Metagenome-assembled genome: binchicken_co225_18
uncultured Pseudomonadaceae bacterium
This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic runs SRR11632270,SRR6986809 of study SRP258947.
ENA first public
2024-12-11
INSDC center name
CMR
INSDC status
public
Submitter Id
binchicken_co225_18
assembly quality
Many fragments with little to no review of assembly other than reporting of standard assembly statistics
assembly software
metaSPAdes;3.15.4;default
binning parameters
coverage and kmer
binning software
MetaBAT2;2.15;default
broad-scale environmental context
engineered
collection date
not provided
completeness score
57.83
completeness software
CheckM2;1.0.2;default
contamination score
0.03
environmental medium
engineered
geographic location (country and/or sea)
China
geographic location (latitude)
not provided
geographic location (longitude)
not provided
investigation type
metagenome-assembled genome
isolation_source
drinking water metagenome
local environmental context
drinking water biome
metagenomic source
drinking water metagenome
project name
Studies of microbial communities and antibiotic resistance genes in drinking water
sample derived from
SAMN14764030,SAMN08905216
sample name
binchicken_co225_18
scientific_name
uncultured Pseudomonadaceae bacterium
sequencing method
Illumina HiSeq 2500,Illumina HiSeq 4000
taxonomic identity marker
multi-marker approach