Fecal bacterial microbiota of mus musculus
feces metagenome
host
Mus musculus
isolation_source
feces
collection_date
2017-07-06
geo_loc_name
USA: Corvallis, Oregon
lat_lon
44.565296 N 123.276016 W
samp_mat_process
flash frozen in liquid nitrogen, maintained at -80 C until processing
group
Group 2
week
7
dose
50
infection_status
Yes
Mouse_ID
756
Unique_Description
756_gp2_50_wk7_yes
Male_Worms
5
Female_Worms
3
Total_paired_females
3
Total_worms
8
Weight_Necropsy
19.7
Date_Necropsy
2017-08-10T00:00:00
IFNy
0
IL10
13.03
IL17A
4.58
IL1
0
IL23
98.88
IL4
2.67
TNFalpha
0.08
MB_full
0
MB_moved
11
MBpartial50
3
MB_burried
3
OF_Day
1
OF_Arena
5
OF_Trial_Z1andZ2
2
OF_N_Ent_Z1
22
OF_Lat_T_Z1
0
OF_V_Mean_Z1
5.7
OF_Dist_Z1
1586.9
OF_Dpercentage_Z1
83.5
OF_P_Time_Z1
278.4
OF_PTpercentage_Z1
92.8
OF_N_Ent_Z2
22
OF_Lat_T_Z2
11.4
OF_V_Mean_Z2
14.5
OF_Dist_Z2
312.6
OF_Dpercentage_Z2
16.5
OF_P_Time_Z2
21.6
OF_PTpercentage_Z2
7.2
OF_N_Ent_TOTAL
44
OF_V_Mean_TOTAL
6.3
OF_Dist_TOTAL
1899.5
OF_P_Time_TOTAL
300
Corr_CD_Place_trial_E1
12824.381568495986
Corr_CD_Place_trial_E2
6334.45103861977
Corr_CD_Place_trial_E3
5692.1415611542925
Corr_CD_Place_trial_E4
6078.951284183123
Corr_CD_Place_trial_E5
4048.4094563685303
Corr_CD_Place_trial_E6
2544.8612341399034
Corr_Avg_Prox_Probe_trials_PR0
44.79256406787386
Corr_Avg_Prox_Probe_trials_PR1
31.23868998437418
Corr_Avg_Prox_Probe_trials_PR2
29.4707190895722
Corr_Avg_Prox_Probe_trials_PR3
24.711832192257422
Place_Probe_trial_groups
G2
Testing_group_NO
2.2
NO_Arena
5
T4_Obj1
38
T4_Obj2
26
T4_TT
64
T5_Obj1
8
T5_Obj2
22
T5_TT
30
T6_Obj1
14
T6_Obj2
37
T6_TT
51
T4_DO
0.40625
T5_DO
0.7333333333333333
T6_DO
0.7254901960784313
T4_DI
-0.1875
T5_DI
0.4666666666666667
T6_DI
0.45098039215686275
concatenated_sample_ID
756_gp2_50_wk7_yes
BioSampleModel
Metagenome or environmental