RoCSI_37
marine metagenome
RoCSI bihourly temporal sample (autonmously)
ENA first public
2025-10-30
INSDC center name
National Oceanography Centre
INSDC status
public
Submitter Id
ena-SAMPLE-TAB-09-12-2024-16:19:12:802-5666
broad-scale environmental context
aquatic biome ENVO_00002030
collection date
2019-11-13
depth
1
environmental medium
liquid water ENVO_00002006
experimental factor
time series design EFO_0001806
geographic location (country and/or sea)
Atlantic Ocean
geographic location (latitude)
50.891513
geographic location (longitude)
-1.394115
geographic location (region and locality)
United Kingdom
local environmental context
estuarine biome ENVO_01000020
nucleic acid extraction
Modified Qiagen AllPrep DNA/RNA Mini Kit
project name
RoCSI_Soton_Temporal
sample collection device
Robotic Cartridge Sampling Instrument (RoCSI)
sample collection method
Autonomous filtration through 0.22µm Sterivex and autonomous preservation with RLT+ buffer Qiagen. Removed from the RoCSI device and stored in -80°C freezer within 24 hours of collection.
sample name
ena-SAMPLE-TAB-09-12-2024-16:19:12:802-5666
sample storage location
National Oceanography Centre, Southampton, UK
sample storage temperature
-80
sample volume or weight for DNA extraction
500
scientific_name
marine metagenome
size-fraction lower threshold
0.00022
target gene
16S rRNA|18S rRNA
target subfragment
16S V4-V5 |18S V9
temperature
10.6347867
total depth of water column
2.4976