Behnsdorf 4_038_R1S2 rbcL metabarcoding
insect work metagenome
ENA first public
2025-08-01
INSDC center name
Thuenen-Institute of Biodiversity
INSDC status
public
Marker
rbcL.sh
PrimerSeq_FWD_1
GCTATGCGCGAGCtgcCGAAATCGGTAGACGCTACG
PrimerSeq_FWD_2
NA
PrimerSeq_REV_1
GCGAGCTGCGCTAtgcCCATTGAGTCTCTGCACCTATC
PrimerSeq_REV_2
NA
SampleID_ASV
F-HEAD-11-R-TAIL-13
SampleName
038
Submitter Id
F-HEAD-11-R-TAIL-13.rbcL_sh
TagFWD
AAATCTT
TagREV
AGCTCGC
adapters
FWD: AAATCTT REV: AGCTCGC
broad-scale environmental context
ENVO:01000245
collection date
2020-10-09
environmental medium
ENVO:02000004
geographic location (country and/or sea)
Germany
geographic location (latitude)
52.30755301
geographic location (longitude)
11.14094600
lat
52.30755300686249
local environmental context
nest tube of cavity-nesting hymenoptera
lon
11.140946000423542
multiplex identifiers
FWD: AAATCTT REV: AGCTCGC
nucleic acid amplification
PCR
nucleic acid extraction
Machery-Nagel NucleoSpin 96 Soil Kit
pcr primers
FWD: GCTATGCGCGAGCtgcCGAAATCGGTAGACGCTACG REV: GCGAGCTGCGCTAtgcCCATTGAGTCTCTGCACCTATC
project name
PilotNA
removal_date
2020-10-09
sample name
F-HEAD-11-R-TAIL-13.rbcL_sh
scientific_name
insect work metagenome
site
Behnsdorf
site_ID
BE
source material identifiers
4_038_R1S2
target gene
rbcL
target subfragment
metabarcoding region
trap_ID
4_038_R1S2