Metagenome-assembled genome: binchicken_co171_70
uncultured Planctomycetia bacterium
This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic runs SRR8943084,SRR8943089 of study SRP193375.
ENA first public
2024-12-11
INSDC center name
CMR
INSDC status
public
Submitter Id
binchicken_co171_70
assembly quality
Many fragments with little to no review of assembly other than reporting of standard assembly statistics
assembly software
metaSPAdes;3.15.4;default
binning parameters
coverage and kmer
binning software
MetaBAT;2.15;default
broad-scale environmental context
aquatic
collection date
2018-04-23
completeness score
91.39
completeness software
CheckM2;1.0.2;default
contamination score
0.89
environmental medium
aquatic
geographic location (country and/or sea)
Sweden
geographic location (latitude)
57.21366
geographic location (longitude)
19.508972
investigation type
metagenome-assembled genome
isolation_source
aquatic metagenome
local environmental context
aquatic biome
metagenomic source
aquatic metagenome
project name
DNA and RNA from sediment samples collected in the Eastern Gotland Basin
sample derived from
SAMN11381956
sample name
binchicken_co171_70
scientific_name
uncultured Planctomycetia bacterium
sequencing method
Illumina NovaSeq 6000
taxonomic identity marker
multi-marker approach