Metagenome-assembled genome: binchicken_co224_243
uncultured Lentimicrobiaceae bacterium
This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic runs SRR11829268,SRR8557214 of study SRP262755.
ENA first public
2024-12-11
INSDC center name
CMR
INSDC status
public
Submitter Id
binchicken_co224_243
assembly quality
Many fragments with little to no review of assembly other than reporting of standard assembly statistics
assembly software
metaSPAdes;3.15.4;default
binning parameters
coverage and kmer
binning software
SemiBin2;2.0.2;default
broad-scale environmental context
terrestrial
collection date
not provided
completeness score
86.27
completeness software
CheckM2;1.0.2;default
contamination score
4.78
environmental medium
terrestrial
geographic location (country and/or sea)
USA
geographic location (latitude)
not provided
geographic location (longitude)
not provided
investigation type
metagenome-assembled genome
isolation_source
salt marsh metagenome
local environmental context
salt marsh biome
metagenomic source
salt marsh metagenome
project name
Salt marsh sediment microbial communities from Sand Creek Marshes, Rowley, MA, United States
sample derived from
SAMN14511431,SAMN10864106
sample name
binchicken_co224_243
scientific_name
uncultured Lentimicrobiaceae bacterium
sequencing method
Illumina NovaSeq 6000
taxonomic identity marker
multi-marker approach