ff7cc837-0202-43a4-88de-5810a085e030-asg-bin.148
Phycisphaerales bacterium
16S recovery software
PROKKA (version 1.14.6)
16s recovered
Yes
ENA first public
2025-03-18
GAL
Nova Southeastern University
GAL_sample_id
NOT PROVIDED
INSDC center name
Tree of Life Programme
INSDC status
public
MAG coverage software
Minimap2 (version 2.24-r1122)
Submitter Id
ff7cc837-0202-43a4-88de-5810a085e030
assembly quality
Many fragments with little to no review of assembly other than reporting of standard assembly statistics
assembly software
metaMDBG (version 0.3)
binning parameters
coverage; graph
binning software
MetaBat (version 2.15); DASTOOL (version 1.1.5)
broad-scale environmental context
aquatic biome
collected_by
SENJIE LIN
collecting institution
UNIVERSITY OF CONNECTICUT
collection date
2021-04-10
completeness score
79.83
completeness software
checkM (version 1.2.2); checkM_DB (release 2015-01-16)
contamination score
0.0
depth
0
environmental medium
euglenozoa culture
geographic location (country and/or sea)
USA
geographic location (latitude)
41.32
geographic location (longitude)
-72.06
geographic location (region and locality)
University of Connecticut | Avery Point campus
habitat
Estuary
host life stage
not applicable
host scientific name
Eutreptiella sp. Long Island Sound 2002
host sex
not applicable
host taxid
1298769
identified_by
SENJIE LIN | RITA KUO
identifier_affiliation
UNIVERSITY OF CONNECTICUT
investigation type
metagenome-assembled genome
isolation_source
Euglenozoa: Eutreptiella sp. Long Island Sound 2002
local environmental context
estuarine biome
metagenomic source
protist metagenome
number of standard tRNAs extracted
43
organism part
WHOLE ORGANISM
project name
ASG
relationship
Endosymbiont
sample derived from
SAMEA117833281
sample name
ff7cc837-0202-43a4-88de-5810a085e030
scientific_name
Phycisphaerales bacterium
sequencing method
Pacbio Sequel II
specimen_id
NSU0024001
specimen_voucher
CCMP3347
tRNA extraction software
PROKKA (version 1.14.6)
taxonomic classification
GTDB-TK (version 2.4.0); GTDB (release 214)
taxonomic identity marker
taxonomic classification defined by topology and ANI
tolid
peEutLong1.Phycisphaerales_1