ARMS_Cheshire_20191210_20220221_SF_R1
metagenome
ENA first public
2026-04-27
INSDC center name
European Marine Biological Resource Centre
INSDC status
public
Submitter Id
EMOBON00759_COI
ampl_size
310
arms_unit_id
Cheshire1
broad-scale environmental context
marine benthic biome [ENVO_01000024]; natural environment [ENVO:01000951]
collection date
2022-02-21
deployment_date
2019-12-10
depth
20
dna concentration
5.4
environmental medium
blended biomass derived from sessile communities colonising an autonomous reef monitoring structure [ENVO:01001863]
geographic location (country and/or sea)
United Kingdom
geographic location (latitude)
-67.57383333
geographic location (locality)
Rothera Point
geographic location (longitude)
-68.12523333
geographic location (ocean)
Southern Ocean
geographic location (region and locality)
Rothera Point
ha_id
BAS Ha
lib_layout
PAIRED
library reads sequenced
1441355
local environmental context
marine subtidal rocky reef biome [ENVO:01000050], rocky reef [ENVO:00000130], artificial reef [ENVO:00000149]
nucleic acid extraction
Quick-DNA Fecal/soil
obs_id
BAS
pcr primers
GGWACWGGWTGAACWGTWTAYCCYCC; TAIACYTCIGGRTGICCRAARAAYCA
pcr_blank_1
CEB_DFD
pcr_blank_2
CEB_DFE
preservative
DESS
project name
EMOBON
quality_assessment
Pass
relevant standard operating procedures
Prod_ILL_BqADN_SuperLowCost_150_v3
replicate
1
resequencing
No
samp_fraction
SF
samp_site
Rothera
sample collection device
autonomous reef monitoring structure [ENVO:01001855]
sample material processing
ARMS Handbook v3.2
sample name
EMOBON00759_COI
samples_alias_orig
EMOBON00759
sampling_event
Rothera_Cheshire_Ha_191210_220221
scientific_name
metagenome
sequence_batch
Batch3.2
sequence_batch_rundate
Batch3.2_240409
sequence_quality_check
basic Genoscope QC
sequencing method
Illumina NovaSeq 6000
source material identifiers
EMOBON_BAS_Ha_3
source_mat_id_an
EMOBON_BAS_Ha_3_metabCOI
source_mat_id_orig
ARMS_Cheshire_20191210_20220221_SF_R1
status
sample
target gene
COI