Metagenome-assembled genome: ERP013524_co1_130
uncultured Hydrogenophaga sp.
This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic runs ERR1193293,ERR1193294 of study ERP013524.
ENA first public
2024-12-11
INSDC center name
CMR
INSDC status
public
Submitter Id
ERP013524_co1_130
assembly quality
Many fragments with little to no review of assembly other than reporting of standard assembly statistics
assembly software
metaSPAdes;3.15.4;default
binning parameters
coverage and kmer
binning software
VAMB;3.0.2;default
broad-scale environmental context
aquatic
collection date
not provided
completeness score
67.27
completeness software
CheckM2;1.0.2;default
contamination score
1.24
environmental medium
aquatic
geographic location (country and/or sea)
not provided
geographic location (latitude)
not provided
geographic location (longitude)
not provided
investigation type
metagenome-assembled genome
isolation_source
metagenome
local environmental context
metagenome
metagenomic source
metagenome
project name
tbc
sample derived from
SAMEA3712801,SAMEA3712802
sample name
ERP013524_co1_130
scientific_name
uncultured Hydrogenophaga sp.
sequencing method
Illumina HiSeq 2000
taxonomic identity marker
multi-marker approach