Tree bark microbiota from sampleTOV_23_058
tree metagenome
metabarcoding of DNA from birch bark microbiota
plant body site
bark
source material identifiers
TreeID:1203
broad-scale environmental context
broadleaf forest
host scientific name
Betula
collection date
2022-06-03
target gene
16S;ITS2
host diameter at breast height
14.97648014
geographic location (longitude)
8.84517900
host common name
birch
taxonomic classification
NA
nucleic acid extraction
KingFisher Tissue kit, ThermoFisher Scientific
experimental factor
NA
geographic location (country and/or sea)
Norway
organism
tree metagenome
host taxid
3504
environmental medium
tree bark
geographic location (latitude)
58.95447791
scientific_name
tree metagenome
sample collection method
swab of bark surface
target subfragment
16Sv4;ITS2
geographic location (region and locality)
Solhomfjell plot So7
pcr primers
16S-515F:GTGYCAGCMGCCGCGGTAA;16S-806R:GGACTACNVGGGTWTCTAAT;ITS-Cha3:CAACTCTCRRCAACGGATA;ITS-u4:RGTTTCTTTTCCTCCGCTTA
local environmental context
plant-associated environment
project name
Birch tree bark microbiota
sampling height
175
project accession
PRJEB109031
sampling aspect on trunk
120