Bageritz 9_103_R1S1 rbcL metabarcoding
insect work metagenome
ENA first public
2025-08-01
INSDC center name
Thuenen-Institute of Biodiversity
INSDC status
public
Marker
rbcL.sh
PrimerSeq_FWD_1
GCTATGCGCGAGCtgcCGAAATCGGTAGACGCTACG
PrimerSeq_FWD_2
NA
PrimerSeq_REV_1
GCGAGCTGCGCTAtgcCCATTGAGTCTCTGCACCTATC
PrimerSeq_REV_2
NA
SampleID_ASV
F-HEAD-1-R-TAIL-15
SampleName
103
Submitter Id
F-HEAD-1-R-TAIL-15.rbcL_sh
TagFWD
CTCCCTG
TagREV
ATCTGCG
adapters
FWD: CTCCCTG REV: ATCTGCG
broad-scale environmental context
ENVO:01000245
collection date
2020-10-07
environmental medium
ENVO:02000004
geographic location (country and/or sea)
Germany
geographic location (latitude)
51.47049209
geographic location (longitude)
12.14327401
lat
51.470492088171724
local environmental context
nest tube of cavity-nesting hymenoptera
lon
12.143274007094904
multiplex identifiers
FWD: CTCCCTG REV: ATCTGCG
nucleic acid amplification
PCR
nucleic acid extraction
Machery-Nagel NucleoSpin 96 Soil Kit
pcr primers
FWD: GCTATGCGCGAGCtgcCGAAATCGGTAGACGCTACG REV: GCGAGCTGCGCTAtgcCCATTGAGTCTCTGCACCTATC
project name
PilotNA
removal_date
2020-10-07
sample name
F-HEAD-1-R-TAIL-15.rbcL_sh
scientific_name
insect work metagenome
site
Bageritz
site_ID
BAG
source material identifiers
9_103_R1S1
target gene
rbcL
target subfragment
metabarcoding region
trap_ID
9_103_R1S1