Metagenome-assembled genome: MGYG000288101
Bacteroidales bacterium
This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome generated from the metagenomic sample ERS537324 of study ERP006678.
ENA first public
2026-07-16
INSDC center name
EMG
INSDC status
public
Submitter Id
MGYG000288101
assembly quality
Many fragments with little to no review of assembly other than reporting of standard assembly statistics
assembly software
missing: third party data
binning parameters
missing: third party data
binning software
missing: third party data
broad-scale environmental context
human-associated habitat
broker name
EBI-EMG
collection date
2012
completeness score
97.4
completeness software
CheckM2_v1.1.0
contamination score
1.91
environmental medium
faeces
geographic location (country and/or sea)
China
geographic location (latitude)
55.67609700
geographic location (longitude)
12.56833700
investigation type
metagenome-assembled genome
isolation_source
human gut metagenome
local environmental context
human gut
metagenomic source
human gut metagenome
project name
Bacterial infection has long been implicated with rheumatoid arthritis (RA), but a systematic analysis of the probiotic and pathogenic microbiome in RA has been lacking. It is not clear whether and how the gut or oral microbial community is compositionally and functionally altered in RA, and whether and how the microbiota at different body sites overlap. Here we perform whole-genome shotgun sequencing for fecal, dental and salivary samples from a large cohort of RA patients, analyze metagenomic linkage groups to construct an RA classifier.
sample derived from
ERS537324
sample name
MGYG000288101
scientific_name
Bacteroidales bacterium
sequencing method
missing: third party data
taxonomic identity marker
multi-marker approach