Greudnitz 10_120_R4S1 mtCOI short metabarcoding
insect work metagenome
ENA first public
2025-08-01
INSDC center name
Thuenen-Institute of Biodiversity
INSDC status
public
Marker
COI.sh
PrimerSeq_FWD_1
GCTATGCGCGAGCtgcGGDACWGGWTGAACWGTWTAYCCHCC
PrimerSeq_FWD_2
NA
PrimerSeq_REV_1
GCGAGCTGCGCTAtgcGTRATWGCHCCDGCTARWACWGG
PrimerSeq_REV_2
NA
SampleID_ASV
F-HEAD-7-R-TAIL-5
SampleName
120
Submitter Id
F-HEAD-7-R-TAIL-5.COI_sh
TagFWD
CCAGATA
TagREV
GGGTAAT
adapters
FWD: CCAGATA REV: GGGTAAT
broad-scale environmental context
ENVO:01000245
collection date
2020-10-07
environmental medium
ENVO:02000004
geographic location (country and/or sea)
Germany
geographic location (latitude)
51.66921028
geographic location (longitude)
12.81402403
lat
51.66921028429405
local environmental context
nest tube of cavity-nesting hymenoptera
lon
12.814024027982928
multiplex identifiers
FWD: CCAGATA REV: GGGTAAT
nucleic acid amplification
PCR
nucleic acid extraction
Machery-Nagel NucleoSpin 96 Soil Kit
pcr primers
FWD: GCTATGCGCGAGCtgcGGDACWGGWTGAACWGTWTAYCCHCC REV: GCGAGCTGCGCTAtgcGTRATWGCHCCDGCTARWACWGG
project name
PilotNA
removal_date
2020-10-07
sample name
F-HEAD-7-R-TAIL-5.COI_sh
scientific_name
insect work metagenome
site
Greudnitz
site_ID
GR
source material identifiers
10_120_R4S1
target gene
mtCOI
target subfragment
short barcoding region fwhF2+fwhR2N
trap_ID
10_120_R4S1