Metagenome-assembled genome: ERP124720_co1_147
uncultured Mesorhizobium sp.
This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic runs ERR4863014,ERR4863017 of study ERP124720.
ENA first public
2024-12-11
INSDC center name
CMR
INSDC status
public
Submitter Id
ERP124720_co1_147
assembly quality
Many fragments with little to no review of assembly other than reporting of standard assembly statistics
assembly software
metaSPAdes;3.15.4;default
binning parameters
coverage and kmer
binning software
SemiBin2;2.0.2;default
broad-scale environmental context
terrestrial
collection date
2014
completeness score
91.54
completeness software
CheckM2;1.0.2;default
contamination score
2.23
environmental medium
terrestrial
geographic location (country and/or sea)
Germany
geographic location (latitude)
51.07
geographic location (longitude)
12.2
investigation type
metagenome-assembled genome
isolation_source
sediment metagenome
local environmental context
sediment biome
metagenomic source
sediment metagenome
project name
A community mineralizing benzene under nitrate-reducing conditions, originally enriched in sand-filled bioreactors percolated with groundwater at a benzene-contaminated aquifer, has been maintained in laboratory microcosms for many years. In this study, we monitored the succession of species in this community during the degradation of benzene under nitrate-reducing conditions.
sample derived from
SAMEA7532622,SAMEA7590565
sample name
ERP124720_co1_147
scientific_name
uncultured Mesorhizobium sp.
sequencing method
NextSeq 500
taxonomic identity marker
multi-marker approach