Badetz 5_050_R3S2 rbcL metabarcoding
insect work metagenome
ENA first public
2025-08-01
INSDC center name
Thuenen-Institute of Biodiversity
INSDC status
public
Marker
rbcL.sh
PrimerSeq_FWD_1
GCTATGCGCGAGCtgcCGAAATCGGTAGACGCTACG
PrimerSeq_FWD_2
NA
PrimerSeq_REV_1
GCGAGCTGCGCTAtgcCCATTGAGTCTCTGCACCTATC
PrimerSeq_REV_2
NA
SampleID_ASV
F-HEAD-1-R-TAIL-16
SampleName
050
Submitter Id
F-HEAD-1-R-TAIL-16.rbcL_sh
TagFWD
CTCCCTG
TagREV
TCCACAC
adapters
FWD: CTCCCTG REV: TCCACAC
broad-scale environmental context
ENVO:01000245
collection date
2020-10-06
environmental medium
ENVO:02000004
geographic location (country and/or sea)
Germany
geographic location (latitude)
51.93990016
geographic location (longitude)
11.99222743
lat
51.93990015627532
local environmental context
nest tube of cavity-nesting hymenoptera
lon
11.99222742696404
multiplex identifiers
FWD: CTCCCTG REV: TCCACAC
nucleic acid amplification
PCR
nucleic acid extraction
Machery-Nagel NucleoSpin 96 Soil Kit
pcr primers
FWD: GCTATGCGCGAGCtgcCGAAATCGGTAGACGCTACG REV: GCGAGCTGCGCTAtgcCCATTGAGTCTCTGCACCTATC
project name
PilotNA
removal_date
2020-10-06
sample name
F-HEAD-1-R-TAIL-16.rbcL_sh
scientific_name
insect work metagenome
site
Badetz
site_ID
BAD
source material identifiers
5_050_R3S2
target gene
rbcL
target subfragment
metabarcoding region
trap_ID
5_050_R3S2