Metagenome-assembled genome: SRP067234_co1_249
uncultured Victivallales bacterium
This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic runs SRR2986055,SRR2989655 of study SRP067234.
ENA first public
2024-12-11
INSDC center name
CMR
INSDC status
public
Submitter Id
SRP067234_co1_249
assembly quality
Many fragments with little to no review of assembly other than reporting of standard assembly statistics
assembly software
MEGAHIT;1.2.9;default
binning parameters
coverage and kmer
binning software
SemiBin2;2.0.2;default
broad-scale environmental context
aquatic
collection date
2008-07
completeness score
91.42
completeness software
CheckM2;1.0.2;default
contamination score
1.37
environmental medium
aquatic
geographic location (country and/or sea)
Canada
geographic location (latitude)
49.2833
geographic location (longitude)
-119.5833
investigation type
metagenome-assembled genome
isolation_source
freshwater sediment metagenome
local environmental context
freshwater sediment biome
metagenomic source
freshwater sediment metagenome
project name
Mahoney Lake water and sediment samples
sample derived from
SAMN04330457,SAMN04330458
sample name
SRP067234_co1_249
scientific_name
uncultured Victivallales bacterium
sequencing method
Illumina HiSeq 2500
taxonomic identity marker
multi-marker approach