Fecal bacterial microbiota of mus musculus
feces metagenome
host
Mus musculus
isolation_source
feces
collection_date
2017-07-20
geo_loc_name
USA: Corvallis, Oregon
lat_lon
44.565296 N 123.276016 W
samp_mat_process
flash frozen in liquid nitrogen, maintained at -80 C until processing
group
Group 1
week
10
dose
100+PZQ
infection_status
Yes
Mouse_ID
5666
Unique_Description
5666_gp1_100+PZQ_wk10_yes
Male_Worms
0
Female_Worms
0
Total_paired_females
0
Total_worms
0
Weight_Necropsy
NA
Date_Necropsy
2017-08-06T00:00:00
IFNy
0
IL10
0
IL17A
0
IL1
0.38
IL23
32.37
IL4
0
TNFalpha
1.09
MB_full
1
MB_moved
15
MBpartial50
9
MB_burried
10
OF_Day
1
OF_Arena
4
OF_Trial_Z1andZ2
1
OF_N_Ent_Z1
35
OF_Lat_T_Z1
0
OF_V_Mean_Z1
6.5
OF_Dist_Z1
1607.8
OF_Dpercentage_Z1
77.2
OF_P_Time_Z1
245.8
OF_PTpercentage_Z1
81.9
OF_N_Ent_Z2
35
OF_Lat_T_Z2
2.6
OF_V_Mean_Z2
8.8
OF_Dist_Z2
474.5
OF_Dpercentage_Z2
22.8
OF_P_Time_Z2
54.2
OF_PTpercentage_Z2
18.1
OF_N_Ent_TOTAL
70
OF_V_Mean_TOTAL
6.9
OF_Dist_TOTAL
2082.3
OF_P_Time_TOTAL
300
Corr_CD_Place_trial_E1
11704.4213
Corr_CD_Place_trial_E2
4411.38203
Corr_CD_Place_trial_E3
2209.38103
Corr_CD_Place_trial_E4
3854.25212
Corr_CD_Place_trial_E5
7129.32673
Corr_CD_Place_trial_E6
480.932913
Corr_Avg_Prox_Probe_trials_PR0
47.6763787
Corr_Avg_Prox_Probe_trials_PR1
28.4286832
Corr_Avg_Prox_Probe_trials_PR2
30.5722447
Corr_Avg_Prox_Probe_trials_PR3
27.2133444
Place_Probe_trial_groups
G1
Testing_group_NO
1.1
NO_Arena
4
T4_Obj1
63
T4_Obj2
76
T4_TT
139
T5_Obj1
29
T5_Obj2
43
T5_TT
72
T6_Obj1
14
T6_Obj2
43
T6_TT
57
T4_DO
0.54676259
T5_DO
0.59722222
T6_DO
0.75438596
T4_DI
0.09352518
T5_DI
0.19444444
T6_DI
0.50877193
Comments
Exposed and received PZQ treatment, but no worm burden after perfusion, likely cleared infection but had liver pahology. Categorized as infected.
concatenated_sample_ID
5666_gp1_100+PZQ_wk10_yes
BioSampleModel
Metagenome or environmental