Metagenome-assembled genome: binchicken_co214_152
uncultured Sphingomonadaceae bacterium
This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic runs SRR11802610,SRR11802611 of study SRP261981.
ENA first public
2024-12-11
INSDC center name
CMR
INSDC status
public
Submitter Id
binchicken_co214_152
assembly quality
Many fragments with little to no review of assembly other than reporting of standard assembly statistics
assembly software
metaSPAdes;3.15.4;default
binning parameters
coverage and kmer
binning software
MetaBAT2;2.15;default
broad-scale environmental context
engineered
collection date
2019-12-10
completeness score
91.75
completeness software
CheckM2;1.0.2;default
contamination score
2.86
environmental medium
engineered
geographic location (country and/or sea)
China
geographic location (latitude)
31.33
geographic location (longitude)
not provided
investigation type
metagenome-assembled genome
isolation_source
metagenome
local environmental context
metagenome
metagenomic source
metagenome
project name
Impact of Tetracycline on biofilm microbial communities
sample derived from
SAMN14941005,SAMN14941004
sample name
binchicken_co214_152
scientific_name
uncultured Sphingomonadaceae bacterium
sequencing method
HiSeq X Ten
taxonomic identity marker
multi-marker approach