Metagenome-assembled genome: SRP134809_co1_139
uncultured Opitutaceae bacterium
This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic runs SRR6979426,SRR7152504 of study SRP139364.
ENA first public
2024-12-11
INSDC center name
CMR
INSDC status
public
Submitter Id
SRP134809_co1_139
assembly quality
Many fragments with little to no review of assembly other than reporting of standard assembly statistics
assembly software
metaSPAdes;3.15.4;default
binning parameters
coverage and kmer
binning software
MetaBAT2;2.15;default
broad-scale environmental context
terrestrial
collection date
2014-07-16
completeness score
62.73
completeness software
CheckM2;1.0.2;default
contamination score
1.01
environmental medium
terrestrial
geographic location (country and/or sea)
USA
geographic location (latitude)
31.972
geographic location (longitude)
-81.028
investigation type
metagenome-assembled genome
isolation_source
salt marsh metagenome
local environmental context
salt marsh biome
metagenomic source
salt marsh metagenome
project name
Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia
sample derived from
SAMN08778809,SAMN09092245
sample name
SRP134809_co1_139
scientific_name
uncultured Opitutaceae bacterium
sequencing method
Illumina HiSeq 2500
taxonomic identity marker
multi-marker approach