Metagenome-assembled genome: binchicken_co13_303
uncultured Atribacterota bacterium
This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic runs SRR5468419,SRR6056297 of study SRP104921.
ENA first public
2024-12-11
INSDC center name
CMR
INSDC status
public
Submitter Id
binchicken_co13_303
assembly quality
Many fragments with little to no review of assembly other than reporting of standard assembly statistics
assembly software
metaSPAdes;3.15.4;default
binning parameters
coverage and kmer
binning software
MetaBAT;2.15;default
broad-scale environmental context
terrestrial
collection date
2014-07-11
completeness score
63.07
completeness software
CheckM2;1.0.2;default
contamination score
0.75
environmental medium
terrestrial
geographic location (country and/or sea)
USA
geographic location (latitude)
not provided
geographic location (longitude)
-122.1331
investigation type
metagenome-assembled genome
isolation_source
soil metagenome
local environmental context
soil biome
metagenomic source
soil metagenome
project name
Microbial community dynamics and restoration in a former industrial salt pond
sample derived from
SAMN06266228,SAMN07631159
sample name
binchicken_co13_303
scientific_name
uncultured Atribacterota bacterium
sequencing method
Illumina HiSeq 2500
taxonomic identity marker
multi-marker approach