Kalitz 3_029_R4S3 mtCOI short metabarcoding
insect work metagenome
ENA first public
2025-08-01
INSDC center name
Thuenen-Institute of Biodiversity
INSDC status
public
Marker
COI.sh
PrimerSeq_FWD_1
GCTATGCGCGAGCtgcGGDACWGGWTGAACWGTWTAYCCHCC
PrimerSeq_FWD_2
NA
PrimerSeq_REV_1
GCGAGCTGCGCTAtgcGTRATWGCHCCDGCTARWACWGG
PrimerSeq_REV_2
NA
SampleID_ASV
F-HEAD-19-R-TAIL-5
SampleName
029
Submitter Id
F-HEAD-19-R-TAIL-5.COI_sh
TagFWD
TGCGAAT
TagREV
GGGTAAT
adapters
FWD: TGCGAAT REV: GGGTAAT
broad-scale environmental context
ENVO:01000245
collection date
2020-10-05
environmental medium
ENVO:02000004
geographic location (country and/or sea)
Germany
geographic location (latitude)
52.08989607
geographic location (longitude)
12.03386001
lat
52.08989606962155
local environmental context
nest tube of cavity-nesting hymenoptera
lon
12.033860005609492
multiplex identifiers
FWD: TGCGAAT REV: GGGTAAT
nucleic acid amplification
PCR
nucleic acid extraction
Machery-Nagel NucleoSpin 96 Soil Kit
pcr primers
FWD: GCTATGCGCGAGCtgcGGDACWGGWTGAACWGTWTAYCCHCC REV: GCGAGCTGCGCTAtgcGTRATWGCHCCDGCTARWACWGG
project name
PilotNA
removal_date
2020-10-05
sample name
F-HEAD-19-R-TAIL-5.COI_sh
scientific_name
insect work metagenome
site
Kalitz
site_ID
KA
source material identifiers
3_029_R4S3
target gene
mtCOI
target subfragment
short barcoding region fwhF2+fwhR2N
trap_ID
3_029_R4S3