Fecal bacterial microbiota of mus musculus
feces metagenome
host
Mus musculus
isolation_source
feces
collection_date
2017-07-06
geo_loc_name
USA: Corvallis, Oregon
lat_lon
44.565296 N 123.276016 W
samp_mat_process
flash frozen in liquid nitrogen, maintained at -80 C until processing
group
Group 2
week
7
dose
100+PZQ
infection_status
Yes
Mouse_ID
5664
Unique_Description
5664_gp2_70+PZQ_wk7_yes
Male_Worms
4
Female_Worms
2
Total_paired_females
2
Total_worms
6
Weight_Necropsy
22.4
Date_Necropsy
2017-08-09T00:00:00
IFNy
NA
IL10
NA
IL17A
NA
IL1
NA
IL23
NA
IL4
NA
TNFalpha
NA
MB_full
1
MB_moved
14
MBpartial50
6
MB_burried
7
OF_Day
1
OF_Arena
2
OF_Trial_Z1andZ2
3
OF_N_Ent_Z1
30
OF_Lat_T_Z1
0
OF_V_Mean_Z1
5.9
OF_Dist_Z1
1300.9
OF_Dpercentage_Z1
69.9
OF_P_Time_Z1
219.6
OF_PTpercentage_Z1
73.2
OF_N_Ent_Z2
30
OF_Lat_T_Z2
8.8
OF_V_Mean_Z2
7
OF_Dist_Z2
561.1
OF_Dpercentage_Z2
30.1
OF_P_Time_Z2
80.4
OF_PTpercentage_Z2
26.8
OF_N_Ent_TOTAL
60
OF_V_Mean_TOTAL
6.2
OF_Dist_TOTAL
1862
OF_P_Time_TOTAL
300
Corr_CD_Place_trial_E1
7457.29178094321
Corr_CD_Place_trial_E2
3177.637044982661
Corr_CD_Place_trial_E3
1853.731450214428
Corr_CD_Place_trial_E4
3619.2204005631784
Corr_CD_Place_trial_E5
1074.9108793906585
Corr_CD_Place_trial_E6
1011.7719592576336
Corr_Avg_Prox_Probe_trials_PR0
29.714853719089376
Corr_Avg_Prox_Probe_trials_PR1
38.06930937367031
Corr_Avg_Prox_Probe_trials_PR2
38.42041987176079
Corr_Avg_Prox_Probe_trials_PR3
28.23711155123731
Place_Probe_trial_groups
G1.2
Testing_group_NO
2.3
NO_Arena
2
T4_Obj1
16
T4_Obj2
5
T4_TT
21
T5_Obj1
9
T5_Obj2
13
T5_TT
22
T6_Obj1
15
T6_Obj2
19
T6_TT
34
T4_DO
0.23809523809523808
T5_DO
0.5909090909090909
T6_DO
0.5588235294117647
T4_DI
-0.5238095238095238
T5_DI
0.18181818181818182
T6_DI
0.11764705882352941
concatenated_sample_ID
5664_gp2_70+PZQ_wk7_yes
BioSampleModel
Metagenome or environmental