Dalchau 2_024_R3S1 rbcL metabarcoding
insect work metagenome
ENA first public
2025-08-01
INSDC center name
Thuenen-Institute of Biodiversity
INSDC status
public
Marker
rbcL.sh
PrimerSeq_FWD_1
GCTATGCGCGAGCtgcCGAAATCGGTAGACGCTACG
PrimerSeq_FWD_2
NA
PrimerSeq_REV_1
GCGAGCTGCGCTAtgcCCATTGAGTCTCTGCACCTATC
PrimerSeq_REV_2
NA
SampleID_ASV
F-HEAD-3-R-TAIL-13
SampleName
024
Submitter Id
F-HEAD-3-R-TAIL-13.rbcL_sh
TagFWD
TAACTAG
TagREV
AGCTCGC
adapters
FWD: TAACTAG REV: AGCTCGC
broad-scale environmental context
ENVO:01000245
collection date
2020-10-05
environmental medium
ENVO:02000004
geographic location (country and/or sea)
Germany
geographic location (latitude)
52.11689806
geographic location (longitude)
11.97795700
lat
52.116898062013405
local environmental context
nest tube of cavity-nesting hymenoptera
lon
11.97795700491638
multiplex identifiers
FWD: TAACTAG REV: AGCTCGC
nucleic acid amplification
PCR
nucleic acid extraction
Machery-Nagel NucleoSpin 96 Soil Kit
pcr primers
FWD: GCTATGCGCGAGCtgcCGAAATCGGTAGACGCTACG REV: GCGAGCTGCGCTAtgcCCATTGAGTCTCTGCACCTATC
project name
PilotNA
removal_date
2020-10-05
sample name
F-HEAD-3-R-TAIL-13.rbcL_sh
scientific_name
insect work metagenome
site
Dalchau
site_ID
DA
source material identifiers
2_024_R3S1
target gene
rbcL
target subfragment
metabarcoding region
trap_ID
2_024_R3S1