66f246a6-818b-4ab1-82cb-55c194f54abb-asg-MAGScoT_cleanbin_000042
uncultured Pseudohongiella sp.
16S recovered
Yes
16S recovery software
PROKKA (version 1.14.6)
ENA first public
2025-04-17
GAL
Geomar Helmholtz Centre
GAL_sample_id
NOT PROVIDED
INSDC center name
Tree of Life Programme
INSDC status
public
MAG coverage software
Minimap2 (version 2.24-r1122)
Submitter Id
66f246a6-818b-4ab1-82cb-55c194f54abb
assembly quality
Many fragments with little to no review of assembly other than reporting of standard assembly statistics
assembly software
metaMDBG (version 0.3)
binning parameters
coverage; graph
binning software
MAGScoT (version 1.0.0); MetaBat (version 2.15); MaxBin (version 2.2.7)
broad-scale environmental context
aquatic biome
collected_by
Andia Chaves Fonnegra
collecting institution
FLORIDA ATLANTIC UNIVERSITY
collection date
2024-02-01
common name
row pore rope sponge
completeness score
71.0
completeness software
checkM (version 1.2.2); checkM_DB (release 2015-01-16)
contamination score
1.54
depth
18.6
environmental medium
adult sponge tissue
geographic location (country and/or sea)
USA
geographic location (latitude)
26.16
geographic location (longitude)
-80.08
geographic location (region and locality)
Florida | Fort Lauderdale | BC3
habitat
coral reef
host life stage
adult
host scientific name
Aplysina cauliformis
host sex
not applicable
host taxid
289398
identified_by
Andia Chaves Fonnegra
identifier_affiliation
FLORIDA ATLANTIC UNIVERSITY
investigation type
metagenome-assembled genome
isolation_source
Sponge: Aplysina cauliformis
local environmental context
marine biome
metagenomic source
sponge metagenome
number of standard tRNAs extracted
32
organism part
WHOLE ORGANISM
project name
ToL
relationship
unknown
sample derived from
SAMEA118013059
sample name
66f246a6-818b-4ab1-82cb-55c194f54abb
scientific_name
uncultured Pseudohongiella sp.
sequencing method
Pacbio Sequel II
specimen_id
GHC0000336
specimen_voucher
NOT COLLECTED
symbiont
N
tRNA extraction software
PROKKA (version 1.14.6)
taxonomic classification
GTDB-TK (version 2.4.0); GTDB (release 214)
taxonomic identity marker
taxonomic classification defined by topology and ANI
tolid
odAplCaul1.Pseudohongiella_sp_1