Metagenome-Assembled Genome spire_mag_01263976 in SPIRE v01 classified as Eubacterium_N saphenum
[Eubacterium] saphenum
assembly software
megahit 1.2.9
GUNC version
GUNC v1.0.6
broad-scale environmental context
missing: third party data
collection date
missing: third party data
number of contigs
68
sample derived from
SAMEA2738003
geographic location (longitude)
missing: third party data
binning parameters
tetramer and coverage
contamination score
0.01
GUNC clade separation score
0.0
taxonomic classification
d__Bacteria;p__Bacillota_A;c__Clostridia;o__Peptostreptococcales;f__Anaerovoracaceae;g__Eubacterium_N;s__Eubacterium_N saphenum
linked to SPIRE study
https://spire.embl.de/spire/v1/study/743
completeness software
CheckM2 v0.1.3
contig N50
18101
linked to SPIRE sample
https://spire.embl.de/spire/v1/sample/113442
SPIRE genome cluster
https://spire.embl.de/spire/v1/cluster/spire_v1_095_000177562
geographic location (country and/or sea)
missing: third party data
binning software
metaBAT2 v2.12.1
linked to analysis project
ERP174775
organism
[Eubacterium] saphenum
assembly quality
Many fragments with little to no review of assembly other than reporting of standard assembly statistics
GUNC reference representation score
0.96
taxonomic identity marker
multi-marker approach
completeness score
88.80
environmental medium
missing: third party data
geographic location (latitude)
missing: third party data
scientific_name
[Eubacterium] saphenum
taxonomic classification software
GTDBtk v2.3.2_r214
SPIRE genome id
https://spire.embl.de/spire/v1/genome/spire_mag_01263976
GUNC contamination score
0.0
local environmental context
missing: third party data
MAG coverage software
bwa mem
metagenomic source
metagenomes
project name
SPIRE v1: a Searchable Planetary-scale mIcrobiome REsource
derived from assembly
ERZ27262881
isolation_source
missing: third party data