Metagenome-assembled genome: SRP260945_co2_7
uncultured Rhodospirillaceae bacterium
This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic runs SRR11744943,SRR11791037 of study SRP260948.
ENA first public
2024-12-11
INSDC center name
CMR
INSDC status
public
Submitter Id
SRP260945_co2_7
assembly quality
Many fragments with little to no review of assembly other than reporting of standard assembly statistics
assembly software
MEGAHIT;1.2.9;default
binning parameters
coverage and kmer
binning software
MetaBAT2;2.15;default
broad-scale environmental context
aquatic
collection date
2007-10-06
completeness score
86.93
completeness software
CheckM2;1.0.2;default
contamination score
6.32
environmental medium
aquatic
geographic location (country and/or sea)
Indian Ocean
geographic location (latitude)
15.15
geographic location (longitude)
64.0
investigation type
metagenome-assembled genome
isolation_source
seawater metagenome
local environmental context
seawater biome
metagenomic source
seawater metagenome
project name
Seawater microbial communities from, Arabian Sea, Indian Ocean
sample derived from
SAMN14515068,SAMN14515454
sample name
SRP260945_co2_7
scientific_name
uncultured Rhodospirillaceae bacterium
sequencing method
Illumina NovaSeq 6000
taxonomic identity marker
multi-marker approach