Diseased weaned piglet fecal sample - 16S amplicon
gut metagenome
16S amplicon sequencing (full-length 16S rRNA gene) from fecal sample of a gastrointestinal disease-affected weaned piglet, sequenced on Oxford Nanopore MinION.
collection_date
2021
env_broad_scale
animal-associated habitat
env_local_scale
gastrointestinal tract
env_medium
feces
geo_loc_name
South Korea
host
Sus scrofa domesticus
lat_lon
not collected
host_age
8 weeks
host_common_name
pig
host_disease
gastrointestinal disease (diarrhea)
host_life_stage
weaned piglet
host_subject_id
Diseased_B14
host_taxid
9825
host_tissue_sampled
feces (rectal)
isolation_source
rectal fecal sample
samp_collect_device
sterile collection tube
samp_mat_process
DNA extracted using QIAamp PowerFecal DNA Kit (Qiagen)
samp_store_temp
-80 C
BioSampleModel
MIMARKS.survey
BioSampleModel
MIGS/MIMS/MIMARKS.host-associated