Metagenome-assembled genome: binchicken_co247_22
uncultured Thermotogae bacterium
This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic runs SRR1636516,SRR1636517 of study SRP049438.
ENA first public
2024-12-11
INSDC center name
CMR
INSDC status
public
Submitter Id
binchicken_co247_22
assembly quality
Many fragments with little to no review of assembly other than reporting of standard assembly statistics
assembly software
metaSPAdes;3.15.4;default
binning parameters
coverage and kmer
binning software
SemiBin2;2.0.2;default
broad-scale environmental context
aquatic
collection date
2005-06-14
completeness score
82.32
completeness software
CheckM2;1.0.2;default
contamination score
0.53
environmental medium
aquatic
geographic location (country and/or sea)
New Caledonia
geographic location (latitude)
-22.3609167
geographic location (longitude)
166.8799667
investigation type
metagenome-assembled genome
isolation_source
aquatic metagenome
local environmental context
aquatic biome
metagenomic source
aquatic metagenome
project name
Ultramafic rocks in the Earth's mantle represent a tremendous reservoir of carbon and reducing power. Upon tectonic uplift and exposure to fluid flow, serpentinization of these materials generates copious energy, sustains abiogenic synthesis of organic molecules, and provides opportunities for subsurface microbial communities to interact with deep carbon pools.
sample derived from
SAMN03154341,SAMN03154342
sample name
binchicken_co247_22
scientific_name
uncultured Thermotogae bacterium
sequencing method
Illumina HiSeq 1000
taxonomic identity marker
multi-marker approach