PELAGICS-MAG-m2-bin126155-TSKOE-SM-02sep20
Chitinophagales bacterium
PELAGICS-MAG-m2-bin126155-TSKOE-SM-02sep20: from Tałtowisko lake
ENA first public
2026-01-14
INSDC center name
BIOLOGY CENTRE ASCR, V.V.I., INSTITUTE OF HYDROBIO
INSDC status
public
Submitter Id
PELAGICS-MAG-m2-bin126155-TSKOE-SM-02sep20.
assembly quality
Multiple fragments where gaps span repetitive regions. Presence of the 23S, 16S, and 5S rRNA genes and at least 18 tRNAs
assembly software
MEGAHIT
binning parameters
coverage and kmer
binning software
MetaBAT, MetaBAT2, MaxBin2
broad-scale environmental context
freshwater ecosystem
collection date
2020-09-02
completeness score
79.72
completeness software
CheckM
contamination score
4.6
environmental medium
natural lake
geographic location (country and/or sea)
Poland
geographic location (latitude)
53.875833
geographic location (longitude)
21.567778
isolation_source
Tałtowisko lake
local environmental context
freshwater lake
metagenomic source
freshwater metagenome
project name
PRJEB75477
sample derived from
ERS20515913
sample name
PELAGICS-MAG-m2-bin126155-TSKOE-SM-02sep20.
scientific_name
Chitinophagales bacterium
taxonomic identity marker
multi-marker approach