Jemmeritz 1_002_R3S2 mtCOI long metabarcoding
insect work metagenome
ENA first public
2025-08-01
INSDC center name
Thuenen-Institute of Biodiversity
INSDC status
public
Marker
COI.lg
PrimerSeq_FWD_1
GCTATGCGCGAGCtgcGGDACWGGWTGAACWGTWTAYCCHCC
PrimerSeq_FWD_2
NA
PrimerSeq_REV_1
GCGAGCTGCGCTAtgcTAAACTTCAGGGTGACCAAAAAATCA
PrimerSeq_REV_2
NA
SampleID_ASV
F-HEAD-7-R-TAIL-13
SampleName
002
Submitter Id
F-HEAD-7-R-TAIL-13.COI_lg
TagFWD
CCAGATA
TagREV
AGCTCGC
adapters
FWD: CCAGATA REV: AGCTCGC
broad-scale environmental context
ENVO:01000245
collection date
2020-10-09
environmental medium
ENVO:02000004
geographic location (country and/or sea)
Germany
geographic location (latitude)
52.64621459
geographic location (longitude)
11.23375672
lat
52.64621459463341
local environmental context
nest tube of cavity-nesting hymenoptera
lon
11.233756722583914
multiplex identifiers
FWD: CCAGATA REV: AGCTCGC
nucleic acid amplification
PCR
nucleic acid extraction
Machery-Nagel NucleoSpin 96 Soil Kit
pcr primers
FWD: GCTATGCGCGAGCtgcGGDACWGGWTGAACWGTWTAYCCHCC REV: GCGAGCTGCGCTAtgcTAAACTTCAGGGTGACCAAAAAATCA
project name
PilotNA
removal_date
2020-10-09
sample name
F-HEAD-7-R-TAIL-13.COI_lg
scientific_name
insect work metagenome
site
Jemmeritz
site_ID
JE
source material identifiers
1_002_R3S2
target gene
mtCOI
target subfragment
long barcoding region
trap_ID
1_002_R3S2