Fecal bacterial microbiota of mus musculus
feces metagenome
host
Mus musculus
isolation_source
feces
collection_date
2017-07-06
geo_loc_name
USA: Corvallis, Oregon
lat_lon
44.565296 N 123.276016 W
samp_mat_process
flash frozen in liquid nitrogen, maintained at -80 C until processing
group
Group 2
week
7
dose
0
infection_status
No
Mouse_ID
770
Unique_Description
770_gp2_0_wk7_no
Male_Worms
0
Female_Worms
0
Total_paired_females
0
Total_worms
0
Weight_Necropsy
21.3
Date_Necropsy
2017-08-12T00:00:00
IFNy
0
IL10
3.9
IL17A
0
IL1
0
IL23
19.91
IL4
0.7
TNFalpha
2.02
MB_full
0
MB_moved
10
MBpartial50
3
MB_burried
3
OF_Day
1
OF_Arena
4
OF_Trial_Z1andZ2
13
OF_N_Ent_Z1
31
OF_Lat_T_Z1
0
OF_V_Mean_Z1
6.7
OF_Dist_Z1
1475.9
OF_Dpercentage_Z1
72.1
OF_P_Time_Z1
220.4
OF_PTpercentage_Z1
73.5
OF_N_Ent_Z2
31
OF_Lat_T_Z2
6.2
OF_V_Mean_Z2
7.2
OF_Dist_Z2
569.8
OF_Dpercentage_Z2
27.9
OF_P_Time_Z2
79.6
OF_PTpercentage_Z2
26.5
OF_N_Ent_TOTAL
62
OF_V_Mean_TOTAL
6.8
OF_Dist_TOTAL
2045.7
OF_P_Time_TOTAL
300
Corr_CD_Place_trial_E1
4272.308442589523
Corr_CD_Place_trial_E2
4426.177979458572
Corr_CD_Place_trial_E3
3965.5210937781276
Corr_CD_Place_trial_E4
4438.923274097241
Corr_CD_Place_trial_E5
5190.022792885634
Corr_CD_Place_trial_E6
5668.4186659031275
Corr_Avg_Prox_Probe_trials_PR0
40.85175906109795
Corr_Avg_Prox_Probe_trials_PR1
13.407134787041356
Corr_Avg_Prox_Probe_trials_PR2
45.57618731080883
Corr_Avg_Prox_Probe_trials_PR3
30.149174334065492
Place_Probe_trial_groups
G2
Testing_group_NO
2.4
NO_Arena
4
T4_Obj1
42
T4_Obj2
26
T4_TT
68
T5_Obj1
17
T5_Obj2
46
T5_TT
63
T6_Obj1
12
T6_Obj2
43
T6_TT
55
T4_DO
0.38235294117647056
T5_DO
0.7301587301587301
T6_DO
0.7818181818181819
T4_DI
-0.23529411764705882
T5_DI
0.4603174603174603
T6_DI
0.5636363636363636
concatenated_sample_ID
770_gp2_0_wk7_no
BioSampleModel
Metagenome or environmental