Metagenome-assembled genome: SRR28581533_concoct_43
uncultured Anaerostipes sp.
This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR28581533 of study SRP500203.
ENA first public
2025-12-05
INSDC center name
EMG
INSDC status
public
Submitter Id
SRR28581533_concoct_43
assembly quality
Many fragments with little to no review of assembly other than reporting of standard assembly statistics
assembly software
metaSPADES_v3.15.5
binning parameters
default
binning software
MGnify-genomes-generation-pipeline_v1.0.0
broad-scale environmental context
poultry
broker name
EBI-EMG
collection date
2023-10
completeness score
53.94
completeness software
CheckM2_v1.0.1
contamination score
1.7
environmental medium
cecal material
geographic location (country and/or sea)
China
geographic location (latitude)
23.16000000
geographic location (longitude)
113.29000000
investigation type
metagenome-assembled genome
isolation_source
chicken gut metagenome
local environmental context
chicken
metagenomic source
chicken gut metagenome
project name
Normal metagene sequencing
sample derived from
SAMN39983793
sample name
SRR28581533_concoct_43
scientific_name
uncultured Anaerostipes sp.
sequencing method
Illumina NovaSeq 6000
taxonomic identity marker
multi-marker approach