Fecal bacterial microbiota of mus musculus
feces metagenome
host
Mus musculus
isolation_source
feces
collection_date
2017-07-06
geo_loc_name
USA: Corvallis, Oregon
lat_lon
44.565296 N 123.276016 W
samp_mat_process
flash frozen in liquid nitrogen, maintained at -80 C until processing
group
Group 2
week
7
dose
75
infection_status
Yes
Mouse_ID
783
Unique_Description
783_gp2_75_wk7_yes
Male_Worms
13
Female_Worms
8
Total_paired_females
8
Total_worms
21
Weight_Necropsy
23.4
Date_Necropsy
2017-08-15T00:00:00
IFNy
5.9
IL10
65.43
IL17A
33.6
IL1
56.28
IL23
613.16
IL4
4.09
TNFalpha
7.36
MB_full
0
MB_moved
15
MBpartial50
8
MB_burried
8
OF_Day
1
OF_Arena
3
OF_Trial_Z1andZ2
1
OF_N_Ent_Z1
40
OF_Lat_T_Z1
0
OF_V_Mean_Z1
9.4
OF_Dist_Z1
2321.8
OF_Dpercentage_Z1
73.5
OF_P_Time_Z1
248
OF_PTpercentage_Z1
82.7
OF_N_Ent_Z2
41
OF_Lat_T_Z2
13.2
OF_V_Mean_Z2
16.1
OF_Dist_Z2
838.1
OF_Dpercentage_Z2
26.5
OF_P_Time_Z2
52
OF_PTpercentage_Z2
17.3
OF_N_Ent_TOTAL
81
OF_V_Mean_TOTAL
10.5
OF_Dist_TOTAL
3159.9
OF_P_Time_TOTAL
300
Corr_CD_Place_trial_E1
6040.209750491471
Corr_CD_Place_trial_E2
9024.210079369275
Corr_CD_Place_trial_E3
8935.384341942969
Corr_CD_Place_trial_E4
3478.303300032718
Corr_CD_Place_trial_E5
4272.606879963833
Corr_CD_Place_trial_E6
1370.7938391032615
Corr_Avg_Prox_Probe_trials_PR0
43.06909135346781
Corr_Avg_Prox_Probe_trials_PR1
36.357535122047175
Corr_Avg_Prox_Probe_trials_PR2
30.60430480080174
Corr_Avg_Prox_Probe_trials_PR3
33.38594533203932
Place_Probe_trial_groups
G2
Testing_group_NO
2.5
NO_Arena
3
T4_Obj1
38
T4_Obj2
38
T4_TT
76
T5_Obj1
30
T5_Obj2
40
T5_TT
70
T6_Obj1
33
T6_Obj2
44
T6_TT
77
T4_DO
0.5
T5_DO
0.5714285714285714
T6_DO
0.5714285714285714
T4_DI
0
T5_DI
0.14285714285714285
T6_DI
0.14285714285714285
concatenated_sample_ID
783_gp2_75_wk7_yes
BioSampleModel
Metagenome or environmental