Bageritz 9_098_R1S2 rbcL metabarcoding
insect work metagenome
ENA first public
2025-08-01
INSDC center name
Thuenen-Institute of Biodiversity
INSDC status
public
Marker
rbcL.sh
PrimerSeq_FWD_1
GCTATGCGCGAGCtgcCGAAATCGGTAGACGCTACG
PrimerSeq_FWD_2
NA
PrimerSeq_REV_1
GCGAGCTGCGCTAtgcCCATTGAGTCTCTGCACCTATC
PrimerSeq_REV_2
NA
SampleID_ASV
F-HEAD-6-R-TAIL-6
SampleName
098
Submitter Id
F-HEAD-6-R-TAIL-6.rbcL_sh
TagFWD
TGATACG
TagREV
TACGCGA
adapters
FWD: TGATACG REV: TACGCGA
broad-scale environmental context
ENVO:01000245
collection date
2020-10-07
environmental medium
ENVO:02000004
geographic location (country and/or sea)
Germany
geographic location (latitude)
51.48358309
geographic location (longitude)
12.15937001
lat
51.48358309094232
local environmental context
nest tube of cavity-nesting hymenoptera
lon
12.159370007359609
multiplex identifiers
FWD: TGATACG REV: TACGCGA
nucleic acid amplification
PCR
nucleic acid extraction
Machery-Nagel NucleoSpin 96 Soil Kit
pcr primers
FWD: GCTATGCGCGAGCtgcCGAAATCGGTAGACGCTACG REV: GCGAGCTGCGCTAtgcCCATTGAGTCTCTGCACCTATC
project name
PilotNA
removal_date
2020-10-07
sample name
F-HEAD-6-R-TAIL-6.rbcL_sh
scientific_name
insect work metagenome
site
Bageritz
site_ID
BAG
source material identifiers
9_098_R1S2
target gene
rbcL
target subfragment
metabarcoding region
trap_ID
9_098_R1S2