Rietzmeck 6_069_R1S1 mtCOI short metabarcoding
insect work metagenome
ENA first public
2025-08-01
INSDC center name
Thuenen-Institute of Biodiversity
INSDC status
public
Marker
COI.sh
PrimerSeq_FWD_1
GCTATGCGCGAGCtgcGGDACWGGWTGAACWGTWTAYCCHCC
PrimerSeq_FWD_2
NA
PrimerSeq_REV_1
GCGAGCTGCGCTAtgcGTRATWGCHCCDGCTARWACWGG
PrimerSeq_REV_2
NA
SampleID_ASV
F-HEAD-16-R-TAIL-7
SampleName
069
Submitter Id
F-HEAD-16-R-TAIL-7.COI_sh
TagFWD
TGGTTAG
TagREV
AGATAAC
adapters
FWD: TGGTTAG REV: AGATAAC
broad-scale environmental context
ENVO:01000245
collection date
2020-10-06
environmental medium
ENVO:02000004
geographic location (country and/or sea)
Germany
geographic location (latitude)
51.87857295
geographic location (longitude)
12.09429408
lat
51.878572951307845
local environmental context
nest tube of cavity-nesting hymenoptera
lon
12.094294084156553
multiplex identifiers
FWD: TGGTTAG REV: AGATAAC
nucleic acid amplification
PCR
nucleic acid extraction
Machery-Nagel NucleoSpin 96 Soil Kit
pcr primers
FWD: GCTATGCGCGAGCtgcGGDACWGGWTGAACWGTWTAYCCHCC REV: GCGAGCTGCGCTAtgcGTRATWGCHCCDGCTARWACWGG
project name
PilotNA
removal_date
2020-10-06
sample name
F-HEAD-16-R-TAIL-7.COI_sh
scientific_name
insect work metagenome
site
Rietzmeck
site_ID
RI
source material identifiers
6_069_R1S1
target gene
mtCOI
target subfragment
short barcoding region fwhF2+fwhR2N
trap_ID
6_069_R1S1