43_19072020
human gut metagenome
ALT
20.63636363636364
AST
18.18181818181818
C-reactive protein
1.6800000000000002
D-dimer
538.0
ENA first public
2025-08-18
External Id
SAMEA114291118
INSDC center name
Malopolska Centre of Biotechnology
INSDC last update
2023-08-18T13:40:32Z
INSDC status
public
LDH (L)
149.0
Submitter Id
deep136
alcohol consumption frequency
not provided
allergy
no
antibiotic treatment during hospitalization
yes
antibiotics before hospital
no
broad-scale environmental context
material anatomical entity
collection date
2020-07-19
death
no
diabetes
no
diabetes type
no
environmental medium
feces
ethnicity
White
ferritin
21.63636363636364
geographic location (country and/or sea)
Poland
geographic location (latitude)
52.24
geographic location (longitude)
21.02
hospital
CSK
host body product
stool
host body site
intestine
host body-mass index
28
host height
170
host sex
female
host subject id
43
hypertension
no
icu
no
interleukin-6
2.513636363636364
local environmental context
organism substance
location of the tumour
not provided
medications dose
not provided
nationality
Polish
number of ciggaretes per day
3
other medical conditions
yes
other medications
yes
project name
Gut Microbiome Dynamics and Predictive Value in Hospitalized COVID-19 Patients: A Comparative Analysis of Shallow and Deep Shotgun Sequencing
sample human DNA contamination
0.4
sample name
deep136
sample storage temperature
-20
scientific_name
human gut metagenome
seasonal allergy
not provided
sequencing method
Illumina NovaSeq 6000
smoker
yes
smoking frequency
everyday
subject type
patient (case)
tumour
no