6e8d2c7b-1930-4cfb-8e5e-e98baa43badb-asg-MAGScoT_cleanbin_000002
Mucilaginibacter sp.
16S recovery software
PROKKA (version 1.14.6)
16s recovered
Yes
ENA first public
2025-02-27
GAL
Geomar Helmholtz Centre
GAL_sample_id
NOT PROVIDED
INSDC center name
Tree of Life Programme
INSDC status
public
MAG coverage software
Minimap2 (version 2.24-r1122)
Submitter Id
6e8d2c7b-1930-4cfb-8e5e-e98baa43badb
assembly quality
Single contiguous sequence without gaps or ambiguities with a consensus error rate equivalent to Q50 or better
assembly software
metaMDBG (version 0.3)
binning parameters
coverage; graph
binning software
MAGScoT (version 1.0.0); MetaBat (version 2.15); MaxBin (version 2.2.7)
broad-scale environmental context
aquatic biome
collected_by
SALLY LEYS
collecting institution
University of Alberta
collection date
2023-07-24
common name
Mueller's freshwater sponge
completeness score
97.62
completeness software
checkM (version 1.2.2); checkM_DB (release 2015-01-16)
contamination score
0.0
environmental medium
adult sponge tissue
geographic location (country and/or sea)
Canada
geographic location (latitude)
53.53
geographic location (longitude)
-113.53
geographic location (region and locality)
ALBERTA | UNIVERSITY OF ALBERTA | CCIS5-090
habitat
STERILE CULTURE OF STREKALS MEDIUM IN THE LAB
host life stage
juvenile
host scientific name
Ephydatia muelleri
host sex
not collected
host taxid
6052
identified_by
SALLY LEYS
identifier_affiliation
University of Alberta
investigation type
metagenome-assembled genome
isolation_source
Sponge: Ephydatia muelleri
local environmental context
freshwater biome
metagenomic source
sponge metagenome
number of standard tRNAs extracted
37
organism part
WHOLE ORGANISM
project name
ASG
sample derived from
SAMEA117780420
sample name
6e8d2c7b-1930-4cfb-8e5e-e98baa43badb
scientific_name
Mucilaginibacter sp.
sequencing method
Pacbio Sequel II
specimen_id
GHC0000277
specimen_voucher
NOT PROVIDED
symbiont
N
tRNA extraction software
PROKKA (version 1.14.6)
taxonomic classification
GTDB-TK (version 2.4.0); GTDB (release 214)
taxonomic identity marker
taxonomic classification fully defined by topology
tolid
odEphMuel1.Mucilaginibacter_sp_1