Metagenome-assembled genome: SRP274231_co1_333
uncultured Candidatus Saccharibacteria bacterium
This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic runs SRR12349262,SRR12349273 of study SRP274231.
ENA first public
2024-12-11
INSDC center name
CMR
INSDC status
public
Submitter Id
SRP274231_co1_333
assembly quality
Many fragments with little to no review of assembly other than reporting of standard assembly statistics
assembly software
metaSPAdes;3.15.4;default
binning parameters
coverage and kmer
binning software
VAMB;3.0.2;default
broad-scale environmental context
host
collection date
2017-07-12
completeness score
95.22
completeness software
CheckM2;1.0.2;default
contamination score
0.7
environmental medium
host
geographic location (country and/or sea)
China
geographic location (latitude)
not provided
geographic location (longitude)
not provided
investigation type
metagenome-assembled genome
isolation_source
gut metagenome
local environmental context
gut biome
metagenomic source
gut metagenome
project name
microbial community diversity of duck faces and shrimp pond
sample derived from
SAMN15648618,SAMN15648617
sample name
SRP274231_co1_333
scientific_name
uncultured Candidatus Saccharibacteria bacterium
sequencing method
HiSeq X Ten
taxonomic identity marker
multi-marker approach