Fecal bacterial microbiota of mus musculus
feces metagenome
host
Mus musculus
isolation_source
feces
collection_date
2017-06-29
geo_loc_name
USA: Corvallis, Oregon
lat_lon
44.565296 N 123.276016 W
samp_mat_process
flash frozen in liquid nitrogen, maintained at -80 C until processing
group
Group 1
week
7
dose
50
infection_status
Yes
Mouse_ID
5682
Unique_Description
5682_gp1_50_wk7_yes
Male_Worms
2
Female_Worms
0
Total_paired_females
1
Total_worms
2
Weight_Necropsy
22.4
Date_Necropsy
2017-08-09T00:00:00
IFNy
2.85
IL10
9.39
IL17A
16.24
IL1
0
IL23
188.43
IL4
4.83
TNFalpha
0
MB_full
4
MB_moved
15
MBpartial50
6
MB_burried
10
OF_Day
1
OF_Arena
6
OF_Trial_Z1andZ2
6
OF_N_Ent_Z1
24
OF_Lat_T_Z1
0
OF_V_Mean_Z1
3.8
OF_Dist_Z1
985.4
OF_Dpercentage_Z1
71.7
OF_P_Time_Z1
259.6
OF_PTpercentage_Z1
86.5
OF_N_Ent_Z2
24
OF_Lat_T_Z2
4
OF_V_Mean_Z2
9.6
OF_Dist_Z2
388.8
OF_Dpercentage_Z2
28.3
OF_P_Time_Z2
40.4
OF_PTpercentage_Z2
13.5
OF_N_Ent_TOTAL
48
OF_V_Mean_TOTAL
4.6
OF_Dist_TOTAL
1374.1
OF_P_Time_TOTAL
300
Corr_CD_Place_trial_E1
NA
Corr_CD_Place_trial_E2
NA
Corr_CD_Place_trial_E3
NA
Corr_CD_Place_trial_E4
NA
Corr_CD_Place_trial_E5
NA
Corr_CD_Place_trial_E6
NA
Corr_Avg_Prox_Probe_trials_PR0
NA
Corr_Avg_Prox_Probe_trials_PR1
NA
Corr_Avg_Prox_Probe_trials_PR2
NA
Corr_Avg_Prox_Probe_trials_PR3
NA
Place_Probe_trial_groups
NA
Testing_group_NO
1.5
NO_Arena
6
T4_Obj1
32
T4_Obj2
38
T4_TT
70
T5_Obj1
6
T5_Obj2
11
T5_TT
17
T6_Obj1
14
T6_Obj2
14
T6_TT
28
T4_DO
0.5428571428571428
T5_DO
0.6470588235294118
T6_DO
0.5
T4_DI
0.08571428571428572
T5_DI
0.29411764705882354
T6_DI
0
concatenated_sample_ID
5682_gp1_50_wk7_yes
BioSampleModel
Metagenome or environmental