EMO BON CPOWERC HA 20210623 20220622 MF500 (1)
metagenome
ENA first public
2026-04-27
INSDC center name
European Marine Biological Resource Centre
INSDC status
public
Submitter Id
EMOBON00610_18S
ampl_size
350
arms_unit_id
CPOWERC
broad-scale environmental context
marine biome [ENVO:00000447];marine benthic biome[ENVO:01000024];marine reef biome [ENVO:01000029];marine subtidal rocky reef biome [ENVO:01000050]
collection date
2022-06-22
crate_cover
Yes
deployment_date
2021-06-23
depth
26
dna concentration
1357
environmental medium
biomass derived from sieving motile communities present in the retrieval tub of an autonomous reef monitoring structure through a 500 micrometre mesh [ENVO:01001901]
geographic location (country and/or sea)
Belgium
geographic location (latitude)
51.579833
geographic location (locality)
Belgian part of the North Sea
geographic location (longitude)
2.9955
geographic location (ocean)
North Atlantic Ocean
geographic location (region and locality)
North Sea
ha_id
BPNS Ha
lib_layout
PAIRED
library reads sequenced
3163188
local environmental context
artificial reef [ENVO:00000149]
nucleic acid extraction
Quick-DNA Fecal/soil
obs_id
BPNS
pcr primers
GCTTGTCTCAAAGATTAAGCC; CCTGCTGCCTTCCTTRGA
pcr_blank_1
CEB_DFR
pcr_blank_2
CEB_DFS
preservative
DESS
project name
EMOBON
quality_assessment
Pass
relevant standard operating procedures
Prod_ILL_BqADN_SuperLowCost_150_v3
replicate
1
resequencing
No
samp_fraction
MF
samp_site
CPOWER
sample collection device
autonomous reef monitoring structure [ENVO:01001855]
sample name
EMOBON00610_18S
samples_alias_orig
EMOBON00610
sampling_event
BPNS_CPOWERC_HA_210623_220622
scientific_name
metagenome
sequence_batch
Batch3.2
sequence_batch_rundate
Batch3.2_240411
sequence_quality_check
basic Genoscope QC
sequencing method
Illumina NovaSeq 6000
size_filter
500
source material identifiers
EMOBON_BPNS_Ha_18
source_mat_id_an
EMOBON_BPNS_Ha_18_metab18SV1V2
source_mat_id_orig
EMO BON CPOWERC HA 20210623 20220622 MF500 (1)
status
sample
target gene
18S rRNA
target subfragment
V1-V2
total depth of water column
26