ARMS_TZS_ANG_210608-211124_PSF40_DMSO_B
metagenome
ENA first public
2026-04-27
INSDC center name
European Marine Biological Resource Centre
INSDC status
public
Submitter Id
EMOBON00794_COI
ampl_size
310
arms_unit_id
ANG
broad-scale environmental context
marine benthic biome [ENVO_01000024]; marine park area [ENVO:00000362]; marine reef biome [ENVO:01000029]
collection date
2021-11-24
crate_cover
Yes
deployment_date
2021-06-08
depth
4
dna concentration
34.8
environmental medium
blended biomass derived from sessile communities colonising an autonomous reef monitoring structure [ENVO:01001863]
geographic location (country and/or sea)
Finland
geographic location (latitude)
59.841505
geographic location (locality)
Tammisaaren Ja Hangon Saariston Ja Pohjanpitäjänlahden Merensuojelualue
geographic location (longitude)
23.248879
geographic location (ocean)
Baltic Sea
geographic location (region and locality)
Finnish part of the Baltic Sea
ha_id
TZS Ha
lib_layout
PAIRED
library reads sequenced
5137370
local environmental context
sandy sediment [ENVO:01000118]
nucleic acid extraction
Quick-DNA Fecal/soil
obs_id
TZS_STOR
pcr primers
GGWACWGGWTGAACWGTWTAYCCYCC; TAIACYTCIGGRTGICCRAARAAYCA
pcr_blank_1
CEB_DFD
pcr_blank_2
CEB_DFE
preservative
DESS
project name
EMOBON
quality_assessment
Pass
relevant standard operating procedures
Prod_ILL_BqADN_SuperLowCost_150_v3
replicate
2
resequencing
No
samp_fraction
SF
samp_site
Ang
sample collection device
autonomous reef monitoring structure [ENVO:01001855]
sample material processing
ARMS Handbook v3.0
sample name
EMOBON00794_COI
samples_alias_orig
EMOBON00794
sampling_event
TZS_Angbat_Ha_210608_211124
scientific_name
metagenome
sequence_batch
Batch3.2
sequence_batch_rundate
Batch3.2_240409
sequence_quality_check
basic Genoscope QC
sequencing method
Illumina NovaSeq 6000
size_filter
40
source material identifiers
EMOBON_TZS_Ha_9
source_mat_id_an
EMOBON_TZS_Ha_9_metabCOI
source_mat_id_orig
ARMS_TZS_ANG_210608-211124_PSF40_DMSO_B
status
sample
target gene
COI
total depth of water column
4