Dalchau 2_022_R4S1 mtCOI short metabarcoding
insect work metagenome
ENA first public
2025-08-01
INSDC center name
Thuenen-Institute of Biodiversity
INSDC status
public
Marker
COI.sh
PrimerSeq_FWD_1
GCTATGCGCGAGCtgcGGDACWGGWTGAACWGTWTAYCCHCC
PrimerSeq_FWD_2
NA
PrimerSeq_REV_1
GCGAGCTGCGCTAtgcGTRATWGCHCCDGCTARWACWGG
PrimerSeq_REV_2
NA
SampleID_ASV
F-HEAD-19-R-TAIL-2
SampleName
022
Submitter Id
F-HEAD-19-R-TAIL-2.COI_sh
TagFWD
TGCGAAT
TagREV
AGCGTCT
adapters
FWD: TGCGAAT REV: AGCGTCT
broad-scale environmental context
ENVO:01000245
collection date
2020-10-05
environmental medium
ENVO:02000004
geographic location (country and/or sea)
Germany
geographic location (latitude)
52.12551706
geographic location (longitude)
11.97320600
lat
52.125517061387605
local environmental context
nest tube of cavity-nesting hymenoptera
lon
11.97320600486182
multiplex identifiers
FWD: TGCGAAT REV: AGCGTCT
nucleic acid amplification
PCR
nucleic acid extraction
Machery-Nagel NucleoSpin 96 Soil Kit
pcr primers
FWD: GCTATGCGCGAGCtgcGGDACWGGWTGAACWGTWTAYCCHCC REV: GCGAGCTGCGCTAtgcGTRATWGCHCCDGCTARWACWGG
project name
PilotNA
removal_date
2020-10-05
sample name
F-HEAD-19-R-TAIL-2.COI_sh
scientific_name
insect work metagenome
site
Dalchau
site_ID
DA
source material identifiers
2_022_R4S1
target gene
mtCOI
target subfragment
short barcoding region fwhF2+fwhR2N
trap_ID
2_022_R4S1