Metagenome-assembled genome: SRP093762_co1_181
uncultured Candidatus Saccharibacteria bacterium
This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic runs SRR5161795,SRR5161805 of study SRP093762.
ENA first public
2024-12-11
INSDC center name
CMR
INSDC status
public
Submitter Id
SRP093762_co1_181
assembly quality
Many fragments with little to no review of assembly other than reporting of standard assembly statistics
assembly software
metaSPAdes;3.15.4;default
binning parameters
coverage and kmer
binning software
VAMB;3.0.2;default
broad-scale environmental context
engineered
collection date
2014-07
completeness score
100
completeness software
CheckM2;1.0.2;default
contamination score
0.0
environmental medium
engineered
geographic location (country and/or sea)
Brazil
geographic location (latitude)
-6.4432151
geographic location (longitude)
-50.0358394
investigation type
metagenome-assembled genome
isolation_source
mine drainage metagenome
local environmental context
mine drainage biome
metagenomic source
mine drainage metagenome
project name
Our study explored the taxonomic and functional diversity in tailings dam and acid mine drainage samples from a brazilian copper mine.
sample derived from
SAMN06212482
sample name
SRP093762_co1_181
scientific_name
uncultured Candidatus Saccharibacteria bacterium
sequencing method
Illumina MiSeq
taxonomic identity marker
multi-marker approach