PELAGICS-MAG-m2-bin128680-ZLE-07aug18
Luteolibacter sp.
PELAGICS-MAG-m2-bin128680-ZLE-07aug18: from Žlutice reservoir
ENA first public
2026-01-14
INSDC center name
BIOLOGY CENTRE ASCR, V.V.I., INSTITUTE OF HYDROBIO
INSDC status
public
Submitter Id
PELAGICS-MAG-m2-bin128680-ZLE-07aug18.
assembly quality
Multiple fragments where gaps span repetitive regions. Presence of the 23S, 16S, and 5S rRNA genes and at least 18 tRNAs
assembly software
MEGAHIT
binning parameters
coverage and kmer
binning software
MetaBAT, MetaBAT2, MaxBin2
broad-scale environmental context
freshwater ecosystem
collection date
2018-08-07
completeness score
45.03
completeness software
CheckM
contamination score
0.34
environmental medium
reservoir
geographic location (country and/or sea)
Czechia
geographic location (latitude)
50.09
geographic location (longitude)
13.13
isolation_source
Žlutice reservoir
local environmental context
freshwater lake
metagenomic source
freshwater metagenome
project name
PRJNA429141
sample derived from
ERS16387278
sample name
PELAGICS-MAG-m2-bin128680-ZLE-07aug18.
scientific_name
Luteolibacter sp.
taxonomic identity marker
multi-marker approach