Fecal bacterial microbiota of mus musculus
feces metagenome
host
Mus musculus
isolation_source
feces
collection_date
2017-06-29
geo_loc_name
USA: Corvallis, Oregon
lat_lon
44.565296 N 123.276016 W
samp_mat_process
flash frozen in liquid nitrogen, maintained at -80 C until processing
group
Group 1
week
7
dose
50
infection_status
Yes
Mouse_ID
708
Unique_Description
708_gp1_50_wk7_yes
Male_Worms
13
Female_Worms
6
Total_paired_females
6
Total_worms
19
Weight_Necropsy
22.1
Date_Necropsy
2017-08-04T00:00:00
IFNy
4.19
IL10
58.09
IL17A
2.74
IL1
0
IL23
175.89
IL4
3.02
TNFalpha
0
MB_full
0
MB_moved
8
MBpartial50
3
MB_burried
3
OF_Day
1
OF_Arena
2
OF_Trial_Z1andZ2
1
OF_N_Ent_Z1
21
OF_Lat_T_Z1
0
OF_V_Mean_Z1
6.1
OF_Dist_Z1
1597.5
OF_Dpercentage_Z1
82.5
OF_P_Time_Z1
262.6
OF_PTpercentage_Z1
87.5
OF_N_Ent_Z2
21
OF_Lat_T_Z2
18.6
OF_V_Mean_Z2
9.1
OF_Dist_Z2
339.5
OF_Dpercentage_Z2
17.5
OF_P_Time_Z2
37.4
OF_PTpercentage_Z2
12.5
OF_N_Ent_TOTAL
42
OF_V_Mean_TOTAL
6.5
OF_Dist_TOTAL
1937.1
OF_P_Time_TOTAL
300
Corr_CD_Place_trial_E1
12037.661221916314
Corr_CD_Place_trial_E2
5490.601607130445
Corr_CD_Place_trial_E3
11492.350452778308
Corr_CD_Place_trial_E4
5359.165987631745
Corr_CD_Place_trial_E5
8503.593256243103
Corr_CD_Place_trial_E6
2891.2089241476415
Corr_Avg_Prox_Probe_trials_PR0
59.969616253963345
Corr_Avg_Prox_Probe_trials_PR1
46.61726522949806
Corr_Avg_Prox_Probe_trials_PR2
44.421760885328176
Corr_Avg_Prox_Probe_trials_PR3
38.80552435972061
Place_Probe_trial_groups
G1
Testing_group_NO
1.1
NO_Arena
2
T4_Obj1
5
T4_Obj2
4
T4_TT
9
T5_Obj1
29
T5_Obj2
41
T5_TT
70
T6_Obj1
34
T6_Obj2
40
T6_TT
74
T4_DO
0.4444444444444444
T5_DO
0.5857142857142857
T6_DO
0.5405405405405406
T4_DI
-0.1111111111111111
T5_DI
0.17142857142857143
T6_DI
0.08108108108108109
concatenated_sample_ID
708_gp1_50_wk7_yes
BioSampleModel
Metagenome or environmental