Metagenome-assembled genome: SRP109090_co2_26
uncultured Dehalococcoidales bacterium
This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic runs SRR8304783,SRR8304786 of study SRP109090.
ENA first public
2024-12-11
INSDC center name
CMR
INSDC status
public
Submitter Id
SRP109090_co2_26
assembly quality
Many fragments with little to no review of assembly other than reporting of standard assembly statistics
assembly software
metaSPAdes;3.15.4;default
binning parameters
coverage and kmer
binning software
MetaBAT2;2.15;default
broad-scale environmental context
engineered
collection date
not provided
completeness score
85.83
completeness software
CheckM2;1.0.2;default
contamination score
4.15
environmental medium
engineered
geographic location (country and/or sea)
not provided
geographic location (latitude)
not provided
geographic location (longitude)
not provided
investigation type
metagenome-assembled genome
isolation_source
synthetic metagenome
local environmental context
synthetic biome
metagenomic source
synthetic metagenome
project name
A synthetic metagenome was constructed by mixing DNA from 51 bacteria, for the purposes of benchmarking metagenomic binning algorithms.
sample derived from
SAMN10581937,SAMN10581938
sample name
SRP109090_co2_26
scientific_name
uncultured Dehalococcoidales bacterium
sequencing method
Illumina NovaSeq 6000
taxonomic identity marker
multi-marker approach