Fecal bacterial microbiota of mus musculus
feces metagenome
host
Mus musculus
isolation_source
feces
collection_date
2017-07-06
geo_loc_name
USA: Corvallis, Oregon
lat_lon
44.565296 N 123.276016 W
samp_mat_process
flash frozen in liquid nitrogen, maintained at -80 C until processing
group
Group 2
week
7
dose
75
infection_status
No
Mouse_ID
760
Unique_Description
760_gp2_75_wk7_no
Male_Worms
0
Female_Worms
0
Total_paired_females
0
Total_worms
0
Weight_Necropsy
NA
Date_Necropsy
2017-08-10T00:00:00
IFNy
4.29
IL10
8.17
IL17A
0
IL1
3.27
IL23
79.19
IL4
3.71
TNFalpha
5.04
MB_full
11
MB_moved
4
MBpartial50
15
MB_burried
15
OF_Day
1
OF_Arena
6
OF_Trial_Z1andZ2
6
OF_N_Ent_Z1
38
OF_Lat_T_Z1
0
OF_V_Mean_Z1
9.5
OF_Dist_Z1
2421.1
OF_Dpercentage_Z1
75.5
OF_P_Time_Z1
254.2
OF_PTpercentage_Z1
84.7
OF_N_Ent_Z2
38
OF_Lat_T_Z2
27
OF_V_Mean_Z2
17.1
OF_Dist_Z2
784.7
OF_Dpercentage_Z2
24.5
OF_P_Time_Z2
45.8
OF_PTpercentage_Z2
15.3
OF_N_Ent_TOTAL
76
OF_V_Mean_TOTAL
10.7
OF_Dist_TOTAL
3205.8
OF_P_Time_TOTAL
300
Corr_CD_Place_trial_E1
NA
Corr_CD_Place_trial_E2
NA
Corr_CD_Place_trial_E3
NA
Corr_CD_Place_trial_E4
NA
Corr_CD_Place_trial_E5
NA
Corr_CD_Place_trial_E6
NA
Corr_Avg_Prox_Probe_trials_PR0
NA
Corr_Avg_Prox_Probe_trials_PR1
NA
Corr_Avg_Prox_Probe_trials_PR2
NA
Corr_Avg_Prox_Probe_trials_PR3
NA
Place_Probe_trial_groups
NA
Testing_group_NO
2.2
NO_Arena
6
T4_Obj1
37
T4_Obj2
29
T4_TT
66
T5_Obj1
24
T5_Obj2
32
T5_TT
56
T6_Obj1
10
T6_Obj2
25
T6_TT
35
T4_DO
0.4393939393939394
T5_DO
0.5714285714285714
T6_DO
0.7142857142857143
T4_DI
-0.12121212121212122
T5_DI
0.14285714285714285
T6_DI
0.42857142857142855
Comments
Exposed, but 0 worms after perfusion and no liver pathology, thus classified as uninfected.
concatenated_sample_ID
760_gp2_75_wk7_no
BioSampleModel
Metagenome or environmental