Fecal bacterial microbiota of mus musculus
feces metagenome
host
Mus musculus
isolation_source
feces
collection_date
2017-07-06
geo_loc_name
USA: Corvallis, Oregon
lat_lon
44.565296 N 123.276016 W
samp_mat_process
flash frozen in liquid nitrogen, maintained at -80 C until processing
group
Group 2
week
7
dose
50
infection_status
Yes
Mouse_ID
780
Unique_Description
780_gp2_50_wk7_yes
Male_Worms
0
Female_Worms
0
Total_paired_females
1
Total_worms
1
Weight_Necropsy
22.6
Date_Necropsy
2017-08-12T00:00:00
IFNy
0
IL10
0.33
IL17A
0
IL1
0
IL23
15.94
IL4
1.19
TNFalpha
0
MB_full
3
MB_moved
15
MBpartial50
10
MB_burried
13
OF_Day
1
OF_Arena
3
OF_Trial_Z1andZ2
1
OF_N_Ent_Z1
28
OF_Lat_T_Z1
0
OF_V_Mean_Z1
6.6
OF_Dist_Z1
1774.2
OF_Dpercentage_Z1
81.4
OF_P_Time_Z1
267.2
OF_PTpercentage_Z1
89.1
OF_N_Ent_Z2
28
OF_Lat_T_Z2
6.2
OF_V_Mean_Z2
12.3
OF_Dist_Z2
404.1
OF_Dpercentage_Z2
18.6
OF_P_Time_Z2
32.8
OF_PTpercentage_Z2
10.9
OF_N_Ent_TOTAL
56
OF_V_Mean_TOTAL
7.3
OF_Dist_TOTAL
2178.3
OF_P_Time_TOTAL
300
Corr_CD_Place_trial_E1
9381.757054313897
Corr_CD_Place_trial_E2
5289.354645021952
Corr_CD_Place_trial_E3
4359.81960252588
Corr_CD_Place_trial_E4
2705.5613060382984
Corr_CD_Place_trial_E5
3789.6868789677083
Corr_CD_Place_trial_E6
862.9502237531526
Corr_Avg_Prox_Probe_trials_PR0
40.792981317501535
Corr_Avg_Prox_Probe_trials_PR1
32.32374219961727
Corr_Avg_Prox_Probe_trials_PR2
37.661362051201635
Corr_Avg_Prox_Probe_trials_PR3
29.976628531886547
Place_Probe_trial_groups
G2
Testing_group_NO
2.6
NO_Arena
3
T4_Obj1
50
T4_Obj2
58
T4_TT
108
T5_Obj1
31
T5_Obj2
27
T5_TT
58
T6_Obj1
34
T6_Obj2
27
T6_TT
61
T4_DO
0.5370370370370371
T5_DO
0.46551724137931033
T6_DO
0.4426229508196721
T4_DI
0.07407407407407407
T5_DI
-0.06896551724137931
T6_DI
-0.11475409836065574
concatenated_sample_ID
780_gp2_50_wk7_yes
BioSampleModel
Metagenome or environmental