Fecal bacterial microbiota of mus musculus
feces metagenome
host
Mus musculus
isolation_source
feces
collection_date
2017-06-29
geo_loc_name
USA: Corvallis, Oregon
lat_lon
44.565296 N 123.276016 W
samp_mat_process
flash frozen in liquid nitrogen, maintained at -80 C until processing
group
Group 1
week
7
dose
75
infection_status
Yes
Mouse_ID
5687
Unique_Description
5687_gp1_75_wk7_yes
Male_Worms
10
Female_Worms
10
Total_paired_females
10
Total_worms
20
Weight_Necropsy
21.6
Date_Necropsy
2017-08-07T00:00:00
IFNy
2
IL10
7.66
IL17A
0
IL1
0
IL23
19.3
IL4
3.82
TNFalpha
3.45
MB_full
0
MB_moved
15
MBpartial50
10
MB_burried
10
OF_Day
1
OF_Arena
2
OF_Trial_Z1andZ2
1
OF_N_Ent_Z1
25
OF_Lat_T_Z1
0
OF_V_Mean_Z1
5.9
OF_Dist_Z1
1604.8
OF_Dpercentage_Z1
81
OF_P_Time_Z1
272.8
OF_PTpercentage_Z1
90.9
OF_N_Ent_Z2
25
OF_Lat_T_Z2
3.4
OF_V_Mean_Z2
13.8
OF_Dist_Z2
375.5
OF_Dpercentage_Z2
19
OF_P_Time_Z2
27.2
OF_PTpercentage_Z2
9.1
OF_N_Ent_TOTAL
50
OF_V_Mean_TOTAL
6.6
OF_Dist_TOTAL
1980.3
OF_P_Time_TOTAL
300
Corr_CD_Place_trial_E1
8452.648997755065
Corr_CD_Place_trial_E2
8211.035613651633
Corr_CD_Place_trial_E3
6882.12391444999
Corr_CD_Place_trial_E4
5824.934219662331
Corr_CD_Place_trial_E5
1839.9768659194947
Corr_CD_Place_trial_E6
2496.424121528845
Corr_Avg_Prox_Probe_trials_PR0
48.87429389072996
Corr_Avg_Prox_Probe_trials_PR1
45.49256947211299
Corr_Avg_Prox_Probe_trials_PR2
36.85521367116249
Corr_Avg_Prox_Probe_trials_PR3
18.25486428641888
Place_Probe_trial_groups
G1.2
Testing_group_NO
1.6
NO_Arena
2
T4_Obj1
5
T4_Obj2
1
T4_TT
6
T5_Obj1
13
T5_Obj2
33
T5_TT
46
T6_Obj1
8
T6_Obj2
20
T6_TT
28
T4_DO
0.16666666666666666
T5_DO
0.717391304347826
T6_DO
0.7142857142857143
T4_DI
-0.6666666666666666
T5_DI
0.43478260869565216
T6_DI
0.42857142857142855
concatenated_sample_ID
5687_gp1_75_wk7_yes
BioSampleModel
Metagenome or environmental