Metagenome-assembled genome: SRP278252_co2_366
uncultured Candidatus Saccharibacteria bacterium
This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic runs SRR12487045,SRR12487046 of study SRP278252.
ENA first public
2024-12-11
INSDC center name
CMR
INSDC status
public
Submitter Id
SRP278252_co2_366
assembly quality
Many fragments with little to no review of assembly other than reporting of standard assembly statistics
assembly software
metaSPAdes;3.15.4;default
binning parameters
coverage and kmer
binning software
MetaBAT2;2.15;default
broad-scale environmental context
aquatic
collection date
not provided
completeness score
82.31
completeness software
CheckM2;1.0.2;default
contamination score
0.98
environmental medium
aquatic
geographic location (country and/or sea)
not provided
geographic location (latitude)
not provided
geographic location (longitude)
not provided
investigation type
metagenome-assembled genome
isolation_source
wastewater metagenome
local environmental context
wastewater biome
metagenomic source
wastewater metagenome
project name
Shotgun metagenomic data of Korean freshwater and wastewater from animal production facilities
sample derived from
SAMN15860762,SAMN15860753
sample name
SRP278252_co2_366
scientific_name
uncultured Candidatus Saccharibacteria bacterium
sequencing method
HiSeq X Ten
taxonomic identity marker
multi-marker approach