Metagenome-assembled genome: binchicken_co245_213
uncultured Candidatus Saccharibacteria bacterium
This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic runs SRR11744887,SRR11744889 of study SRP260942.
ENA first public
2024-12-11
INSDC center name
CMR
INSDC status
public
Submitter Id
binchicken_co245_213
assembly quality
Many fragments with little to no review of assembly other than reporting of standard assembly statistics
assembly software
metaSPAdes;3.15.4;default
binning parameters
coverage and kmer
binning software
MetaBAT;2.15;default
broad-scale environmental context
aquatic
collection date
2017-04-01
completeness score
87.56
completeness software
CheckM2;1.0.2;default
contamination score
0.0
environmental medium
aquatic
geographic location (country and/or sea)
not provided
geographic location (latitude)
not provided
geographic location (longitude)
not provided
investigation type
metagenome-assembled genome
isolation_source
freshwater sediment metagenome
local environmental context
freshwater sediment biome
metagenomic source
freshwater sediment metagenome
project name
The goal of this research is to analyze the effect of the addition of iron oxides and dissimilated metal-reducing bacteria on the methanogenic metabolism of the constructed wetland matrix system through the results of metagenomic sequencing.
sample derived from
SAMN09622156,SAMN09622154
sample name
binchicken_co245_213
scientific_name
uncultured Candidatus Saccharibacteria bacterium
sequencing method
Illumina HiSeq 4000
taxonomic identity marker
multi-marker approach