Metagenome-assembled genome: binchicken_co22_129
uncultured Gammaproteobacteria bacterium
This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic runs SRR13236726,SRR13236869 of study SRP297330.
ENA first public
2024-12-11
INSDC center name
CMR
INSDC status
public
Submitter Id
binchicken_co22_129
assembly quality
Many fragments with little to no review of assembly other than reporting of standard assembly statistics
assembly software
metaSPAdes;3.15.4;default
binning parameters
coverage and kmer
binning software
MetaBAT2;2.15;default
broad-scale environmental context
engineered
collection date
2019-12-01
completeness score
88.93
completeness software
CheckM2;1.0.2;default
contamination score
1.64
environmental medium
engineered
geographic location (country and/or sea)
China
geographic location (latitude)
22.54
geographic location (longitude)
114.08
investigation type
metagenome-assembled genome
isolation_source
metagenome
local environmental context
metagenome
metagenomic source
metagenome
project name
In this study, the effects of different proportions of intermediates (ethanol, acetate, and propionate) on the methanogenic activities and microbial communities were examined by operating four anaerobic sequencing batch reactors.
sample derived from
SAMN17005576,SAMN17005578
sample name
binchicken_co22_129
scientific_name
uncultured Gammaproteobacteria bacterium
sequencing method
Illumina HiSeq 2500
taxonomic identity marker
multi-marker approach