Greudnitz 10_112_R1S1 rbcL metabarcoding
insect work metagenome
ENA first public
2025-08-01
INSDC center name
Thuenen-Institute of Biodiversity
INSDC status
public
Marker
rbcL.sh
PrimerSeq_FWD_1
GCTATGCGCGAGCtgcCGAAATCGGTAGACGCTACG
PrimerSeq_FWD_2
NA
PrimerSeq_REV_1
GCGAGCTGCGCTAtgcCCATTGAGTCTCTGCACCTATC
PrimerSeq_REV_2
NA
SampleID_ASV
F-HEAD-15-R-TAIL-16
SampleName
112
Submitter Id
F-HEAD-15-R-TAIL-16.rbcL_sh
TagFWD
GCCCAA
TagREV
TCCACAC
adapters
FWD: GCCCAA REV: TCCACAC
broad-scale environmental context
ENVO:01000245
collection date
2020-10-07
environmental medium
ENVO:02000004
geographic location (country and/or sea)
Germany
geographic location (latitude)
51.68348628
geographic location (longitude)
12.81139703
lat
51.683486282995645
local environmental context
nest tube of cavity-nesting hymenoptera
lon
12.811397027858575
multiplex identifiers
FWD: GCCCAA REV: TCCACAC
nucleic acid amplification
PCR
nucleic acid extraction
Machery-Nagel NucleoSpin 96 Soil Kit
pcr primers
FWD: GCTATGCGCGAGCtgcCGAAATCGGTAGACGCTACG REV: GCGAGCTGCGCTAtgcCCATTGAGTCTCTGCACCTATC
project name
PilotNA
removal_date
2020-10-07
sample name
F-HEAD-15-R-TAIL-16.rbcL_sh
scientific_name
insect work metagenome
site
Greudnitz
site_ID
GR
source material identifiers
10_112_R1S1
target gene
rbcL
target subfragment
metabarcoding region
trap_ID
10_112_R1S1