultured Candidatus Saccharibacteria bacterium
sequencing method
Illumina HiSeq 2500
taxonomic identity marker
multi-marker approach