Shotgun metagenome from the Virilla River sediment and water; A035
freshwater metagenome
DOC
1.183
ENA first public
2025-07-31
INSDC center name
UiO
INSDC status
public
NSFQI
66
Submitter Id
A035
altitude
2020
anonymized_name
A035
blaTEM
0
broad-scale environmental context
freshwater biome
cf_ef_ratio
9.00E-01
coassembly
water_dry_metag_1
collection date
2022-04-18
collection_timestamp
2022-04-18
color_upt_co
1.00E+01
conductivity_us_cm2
1.59E+02
depth
Not applicable
dfrA12
3.70E-06
ecoli_mpn_100ml
3.30E+02
efaecalis_mpn_100ml
3.50E+02
elevation
2020
environmental medium
water
ermB
1.80E-05
extraction_method
metagenomes
fecal_coliforms_mpn_100ml
3.30E+02
geo_loc_name
Province (Costa Rica):San Jose Province:Vasquez de Coronado Canton
geographic location (country and/or sea)
Costa Rica
geographic location (latitude)
9.985
geographic location (longitude)
-83.94
geographic location (region and locality)
Province (Costa Rica):San Jose Province:Vasquez de Coronado Canton
intI_1
0.00E+00
is_control
FALSE
latitude
9.985
local environmental context
river/lake/stream
longitude
-83.94
molecule
DNA
oxygen_mg_l
7.74E+00
ph
7.51E+00
pooled
No
qnrS
2.00E-06
sample name
A035
sample_name
A035
sample_type
fresh water
scientific_name
freshwater metagenome
season
dry
season_sample_type
dry - fresh water
station_id
Site 1
station_id_sample_type
Site 1 - dry - fresh water
station_id_season
Site 1 - dry
station_id_season_sample_type
Site 1 - dry - fresh water
sul1
4.60E-04
sul2
1.30E-04
taxon_id
449393
temperature_celsius
1.58E+01
tetA
9.00E-06
tetQ
3.10E-04
tube_id
A035
turbidity_unt
9.81E+00