Metagenome-assembled genome: binchicken_co390_6
uncultured Spirochaetales bacterium
This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic runs SRR10746997,SRR13122251 of study SRP238373.
ENA first public
2024-12-11
INSDC center name
CMR
INSDC status
public
Submitter Id
binchicken_co390_6
assembly quality
Many fragments with little to no review of assembly other than reporting of standard assembly statistics
assembly software
metaSPAdes;3.15.4;default
binning parameters
coverage and kmer
binning software
MetaBAT2;2.15;default
broad-scale environmental context
host
collection date
not provided
completeness score
79.81
completeness software
CheckM2;1.0.2;default
contamination score
0.32
environmental medium
host
geographic location (country and/or sea)
not applicable
geographic location (latitude)
not provided
geographic location (longitude)
not provided
investigation type
metagenome-assembled genome
isolation_source
invertebrate metagenome
local environmental context
invertebrate biome
metagenomic source
invertebrate metagenome
project name
stool metagenome of Halocynthia roretzi during starvation treatment
sample derived from
SAMN13642135,SAMN16861209
sample name
binchicken_co390_6
scientific_name
uncultured Spirochaetales bacterium
sequencing method
Illumina NovaSeq 6000
taxonomic identity marker
multi-marker approach