Metagenome-assembled genome: binchicken_co3_591
uncultured Occallatibacter sp.
This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic runs SRR6183662,SRR6946416 of study SRP120194.
assembly software
metaSPAdes;3.15.4;default
binning software
SemiBin2;2.0.2;default
organism
uncultured Terracidiphilus sp.
broad-scale environmental context
aquatic
assembly quality
Many fragments with little to no review of assembly other than reporting of standard assembly statistics
collection date
not provided
sample derived from
SAMN07631776,SAMN08778604
geographic location (longitude)
-88.5476
taxonomic identity marker
multi-marker approach
binning parameters
coverage and kmer
completeness score
93.22
contamination score
3.66
environmental medium
aquatic
geographic location (latitude)
47.1149
scientific_name
uncultured Terracidiphilus sp.
investigation type
metagenome-assembled genome
local environmental context
wetland biome
metagenomic source
wetland metagenome
project name
Peatland microbial communities from PEATcosm Experiment in MTU Mesocosm Facility, Houghton
sequencing method
Illumina HiSeq 2500
completeness software
CheckM2;1.0.2;default
geographic location (country and/or sea)
USA
isolation_source
wetland metagenome