Metagenome-assembled genome: binchicken_co319_117
uncultured Reyranella sp.
This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic runs ERR3494948,ERR3494955,ERR3494956,ERR3494959 of study ERP116156.
ENA first public
2024-12-11
INSDC center name
CMR
INSDC status
public
Submitter Id
binchicken_co319_117
assembly quality
Many fragments with little to no review of assembly other than reporting of standard assembly statistics
assembly software
metaSPAdes;3.15.4;default
binning parameters
coverage and kmer
binning software
MetaBAT;2.15;default
broad-scale environmental context
engineered
collection date
not provided
completeness score
98.32
completeness software
CheckM2;1.0.2;default
contamination score
0.78
environmental medium
engineered
geographic location (country and/or sea)
United Arab Emirates
geographic location (latitude)
24.413991
geographic location (longitude)
54.568687
investigation type
metagenome-assembled genome
isolation_source
biofilm metagenome
local environmental context
biofilm biome
metagenomic source
biofilm metagenome
project name
Metagenomic datasets for biofouling biofilm samples collected from the water cooling tower basins of two district cooling plants.
sample derived from
SAMEA5885953,SAMEA5885960,SAMEA5885961,SAMEA5885964
sample name
binchicken_co319_117
scientific_name
uncultured Reyranella sp.
sequencing method
Illumina HiSeq 2500
taxonomic identity marker
multi-marker approach