2c1f88c0-0192-4de5-8781-62224f13a718-asg-MAGScoT_cleanbin_000111
Alphaproteobacteria bacterium
16S recovery software
PROKKA (version 1.14.6)
16s recovered
Yes
ENA first public
2025-02-27
GAL
Geomar Helmholtz Centre
GAL_sample_id
NOT PROVIDED
INSDC center name
Tree of Life Programme
INSDC status
public
MAG coverage software
Minimap2 (version 2.24-r1122)
Submitter Id
2c1f88c0-0192-4de5-8781-62224f13a718
assembly quality
Single contiguous sequence without gaps or ambiguities with a consensus error rate equivalent to Q50 or better
assembly software
metaMDBG (version 0.3)
binning parameters
coverage; graph
binning software
MAGScoT (version 1.0.0); MetaBat (version 2.15); MaxBin (version 2.2.7)
broad-scale environmental context
aquatic biome
collected_by
NICOLE WEBSTER
collecting institution
AIMS
collection date
2020-09-23
completeness score
91.8
completeness software
checkM (version 1.2.2); checkM_DB (release 2015-01-16)
contamination score
3.9
depth
12.0
environmental medium
adult sponge tissue
geographic location (country and/or sea)
Australia
geographic location (latitude)
18.91
geographic location (longitude)
147.70
geographic location (region and locality)
Queensland | Great Barrier Reef | Davies Reef
habitat
Reef
host life stage
adult
host scientific name
Ircinia ramosa
host sex
not collected
host taxid
281041
identified_by
NICOLE WEBSTER
identifier_affiliation
AIMS
investigation type
metagenome-assembled genome
isolation_source
Sponge: Ircinia ramosa
local environmental context
marine biome
metagenomic source
sponge metagenome
number of standard tRNAs extracted
59
organism part
WHOLE ORGANISM
project name
ASG
sample derived from
SAMEA117781306
sample name
2c1f88c0-0192-4de5-8781-62224f13a718
scientific_name
Alphaproteobacteria bacterium
sequencing method
Pacbio Sequel II
specimen_id
GHC0000114
specimen_voucher
NOT PROVIDED
tRNA extraction software
PROKKA (version 1.14.6)
taxonomic classification
GTDB-TK (version 2.4.0); GTDB (release 214)
taxonomic identity marker
ani_screen
tolid
odIrcRamo1.Alphaproteobacteria_4