binned_metagenome: ERR10033207_3617_bin
Phascolarctobacterium faecium
This sample represents a Third Party Annotation (TPA) binned_metagenome generated from the metagenomic run ERR10033207 of study ERP120353.
ENA first public
2026-07-03
INSDC center name
EMG
INSDC status
public
Submitter Id
ERR10033207_3617_bin
assembly quality
Many fragments with little to no review of assembly other than reporting of standard assembly statistics
assembly software
metaspades v3.15.5
binning parameters
default
binning software
MGnify-genomes-generation-pipeline_v2.0.0
broad-scale environmental context
human
broker name
EBI-EMG
collection date
2017
completeness score
99.56
completeness software
CheckM2_v1.0.1
contamination score
0.23
environmental medium
gut
geographic location (country and/or sea)
USA
geographic location (latitude)
40.00000000
geographic location (longitude)
-100.00000000
investigation type
metagenome-assembled genome
isolation_source
human gut metagenome
local environmental context
digestive system
metagenomic source
human gut metagenome
project name
In this study shotgun metagenomic and targeted metabolomic was used to investigate drug metabolism potential of complex gut communities deriving from human/non human hosts.
sample derived from
SAMEA110463749
sample name
ERR10033207_3617_bin
scientific_name
Phascolarctobacterium faecium
sequencing method
None
taxonomic identity marker
multi-marker approach