Fecal bacterial microbiota of mus musculus
feces metagenome
host
Mus musculus
isolation_source
feces
collection_date
2017-06-29
geo_loc_name
USA: Corvallis, Oregon
lat_lon
44.565296 N 123.276016 W
samp_mat_process
flash frozen in liquid nitrogen, maintained at -80 C until processing
group
Group 1
week
7
dose
0+PZQ
infection_status
No
Mouse_ID
5676
Unique_Description
5676_gp1_0+PZQ_wk7_no
Male_Worms
0
Female_Worms
0
Total_paired_females
0
Total_worms
0
Weight_Necropsy
19.7
Date_Necropsy
2017-08-06T00:00:00
IFNy
NA
IL10
NA
IL17A
NA
IL1
NA
IL23
NA
IL4
NA
TNFalpha
NA
MB_full
0
MB_moved
8
MBpartial50
3
MB_burried
3
OF_Day
1
OF_Arena
2
OF_Trial_Z1andZ2
3
OF_N_Ent_Z1
33
OF_Lat_T_Z1
0
OF_V_Mean_Z1
7.4
OF_Dist_Z1
1966.4
OF_Dpercentage_Z1
78.9
OF_P_Time_Z1
265
OF_PTpercentage_Z1
88.3
OF_N_Ent_Z2
33
OF_Lat_T_Z2
8.8
OF_V_Mean_Z2
15
OF_Dist_Z2
525.3
OF_Dpercentage_Z2
21.1
OF_P_Time_Z2
35
OF_PTpercentage_Z2
11.7
OF_N_Ent_TOTAL
66
OF_V_Mean_TOTAL
8.3
OF_Dist_TOTAL
2491.6
OF_P_Time_TOTAL
300
Corr_CD_Place_trial_E1
13523.963685920135
Corr_CD_Place_trial_E2
10982.127100417416
Corr_CD_Place_trial_E3
7338.036203492906
Corr_CD_Place_trial_E4
2388.4695720728987
Corr_CD_Place_trial_E5
3883.1051976946005
Corr_CD_Place_trial_E6
2521.802689714044
Corr_Avg_Prox_Probe_trials_PR0
41.178828366998275
Corr_Avg_Prox_Probe_trials_PR1
39.80766952636421
Corr_Avg_Prox_Probe_trials_PR2
35.57482273083591
Corr_Avg_Prox_Probe_trials_PR3
24.52865845775944
Place_Probe_trial_groups
G1
Testing_group_NO
1.3
NO_Arena
2
T4_Obj1
20
T4_Obj2
6
T4_TT
26
T5_Obj1
59
T5_Obj2
63
T5_TT
122
T6_Obj1
24
T6_Obj2
40
T6_TT
64
T4_DO
0.23076923076923078
T5_DO
0.5163934426229508
T6_DO
0.625
T4_DI
-0.5384615384615384
T5_DI
0.03278688524590164
T6_DI
0.25
concatenated_sample_ID
5676_gp1_0+PZQ_wk7_no
BioSampleModel
Metagenome or environmental