Fecal bacterial microbiota of mus musculus
feces metagenome
host
Mus musculus
isolation_source
feces
collection_date
2017-07-20
geo_loc_name
USA: Corvallis, Oregon
lat_lon
44.565296 N 123.276016 W
samp_mat_process
flash frozen in liquid nitrogen, maintained at -80 C until processing
group
Group 1
week
10
dose
50
infection_status
Yes
Mouse_ID
5657
Unique_Description
5657_gp1_50_wk10_yes
Male_Worms
7
Female_Worms
3
Total_paired_females
3
Total_worms
10
Weight_Necropsy
23.22
Date_Necropsy
2017-08-04T00:00:00
IFNy
NA
IL10
NA
IL17A
NA
IL1
NA
IL23
NA
IL4
NA
TNFalpha
NA
MB_full
8
MB_moved
15
MBpartial50
5
MB_burried
13
OF_Day
1
OF_Arena
2
OF_Trial_Z1andZ2
6
OF_N_Ent_Z1
23
OF_Lat_T_Z1
0
OF_V_Mean_Z1
5.7
OF_Dist_Z1
1557.3
OF_Dpercentage_Z1
81.3
OF_P_Time_Z1
274.4
OF_PTpercentage_Z1
91.5
OF_N_Ent_Z2
23
OF_Lat_T_Z2
11.6
OF_V_Mean_Z2
14
OF_Dist_Z2
359.3
OF_Dpercentage_Z2
18.7
OF_P_Time_Z2
25.6
OF_PTpercentage_Z2
8.5
OF_N_Ent_TOTAL
46
OF_V_Mean_TOTAL
6.4
OF_Dist_TOTAL
1916.6
OF_P_Time_TOTAL
300
Corr_CD_Place_trial_E1
9816.55818
Corr_CD_Place_trial_E2
5340.56334
Corr_CD_Place_trial_E3
2046.10277
Corr_CD_Place_trial_E4
1225.71467
Corr_CD_Place_trial_E5
5032.71318
Corr_CD_Place_trial_E6
5704.12336
Corr_Avg_Prox_Probe_trials_PR0
49.3000222
Corr_Avg_Prox_Probe_trials_PR1
39.1778854
Corr_Avg_Prox_Probe_trials_PR2
28.3827116
Corr_Avg_Prox_Probe_trials_PR3
50.3575521
Place_Probe_trial_groups
G1
Testing_group_NO
1.4
NO_Arena
5
T4_Obj1
6
T4_Obj2
10
T4_TT
16
T5_Obj1
29
T5_Obj2
57
T5_TT
86
T6_Obj1
20
T6_Obj2
28
T6_TT
48
T4_DO
0.625
T5_DO
0.6627907
T6_DO
0.58333333
T4_DI
0.25
T5_DI
0.3255814
T6_DI
0.16666667
concatenated_sample_ID
5657_gp1_50_wk10_yes
BioSampleModel
Metagenome or environmental