Badetz 5_058_R3S3 mtCOI long metabarcoding
insect work metagenome
ENA first public
2025-08-01
INSDC center name
Thuenen-Institute of Biodiversity
INSDC status
public
Marker
COI.lg
PrimerSeq_FWD_1
GCTATGCGCGAGCtgcGGDACWGGWTGAACWGTWTAYCCHCC
PrimerSeq_FWD_2
NA
PrimerSeq_REV_1
GCGAGCTGCGCTAtgcTAAACTTCAGGGTGACCAAAAAATCA
PrimerSeq_REV_2
NA
SampleID_ASV
F-HEAD-10-R-TAIL-9
SampleName
058
Submitter Id
F-HEAD-10-R-TAIL-9.COI_lg
TagFWD
GACGATG
TagREV
AATCATC
adapters
FWD: GACGATG REV: AATCATC
broad-scale environmental context
ENVO:01000245
collection date
2020-10-06
environmental medium
ENVO:02000004
geographic location (country and/or sea)
Germany
geographic location (latitude)
51.94615326
geographic location (longitude)
11.99508524
lat
51.946153263466414
local environmental context
nest tube of cavity-nesting hymenoptera
lon
11.995085235532233
multiplex identifiers
FWD: GACGATG REV: AATCATC
nucleic acid amplification
PCR
nucleic acid extraction
Machery-Nagel NucleoSpin 96 Soil Kit
pcr primers
FWD: GCTATGCGCGAGCtgcGGDACWGGWTGAACWGTWTAYCCHCC REV: GCGAGCTGCGCTAtgcTAAACTTCAGGGTGACCAAAAAATCA
project name
PilotNA
removal_date
2020-10-06
sample name
F-HEAD-10-R-TAIL-9.COI_lg
scientific_name
insect work metagenome
site
Badetz
site_ID
BAD
source material identifiers
5_058_R3S3
target gene
mtCOI
target subfragment
long barcoding region
trap_ID
5_058_R3S3