NR_1 - 29/12/21_MF500_rep1
metagenome
ENA first public
2026-04-27
INSDC center name
European Marine Biological Resource Centre
INSDC status
public
Submitter Id
EMOBON00565_COI
ampl_size
310
arms_unit_id
NR1
broad-scale environmental context
marine benthic biome [ENVO_01000024], marine coral reef biome [ENVO:01000049]
collection date
2021-12-29
crate_cover
No
deployment_date
2020-12-27
depth
10
dna concentration
2.65
environmental medium
biomass derived from sieving motile communities present in the retrieval tub of an autonomous reef monitoring structure through a 500 micrometre mesh [ENVO:01001901]
geographic location (country and/or sea)
Israel
geographic location (latitude)
29.50555
geographic location (locality)
Israeli part of the Gulf of Aqaba
geographic location (longitude)
34.920278
geographic location (ocean)
Red Sea
geographic location (region and locality)
Gulf of Aqaba
ha_id
IUIEilat Ha
lib_layout
PAIRED
library reads sequenced
2186436
local environmental context
coral reef [ENVO:00000150]
nucleic acid extraction
Quick-DNA Fecal/soil
obs_id
IUIEilat1
pcr primers
GGWACWGGWTGAACWGTWTAYCCYCC; TAIACYTCIGGRTGICCRAARAAYCA
pcr_blank_1
CEB_DET
pcr_blank_2
CEB_DEU
preservative
DESS
project name
EMOBON
quality_assessment
Pass
relevant standard operating procedures
Prod_ILL_BqADN_SuperLowCost_150_v3
replicate
1
resequencing
No
samp_fraction
MF
samp_site
NR
sample collection device
autonomous reef monitoring structure [ENVO:01001855]
sample material processing
ARMS Handbook v3.0
sample name
EMOBON00565_COI
samples_alias_orig
EMOBON00565
sampling_event
IUIEIlat_NR1_Ha_201227_211229
scientific_name
metagenome
sequence_batch
Batch3.2
sequence_batch_rundate
Batch3.2_240313
sequence_quality_check
basic Genoscope QC
sequencing method
Illumina NovaSeq 6000
size_filter
500
source material identifiers
EMOBON_IUIEilat_Ha_5
source_mat_id_an
EMOBON_IUIEilat_Ha_5_metabCOI
source_mat_id_orig
NR_1 - 29/12/21_MF500_rep1
status
sample
target gene
COI
total depth of water column
10