Bageritz 9_108_R4S1 ITS2 metabarcoding
insect work metagenome
ENA first public
2025-08-01
INSDC center name
Thuenen-Institute of Biodiversity
INSDC status
public
Marker
ITS2.lg
PrimerSeq_FWD_1
GCTATGCGCGAGCtgcATGCGATACTTGGTGTGAAT
PrimerSeq_FWD_2
NA
PrimerSeq_REV_1
GCGAGCTGCGCTAtgcGACGCTTCTCCAGACTACAAT
PrimerSeq_REV_2
NA
SampleID_ASV
F-HEAD-17-R-TAIL-3
SampleName
108
Submitter Id
F-HEAD-17-R-TAIL-3.ITS2_lg
TagFWD
TCAGTTG
TagREV
GTCGCCA
adapters
FWD: TCAGTTG REV: GTCGCCA
broad-scale environmental context
ENVO:01000245
collection date
2020-10-07
environmental medium
ENVO:02000004
geographic location (country and/or sea)
Germany
geographic location (latitude)
51.46441309
geographic location (longitude)
12.16257901
lat
51.4644130915611
local environmental context
nest tube of cavity-nesting hymenoptera
lon
12.162579007408887
multiplex identifiers
FWD: TCAGTTG REV: GTCGCCA
nucleic acid amplification
PCR
nucleic acid extraction
Machery-Nagel NucleoSpin 96 Soil Kit
pcr primers
FWD: GCTATGCGCGAGCtgcATGCGATACTTGGTGTGAAT REV: GCGAGCTGCGCTAtgcGACGCTTCTCCAGACTACAAT
project name
PilotNA
removal_date
2020-10-07
sample name
F-HEAD-17-R-TAIL-3.ITS2_lg
scientific_name
insect work metagenome
site
Bageritz
site_ID
BAG
source material identifiers
9_108_R4S1
target gene
ITS2
target subfragment
barcoding region
trap_ID
9_108_R4S1