binned_metagenome: 19_bin66_SPAdes_re-assembly_contigs
Alphaproteobacteria bacterium
This sample represents a binned_metagenome assembled from the metagenomic runs ERR16864608,ERR16864618,ERR16864625,ERR16864631,ERR16864637,ERR16864643,ERR16864647,ERR16864651,ERR16864660,ERR16864665,ERR16864668 of study ERP190897.
ENA first public
2026-04-14
INSDC center name
LVBMC
INSDC status
public
Submitter Id
19_bin66_SPAdes_re-assembly_contigs
assembly quality
Many fragments with little to no review of assembly other than reporting of standard assembly statistics
assembly software
metaSPAdes_v.4.0.0
binning parameters
default
binning software
BASALT_v1.1.0
broad-scale environmental context
marine biome
collection date
2025-08-25
completeness score
29.44
completeness software
CheckM2_v1.0.1
contamination score
2.39
environmental medium
water
geographic location (country and/or sea)
Latvia
geographic location (latitude)
not provided
geographic location (longitude)
not provided
investigation type
metagenome-assembled genome
isolation_source
marine metagenome
local environmental context
marine surface water
metagenomic source
marine metagenome
project name
Marine metagenomic library of Baltic Sea from three distinct locations collected during the period from August to November 2025 in Latvia
sample derived from
SAMEA121975301,SAMEA121975302,SAMEA121975303,SAMEA121975304,SAMEA121975305,SAMEA121975306,SAMEA121975307,SAMEA121975308,SAMEA121975309,SAMEA121975310,SAMEA121975311
sample name
19_bin66_SPAdes_re-assembly_contigs
scientific_name
Alphaproteobacteria bacterium
sequencing method
DNBSEQ-G400
taxonomic identity marker
multi-marker approach