Metagenome-assembled genome: SRP155585_co2_57
uncultured Thermoanaerobaculia bacterium
This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic runs SRR7614707,SRR7614711 of study SRP155585.
ENA first public
2024-12-11
INSDC center name
CMR
INSDC status
public
Submitter Id
SRP155585_co2_57
assembly quality
Many fragments with little to no review of assembly other than reporting of standard assembly statistics
assembly software
metaSPAdes;3.15.4;default
binning parameters
coverage and kmer
binning software
MetaBAT2;2.15;default
broad-scale environmental context
aquatic
collection date
2010-03-01
completeness score
73.94
completeness software
CheckM2;1.0.2;default
contamination score
1.08
environmental medium
aquatic
geographic location (country and/or sea)
Antarctica
geographic location (latitude)
not provided
geographic location (longitude)
not provided
investigation type
metagenome-assembled genome
isolation_source
marine sediment metagenome
local environmental context
marine sediment biome
metagenomic source
marine sediment metagenome
project name
Study's goal was to sequence metagenomes from marine sediments with varying proximity to the wastewater effluent source at Davis station (Antarctica) in addition to nearby marine animal feces. This data set has relevance for determining the impact that research station wastewater has upon nearby environmental microbial communities and the GIT of native wildlife species.
sample derived from
SAMN09708231,SAMN09708227
sample name
SRP155585_co2_57
scientific_name
uncultured Thermoanaerobaculia bacterium
sequencing method
Illumina HiSeq 2000
taxonomic identity marker
multi-marker approach