S146 MAG 009: Rhodococcoides sp. S146-33
Rhodococcoides sp. S146-33
This sample represents a MAG derived from binned metagenome sample ERS30771208, which was derived from metagenomic sample ERS30756464 (S146_env_sample_in_culture).
ENA first public
2026-07-15
INSDC center name
BC CAS
INSDC status
public
Submitter Id
S146_MAG_009_Rhodococcoides
assembly quality
Many fragments with little to no review of assembly other than reporting of standard assembly statistics
assembly software
MEGAHIT v1.2.9; nf-core/mag v2.3.0
binning parameters
Binning performed with MaxBin2 within nf-core/mag v2.3.0; default pipeline parameters unless otherwise specified.
binning software
MaxBin2
broad-scale environmental context
terrestrial biome
collection date
2022-09-30
completeness score
98.8
completeness software
BUSCO odb12
contamination score
0.1
environmental medium
microbial mat culture
geographic location (country and/or sea)
Croatia
geographic location (latitude)
44.04152
geographic location (longitude)
16.23488
isolation_source
microbial mat culture
local environmental context
microbial mat
metagenomic source
soil metagenome
project name
PRJEB120791
sample derived from
ERS30771208
sample name
S146_MAG_009_Rhodococcoides
scientific_name
Rhodococcoides sp. S146-33
taxonomic identity marker
NCBI taxonomy: Rhodococcoides sp. S146-33; NCBI tax_id: 3738290