MIMAG Metagenome-assembled Genome sample from Candidatus Arthromitus sp.
Candidatus Neoarthromitus sp.
Metagenome-assembled genome of segmented filamentous bacteria (Candidatus Arthromitus sp.) isolated from the distal ileum of Lohmann Select Leghorn layer chickens. This MAG was assembled using metagenomic Hi-C sequencing with reference-guided consensus generation and represents the first annotated genome of chicken SFB, revealing avian-specific genomic features and metabolic adaptations.
isolate
LSL-SFB
collection_date
2019
env_broad_scale
vertebrate digestive tract [ENVO:01001155]
env_local_scale
ileum
env_medium
intestinal mucosa | fecal material
geo_loc_name
USA: Iowa, Ames
isolation_source
ileum scrapings
host
chicken
lat_lon
42.0308 N 93.6319 W
biol_stat
natural
chem_administration
None
host_age
14 days
host_common_name
chicken
host_disease
None
host_life_stage
juvenile
host_sex
female
host_subspecf_genlin
breed:Lohmann Select Leghorn
host_tissue_sampled
Ileum
BioSampleModel
MIMAG.host-associated