Metagenome-assembled genome: SRP332253_co1_227
uncultured Spirochaetaceae bacterium
This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic runs SRR15425352,SRR15425353 of study SRP332253.
ENA first public
2024-12-11
INSDC center name
CMR
INSDC status
public
Submitter Id
SRP332253_co1_227
assembly quality
Many fragments with little to no review of assembly other than reporting of standard assembly statistics
assembly software
metaSPAdes;3.15.4;default
binning parameters
coverage and kmer
binning software
SemiBin2;2.0.2;default
broad-scale environmental context
terrestrial
collection date
2013-09-03
completeness score
86.79
completeness software
CheckM2;1.0.2;default
contamination score
5.32
environmental medium
terrestrial
geographic location (country and/or sea)
Spain
geographic location (latitude)
41.239528
geographic location (longitude)
-0.186472
investigation type
metagenome-assembled genome
isolation_source
metagenome
local environmental context
metagenome
metagenomic source
metagenome
project name
Halophilic microbial mat from Spain
sample derived from
SAMN20741915,SAMN20741914
sample name
SRP332253_co1_227
scientific_name
uncultured Spirochaetaceae bacterium
sequencing method
Illumina HiSeq 2500
taxonomic identity marker
multi-marker approach