EMOBON_Koster_VH1_Ha_210608_220608_(blank)
metagenome
INSDC center name
European Marine Biological Resource Centre
Submitter Id
EMOBON00731_COI
ampl_size
310
arms_unit_id
VH1A
broad-scale environmental context
Control
collection date
2022-06-08
crate_cover
Yes
deployment_date
2021-06-08
dna concentration
295
environmental medium
cotton swab [OBI:0002821]
geographic location (country and/or sea)
missing: control sample
geographic location (latitude)
missing: control sample
geographic location (locality)
missing: control sample
geographic location (longitude)
missing: control sample
geographic location (ocean)
missing: control sample
geographic location (region and locality)
missing: control sample
ha_id
Koster Ha
lib_layout
PAIRED
library reads sequenced
1611977
local environmental context
Negative
nucleic acid extraction
Quick-DNA Fecal/soil
obs_id
Koster
pcr primers
GGWACWGGWTGAACWGTWTAYCCYCC; TAIACYTCIGGRTGICCRAARAAYCA
pcr_blank_1
CEB_DFJ
pcr_blank_2
CEB_DFK
preservative
DESS
project name
EMOBON
quality_assessment
Pass
relevant standard operating procedures
Prod_ILL_BqADN_SuperLowCost_150_v3
replicate
blank_1
resequencing
No
samp_fraction
blank
samp_site
Vaderofjorden
sample collection device
autonomous reef monitoring structure [ENVO:01001855]
sample material processing
ARMS Handbook v3.0
sample name
EMOBON00731_COI
samples_alias_orig
EMOBON00731
sampling_event
Koster_VH1_Ha_210608_220608
scientific_name
metagenome
sequence_batch
Batch3.2
sequence_batch_rundate
Batch3.2_240409
sequence_quality_check
basic Genoscope QC
sequencing method
Illumina NovaSeq 6000
source material identifiers
EMOBON_Koster_Ha_13
source_mat_id_an
EMOBON_Koster_Ha_13_metabCOI
source_mat_id_orig
EMOBON_Koster_VH1_Ha_210608_220608_(blank)
status
blank
target gene
COI
total depth of water column
24