Metagenome-assembled genome: binchicken_co286_84
uncultured Rikenella sp.
This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic runs SRR10580905,SRR13617031 of study SRP234511.
ENA first public
2024-12-11
INSDC center name
CMR
INSDC status
public
Submitter Id
binchicken_co286_84
assembly quality
Many fragments with little to no review of assembly other than reporting of standard assembly statistics
assembly software
metaSPAdes;3.15.4;default
binning parameters
coverage and kmer
binning software
MetaBAT;2.15;default
broad-scale environmental context
engineered
collection date
not provided
completeness score
90.82
completeness software
CheckM2;1.0.2;default
contamination score
0.3
environmental medium
engineered
geographic location (country and/or sea)
China
geographic location (latitude)
not provided
geographic location (longitude)
not provided
investigation type
metagenome-assembled genome
isolation_source
bioreactor metagenome
local environmental context
bioreactor biome
metagenomic source
bioreactor metagenome
project name
Metagenomic and metatranscriptomic data of anammox reactors samples
sample derived from
SAMN13430370,SAMN17766448
sample name
binchicken_co286_84
scientific_name
uncultured Rikenella sp.
sequencing method
Illumina HiSeq 4000
taxonomic identity marker
multi-marker approach