Metagenome-assembled genome: MGYG000041642
Prevotella sp.
This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome generated from the metagenomic sample SRS3638671 of study SRP156699.
ENA first public
2026-06-12
INSDC center name
EMG
INSDC status
public
Submitter Id
MGYG000041642
assembly quality
Many fragments with little to no review of assembly other than reporting of standard assembly statistics
assembly software
missing: third party data
binning parameters
missing: third party data
binning software
missing: third party data
broad-scale environmental context
human-associated habitat
broker name
EBI-EMG
collection date
missing: third party data
completeness score
55.12
completeness software
CheckM2_v1.1.0
contamination score
0.01
environmental medium
feces
geographic location (country and/or sea)
Madagascar
geographic location (latitude)
missing: third party data
geographic location (longitude)
missing: third party data
investigation type
metagenome-assembled genome
isolation_source
human gut metagenome
local environmental context
human gut
metagenomic source
human gut metagenome
project name
Stool samples from 112 individuals (two villages) in two rural communities of north-eastern Madagascar. Samples were collected by the Madagascar Health and Environmental Research (MAHERY) initiative between 2013 and 2014, and sequenced with Illumina HiSeq 2500.
sample derived from
SRS3638671
sample name
MGYG000041642
scientific_name
Prevotella sp.
sequencing method
missing: third party data
taxonomic identity marker
multi-marker approach