Metagenome-assembled genome: SRP239054_co1_42
uncultured Thermodesulfobacteriota bacterium
This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic runs SRR10807626,SRR10807893 of study SRP239054.
ENA first public
2024-12-11
INSDC center name
CMR
INSDC status
public
Submitter Id
SRP239054_co1_42
assembly quality
Many fragments with little to no review of assembly other than reporting of standard assembly statistics
assembly software
metaSPAdes;3.15.4;default
binning parameters
coverage and kmer
binning software
MetaBAT2;2.15;default
broad-scale environmental context
engineered
collection date
2018-10-30
completeness score
86.08
completeness software
CheckM2;1.0.2;default
contamination score
3.3
environmental medium
engineered
geographic location (country and/or sea)
China
geographic location (latitude)
31.15
geographic location (longitude)
121.42
investigation type
metagenome-assembled genome
isolation_source
bioreactor metagenome
local environmental context
bioreactor biome
metagenomic source
bioreactor metagenome
project name
Nitrous oxide (N2O) emission from anammox-based process were extensively reported, but the knowledge about the source of N2O in high-rate anammox granular sludge reactors (AGSR) was limited. In this study, metagenomic combined with activity assay were applied to investigated the contribution to N2O production of anammox granules and flocs in a high-rate AGSR.
sample derived from
SAMN13702287,SAMN13702598
sample name
SRP239054_co1_42
scientific_name
uncultured Thermodesulfobacteriota bacterium
sequencing method
HiSeq X Ten
taxonomic identity marker
multi-marker approach