Metagenome-assembled genome: binchicken_co407_230
uncultured Methanotrichaceae archaeon
This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR4236672 of study SRP089274.
ENA first public
2024-12-11
INSDC center name
CMR
INSDC status
public
Submitter Id
binchicken_co407_230
assembly quality
Many fragments with little to no review of assembly other than reporting of standard assembly statistics
assembly software
metaSPAdes;3.15.4;default
binning parameters
coverage and kmer
binning software
VAMB;3.0.2;default
broad-scale environmental context
engineered
collection date
2014-12-17
completeness score
72.45
completeness software
CheckM2;1.0.2;default
contamination score
0.9
environmental medium
engineered
geographic location (country and/or sea)
Hong Kong
geographic location (latitude)
22.28000000
geographic location (longitude)
114.17000000
investigation type
metagenome-assembled genome
isolation_source
activated sludge metagenome
local environmental context
activated sludge biome
metagenomic source
activated sludge metagenome
project name
Metagenomics of anaerobic wastewater microbial communities to study anthropogenic carbon cycling
sample derived from
SAMN05720225
sample name
binchicken_co407_230
scientific_name
uncultured Methanotrichaceae archaeon
sequencing method
Illumina HiSeq 2500
taxonomic identity marker
multi-marker approach