Fecal bacterial microbiota of mus musculus
feces metagenome
host
Mus musculus
isolation_source
feces
collection_date
2017-07-20
geo_loc_name
USA: Corvallis, Oregon
lat_lon
44.565296 N 123.276016 W
samp_mat_process
flash frozen in liquid nitrogen, maintained at -80 C until processing
group
Group 1
week
10
dose
75
infection_status
Yes
Mouse_ID
5659
Unique_Description
5659_gp1_75_wk10_yes
Male_Worms
4
Female_Worms
4
Total_paired_females
4
Total_worms
8
Weight_Necropsy
NA
Date_Necropsy
2017-08-03T00:00:00
IFNy
NA
IL10
NA
IL17A
NA
IL1
NA
IL23
NA
IL4
NA
TNFalpha
NA
MB_full
1
MB_moved
14
MBpartial50
5
MB_burried
6
OF_Day
1
OF_Arena
4
OF_Trial_Z1andZ2
4
OF_N_Ent_Z1
50
OF_Lat_T_Z1
0
OF_V_Mean_Z1
8.3
OF_Dist_Z1
2030.2
OF_Dpercentage_Z1
73.8
OF_P_Time_Z1
245
OF_PTpercentage_Z1
81.7
OF_N_Ent_Z2
50
OF_Lat_T_Z2
0.8
OF_V_Mean_Z2
13.1
OF_Dist_Z2
722.3
OF_Dpercentage_Z2
26.2
OF_P_Time_Z2
55
OF_PTpercentage_Z2
18.3
OF_N_Ent_TOTAL
100
OF_V_Mean_TOTAL
9.2
OF_Dist_TOTAL
2752.5
OF_P_Time_TOTAL
300
Corr_CD_Place_trial_E1
11642.1437
Corr_CD_Place_trial_E2
12347.0619
Corr_CD_Place_trial_E3
4619.19975
Corr_CD_Place_trial_E4
2816.11679
Corr_CD_Place_trial_E5
3788.87573
Corr_CD_Place_trial_E6
2897.31104
Corr_Avg_Prox_Probe_trials_PR0
48.7375491
Corr_Avg_Prox_Probe_trials_PR1
43.8393157
Corr_Avg_Prox_Probe_trials_PR2
34.2971722
Corr_Avg_Prox_Probe_trials_PR3
26.4733566
Place_Probe_trial_groups
G1
Testing_group_NO
1.1
NO_Arena
3
T4_Obj1
20
T4_Obj2
26
T4_TT
46
T5_Obj1
17
T5_Obj2
18
T5_TT
35
T6_Obj1
30
T6_Obj2
27
T6_TT
57
T4_DO
0.56521739
T5_DO
0.51428571
T6_DO
0.47368421
T4_DI
0.13043478
T5_DI
0.02857143
T6_DI
-0.0526316
concatenated_sample_ID
5659_gp1_75_wk10_yes
BioSampleModel
Metagenome or environmental