Fecal bacterial microbiota of mus musculus
feces metagenome
host
Mus musculus
isolation_source
feces
collection_date
2017-07-20
geo_loc_name
USA: Corvallis, Oregon
lat_lon
44.565296 N 123.276016 W
samp_mat_process
flash frozen in liquid nitrogen, maintained at -80 C until processing
group
Group 1
week
10
dose
50
infection_status
Yes
Mouse_ID
5684
Unique_Description
5684_gp1_50_wk10_yes
Male_Worms
1
Female_Worms
1
Total_paired_females
1
Total_worms
2
Weight_Necropsy
19.9
Date_Necropsy
2017-08-09T00:00:00
IFNy
0
IL10
13.38
IL17A
3.2
IL1
0
IL23
132.22
IL4
3.67
TNFalpha
0
MB_full
1
MB_moved
15
MBpartial50
11
MB_burried
12
OF_Day
1
OF_Arena
2
OF_Trial_Z1andZ2
8
OF_N_Ent_Z1
24
OF_Lat_T_Z1
0
OF_V_Mean_Z1
8.3
OF_Dist_Z1
2269.7
OF_Dpercentage_Z1
84
OF_P_Time_Z1
273.8
OF_PTpercentage_Z1
91.3
OF_N_Ent_Z2
24
OF_Lat_T_Z2
20.2
OF_V_Mean_Z2
16.5
OF_Dist_Z2
433
OF_Dpercentage_Z2
16
OF_P_Time_Z2
26.2
OF_PTpercentage_Z2
8.7
OF_N_Ent_TOTAL
48
OF_V_Mean_TOTAL
9
OF_Dist_TOTAL
2702.7
OF_P_Time_TOTAL
300
Corr_CD_Place_trial_E1
3648.61842
Corr_CD_Place_trial_E2
7201.91624
Corr_CD_Place_trial_E3
13598.6834
Corr_CD_Place_trial_E4
10016.8181
Corr_CD_Place_trial_E5
2266.3187
Corr_CD_Place_trial_E6
2449.23066
Corr_Avg_Prox_Probe_trials_PR0
29.8740316
Corr_Avg_Prox_Probe_trials_PR1
38.1235391
Corr_Avg_Prox_Probe_trials_PR2
40.6940311
Corr_Avg_Prox_Probe_trials_PR3
30.1781031
Place_Probe_trial_groups
G1.2
Testing_group_NO
1.7
NO_Arena
2
T4_Obj1
31
T4_Obj2
20
T4_TT
51
T5_Obj1
41
T5_Obj2
44
T5_TT
85
T6_Obj1
18
T6_Obj2
46
T6_TT
64
T4_DO
0.39215686
T5_DO
0.51764706
T6_DO
0.71875
T4_DI
-0.2156863
T5_DI
0.03529412
T6_DI
0.4375
concatenated_sample_ID
5684_gp1_50_wk10_yes
BioSampleModel
Metagenome or environmental