Metagenome-assembled genome: binchicken_co170_37
uncultured Hydrogenobacter sp.
This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic runs SRR5468566,SRR5469039 of study SRP104975.
ENA first public
2024-12-11
INSDC center name
CMR
INSDC status
public
Submitter Id
binchicken_co170_37
assembly quality
Many fragments with little to no review of assembly other than reporting of standard assembly statistics
assembly software
metaSPAdes;3.15.4;default
binning parameters
coverage and kmer
binning software
MetaBAT;2.15;default
broad-scale environmental context
aquatic
collection date
not provided
completeness score
95.97
completeness software
CheckM2;1.0.2;default
contamination score
0.14
environmental medium
aquatic
geographic location (country and/or sea)
China
geographic location (latitude)
not provided
geographic location (longitude)
not provided
investigation type
metagenome-assembled genome
isolation_source
hot springs metagenome
local environmental context
hot springs biome
metagenomic source
hot springs metagenome
project name
Microbial Dark Matter project phase II - Metagenome sequencing of hot spring communities
sample derived from
SAMN06267031,SAMN06818714
sample name
binchicken_co170_37
scientific_name
uncultured Hydrogenobacter sp.
sequencing method
Illumina HiSeq 2500,Illumina HiSeq 4000
taxonomic identity marker
multi-marker approach