Metagenome-assembled genome: SRP292972_co2_124
uncultured Ignavibacteriales bacterium
This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic runs SRR13076500,SRR13076506 of study SRP292972.
ENA first public
2024-12-11
INSDC center name
CMR
INSDC status
public
Submitter Id
SRP292972_co2_124
assembly quality
Multiple fragments where gaps span repetitive regions. Presence of the 23S, 16S, and 5S rRNA genes and at least 18 tRNAs
assembly software
metaSPAdes;3.15.4;default
binning parameters
coverage and kmer
binning software
MetaBAT;2.15;default
broad-scale environmental context
host
collection date
2018-08
completeness score
100
completeness software
CheckM2;1.0.2;default
contamination score
0.0
environmental medium
host
geographic location (country and/or sea)
USA
geographic location (latitude)
37.23
geographic location (longitude)
-80.41
investigation type
metagenome-assembled genome
isolation_source
microbial eukaryotic metagenome
local environmental context
microbial eukaryotic biome
metagenomic source
microbial eukaryotic metagenome
project name
Reclaiming wastewater treatment plant effluent for reuse is essential for achieving water sustainability. This project aimed to improve understanding of treatment and management requirements for reclaimed water distribution by running a long-term simulated reclaimed water distribution system experiment. Metagenomic samples were collected from water, biofilm and sediment in the distribution system and analyzed for community structure, function and presence of antibiotic resistance genes and pathogens.
sample derived from
SAMN16823363,SAMN16823277
sample name
SRP292972_co2_124
scientific_name
uncultured Ignavibacteriales bacterium
sequencing method
Illumina NovaSeq 6000
taxonomic identity marker
multi-marker approach