Metagenome-assembled genome: SRP263527_co1_220
uncultured Sphaerobacteraceae bacterium
This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic runs SRR11843815,SRR11843817 of study SRP263527.
ENA first public
2024-12-11
INSDC center name
CMR
INSDC status
public
Submitter Id
SRP263527_co1_220
assembly quality
Many fragments with little to no review of assembly other than reporting of standard assembly statistics
assembly software
metaSPAdes;3.15.4;default
binning parameters
coverage and kmer
binning software
SemiBin2;2.0.2;default
broad-scale environmental context
terrestrial
collection date
2019-10-10
completeness score
72.87
completeness software
CheckM2;1.0.2;default
contamination score
1.25
environmental medium
terrestrial
geographic location (country and/or sea)
China
geographic location (latitude)
40.05
geographic location (longitude)
110.46
investigation type
metagenome-assembled genome
isolation_source
soil metagenome
local environmental context
soil biome
metagenomic source
soil metagenome
project name
Soil bacterial community treated by herbicide
sample derived from
SAMN15011666,SAMN15011664
sample name
SRP263527_co1_220
scientific_name
uncultured Sphaerobacteraceae bacterium
sequencing method
Illumina NovaSeq 6000
taxonomic identity marker
multi-marker approach