EMO BON PiEGetxo Ha 210729-211124 SF 1.2
metagenome
ENA first public
2026-04-27
INSDC center name
European Marine Biological Resource Centre
INSDC status
public
Submitter Id
EMOBON00701_COI
ampl_size
310
arms_unit_id
PiEGetxo1
broad-scale environmental context
marine benthic biome [ENVO_01000024]; harbor [ENVO:00000463]; marine reef biome [ENVO:01000029]
collection date
2021-11-24
deployment_date
2021-07-29
depth
10
dna concentration
8.57
environmental medium
blended biomass derived from sessile communities colonising an autonomous reef monitoring structure [ENVO:01001863]
geographic location (country and/or sea)
Spain
geographic location (latitude)
43.338452
geographic location (locality)
Abra de Bilbao
geographic location (longitude)
-3.014833
geographic location (ocean)
North Atlantic Ocean
geographic location (region and locality)
Bay of Biscay
ha_id
PiEGetxo Ha
lib_layout
PAIRED
library reads sequenced
1662100
local environmental context
muddy soil [ENVO:00005771]
nucleic acid extraction
Quick-DNA Fecal/soil
obs_id
PiEGetxo
pcr primers
GGWACWGGWTGAACWGTWTAYCCYCC; TAIACYTCIGGRTGICCRAARAAYCA
pcr_blank_1
CEB_DEV
pcr_blank_2
CEB_DEW
preservative
DESS
project name
EMOBON
quality_assessment
Pass
relevant standard operating procedures
Prod_ILL_BqADN_SuperLowCost_150_v3
replicate
2
resequencing
No
samp_fraction
SF
samp_site
Getxo
sample collection device
autonomous reef monitoring structure [ENVO:01001855]
sample material processing
ARMS Handbook v3.0
sample name
EMOBON00701_COI
samples_alias_orig
EMOBON00701
sampling_event
PiEGetxo_G1_Ha_210729_211124
scientific_name
metagenome
sequence_batch
Batch3.2
sequence_batch_rundate
Batch3.2_240220
sequence_quality_check
basic Genoscope QC
sequencing method
Illumina NovaSeq 6000
source material identifiers
EMOBON_PiEGetxo_Ha_6
source_mat_id_an
EMOBON_PiEGetxo_Ha_6_metabCOI
source_mat_id_orig
EMO BON PiEGetxo Ha 210729-211124 SF 1.2
status
sample
target gene
COI
total depth of water column
10