Metagenome-assembled genome: SRP140028_co1_124
uncultured Steroidobacteraceae bacterium
This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic runs SRR7004200,SRR7004203 of study SRP140031.
ENA first public
2024-12-11
INSDC center name
CMR
INSDC status
public
Submitter Id
SRP140028_co1_124
assembly quality
Many fragments with little to no review of assembly other than reporting of standard assembly statistics
assembly software
MEGAHIT;1.2.9;default
binning parameters
coverage and kmer
binning software
MetaBAT2;2.15;default
broad-scale environmental context
terrestrial
collection date
2017-02-20
completeness score
77.81
completeness software
CheckM2;1.0.2;default
contamination score
3.92
environmental medium
terrestrial
geographic location (country and/or sea)
Colombia
geographic location (latitude)
4.0627
geographic location (longitude)
-73.195
investigation type
metagenome-assembled genome
isolation_source
peat metagenome
local environmental context
peat biome
metagenomic source
peat metagenome
project name
Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia
sample derived from
SAMN08776833,SAMN08778645
sample name
SRP140028_co1_124
scientific_name
uncultured Steroidobacteraceae bacterium
sequencing method
Illumina HiSeq 2500
taxonomic identity marker
multi-marker approach