Infant gut metagenome, MINT-068, 5 Months, post-sorted (IgA-coated fraction)
human gut metagenome
collection_date
2022-07-01
env_broad_scale
human-associated habitat [ENVO:00009003]
env_local_scale
intestine [UBERON:0000160]
env_medium
feces [UBERON:0001988]
geo_loc_name
USA: Colorado
host
Homo sapiens
lat_lon
not collected
collection_method
diaper collection
host_age
5 Months
host_body_product
feces
host_diet
Reference complementary feeding arm; infant feeding method: formula-fed
host_disease
not applicable
host_sex
female
host_subject_id
MINT-068
host_tissue_sampled
feces
isolation_source
feces
misc_param
freeze_thaw_cycles:1
perturbation
Randomized controlled trial of complementary feeding strategies (MINT trial, NCT05012930); four arms: Meat, Dairy, Plant, Reference
samp_mat_process
IgA-seq: fecal IgA immunoprecipitation followed by metagenome sequencing of IgA-coated (post-sorted) and pre-sorted fractions; method: MIg-Seq adapted for low-biomass infant samples
samp_size
587 mg
samp_store_temp
-80 degrees Celsius
source_material_id
MINT-068_5 Months
sequencing_depth_Gbp
16.491
BioSampleModel
MIMS.me
BioSampleModel
MIGS/MIMS/MIMARKS.human-gut