Metagenome-assembled genome: binchicken_co315_54
uncultured Roseivirgaceae bacterium
This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic runs SRR7939969,SRR9997720 of study SRP162853.
ENA first public
2024-12-11
INSDC center name
CMR
INSDC status
public
Submitter Id
binchicken_co315_54
assembly quality
Many fragments with little to no review of assembly other than reporting of standard assembly statistics
assembly software
metaSPAdes;3.15.4;default
binning parameters
coverage and kmer
binning software
MetaBAT2;2.15;default
broad-scale environmental context
engineered
collection date
not provided
completeness score
98.95
completeness software
CheckM2;1.0.2;default
contamination score
1.39
environmental medium
engineered
geographic location (country and/or sea)
not applicable
geographic location (latitude)
not provided
geographic location (longitude)
not provided
investigation type
metagenome-assembled genome
isolation_source
activated sludge metagenome
local environmental context
activated sludge biome
metagenomic source
activated sludge metagenome
project name
In this study, two combined nitritation and Anammox reactors with or without the addition of organics were operated. Effects of organics on nitrogen removal, biofilm formation and microbial community were investigated, and microbial interactions from QS and the role of QS were examined. In addition, the possible microbial cooperations in nitrogen removal and biofilm formation were clarified. These results could provide deep insights into microbial interactions from QS in the Anammox system.
sample derived from
SAMN10141348,SAMN12606010
sample name
binchicken_co315_54
scientific_name
uncultured Roseivirgaceae bacterium
sequencing method
Illumina MiSeq,Illumina NovaSeq 6000
taxonomic identity marker
multi-marker approach