Jemmeritz 1_011_R1S3 rbcL metabarcoding
insect work metagenome
ENA first public
2025-08-01
INSDC center name
Thuenen-Institute of Biodiversity
INSDC status
public
Marker
rbcL.sh
PrimerSeq_FWD_1
GCTATGCGCGAGCtgcCGAAATCGGTAGACGCTACG
PrimerSeq_FWD_2
NA
PrimerSeq_REV_1
GCGAGCTGCGCTAtgcCCATTGAGTCTCTGCACCTATC
PrimerSeq_REV_2
NA
SampleID_ASV
F-HEAD-11-R-TAIL-5
SampleName
011
Submitter Id
F-HEAD-11-R-TAIL-5.rbcL_sh
TagFWD
AAATCTT
TagREV
GGGTAAT
adapters
FWD: AAATCTT REV: GGGTAAT
broad-scale environmental context
ENVO:01000245
collection date
2020-10-09
environmental medium
ENVO:02000004
geographic location (country and/or sea)
Germany
geographic location (latitude)
52.63896701
geographic location (longitude)
11.25900300
lat
52.63896701007113
local environmental context
nest tube of cavity-nesting hymenoptera
lon
11.259003000652816
multiplex identifiers
FWD: AAATCTT REV: GGGTAAT
nucleic acid amplification
PCR
nucleic acid extraction
Machery-Nagel NucleoSpin 96 Soil Kit
pcr primers
FWD: GCTATGCGCGAGCtgcCGAAATCGGTAGACGCTACG REV: GCGAGCTGCGCTAtgcCCATTGAGTCTCTGCACCTATC
project name
PilotNA
removal_date
2020-10-09
sample name
F-HEAD-11-R-TAIL-5.rbcL_sh
scientific_name
insect work metagenome
site
Jemmeritz
site_ID
JE
source material identifiers
1_011_R1S3
target gene
rbcL
target subfragment
metabarcoding region
trap_ID
1_011_R1S3