PELAGICS-MAG-x4-bin097687-VATTH-SM-16may22
Pirellulales bacterium
PELAGICS-MAG-x4-bin097687-VATTH-SM-16may22: from Vättern lake
ENA first public
2026-01-14
INSDC center name
BIOLOGY CENTRE ASCR, V.V.I., INSTITUTE OF HYDROBIO
INSDC status
public
Submitter Id
PELAGICS-MAG-x4-bin097687-VATTH-SM-16may22.
assembly quality
Multiple fragments where gaps span repetitive regions. Presence of the 23S, 16S, and 5S rRNA genes and at least 18 tRNAs
assembly software
MEGAHIT
binning parameters
coverage and kmer
binning software
MetaBAT, MetaBAT2, MaxBin2
broad-scale environmental context
freshwater ecosystem
collection date
2022-05-16
completeness score
51.37
completeness software
CheckM
contamination score
0
environmental medium
natural lake
geographic location (country and/or sea)
Sweden
geographic location (latitude)
57.903267
geographic location (longitude)
14.222594
isolation_source
Vättern lake
local environmental context
freshwater lake
metagenomic source
freshwater metagenome
project name
PRJEB75477
sample derived from
ERS20515924
sample name
PELAGICS-MAG-x4-bin097687-VATTH-SM-16may22.
scientific_name
Pirellulales bacterium
taxonomic identity marker
multi-marker approach