8c9a6700-f045-4f67-973d-99a5b8b15ec5-asg-MAGScoT_cleanbin_000035
Candidatus Foliamicus sp.
16S recovery software
PROKKA (version 1.14.6)
16s recovered
Yes
ENA first public
2025-02-27
GAL
Geomar Helmholtz Centre
GAL_sample_id
NOT PROVIDED
INSDC center name
Tree of Life Programme
INSDC status
public
MAG coverage software
Minimap2 (version 2.24-r1122)
Submitter Id
8c9a6700-f045-4f67-973d-99a5b8b15ec5
assembly quality
Single contiguous sequence without gaps or ambiguities with a consensus error rate equivalent to Q50 or better
assembly software
metaMDBG (version 0.3)
binning parameters
coverage; graph
binning software
MAGScoT (version 1.0.0); MetaBat (version 2.15); MaxBin (version 2.2.7)
broad-scale environmental context
aquatic biome
collected_by
Lennart Melson
collecting institution
GEOMAR
collection date
2024-02-21
completeness score
78.24
completeness software
checkM (version 1.2.2); checkM_DB (release 2015-01-16)
contamination score
1.76
depth
1
environmental medium
adult sponge tissue
geographic location (country and/or sea)
Germany
geographic location (latitude)
54.19
geographic location (longitude)
10.09
geographic location (region and locality)
Kiel | GEOMAR
habitat
aquarium
host life stage
adult
host scientific name
Haliclona cnidata
host sex
not applicable
host taxid
2488703
identified_by
Lennart Melson
identifier_affiliation
GEOMAR
investigation type
metagenome-assembled genome
isolation_source
Sponge: Haliclona cnidata
local environmental context
marine biome
metagenomic source
sponge metagenome
number of standard tRNAs extracted
46
organism part
WHOLE ORGANISM
project name
ToL
relationship
unknown
sample derived from
SAMEA117781122
sample name
8c9a6700-f045-4f67-973d-99a5b8b15ec5
scientific_name
Candidatus Foliamicus sp.
sequencing method
Pacbio Sequel II
specimen_id
GHC0000320
specimen_voucher
NOT PROVIDED
symbiont
N
tRNA extraction software
PROKKA (version 1.14.6)
taxonomic classification
GTDB-TK (version 2.4.0); GTDB (release 214)
taxonomic identity marker
taxonomic classification fully defined by topology
tolid
odHalCnid1.Foliamicus_sp_2