Metagenome-assembled genome: binchicken_co23_96
uncultured Chloroflexaceae bacterium
This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic runs SRR8581213,SRR8581214 of study SRP185967.
ENA first public
2024-12-11
INSDC center name
CMR
INSDC status
public
Submitter Id
binchicken_co23_96
assembly quality
Many fragments with little to no review of assembly other than reporting of standard assembly statistics
assembly software
MEGAHIT;1.2.9;default
binning parameters
coverage and kmer
binning software
MetaBAT2;2.15;default
broad-scale environmental context
terrestrial
collection date
2017-07-08
completeness score
78.63
completeness software
CheckM2;1.0.2;default
contamination score
1.71
environmental medium
terrestrial
geographic location (country and/or sea)
India
geographic location (latitude)
31.59297
geographic location (longitude)
77.30349
investigation type
metagenome-assembled genome
isolation_source
microbial mat metagenome
local environmental context
microbial mat biome
metagenomic source
microbial mat metagenome
project name
Sequencing of hot spring microbial mat from Indian Himalayas
sample derived from
SAMN10948629,SAMN10948628
sample name
binchicken_co23_96
scientific_name
uncultured Chloroflexaceae bacterium
sequencing method
Illumina MiSeq
taxonomic identity marker
multi-marker approach