Metagenome-assembled genome: binchicken_co237_13
uncultured Coxiellaceae bacterium
This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic runs SRR15216810,SRR15216816 of study SRP329480.
ENA first public
2024-12-11
INSDC center name
CMR
INSDC status
public
Submitter Id
binchicken_co237_13
assembly quality
Many fragments with little to no review of assembly other than reporting of standard assembly statistics
assembly software
metaSPAdes;3.15.4;default
binning parameters
coverage and kmer
binning software
MetaBAT2;2.15;default
broad-scale environmental context
aquatic
collection date
2019-06-25
completeness score
97.56
completeness software
CheckM2;1.0.2;default
contamination score
5.58
environmental medium
aquatic
geographic location (country and/or sea)
China
geographic location (latitude)
not provided
geographic location (longitude)
not provided
investigation type
metagenome-assembled genome
isolation_source
seawater metagenome
local environmental context
seawater biome
metagenomic source
seawater metagenome
project name
microbial community diversity of South China Sea
sample derived from
SAMN20336538,SAMN20336532
sample name
binchicken_co237_13
scientific_name
uncultured Coxiellaceae bacterium
sequencing method
Illumina NovaSeq 6000
taxonomic identity marker
multi-marker approach