Metagenome-assembled genome: SRP214966_co7_292
uncultured Anaerolineaceae bacterium
This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR9710542 of study SRP215288.
ENA first public
2024-12-11
INSDC center name
CMR
INSDC status
public
Submitter Id
SRP214966_co7_292
assembly quality
Many fragments with little to no review of assembly other than reporting of standard assembly statistics
assembly software
metaSPAdes;3.15.4;default
binning parameters
coverage and kmer
binning software
VAMB;3.0.2;default
broad-scale environmental context
terrestrial
collection date
2016-06-09
completeness score
90.42
completeness software
CheckM2;1.0.2;default
contamination score
2.39
environmental medium
terrestrial
geographic location (country and/or sea)
USA
geographic location (latitude)
42.72200000
geographic location (longitude)
-70.84700000
investigation type
metagenome-assembled genome
isolation_source
salt marsh metagenome
local environmental context
salt marsh biome
metagenomic source
salt marsh metagenome
project name
Salt marsh sediment microbial communities from the Plum Island Ecosystem Long term ecological research (LTER), Massachusetts, United States
sample derived from
SAMN11532172
sample name
SRP214966_co7_292
scientific_name
uncultured Anaerolineaceae bacterium
sequencing method
Illumina NovaSeq 6000
taxonomic identity marker
multi-marker approach