Metagenome-assembled genome: binchicken_co200_54
uncultured Heliomicrobium sp.
This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic runs SRR13076506,SRR13076528 of study SRP292972.
ENA first public
2024-12-11
INSDC center name
CMR
INSDC status
public
Submitter Id
binchicken_co200_54
assembly quality
Many fragments with little to no review of assembly other than reporting of standard assembly statistics
assembly software
MEGAHIT;1.2.9;default
binning parameters
coverage and kmer
binning software
MetaBAT2;2.15;default
broad-scale environmental context
engineered
collection date
2018-08
completeness score
81.24
completeness software
CheckM2;1.0.2;default
contamination score
3.54
environmental medium
engineered
geographic location (country and/or sea)
USA
geographic location (latitude)
37.23
geographic location (longitude)
-80.41
investigation type
metagenome-assembled genome
isolation_source
bioreactor metagenome
local environmental context
bioreactor biome
metagenomic source
bioreactor metagenome
project name
Reclaiming wastewater treatment plant effluent for reuse is essential for achieving water sustainability. This project aimed to improve understanding of treatment and management requirements for reclaimed water distribution by running a long-term simulated reclaimed water distribution system experiment. Metagenomic samples were collected from water, biofilm and sediment in the distribution system and analyzed for community structure, function and presence of antibiotic resistance genes and pathogens.
sample derived from
SAMN16823277,SAMN16823275
sample name
binchicken_co200_54
scientific_name
uncultured Heliomicrobium sp.
sequencing method
Illumina NovaSeq 6000
taxonomic identity marker
multi-marker approach