Fecal bacterial microbiota of mus musculus
feces metagenome
host
Mus musculus
isolation_source
feces
collection_date
2017-07-20
geo_loc_name
USA: Corvallis, Oregon
lat_lon
44.565296 N 123.276016 W
samp_mat_process
flash frozen in liquid nitrogen, maintained at -80 C until processing
group
Group 1
week
10
dose
50
infection_status
Yes
Mouse_ID
5656
Unique_Description
5656_gp1_50_wk10_yes
Male_Worms
6
Female_Worms
3
Total_paired_females
3
Total_worms
9
Weight_Necropsy
20
Date_Necropsy
2017-08-04T00:00:00
IFNy
6.89
IL10
563.25
IL17A
70.73
IL1
30.86
IL23
2405.74
IL4
0.58
TNFalpha
7.44
MB_full
4
MB_moved
14
MBpartial50
5
MB_burried
9
OF_Day
1
OF_Arena
4
OF_Trial_Z1andZ2
5
OF_N_Ent_Z1
39
OF_Lat_T_Z1
0
OF_V_Mean_Z1
9.6
OF_Dist_Z1
2525.6
OF_Dpercentage_Z1
79.2
OF_P_Time_Z1
262.6
OF_PTpercentage_Z1
87.5
OF_N_Ent_Z2
39
OF_Lat_T_Z2
15
OF_V_Mean_Z2
17.7
OF_Dist_Z2
663.3
OF_Dpercentage_Z2
20.8
OF_P_Time_Z2
37.4
OF_PTpercentage_Z2
12.5
OF_N_Ent_TOTAL
78
OF_V_Mean_TOTAL
10.6
OF_Dist_TOTAL
3189
OF_P_Time_TOTAL
300
Corr_CD_Place_trial_E1
11188.8725
Corr_CD_Place_trial_E2
7964.99628
Corr_CD_Place_trial_E3
7847.16542
Corr_CD_Place_trial_E4
9956.53053
Corr_CD_Place_trial_E5
3131.6207
Corr_CD_Place_trial_E6
3282.7902
Corr_Avg_Prox_Probe_trials_PR0
46.7720655
Corr_Avg_Prox_Probe_trials_PR1
52.6841701
Corr_Avg_Prox_Probe_trials_PR2
49.4649297
Corr_Avg_Prox_Probe_trials_PR3
35.3452637
Place_Probe_trial_groups
G1
Testing_group_NO
1.3
NO_Arena
4
T4_Obj1
10
T4_Obj2
12
T4_TT
22
T5_Obj1
5
T5_Obj2
23
T5_TT
28
T6_Obj1
8
T6_Obj2
26
T6_TT
34
T4_DO
0.54545455
T5_DO
0.82142857
T6_DO
0.76470588
T4_DI
0.09090909
T5_DI
0.64285714
T6_DI
0.52941176
concatenated_sample_ID
5656_gp1_50_wk10_yes
BioSampleModel
Metagenome or environmental