Shotgun metagenome from the Virilla River sediment and water; S040
sediment metagenome
ENA first public
2025-07-31
INSDC center name
UiO
INSDC status
public
Submitter Id
S040
altitude
1165
anonymized_name
S040
blaTEM
0.00E+00
broad-scale environmental context
sediment biome
coassembly
sediment_dry_2
collection date
2022-04-18
collection_timestamp
2022-04-18
depth
Not applicable
dfrA12
1.20E-06
elevation
1165
environmental medium
sediment
ermB
9.00E-06
extraction_method
metagenomes
geo_loc_name
Province (Costa Rica):San Jose Province:Tibas Canton
geographic location (country and/or sea)
Costa Rica
geographic location (latitude)
9.969
geographic location (longitude)
-84.05
geographic location (region and locality)
Province (Costa Rica):San Jose Province:Tibas Canton
intI_1
2.72E-06
is_control
FALSE
latitude
9.969
local environmental context
river/lake/stream
longitude
-84.05
molecule
DNA
pooled
No
qnrS
0
sample name
S040
sample_name
S040
sample_type
sediment
scientific_name
sediment metagenome
season
dry
season_sample_type
dry - sediment
station_id
Site 2
station_id_sample_type
Site 2 - dry - sediment
station_id_season
Site 2 - dry
station_id_season_sample_type
Site 2 - dry - sediment
sul1
1.20E-02
sul2
6.30E-03
taxon_id
749907
tetA
1.50E-05
tetQ
6.70E-05
tube_id
S040