MAG of SZUA-36 bacterium from US2 AOM anode enrichment
metagenome
This sample represents a MAG derived from the metagenomic sample ERS29018241
ENA first public
2026-04-24
INSDC center name
Radboud University
INSDC status
public
Submitter Id
US2_AOM_Anode_SZUA_36_MAG_001
assembly quality
Low-quality MAG
assembly software
Aviary;v0.9.0;default parameters; Flye;v2.8.3;meta setting otherwise default parameters
assigned taxonomy
d__Bacteria;p__Pseudomonadota;c__Gammaproteobacteria;o__Xanthomonadales;f__SZUA-36;g__;s__
binning parameters
Metaflye setting
binning software
Aviary
broad-scale environmental context
Original sample derived from Coastal sediment site US2 (Bothnian Sea: Swedish coast; raw reads under sample ERS29018239)
collection date
2024-07-15
completeness score
28.53
completeness software
CheckM2
contamination score
0.62
environmental medium
artificial seawater medium, 20 mM HEPES, sparged with 95%/5% Methane/CO2 (10 ml/min) and 100% N2 (2.5 ml/min)
geographic location (country and/or sea)
Netherlands
geographic location (latitude)
51.82
geographic location (longitude)
5.86
isolation_source
anodic biofilm
local environmental context
Bioelectrochemical system aiming to enrich electrogenic methane oxidizing bacteria
mean coverage raw reads vs MAGs; coverM (0.7.0)
6.8
metagenomic source
Metagenome from anodic biofilm poised at 0.6V vs SHE, methane and CO2 sparged
project name
Extracellular Electron Transfer of a Methylobacter Enrichment (PRJEB108241)
sample derived from
ERS29018241
sample name
US2_AOM_Anode_SZUA_36_MAG_001
scientific_name
metagenome
taxonomic identity marker
multi-marker approach (GTDB-Tk)