PELAGICS-MAG-mu-bin022431-PLESE-LM-01jun20
Occallatibacter sp.
PELAGICS-MAG-mu-bin022431-PLESE-LM-01jun20: from Plešné lake
assembly software
MEGAHIT
binning software
MetaBAT, MetaBAT2, MaxBin2
organism
Terracidiphilus sp.
broad-scale environmental context
freshwater ecosystem
assembly quality
Multiple fragments where gaps span repetitive regions. Presence of the 23S, 16S, and 5S rRNA genes and at least 18 tRNAs
collection date
2020-06-01
sample derived from
ERS20515760
geographic location (longitude)
13.8676142
taxonomic identity marker
multi-marker approach
binning parameters
coverage and kmer
completeness score
63.61
contamination score
1.29
environmental medium
natural lake
geographic location (latitude)
48.7775469
scientific_name
Terracidiphilus sp.
local environmental context
freshwater lake
metagenomic source
freshwater metagenome
project name
PRJEB75477
completeness software
CheckM
geographic location (country and/or sea)
Czechia
isolation_source
Plešné lake