Metagenome-assembled genome: SRP332253_co2_257
uncultured Flavobacteriaceae bacterium
This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic runs SRR15425350,SRR15425351 of study SRP332253.
ENA first public
2024-12-11
INSDC center name
CMR
INSDC status
public
Submitter Id
SRP332253_co2_257
assembly quality
Many fragments with little to no review of assembly other than reporting of standard assembly statistics
assembly software
metaSPAdes;3.15.4;default
binning parameters
coverage and kmer
binning software
VAMB;3.0.2;default
broad-scale environmental context
terrestrial
collection date
2013-09-03
completeness score
95.12
completeness software
CheckM2;1.0.2;default
contamination score
0.0
environmental medium
terrestrial
geographic location (country and/or sea)
Spain
geographic location (latitude)
41.239528
geographic location (longitude)
-0.186472
investigation type
metagenome-assembled genome
isolation_source
metagenome
local environmental context
metagenome
metagenomic source
metagenome
project name
Halophilic microbial mat from Spain
sample derived from
SAMN20741917,SAMN20741916
sample name
SRP332253_co2_257
scientific_name
uncultured Flavobacteriaceae bacterium
sequencing method
Illumina HiSeq 2500
taxonomic identity marker
multi-marker approach