Metagenome-assembled genome: binchicken_co16_22
uncultured Polyangiaceae bacterium
This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic runs SRR10064596,SRR9733724 of study SRP220221.
ENA first public
2024-12-11
INSDC center name
CMR
INSDC status
public
Submitter Id
binchicken_co16_22
assembly quality
Many fragments with little to no review of assembly other than reporting of standard assembly statistics
assembly software
metaSPAdes;3.15.4;default
binning parameters
coverage and kmer
binning software
CONCOCT;1.1.0;default
broad-scale environmental context
engineered
collection date
not provided
completeness score
94.21
completeness software
CheckM2;1.0.2;default
contamination score
3.71
environmental medium
engineered
geographic location (country and/or sea)
not applicable
geographic location (latitude)
not provided
geographic location (longitude)
not provided
investigation type
metagenome-assembled genome
isolation_source
bioreactor metagenome
local environmental context
bioreactor biome
metagenomic source
bioreactor metagenome
project name
There is to understand the functional diversity of microorganisms that are involved in</p><p>partial denitrification anammox granular sludge through metagenomic analyses.
sample derived from
SAMN12675117,SAMN12268147
sample name
binchicken_co16_22
scientific_name
uncultured Polyangiaceae bacterium
sequencing method
Illumina HiSeq 1500,Illumina HiSeq 4000
taxonomic identity marker
multi-marker approach