Shotgun metagenome from the Virilla River sediment and water; S039
sediment metagenome
ENA first public
2025-07-31
INSDC center name
UiO
INSDC status
public
Submitter Id
S039
altitude
1165
anonymized_name
S039
blaTEM
0.00E+00
broad-scale environmental context
sediment biome
coassembly
sediment_dry_2
collection date
2022-04-18
collection_timestamp
2022-04-18
depth
Not applicable
dfrA12
8.50E-07
elevation
1165
environmental medium
sediment
ermB
8.50E-06
extraction_method
metagenomes
geo_loc_name
Province (Costa Rica):San Jose Province:Tibas Canton
geographic location (country and/or sea)
Costa Rica
geographic location (latitude)
9.969
geographic location (longitude)
-84.05
geographic location (region and locality)
Province (Costa Rica):San Jose Province:Tibas Canton
intI_1
1.80E-06
is_control
FALSE
latitude
9.969
local environmental context
river/lake/stream
longitude
-84.05
molecule
DNA
pooled
No
qnrS
1.60E-06
sample name
S039
sample_name
S039
sample_type
sediment
scientific_name
sediment metagenome
season
dry
season_sample_type
dry - sediment
station_id
Site 2
station_id_sample_type
Site 2 - dry - sediment
station_id_season
Site 2 - dry
station_id_season_sample_type
Site 2 - dry - sediment
sul1
5.90E-03
sul2
2.70E-03
taxon_id
749907
tetA
8.10E-06
tetQ
5.30E-05
tube_id
S039