Metagenome-assembled genome: SRP239243_co1_394
uncultured Clostridiaceae bacterium
This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic runs SRR10812146,SRR10812148 of study SRP239243.
ENA first public
2024-12-11
INSDC center name
CMR
INSDC status
public
Submitter Id
SRP239243_co1_394
assembly quality
Many fragments with little to no review of assembly other than reporting of standard assembly statistics
assembly software
metaSPAdes;3.15.4;default
binning parameters
coverage and kmer
binning software
SemiBin2;2.0.2;default
broad-scale environmental context
engineered
collection date
2017
completeness score
96.94
completeness software
CheckM2;1.0.2;default
contamination score
0.92
environmental medium
engineered
geographic location (country and/or sea)
Malaysia
geographic location (latitude)
2.586126
geographic location (longitude)
101.99483
investigation type
metagenome-assembled genome
isolation_source
metagenome
local environmental context
metagenome
metagenomic source
metagenome
project name
Metagenome sequencing of a Malaysian palm oil mill effluent (POME) anaerobic digester
sample derived from
SAMN13706428,SAMN13706426
sample name
SRP239243_co1_394
scientific_name
uncultured Clostridiaceae bacterium
sequencing method
Illumina HiSeq 2500
taxonomic identity marker
multi-marker approach