Metagenome-assembled genome: SRP135725_co3_295
uncultured Rhodoferax sp.
This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic runs SRR6837549,SRR6837564 of study SRP135725.
ENA first public
2024-12-11
INSDC center name
CMR
INSDC status
public
Submitter Id
SRP135725_co3_295
assembly quality
Many fragments with little to no review of assembly other than reporting of standard assembly statistics
assembly software
metaSPAdes;3.15.4;default
binning parameters
coverage and kmer
binning software
MetaBAT;2.15;default
broad-scale environmental context
aquatic
collection date
not provided
completeness score
73.12
completeness software
CheckM2;1.0.2;default
contamination score
4.52
environmental medium
aquatic
geographic location (country and/or sea)
Singapore
geographic location (latitude)
not provided
geographic location (longitude)
not provided
investigation type
metagenome-assembled genome
isolation_source
wastewater metagenome
local environmental context
wastewater biome
metagenomic source
wastewater metagenome
project name
A metagenomics analysis of antimicrobial resistance in urban water reclamation plant
sample derived from
SAMN08707537,SAMN08707555
sample name
SRP135725_co3_295
scientific_name
uncultured Rhodoferax sp.
sequencing method
Illumina HiSeq 2500
taxonomic identity marker
multi-marker approach