Metagenome-assembled genome: SRP189682_co2_8
uncultured Pseudomonadota bacterium
This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic runs SRR8797212,SRR8797213 of study SRP189682.
ENA first public
2024-12-11
INSDC center name
CMR
INSDC status
public
Submitter Id
SRP189682_co2_8
assembly quality
Many fragments with little to no review of assembly other than reporting of standard assembly statistics
assembly software
metaSPAdes;3.15.4;default
binning parameters
coverage and kmer
binning software
MetaBAT2;2.15;default
broad-scale environmental context
engineered
collection date
not provided
completeness score
83.04
completeness software
CheckM2;1.0.2;default
contamination score
2.76
environmental medium
engineered
geographic location (country and/or sea)
not provided
geographic location (latitude)
not provided
geographic location (longitude)
not provided
investigation type
metagenome-assembled genome
isolation_source
activated sludge metagenome
local environmental context
activated sludge biome
metagenomic source
activated sludge metagenome
project name
different sized sludge
sample derived from
SAMN11253246,SAMN11253243
sample name
SRP189682_co2_8
scientific_name
uncultured Pseudomonadota bacterium
sequencing method
Illumina HiSeq 4000
taxonomic identity marker
multi-marker approach