Badetz 5_055_R1S3 mtCOI short metabarcoding
insect work metagenome
ENA first public
2025-08-01
INSDC center name
Thuenen-Institute of Biodiversity
INSDC status
public
Marker
COI.sh
PrimerSeq_FWD_1
GCTATGCGCGAGCtgcGGDACWGGWTGAACWGTWTAYCCHCC
PrimerSeq_FWD_2
NA
PrimerSeq_REV_1
GCGAGCTGCGCTAtgcGTRATWGCHCCDGCTARWACWGG
PrimerSeq_REV_2
NA
SampleID_ASV
F-HEAD-4-R-TAIL-1
SampleName
055
Submitter Id
F-HEAD-4-R-TAIL-1.COI_sh
TagFWD
CACTTAT
TagREV
TCTACTG
adapters
FWD: CACTTAT REV: TCTACTG
broad-scale environmental context
ENVO:01000245
collection date
2020-10-06
environmental medium
ENVO:02000004
geographic location (country and/or sea)
Germany
geographic location (latitude)
51.95081851
geographic location (longitude)
11.97531495
lat
51.95081851369873
local environmental context
nest tube of cavity-nesting hymenoptera
lon
11.975314952381643
multiplex identifiers
FWD: CACTTAT REV: TCTACTG
nucleic acid amplification
PCR
nucleic acid extraction
Machery-Nagel NucleoSpin 96 Soil Kit
pcr primers
FWD: GCTATGCGCGAGCtgcGGDACWGGWTGAACWGTWTAYCCHCC REV: GCGAGCTGCGCTAtgcGTRATWGCHCCDGCTARWACWGG
project name
PilotNA
removal_date
2020-10-06
sample name
F-HEAD-4-R-TAIL-1.COI_sh
scientific_name
insect work metagenome
site
Badetz
site_ID
BAD
source material identifiers
5_055_R1S3
target gene
mtCOI
target subfragment
short barcoding region fwhF2+fwhR2N
trap_ID
5_055_R1S3