Jemmeritz 1_012_R1S2 mtCOI long metabarcoding
insect work metagenome
ENA first public
2025-08-01
INSDC center name
Thuenen-Institute of Biodiversity
INSDC status
public
Marker
COI.lg
PrimerSeq_FWD_1
GCTATGCGCGAGCtgcGGDACWGGWTGAACWGTWTAYCCHCC
PrimerSeq_FWD_2
NA
PrimerSeq_REV_1
GCGAGCTGCGCTAtgcTAAACTTCAGGGTGACCAAAAAATCA
PrimerSeq_REV_2
NA
SampleID_ASV
F-HEAD-24-R-TAIL-1
SampleName
012
Submitter Id
F-HEAD-24-R-TAIL-1.COI_lg
TagFWD
CCAGTGC
TagREV
TCTACTG
adapters
FWD: CCAGTGC REV: TCTACTG
broad-scale environmental context
ENVO:01000245
collection date
2020-10-09
environmental medium
ENVO:02000004
geographic location (country and/or sea)
Germany
geographic location (latitude)
52.62071801
geographic location (longitude)
11.24840400
lat
52.620718009744216
local environmental context
nest tube of cavity-nesting hymenoptera
lon
11.248404000629101
multiplex identifiers
FWD: CCAGTGC REV: TCTACTG
nucleic acid amplification
PCR
nucleic acid extraction
Machery-Nagel NucleoSpin 96 Soil Kit
pcr primers
FWD: GCTATGCGCGAGCtgcGGDACWGGWTGAACWGTWTAYCCHCC REV: GCGAGCTGCGCTAtgcTAAACTTCAGGGTGACCAAAAAATCA
project name
PilotNA
removal_date
2020-10-09
sample name
F-HEAD-24-R-TAIL-1.COI_lg
scientific_name
insect work metagenome
site
Jemmeritz
site_ID
JE
source material identifiers
1_012_R1S2
target gene
mtCOI
target subfragment
long barcoding region
trap_ID
1_012_R1S2