Metagenome-assembled genome: binchicken_co128_251
uncultured Gammaproteobacteria bacterium
This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic runs SRR12229868,SRR8893623 of study SRP272105.
ENA first public
2024-12-11
INSDC center name
CMR
INSDC status
public
Submitter Id
binchicken_co128_251
assembly quality
Many fragments with little to no review of assembly other than reporting of standard assembly statistics
assembly software
metaSPAdes;3.15.4;default
binning parameters
coverage and kmer
binning software
SemiBin2;2.0.2;default
broad-scale environmental context
aquatic
collection date
not provided
completeness score
86.61
completeness software
CheckM2;1.0.2;default
contamination score
1.01
environmental medium
aquatic
geographic location (country and/or sea)
China
geographic location (latitude)
not provided
geographic location (longitude)
not provided
investigation type
metagenome-assembled genome
isolation_source
wastewater metagenome
local environmental context
wastewater biome
metagenomic source
wastewater metagenome
project name
Health risk survey
sample derived from
SAMN15537701,SAMN11412378
sample name
binchicken_co128_251
scientific_name
uncultured Gammaproteobacteria bacterium
sequencing method
Illumina NovaSeq 6000,Illumina HiSeq 4000
taxonomic identity marker
multi-marker approach