Salmon gut content from F068
fish gut metagenome
shotgun metagenomics of salmon gut content
ENA first public
2025-10-30
External Id
SAMEA114528637
INSDC center name
UPPSALA UNIVERSITY
INSDC last update
2023-11-01T10:37:06Z
INSDC status
public
Submitter Id
F068_MetaG
adapters
Illumina:AGATCGGAAGAGCACACGTCTGAACTCCAGTCAC;AGATCGGAAGAGCGTCGTGTAGGGAAAGAGTGTA
broad-scale environmental context
animal-associated environment
collection date
2018-04-09
environmental medium
gut content
geographic location (country and/or sea)
Norway
geographic location (latitude)
60.49969
geographic location (longitude)
4.92814
host body site
gut content
host common name
Atlantic salmon
host diet
Feed1
host disease status
index 2: moderate cestode load
host length
53
host phenotype
Size class: Small
host scientific name
Salmo salar
host subject id
F068
host taxid
8030
host total mass
1540
local environmental context
gastrointestinal tract
negative control type
1X Shield buffer Zymo Research
project name
HoloFish
sample name
F068_MetaG
scientific_name
fish gut metagenome
sequencing method
Illumina