Metagenome-assembled genome: binchicken_co240_184
uncultured Muribaculaceae bacterium
This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic runs SRR16327184,SRR16327212 of study SRP341360.
ENA first public
2024-12-11
INSDC center name
CMR
INSDC status
public
Submitter Id
binchicken_co240_184
assembly quality
Many fragments with little to no review of assembly other than reporting of standard assembly statistics
assembly software
metaSPAdes;3.15.4;default
binning parameters
coverage and kmer
binning software
SemiBin2;2.0.2;default
broad-scale environmental context
host
collection date
not collected
completeness score
96.77
completeness software
CheckM2;1.0.2;default
contamination score
1.39
environmental medium
host
geographic location (country and/or sea)
not provided
geographic location (latitude)
not provided
geographic location (longitude)
not provided
investigation type
metagenome-assembled genome
isolation_source
gut metagenome
local environmental context
gut biome
metagenomic source
gut metagenome
project name
Xylan alleviates dietary fiber deprivation-induced dysbiosis by selectively promoting Bifidobacterium pseudocatenulatum in pigs
sample derived from
SAMN22262148,SAMN22262109
sample name
binchicken_co240_184
scientific_name
uncultured Muribaculaceae bacterium
sequencing method
HiSeq X Ten
taxonomic identity marker
multi-marker approach