Metagenome-assembled genome: binchicken_co130_47
uncultured Rhodospirillaceae bacterium
This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic runs SRR8109492,SRR8109493 of study SRP166834.
ENA first public
2024-12-11
INSDC center name
CMR
INSDC status
public
Submitter Id
binchicken_co130_47
assembly quality
Many fragments with little to no review of assembly other than reporting of standard assembly statistics
assembly software
metaSPAdes;3.15.4;default
binning parameters
coverage and kmer
binning software
MetaBAT2;2.15;default
broad-scale environmental context
engineered
collection date
2017-11-01
completeness score
96.99
completeness software
CheckM2;1.0.2;default
contamination score
2.54
environmental medium
engineered
geographic location (country and/or sea)
China
geographic location (latitude)
39.26
geographic location (longitude)
117.25
investigation type
metagenome-assembled genome
isolation_source
bioreactor metagenome
local environmental context
bioreactor biome
metagenomic source
bioreactor metagenome
project name
Understanding the anammox community structure and active species in the immobilization-anaerobic baffled reactor after the long-term operation.
sample derived from
SAMN10274211,SAMN10274212
sample name
binchicken_co130_47
scientific_name
uncultured Rhodospirillaceae bacterium
sequencing method
Illumina HiSeq 3000
taxonomic identity marker
multi-marker approach