18S V4 rRNA, Culturable protist diversity, from sediment collected in October, 2017, at Banyuls-sur-Mer, and enriched on a Vibrio tasmaniensis LGP32 lawn
marine sediment metagenome
INSDC center name
Ifremer
Submitter Id
sam_vibram_10-17-Ba-S-LGP32
broad-scale environmental context
mediterranean sea biome [ENVO:01000047]
broker name
SeBiMER
collection date
2017-10-11
common name
marine sediment metagenome
depth
30
elevation
not applicable
environmental medium
shallow marine sediment [ENVO:03000034]
environmental package
Sediment
environmental_sample
Yes
geographic location (country and/or sea)
France
geographic location (latitude)
42.488333
geographic location (longitude)
3.145
geographic location (region and locality)
Banyuls-sur-Mer, SOLA site
investigation type
metagenome
isolation_source
Surface sediment. First centimeters of sediments with cores taken by scuba divers at 30 meters deep.
local environmental context
coast [ENVO:01000687]
project name
vibram
sample name
sam_vibram_10-17-Ba-S-LGP32
sample_checklist_description
GSC_MIxS_sediment
sample_description
18S rRNA (v4 loop) of protist metagenome from sediment collected in October of 2017, near the marine protected area of Banyuls-sur-Mer at SOLA station, enriched by culturing on bacterial layers (Vibrio tasmaniensis LGP32) on agar plates for 2 weeks
sample_name
10-17-Ba-S-LGP32
scientific_name
marine sediment metagenome
target gene
18S rRNA
target subfragment
V4