Fecal bacterial microbiota of mus musculus
feces metagenome
host
Mus musculus
isolation_source
feces
collection_date
2017-07-06
geo_loc_name
USA: Corvallis, Oregon
lat_lon
44.565296 N 123.276016 W
samp_mat_process
flash frozen in liquid nitrogen, maintained at -80 C until processing
group
Group 2
week
7
dose
75
infection_status
Yes
Mouse_ID
785
Unique_Description
785_gp2_75_wk7_yes
Male_Worms
12
Female_Worms
9
Total_paired_females
9
Total_worms
21
Weight_Necropsy
21
Date_Necropsy
2017-08-15T00:00:00
IFNy
0.52
IL10
27.39
IL17A
23.67
IL1
24.54
IL23
495.65
IL4
7.94
TNFalpha
3.3
MB_full
0
MB_moved
7
MBpartial50
1
MB_burried
1
OF_Day
1
OF_Arena
5
OF_Trial_Z1andZ2
7
OF_N_Ent_Z1
34
OF_Lat_T_Z1
0
OF_V_Mean_Z1
6.7
OF_Dist_Z1
1711.2
OF_Dpercentage_Z1
75.2
OF_P_Time_Z1
257
OF_PTpercentage_Z1
85.7
OF_N_Ent_Z2
34
OF_Lat_T_Z2
3
OF_V_Mean_Z2
13.2
OF_Dist_Z2
565.8
OF_Dpercentage_Z2
24.8
OF_P_Time_Z2
43
OF_PTpercentage_Z2
14.3
OF_N_Ent_TOTAL
68
OF_V_Mean_TOTAL
7.6
OF_Dist_TOTAL
2277
OF_P_Time_TOTAL
300
Corr_CD_Place_trial_E1
11175.892357911172
Corr_CD_Place_trial_E2
5615.486652228734
Corr_CD_Place_trial_E3
4984.093429152175
Corr_CD_Place_trial_E4
5873.751107954731
Corr_CD_Place_trial_E5
9232.4092582867
Corr_CD_Place_trial_E6
5226.921353020413
Corr_Avg_Prox_Probe_trials_PR0
44.135875663717584
Corr_Avg_Prox_Probe_trials_PR1
26.50871334773169
Corr_Avg_Prox_Probe_trials_PR2
32.307767944308274
Corr_Avg_Prox_Probe_trials_PR3
46.60826091788637
Place_Probe_trial_groups
G2
Testing_group_NO
2.7
NO_Arena
5
T4_Obj1
34
T4_Obj2
23
T4_TT
57
T5_Obj1
29
T5_Obj2
28
T5_TT
57
T6_Obj1
15
T6_Obj2
35
T6_TT
50
T4_DO
0.40350877192982454
T5_DO
0.49122807017543857
T6_DO
0.7
T4_DI
-0.19298245614035087
T5_DI
-0.017543859649122806
T6_DI
0.4
concatenated_sample_ID
785_gp2_75_wk7_yes
BioSampleModel
Metagenome or environmental