Metagenome-assembled genome: SRP241326_co1_1
uncultured Nitrospirales bacterium
This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic runs SRR10872647,SRR10872649 of study SRP241331.
ENA first public
2024-12-11
INSDC center name
CMR
INSDC status
public
Submitter Id
SRP241326_co1_1
assembly quality
Many fragments with little to no review of assembly other than reporting of standard assembly statistics
assembly software
metaSPAdes;3.15.4;default
binning parameters
coverage and kmer
binning software
MetaBAT2;2.15;default
broad-scale environmental context
engineered
collection date
not provided
completeness score
95.93
completeness software
CheckM2;1.0.2;default
contamination score
0.29
environmental medium
engineered
geographic location (country and/or sea)
Netherlands
geographic location (latitude)
51.9691
geographic location (longitude)
5.6654
investigation type
metagenome-assembled genome
isolation_source
sludge metagenome
local environmental context
sludge biome
metagenomic source
sludge metagenome
project name
Sludge microbial communities from methane-producing bioreactor in Wageningen University, Netherlands methanogenic biofilm granules formed in a bioreactor working under low (5 g/L Na+) salinity conditions
sample derived from
SAMN12794858,SAMN12795200
sample name
SRP241326_co1_1
scientific_name
uncultured Nitrospirales bacterium
sequencing method
Illumina NovaSeq 6000
taxonomic identity marker
multi-marker approach