Fecal bacterial microbiota of mus musculus
feces metagenome
host
Mus musculus
isolation_source
feces
collection_date
2017-07-27
geo_loc_name
USA: Corvallis, Oregon
lat_lon
44.565296 N 123.276016 W
samp_mat_process
flash frozen in liquid nitrogen, maintained at -80 C until processing
group
Group 2
week
10
dose
75
infection_status
Yes
Mouse_ID
784
Unique_Description
784_gp2_75_wk10_yes
Male_Worms
4
Female_Worms
3
Total_paired_females
3
Total_worms
7
Weight_Necropsy
21.4
Date_Necropsy
2017-08-15T00:00:00
IFNy
20.67
IL10
210.55
IL17A
40.82
IL1
79.11
IL23
5842.3
IL4
33.6
TNFalpha
7.84
MB_full
1
MB_moved
13
MBpartial50
2
MB_burried
3
OF_Day
1
OF_Arena
4
OF_Trial_Z1andZ2
15
OF_N_Ent_Z1
36
OF_Lat_T_Z1
0
OF_V_Mean_Z1
8.8
OF_Dist_Z1
2065.1
OF_Dpercentage_Z1
73.8
OF_P_Time_Z1
233.8
OF_PTpercentage_Z1
77.9
OF_N_Ent_Z2
36
OF_Lat_T_Z2
4.4
OF_V_Mean_Z2
11.1
OF_Dist_Z2
733.3
OF_Dpercentage_Z2
26.2
OF_P_Time_Z2
66.2
OF_PTpercentage_Z2
22.1
OF_N_Ent_TOTAL
72
OF_V_Mean_TOTAL
9.3
OF_Dist_TOTAL
2798.3
OF_P_Time_TOTAL
300
Corr_CD_Place_trial_E1
8616.9026
Corr_CD_Place_trial_E2
6594.9721
Corr_CD_Place_trial_E3
2259.24183
Corr_CD_Place_trial_E4
2496.48684
Corr_CD_Place_trial_E5
3130.78877
Corr_CD_Place_trial_E6
1029.37658
Corr_Avg_Prox_Probe_trials_PR0
47.440029
Corr_Avg_Prox_Probe_trials_PR1
31.4713899
Corr_Avg_Prox_Probe_trials_PR2
25.2461665
Corr_Avg_Prox_Probe_trials_PR3
22.581818
Place_Probe_trial_groups
G2
Testing_group_NO
2.6
NO_Arena
4
T4_Obj1
50
T4_Obj2
41
T4_TT
91
T5_Obj1
28
T5_Obj2
68
T5_TT
96
T6_Obj1
14
T6_Obj2
43
T6_TT
57
T4_DO
0.45054945
T5_DO
0.70833333
T6_DO
0.75438596
T4_DI
-0.0989011
T5_DI
0.41666667
T6_DI
0.50877193
concatenated_sample_ID
784_gp2_75_wk10_yes
BioSampleModel
Metagenome or environmental