Metagenome-assembled genome: binchicken_co190_342
uncultured Methanolinea sp.
This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic runs SRR11031518,SRR12489248 of study SRP247456.
ENA first public
2024-12-11
INSDC center name
CMR
INSDC status
public
Submitter Id
binchicken_co190_342
assembly quality
Many fragments with little to no review of assembly other than reporting of standard assembly statistics
assembly software
metaSPAdes;3.15.4;default
binning parameters
coverage and kmer
binning software
SemiBin2;2.0.2;default
broad-scale environmental context
engineered
collection date
not provided
completeness score
99.33
completeness software
CheckM2;1.0.2;default
contamination score
1.82
environmental medium
engineered
geographic location (country and/or sea)
China
geographic location (latitude)
not provided
geographic location (longitude)
not provided
investigation type
metagenome-assembled genome
isolation_source
sludge metagenome
local environmental context
sludge biome
metagenomic source
sludge metagenome
project name
Control the development of ARGs by Biochemical method
sample derived from
SAMN14048028,SAMN15870264
sample name
binchicken_co190_342
scientific_name
uncultured Methanolinea sp.
sequencing method
Illumina HiSeq 2500,Illumina NovaSeq 6000
taxonomic identity marker
multi-marker approach