Fecal bacterial microbiota of mus musculus
feces metagenome
host
Mus musculus
isolation_source
feces
collection_date
2017-07-27
geo_loc_name
USA: Corvallis, Oregon
lat_lon
44.565296 N 123.276016 W
samp_mat_process
flash frozen in liquid nitrogen, maintained at -80 C until processing
group
Group 2
week
10
dose
100+PZQ
infection_status
Yes
Mouse_ID
5665
Unique_Description
5665_gp2_100+PZQ_wk10_yes
Male_Worms
6
Female_Worms
3
Total_paired_females
3
Total_worms
9
Weight_Necropsy
22.5
Date_Necropsy
2017-08-10T00:00:00
IFNy
NA
IL10
NA
IL17A
NA
IL1
NA
IL23
NA
IL4
NA
TNFalpha
NA
MB_full
2
MB_moved
15
MBpartial50
8
MB_burried
10
OF_Day
1
OF_Arena
3
OF_Trial_Z1andZ2
1
OF_N_Ent_Z1
35
OF_Lat_T_Z1
0
OF_V_Mean_Z1
7.3
OF_Dist_Z1
1924.2
OF_Dpercentage_Z1
72.2
OF_P_Time_Z1
262.6
OF_PTpercentage_Z1
87.5
OF_N_Ent_Z2
35
OF_Lat_T_Z2
2
OF_V_Mean_Z2
19.8
OF_Dist_Z2
739.5
OF_Dpercentage_Z2
27.8
OF_P_Time_Z2
37.4
OF_PTpercentage_Z2
12.5
OF_N_Ent_TOTAL
70
OF_V_Mean_TOTAL
8.9
OF_Dist_TOTAL
2663.7
OF_P_Time_TOTAL
300
Corr_CD_Place_trial_E1
7825.52986
Corr_CD_Place_trial_E2
5110.12856
Corr_CD_Place_trial_E3
3590.63657
Corr_CD_Place_trial_E4
3811.42632
Corr_CD_Place_trial_E5
7303.96543
Corr_CD_Place_trial_E6
4178.8596
Corr_Avg_Prox_Probe_trials_PR0
47.5751872
Corr_Avg_Prox_Probe_trials_PR1
19.7962233
Corr_Avg_Prox_Probe_trials_PR2
39.7125119
Corr_Avg_Prox_Probe_trials_PR3
31.5679502
Place_Probe_trial_groups
G2
Testing_group_NO
2.4
NO_Arena
3
T4_Obj1
28
T4_Obj2
50
T4_TT
78
T5_Obj1
14
T5_Obj2
14
T5_TT
28
T6_Obj1
34
T6_Obj2
27
T6_TT
61
T4_DO
0.64102564
T5_DO
0.5
T6_DO
0.44262295
T4_DI
0.28205128
T5_DI
0
T6_DI
-0.1147541
concatenated_sample_ID
5665_gp2_100+PZQ_wk10_yes
BioSampleModel
Metagenome or environmental