T3_178_R2
Hemileia vastatrix
strain
Coffee rust fungus
isolate
CIFC Hv 178, Race VIII, hosted at the Collection of Centro de Investigao das Ferrugens o Cafeeiro (CIFC), Instituto Superior de Agronomia (ISA), Universidade de Lisboa
collected_by
Centro de Investigao das Ferrugens o Cafeeiro (CIFC), Instituto Superior de Agronomia (ISA), Universidade de Lisboa
collection_date
2019
geo_loc_name
Portugal: Oeiras_Greenhouse Centro de Investigao das Ferrugens o Cafeeiro (CIFC)
host
Coffea arabica selection 34/13
host_disease
Coffee leaf rust (CLR)
isolation_source
Infected leaves at 10 days post inoculation (dpi), biological replicate 2
lat_lon
NA
library_id
HV178T2R2
title
RNA-seq of compatible interaction C. arabica sel 34/13-Hv178 at 10 day post inoculation
library_strategy
RNA-Seq
library_source
TRANSCRIPTOMIC
library_selection
PolyA
library_layout
paired
platform
ILLUMINA
instrument_model
Illumina NovaSeq 6000
design_description
Dual RNA-seq of coffee leaves infected with Hemileia vastatrix at 10 day post inoculation_bilogical replicate 2
filetype
fastq
filename
Hv178_R2_T3_1.fastq
filename2
Hv178_R2_T3_2.fastq
BioSampleModel
Pathogen.cl