Fecal bacterial microbiota of mus musculus
feces metagenome
host
Mus musculus
isolation_source
feces
collection_date
2017-06-29
geo_loc_name
USA: Corvallis, Oregon
lat_lon
44.565296 N 123.276016 W
samp_mat_process
flash frozen in liquid nitrogen, maintained at -80 C until processing
group
Group 1
week
7
dose
75
infection_status
No
Mouse_ID
5660
Unique_Description
5660_gp1_75_wk7_no
Male_Worms
0
Female_Worms
0
Total_paired_females
0
Total_worms
0
Weight_Necropsy
NA
Date_Necropsy
2017-08-03T00:00:00
IFNy
0
IL10
0
IL17A
0
IL1
0
IL23
12.51
IL4
0
TNFalpha
1.02
MB_full
11
MB_moved
1
MBpartial50
13
MB_burried
13
OF_Day
1
OF_Arena
5
OF_Trial_Z1andZ2
4
OF_N_Ent_Z1
48
OF_Lat_T_Z1
0
OF_V_Mean_Z1
9.2
OF_Dist_Z1
2329.8
OF_Dpercentage_Z1
72.5
OF_P_Time_Z1
254.4
OF_PTpercentage_Z1
84.8
OF_N_Ent_Z2
49
OF_Lat_T_Z2
13
OF_V_Mean_Z2
19.3
OF_Dist_Z2
883.9
OF_Dpercentage_Z2
27.5
OF_P_Time_Z2
45.6
OF_PTpercentage_Z2
15.2
OF_N_Ent_TOTAL
97
OF_V_Mean_TOTAL
10.7
OF_Dist_TOTAL
3213.7
OF_P_Time_TOTAL
300
Corr_CD_Place_trial_E1
NA
Corr_CD_Place_trial_E2
NA
Corr_CD_Place_trial_E3
NA
Corr_CD_Place_trial_E4
NA
Corr_CD_Place_trial_E5
NA
Corr_CD_Place_trial_E6
NA
Corr_Avg_Prox_Probe_trials_PR0
NA
Corr_Avg_Prox_Probe_trials_PR1
NA
Corr_Avg_Prox_Probe_trials_PR2
NA
Corr_Avg_Prox_Probe_trials_PR3
NA
Place_Probe_trial_groups
NA
Testing_group_NO
1.3
NO_Arena
5
T4_Obj1
9
T4_Obj2
13
T4_TT
22
T5_Obj1
13
T5_Obj2
14
T5_TT
27
T6_Obj1
12
T6_Obj2
23
T6_TT
35
T4_DO
0.5909090909090909
T5_DO
0.5185185185185185
T6_DO
0.6571428571428571
T4_DI
0.18181818181818182
T5_DI
0.037037037037037035
T6_DI
0.3142857142857143
Comments
Exposed, but 0 worms after perfusion and no liver pathology, thus classified as uninfected.
concatenated_sample_ID
5660_gp1_75_wk7_no
BioSampleModel
Metagenome or environmental