Fecal bacterial microbiota of mus musculus
feces metagenome
host
Mus musculus
isolation_source
feces
collection_date
2017-06-29
geo_loc_name
USA: Corvallis, Oregon
lat_lon
44.565296 N 123.276016 W
samp_mat_process
flash frozen in liquid nitrogen, maintained at -80 C until processing
group
Group 1
week
7
dose
50
infection_status
Yes
Mouse_ID
5683
Unique_Description
5683_gp1_50_wk7_yes
Male_Worms
3
Female_Worms
2
Total_paired_females
2
Total_worms
5
Weight_Necropsy
20.3
Date_Necropsy
2017-08-09T00:00:00
IFNy
0
IL10
4.53
IL17A
3.5
IL1
4.63
IL23
24.67
IL4
3.34
TNFalpha
4.43
MB_full
0
MB_moved
15
MBpartial50
9
MB_burried
9
OF_Day
1
OF_Arena
1
OF_Trial_Z1andZ2
6
OF_N_Ent_Z1
38
OF_Lat_T_Z1
1
OF_V_Mean_Z1
6.7
OF_Dist_Z1
1661.9
OF_Dpercentage_Z1
72.2
OF_P_Time_Z1
246.4
OF_PTpercentage_Z1
82.1
OF_N_Ent_Z2
37
OF_Lat_T_Z2
0
OF_V_Mean_Z2
11.9
OF_Dist_Z2
638.8
OF_Dpercentage_Z2
27.8
OF_P_Time_Z2
53.6
OF_PTpercentage_Z2
17.9
OF_N_Ent_TOTAL
75
OF_V_Mean_TOTAL
7.7
OF_Dist_TOTAL
2300.7
OF_P_Time_TOTAL
300
Corr_CD_Place_trial_E1
6793.372739252534
Corr_CD_Place_trial_E2
5562.796566004906
Corr_CD_Place_trial_E3
3668.7950871481607
Corr_CD_Place_trial_E4
6779.40975313422
Corr_CD_Place_trial_E5
3163.599904167103
Corr_CD_Place_trial_E6
2939.339575006761
Corr_Avg_Prox_Probe_trials_PR0
42.405589941208
Corr_Avg_Prox_Probe_trials_PR1
54.891681880128544
Corr_Avg_Prox_Probe_trials_PR2
43.34444054989932
Corr_Avg_Prox_Probe_trials_PR3
27.037002448487616
Place_Probe_trial_groups
G1.2
Testing_group_NO
1.6
NO_Arena
1
T4_Obj1
35
T4_Obj2
31
T4_TT
66
T5_Obj1
23
T5_Obj2
39
T5_TT
62
T6_Obj1
NA
T6_Obj2
NA
T6_TT
NA
T4_DO
0.4696969696969697
T5_DO
0.6290322580645161
T6_DO
N/A
T4_DI
-0.06060606060606061
T5_DI
0.25806451612903225
T6_DI
NA
concatenated_sample_ID
5683_gp1_50_wk7_yes
BioSampleModel
Metagenome or environmental