Fecal bacterial microbiota of mus musculus
feces metagenome
host
Mus musculus
isolation_source
feces
collection_date
2017-06-29
geo_loc_name
USA: Corvallis, Oregon
lat_lon
44.565296 N 123.276016 W
samp_mat_process
flash frozen in liquid nitrogen, maintained at -80 C until processing
group
Group 1
week
7
dose
75
infection_status
Yes
Mouse_ID
5688
Unique_Description
5688_gp1_75_wk7_yes
Male_Worms
9
Female_Worms
7
Total_paired_females
7
Total_worms
16
Weight_Necropsy
NA
Date_Necropsy
2017-08-05T00:00:00
IFNy
NA
IL10
NA
IL17A
NA
IL1
NA
IL23
NA
IL4
NA
TNFalpha
NA
MB_full
0
MB_moved
14
MBpartial50
2
MB_burried
2
OF_Day
1
OF_Arena
3
OF_Trial_Z1andZ2
7
OF_N_Ent_Z1
29
OF_Lat_T_Z1
0
OF_V_Mean_Z1
9
OF_Dist_Z1
2399.7
OF_Dpercentage_Z1
80.7
OF_P_Time_Z1
268
OF_PTpercentage_Z1
89.3
OF_N_Ent_Z2
29
OF_Lat_T_Z2
9.8
OF_V_Mean_Z2
17.9
OF_Dist_Z2
573.4
OF_Dpercentage_Z2
19.3
OF_P_Time_Z2
32
OF_PTpercentage_Z2
10.7
OF_N_Ent_TOTAL
58
OF_V_Mean_TOTAL
9.9
OF_Dist_TOTAL
2973.1
OF_P_Time_TOTAL
300
Corr_CD_Place_trial_E1
NA
Corr_CD_Place_trial_E2
NA
Corr_CD_Place_trial_E3
NA
Corr_CD_Place_trial_E4
NA
Corr_CD_Place_trial_E5
NA
Corr_CD_Place_trial_E6
NA
Corr_Avg_Prox_Probe_trials_PR0
NA
Corr_Avg_Prox_Probe_trials_PR1
NA
Corr_Avg_Prox_Probe_trials_PR2
NA
Corr_Avg_Prox_Probe_trials_PR3
NA
Place_Probe_trial_groups
NA
Testing_group_NO
1.7
NO_Arena
3
T4_Obj1
52
T4_Obj2
44
T4_TT
96
T5_Obj1
30
T5_Obj2
15
T5_TT
45
T6_Obj1
23
T6_Obj2
32
T6_TT
55
T4_DO
0.4583333333333333
T5_DO
0.3333333333333333
T6_DO
0.5818181818181818
T4_DI
-0.08333333333333333
T5_DI
-0.3333333333333333
T6_DI
0.16363636363636364
concatenated_sample_ID
5688_gp1_75_wk7_yes
BioSampleModel
Metagenome or environmental