Metagenome-assembled genome: binchicken_co9_189
uncultured Pseudomonadota bacterium
This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic runs SRR7528417,SRR7528923 of study SRP154015.
ENA first public
2024-12-11
INSDC center name
CMR
INSDC status
public
Submitter Id
binchicken_co9_189
assembly quality
Many fragments with little to no review of assembly other than reporting of standard assembly statistics
assembly software
metaSPAdes;3.15.4;default
binning parameters
coverage and kmer
binning software
Rosella;0.4.2;default
broad-scale environmental context
aquatic
collection date
not provided
completeness score
91.31
completeness software
CheckM2;1.0.2;default
contamination score
0.12
environmental medium
aquatic
geographic location (country and/or sea)
Antarctica
geographic location (latitude)
-68.4725
geographic location (longitude)
78.188
investigation type
metagenome-assembled genome
isolation_source
salt lake metagenome
local environmental context
salt lake biome
metagenomic source
salt lake metagenome
project name
Saline water microbial communities from Ace Lake, Antarctica
sample derived from
SAMN09200944,SAMN09202392
sample name
binchicken_co9_189
scientific_name
uncultured Pseudomonadota bacterium
sequencing method
Illumina HiSeq 2500
taxonomic identity marker
multi-marker approach