Metagenome-assembled genome: SRP216815_co1_43
uncultured Burkholderiales bacterium
This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic runs SRR9860462,SRR9860463 of study SRP216815.
ENA first public
2024-12-11
INSDC center name
CMR
INSDC status
public
Submitter Id
SRP216815_co1_43
assembly quality
Many fragments with little to no review of assembly other than reporting of standard assembly statistics
assembly software
metaSPAdes;3.15.4;default
binning parameters
coverage and kmer
binning software
MetaBAT2;2.15;default
broad-scale environmental context
engineered
collection date
not provided
completeness score
94.18
completeness software
CheckM2;1.0.2;default
contamination score
6.58
environmental medium
engineered
geographic location (country and/or sea)
China
geographic location (latitude)
not provided
geographic location (longitude)
not provided
investigation type
metagenome-assembled genome
isolation_source
sludge metagenome
local environmental context
sludge biome
metagenomic source
sludge metagenome
project name
microbial culture of different carbon-nitrogen ratio in EGSB reactor.
sample derived from
SAMN12340438,SAMN12340439
sample name
SRP216815_co1_43
scientific_name
uncultured Burkholderiales bacterium
sequencing method
Illumina HiSeq 2000
taxonomic identity marker
multi-marker approach