Rietzmeck 6_065_R2S1 mtCOI short metabarcoding
insect work metagenome
ENA first public
2025-08-01
INSDC center name
Thuenen-Institute of Biodiversity
INSDC status
public
Marker
COI.sh
PrimerSeq_FWD_1
GCTATGCGCGAGCtgcGGDACWGGWTGAACWGTWTAYCCHCC
PrimerSeq_FWD_2
NA
PrimerSeq_REV_1
GCGAGCTGCGCTAtgcGTRATWGCHCCDGCTARWACWGG
PrimerSeq_REV_2
NA
SampleID_ASV
F-HEAD-5-R-TAIL-13
SampleName
065
Submitter Id
F-HEAD-5-R-TAIL-13.COI_sh
TagFWD
CAAGCCC
TagREV
AGCTCGC
adapters
FWD: CAAGCCC REV: AGCTCGC
broad-scale environmental context
ENVO:01000245
collection date
2020-10-06
environmental medium
ENVO:02000004
geographic location (country and/or sea)
Germany
geographic location (latitude)
51.88807669
geographic location (longitude)
12.14391342
lat
51.888076685652095
local environmental context
nest tube of cavity-nesting hymenoptera
lon
12.143913419411817
multiplex identifiers
FWD: CAAGCCC REV: AGCTCGC
nucleic acid amplification
PCR
nucleic acid extraction
Machery-Nagel NucleoSpin 96 Soil Kit
pcr primers
FWD: GCTATGCGCGAGCtgcGGDACWGGWTGAACWGTWTAYCCHCC REV: GCGAGCTGCGCTAtgcGTRATWGCHCCDGCTARWACWGG
project name
PilotNA
removal_date
2020-10-06
sample name
F-HEAD-5-R-TAIL-13.COI_sh
scientific_name
insect work metagenome
site
Rietzmeck
site_ID
RI
source material identifiers
6_065_R2S1
target gene
mtCOI
target subfragment
short barcoding region fwhF2+fwhR2N
trap_ID
6_065_R2S1