Metagenome-assembled genome: SRP256446_co1_177
uncultured Planctomycetia bacterium
This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic runs SRR11548471,SRR11548473 of study SRP256446.
ENA first public
2024-12-11
INSDC center name
CMR
INSDC status
public
Submitter Id
SRP256446_co1_177
assembly quality
Many fragments with little to no review of assembly other than reporting of standard assembly statistics
assembly software
metaSPAdes;3.15.4;default
binning parameters
coverage and kmer
binning software
SemiBin2;2.0.2;default
broad-scale environmental context
aquatic
collection date
not provided
completeness score
82.58
completeness software
CheckM2;1.0.2;default
contamination score
0.35
environmental medium
aquatic
geographic location (country and/or sea)
Finland
geographic location (latitude)
61.14
geographic location (longitude)
21.29
investigation type
metagenome-assembled genome
isolation_source
groundwater metagenome
local environmental context
groundwater biome
metagenomic source
groundwater metagenome
project name
Metagenome sequencing to uncover extant metabolisms in the terrestrial deep subsurface (OL-KR13, Olkiluoto, Finland).
sample derived from
SAMN14600459,SAMN14600457
sample name
SRP256446_co1_177
scientific_name
uncultured Planctomycetia bacterium
sequencing method
Illumina HiSeq 2500
taxonomic identity marker
multi-marker approach