Fecal bacterial microbiota of mus musculus
feces metagenome
host
Mus musculus
isolation_source
feces
collection_date
2017-06-29
geo_loc_name
USA: Corvallis, Oregon
lat_lon
44.565296 N 123.276016 W
samp_mat_process
flash frozen in liquid nitrogen, maintained at -80 C until processing
group
Group 1
week
7
dose
50
infection_status
Yes
Mouse_ID
5655
Unique_Description
5655_gp1_50_wk7_yes
Male_Worms
10
Female_Worms
4
Total_paired_females
4
Total_worms
14
Weight_Necropsy
22.25
Date_Necropsy
2017-08-04T00:00:00
IFNy
0
IL10
21.83
IL17A
7.12
IL1
0
IL23
23.91
IL4
1.93
TNFalpha
0
MB_full
1
MB_moved
15
MBpartial50
8
MB_burried
9
OF_Day
1
OF_Arena
3
OF_Trial_Z1andZ2
3
OF_N_Ent_Z1
28
OF_Lat_T_Z1
0
OF_V_Mean_Z1
7.2
OF_Dist_Z1
1841.6
OF_Dpercentage_Z1
79.7
OF_P_Time_Z1
256.6
OF_PTpercentage_Z1
85.5
OF_N_Ent_Z2
28
OF_Lat_T_Z2
14.2
OF_V_Mean_Z2
10.8
OF_Dist_Z2
468.2
OF_Dpercentage_Z2
20.3
OF_P_Time_Z2
43.4
OF_PTpercentage_Z2
14.5
OF_N_Ent_TOTAL
56
OF_V_Mean_TOTAL
7.7
OF_Dist_TOTAL
2309.7
OF_P_Time_TOTAL
300
Corr_CD_Place_trial_E1
12679.796459154046
Corr_CD_Place_trial_E2
8318.6041297787
Corr_CD_Place_trial_E3
10101.655912850507
Corr_CD_Place_trial_E4
3212.625254341951
Corr_CD_Place_trial_E5
4224.991978047568
Corr_CD_Place_trial_E6
1109.2570349447476
Corr_Avg_Prox_Probe_trials_PR0
42.3844550046986
Corr_Avg_Prox_Probe_trials_PR1
47.42492441386294
Corr_Avg_Prox_Probe_trials_PR2
32.756222267397895
Corr_Avg_Prox_Probe_trials_PR3
37.818228805773266
Place_Probe_trial_groups
G1
Testing_group_NO
1.2
NO_Arena
3
T4_Obj1
44
T4_Obj2
41
T4_TT
85
T5_Obj1
35
T5_Obj2
16
T5_TT
51
T6_Obj1
34
T6_Obj2
26
T6_TT
60
T4_DO
0.4823529411764706
T5_DO
0.3137254901960784
T6_DO
0.43333333333333335
T4_DI
-0.03529411764705882
T5_DI
-0.37254901960784315
T6_DI
-0.13333333333333333
concatenated_sample_ID
5655_gp1_50_wk7_yes
BioSampleModel
Metagenome or environmental