Jemmeritz 1_010_R4S3 ITS2 metabarcoding
insect work metagenome
ENA first public
2025-08-01
INSDC center name
Thuenen-Institute of Biodiversity
INSDC status
public
Marker
ITS2.lg
PrimerSeq_FWD_1
GCTATGCGCGAGCtgcATGCGATACTTGGTGTGAAT
PrimerSeq_FWD_2
NA
PrimerSeq_REV_1
GCGAGCTGCGCTAtgcGACGCTTCTCCAGACTACAAT
PrimerSeq_REV_2
NA
SampleID_ASV
F-HEAD-6-R-TAIL-12
SampleName
010
Submitter Id
F-HEAD-6-R-TAIL-12.ITS2_lg
TagFWD
TGATACG
TagREV
CCTTTTA
adapters
FWD: TGATACG REV: CCTTTTA
broad-scale environmental context
ENVO:01000245
collection date
2020-10-09
environmental medium
ENVO:02000004
geographic location (country and/or sea)
Germany
geographic location (latitude)
52.64923701
geographic location (longitude)
11.26064100
lat
52.64923701011951
local environmental context
nest tube of cavity-nesting hymenoptera
lon
11.260641000656646
multiplex identifiers
FWD: TGATACG REV: CCTTTTA
nucleic acid amplification
PCR
nucleic acid extraction
Machery-Nagel NucleoSpin 96 Soil Kit
pcr primers
FWD: GCTATGCGCGAGCtgcATGCGATACTTGGTGTGAAT REV: GCGAGCTGCGCTAtgcGACGCTTCTCCAGACTACAAT
project name
PilotNA
removal_date
2020-10-09
sample name
F-HEAD-6-R-TAIL-12.ITS2_lg
scientific_name
insect work metagenome
site
Jemmeritz
site_ID
JE
source material identifiers
1_010_R4S3
target gene
ITS2
target subfragment
barcoding region
trap_ID
1_010_R4S3