EMO BON Toralla JTB ARMS 210701 211009 SF (2)
metagenome
ENA first public
2026-04-27
INSDC center name
European Marine Biological Resource Centre
INSDC status
public
Submitter Id
EMOBON00622_COI
ampl_size
310
arms_unit_id
JTB
broad-scale environmental context
marine benthic biome [ENVO_01000024]; harbor [ENVO:00000463]; marine reef biome [ENVO:01000029]
collection date
2021-10-09
deployment_date
2021-07-01
depth
12
dna concentration
2.32
environmental medium
blended biomass derived from sessile communities colonising an autonomous reef monitoring structure [ENVO:01001863]
geographic location (country and/or sea)
Spain
geographic location (latitude)
42.2284
geographic location (locality)
1,3E+02
geographic location (longitude)
-8.7787
geographic location (ocean)
North Atlantic Ocean
geographic location (region and locality)
Spanish Atlantic Coast
ha_id
EMT21 Ha
lib_layout
PAIRED
library reads sequenced
1694521
local environmental context
sandy sediment [ENVO:01000118]
nucleic acid extraction
Quick-DNA Fecal/soil
obs_id
EMT21
pcr primers
GGWACWGGWTGAACWGTWTAYCCYCC; TAIACYTCIGGRTGICCRAARAAYCA
pcr_blank_1
CEB_DFF
pcr_blank_2
CEB_DFG
preservative
DESS
project name
EMOBON
quality_assessment
Pass
relevant standard operating procedures
Prod_ILL_BqADN_SuperLowCost_150_v3
replicate
2
resequencing
No
samp_fraction
SF
samp_site
Toralla
sample collection device
autonomous reef monitoring structure [ENVO:01001855]
sample material processing
ARMS Handbook v3.0
sample name
EMOBON00622_COI
samples_alias_orig
EMOBON00622
sampling_event
EMT21_TorallaB_Ha_210701_211009
scientific_name
metagenome
sequence_batch
Batch3.2
sequence_batch_rundate
Batch3.2_240409
sequence_quality_check
basic Genoscope QC
sequencing method
Illumina NovaSeq 6000
source material identifiers
EMOBON_EMT21_Ha_5
source_mat_id_an
EMOBON_EMT21_Ha_5_metabCOI
source_mat_id_orig
EMO BON Toralla JTB ARMS 210701 211009 SF (2)
status
sample
target gene
COI
total depth of water column
5