Jemmeritz 1_007_R4S1 ITS2 metabarcoding
insect work metagenome
ENA first public
2025-08-01
INSDC center name
Thuenen-Institute of Biodiversity
INSDC status
public
Marker
ITS2.lg
PrimerSeq_FWD_1
GCTATGCGCGAGCtgcATGCGATACTTGGTGTGAAT
PrimerSeq_FWD_2
NA
PrimerSeq_REV_1
GCGAGCTGCGCTAtgcGACGCTTCTCCAGACTACAAT
PrimerSeq_REV_2
NA
SampleID_ASV
F-HEAD-24-R-TAIL-6
SampleName
007
Submitter Id
F-HEAD-24-R-TAIL-6.ITS2_lg
TagFWD
CCAGTGC
TagREV
TACGCGA
adapters
FWD: CCAGTGC REV: TACGCGA
broad-scale environmental context
ENVO:01000245
collection date
2020-10-09
environmental medium
ENVO:02000004
geographic location (country and/or sea)
Germany
geographic location (latitude)
52.63195701
geographic location (longitude)
11.24257100
lat
52.631957009559876
local environmental context
nest tube of cavity-nesting hymenoptera
lon
11.242571000616673
multiplex identifiers
FWD: CCAGTGC REV: TACGCGA
nucleic acid amplification
PCR
nucleic acid extraction
Machery-Nagel NucleoSpin 96 Soil Kit
pcr primers
FWD: GCTATGCGCGAGCtgcATGCGATACTTGGTGTGAAT REV: GCGAGCTGCGCTAtgcGACGCTTCTCCAGACTACAAT
project name
PilotNA
removal_date
2020-10-09
sample name
F-HEAD-24-R-TAIL-6.ITS2_lg
scientific_name
insect work metagenome
site
Jemmeritz
site_ID
JE
source material identifiers
1_007_R4S1
target gene
ITS2
target subfragment
barcoding region
trap_ID
1_007_R4S1