Fecal bacterial microbiota of mus musculus
feces metagenome
host
Mus musculus
isolation_source
feces
collection_date
2017-06-29
geo_loc_name
USA: Corvallis, Oregon
lat_lon
44.565296 N 123.276016 W
samp_mat_process
flash frozen in liquid nitrogen, maintained at -80 C until processing
group
Group 1
week
7
dose
75
infection_status
Yes
Mouse_ID
5689
Unique_Description
5689_gp1_75_wk7_yes
Male_Worms
5
Female_Worms
4
Total_paired_females
4
Total_worms
9
Weight_Necropsy
22.6
Date_Necropsy
2017-08-07T00:00:00
IFNy
1.85
IL10
72.07
IL17A
20.07
IL1
12.77
IL23
800.39
IL4
9
TNFalpha
8.98
MB_full
0
MB_moved
12
MBpartial50
6
MB_burried
6
OF_Day
1
OF_Arena
4
OF_Trial_Z1andZ2
10
OF_N_Ent_Z1
59
OF_Lat_T_Z1
0
OF_V_Mean_Z1
10.5
OF_Dist_Z1
2472.2
OF_Dpercentage_Z1
71.3
OF_P_Time_Z1
235.8
OF_PTpercentage_Z1
78.6
OF_N_Ent_Z2
59
OF_Lat_T_Z2
5.4
OF_V_Mean_Z2
15.5
OF_Dist_Z2
997
OF_Dpercentage_Z2
28.7
OF_P_Time_Z2
64.2
OF_PTpercentage_Z2
21.4
OF_N_Ent_TOTAL
118
OF_V_Mean_TOTAL
11.6
OF_Dist_TOTAL
3469.1
OF_P_Time_TOTAL
300
Corr_CD_Place_trial_E1
10883.27221930018
Corr_CD_Place_trial_E2
12369.350754790426
Corr_CD_Place_trial_E3
9885.992660807075
Corr_CD_Place_trial_E4
6995.132574951653
Corr_CD_Place_trial_E5
1957.177632807854
Corr_CD_Place_trial_E6
2101.5404395449104
Corr_Avg_Prox_Probe_trials_PR0
51.129274056965826
Corr_Avg_Prox_Probe_trials_PR1
34.50757453533422
Corr_Avg_Prox_Probe_trials_PR2
44.143223165824026
Corr_Avg_Prox_Probe_trials_PR3
29.43567955606676
Place_Probe_trial_groups
G1.2
Testing_group_NO
1.8
NO_Arena
4
T4_Obj1
21
T4_Obj2
21
T4_TT
42
T5_Obj1
15
T5_Obj2
26
T5_TT
41
T6_Obj1
4
T6_Obj2
20
T6_TT
24
T4_DO
0.5
T5_DO
0.6341463414634146
T6_DO
0.8333333333333334
T4_DI
0
T5_DI
0.2682926829268293
T6_DI
0.6666666666666666
concatenated_sample_ID
5689_gp1_75_wk7_yes
BioSampleModel
Metagenome or environmental