Metagenome-assembled genome: ERR14218705_bin_1777
Mediterraneibacter torques
This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run ERR14218705 of study ERP157310.
ENA first public
2026-02-26
INSDC center name
EMG
INSDC status
public
Submitter Id
ERR14218705_bin_1777
assembly quality
Many fragments with little to no review of assembly other than reporting of standard assembly statistics
assembly software
metaspades_v3.15.5
binning parameters
default
binning software
MGnify-genomes-generation-pipeline_v2.0.0
broad-scale environmental context
human
broker name
EBI-EMG
collection date
2019
completeness score
50.12
completeness software
CheckM2_v1.0.1
contamination score
0.38
environmental medium
intestine
geographic location (country and/or sea)
Italy
geographic location (latitude)
missing: third party data
geographic location (longitude)
missing: third party data
investigation type
metagenome-assembled genome
isolation_source
human gut metagenome
local environmental context
digestive system
metagenomic source
human gut metagenome
project name
Shotgun metagenomic stool samples for control, adenoma and CRC patients from Clinica S. Rita in Vercelli, Italy. This cohort was established as part of the ONCOBIOME consortium and it involves healthy controls, adenoma and CRC patients at different diseases-stages, as well as at different primary tumor locations.
sample derived from
SAMEA115285108
sample name
ERR14218705_bin_1777
scientific_name
[Ruminococcus] torques
sequencing method
unspecified
taxonomic identity marker
multi-marker approach