Metagenome-assembled genome: SRP104967_co1_46
uncultured Nitrososphaerota archaeon
This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic runs SRR5468562,SRR5468564 of study SRP104971.
ENA first public
2024-12-11
INSDC center name
CMR
INSDC status
public
Submitter Id
SRP104967_co1_46
assembly quality
Many fragments with little to no review of assembly other than reporting of standard assembly statistics
assembly software
metaSPAdes;3.15.4;default
binning parameters
coverage and kmer
binning software
MetaBAT;2.15;default
broad-scale environmental context
aquatic
collection date
2014-04-06
completeness score
85.4
completeness software
CheckM2;1.0.2;default
contamination score
0.35
environmental medium
aquatic
geographic location (country and/or sea)
USA
geographic location (latitude)
37.6906
geographic location (longitude)
-118.8442
investigation type
metagenome-assembled genome
isolation_source
hot springs metagenome
local environmental context
hot springs biome
metagenomic source
hot springs metagenome
project name
Microbial Dark Matter project phase II - Metagenome sequencing of hot spring communities
sample derived from
SAMN06267029,SAMN06267030
sample name
SRP104967_co1_46
scientific_name
uncultured Nitrososphaerota archaeon
sequencing method
Illumina HiSeq 2500
taxonomic identity marker
multi-marker approach