Friedeburgerhuette 7_082_R4S1 rbcL metabarcoding
insect work metagenome
ENA first public
2025-08-01
INSDC center name
Thuenen-Institute of Biodiversity
INSDC status
public
Marker
rbcL.sh
PrimerSeq_FWD_1
GCTATGCGCGAGCtgcCGAAATCGGTAGACGCTACG
PrimerSeq_FWD_2
NA
PrimerSeq_REV_1
GCGAGCTGCGCTAtgcCCATTGAGTCTCTGCACCTATC
PrimerSeq_REV_2
NA
SampleID_ASV
F-HEAD-23-R-TAIL-3
SampleName
082
Submitter Id
F-HEAD-23-R-TAIL-3.rbcL_sh
TagFWD
TCAACCT
TagREV
GTCGCCA
adapters
FWD: TCAACCT REV: GTCGCCA
broad-scale environmental context
ENVO:01000245
collection date
2020-10-08
environmental medium
ENVO:02000004
geographic location (country and/or sea)
Germany
geographic location (latitude)
51.61895603
geographic location (longitude)
11.67380700
lat
51.61895603206215
local environmental context
nest tube of cavity-nesting hymenoptera
lon
11.673807002235499
multiplex identifiers
FWD: TCAACCT REV: GTCGCCA
nucleic acid amplification
PCR
nucleic acid extraction
Machery-Nagel NucleoSpin 96 Soil Kit
pcr primers
FWD: GCTATGCGCGAGCtgcCGAAATCGGTAGACGCTACG REV: GCGAGCTGCGCTAtgcCCATTGAGTCTCTGCACCTATC
project name
PilotNA
removal_date
2020-10-08
sample name
F-HEAD-23-R-TAIL-3.rbcL_sh
scientific_name
insect work metagenome
site
Friedeburgerhuette
site_ID
FR
source material identifiers
7_082_R4S1
target gene
rbcL
target subfragment
metabarcoding region
trap_ID
7_082_R4S1