Metagenome-assembled genome: binchicken_co344_10
uncultured Steroidobacteraceae bacterium
This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR7094833 of study SRP144376.
ENA first public
2024-12-11
INSDC center name
CMR
INSDC status
public
Submitter Id
binchicken_co344_10
assembly quality
Many fragments with little to no review of assembly other than reporting of standard assembly statistics
assembly software
MEGAHIT;1.2.9;default
binning parameters
coverage and kmer
binning software
MetaBAT2;2.15;default
broad-scale environmental context
terrestrial
collection date
2017-05-24
completeness score
87.53
completeness software
CheckM2;1.0.2;default
contamination score
5.37
environmental medium
terrestrial
geographic location (country and/or sea)
USA
geographic location (latitude)
42.48101600
geographic location (longitude)
-72.17834300
investigation type
metagenome-assembled genome
isolation_source
soil metagenome
local environmental context
soil biome
metagenomic source
soil metagenome
project name
Forest soil from Barre Woods Harvard Forest LTER site was incubated at 10C with heavy water. Sample is from a control plot at ambient soil temperature, organic horizon - top 4cm of soil
sample derived from
SAMN08778041
sample name
binchicken_co344_10
scientific_name
uncultured Steroidobacteraceae bacterium
sequencing method
Illumina HiSeq 2500
taxonomic identity marker
multi-marker approach