Badetz 5_051_R4S2 ITS2 metabarcoding
insect work metagenome
ENA first public
2025-08-01
INSDC center name
Thuenen-Institute of Biodiversity
INSDC status
public
Marker
ITS2.lg
PrimerSeq_FWD_1
GCTATGCGCGAGCtgcATGCGATACTTGGTGTGAAT
PrimerSeq_FWD_2
NA
PrimerSeq_REV_1
GCGAGCTGCGCTAtgcGACGCTTCTCCAGACTACAAT
PrimerSeq_REV_2
NA
SampleID_ASV
F-HEAD-14-R-TAIL-2
SampleName
051
Submitter Id
F-HEAD-14-R-TAIL-2.ITS2_lg
TagFWD
GCTGATC
TagREV
AGCGTCT
adapters
FWD: GCTGATC REV: AGCGTCT
broad-scale environmental context
ENVO:01000245
collection date
2020-10-06
environmental medium
ENVO:02000004
geographic location (country and/or sea)
Germany
geographic location (latitude)
51.93379524
geographic location (longitude)
11.99153273
lat
51.93379524474746
local environmental context
nest tube of cavity-nesting hymenoptera
lon
11.991532731132928
multiplex identifiers
FWD: GCTGATC REV: AGCGTCT
nucleic acid amplification
PCR
nucleic acid extraction
Machery-Nagel NucleoSpin 96 Soil Kit
pcr primers
FWD: GCTATGCGCGAGCtgcATGCGATACTTGGTGTGAAT REV: GCGAGCTGCGCTAtgcGACGCTTCTCCAGACTACAAT
project name
PilotNA
removal_date
2020-10-06
sample name
F-HEAD-14-R-TAIL-2.ITS2_lg
scientific_name
insect work metagenome
site
Badetz
site_ID
BAD
source material identifiers
5_051_R4S2
target gene
ITS2
target subfragment
barcoding region
trap_ID
5_051_R4S2