Metagenome-assembled genome: SRP344714_co1_26
uncultured Kaistella sp.
This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic runs SRR16797977,SRR16797981 of study SRP344714.
assembly software
metaSPAdes;3.15.4;default
binning software
MetaBAT2;2.15;default
organism
uncultured Kaistella sp.
broad-scale environmental context
terrestrial
assembly quality
Many fragments with little to no review of assembly other than reporting of standard assembly statistics
collection date
2016
sample derived from
SAMN22876306,SAMN22876302
geographic location (longitude)
-8.08
taxonomic identity marker
multi-marker approach
binning parameters
coverage and kmer
completeness score
80.61
contamination score
2.95
environmental medium
terrestrial
geographic location (latitude)
43.03
scientific_name
uncultured Kaistella sp.
investigation type
metagenome-assembled genome
local environmental context
metagenome
metagenomic source
metagenome
project name
Study using metataxonomic approaches to characterize both bacterial and fungal diversity as well as shotgun metagenomic sequencing for broad characterization of the vermicomposting microbiome
sequencing method
Illumina HiSeq 2500
completeness software
CheckM2;1.0.2;default
geographic location (country and/or sea)
Spain
isolation_source
metagenome