Fecal bacterial microbiota of mus musculus
feces metagenome
host
Mus musculus
isolation_source
feces
collection_date
2017-07-20
geo_loc_name
USA: Corvallis, Oregon
lat_lon
44.565296 N 123.276016 W
samp_mat_process
flash frozen in liquid nitrogen, maintained at -80 C until processing
group
Group 1
week
10
dose
50
infection_status
Yes
Mouse_ID
5685
Unique_Description
5685_gp1_50_wk10_yes
Male_Worms
4
Female_Worms
2
Total_paired_females
2
Total_worms
6
Weight_Necropsy
21.4
Date_Necropsy
2017-08-19T00:00:00
IFNy
0
IL10
5.66
IL17A
10.79
IL1
2.26
IL23
23.6
IL4
10.28
TNFalpha
6.37
MB_full
1
MB_moved
15
MBpartial50
9
MB_burried
10
OF_Day
1
OF_Arena
3
OF_Trial_Z1andZ2
8
OF_N_Ent_Z1
32
OF_Lat_T_Z1
0
OF_V_Mean_Z1
8.1
OF_Dist_Z1
2031
OF_Dpercentage_Z1
76.4
OF_P_Time_Z1
249.6
OF_PTpercentage_Z1
83.2
OF_N_Ent_Z2
32
OF_Lat_T_Z2
13
OF_V_Mean_Z2
12.4
OF_Dist_Z2
625.7
OF_Dpercentage_Z2
23.6
OF_P_Time_Z2
50.4
OF_PTpercentage_Z2
16.8
OF_N_Ent_TOTAL
64
OF_V_Mean_TOTAL
8.9
OF_Dist_TOTAL
2656.7
OF_P_Time_TOTAL
300
Corr_CD_Place_trial_E1
6673.12571
Corr_CD_Place_trial_E2
8099.06915
Corr_CD_Place_trial_E3
3875.45244
Corr_CD_Place_trial_E4
3758.31469
Corr_CD_Place_trial_E5
3689.32746
Corr_CD_Place_trial_E6
4040.03377
Corr_Avg_Prox_Probe_trials_PR0
45.0361929
Corr_Avg_Prox_Probe_trials_PR1
52.5072405
Corr_Avg_Prox_Probe_trials_PR2
39.5770379
Corr_Avg_Prox_Probe_trials_PR3
35.3397934
Place_Probe_trial_groups
G1.2
Testing_group_NO
1.8
NO_Arena
3
T4_Obj1
37
T4_Obj2
28
T4_TT
65
T5_Obj1
32
T5_Obj2
18
T5_TT
50
T6_Obj1
31
T6_Obj2
19
T6_TT
50
T4_DO
0.43076923
T5_DO
0.36
T6_DO
0.38
T4_DI
-0.1384615
T5_DI
-0.28
T6_DI
-0.24
concatenated_sample_ID
5685_gp1_50_wk10_yes
BioSampleModel
Metagenome or environmental