18S V4 rRNA, Culturable protist diversity, from sediment collected in January, 2017, at Sete, and enriched on an E. coli lawn
marine sediment metagenome
INSDC center name
Ifremer
Submitter Id
sam_vibram_09-17-Se-S-E-coli
broad-scale environmental context
mediterranean sea biome [ENVO:01000047]
broker name
SeBiMER
collection date
2017-09-11
common name
marine sediment metagenome
depth
10
elevation
not applicable
environmental medium
shallow marine sediment [ENVO:03000034]
environmental package
Sediment
environmental_sample
Yes
geographic location (country and/or sea)
France
geographic location (latitude)
43.392317
geographic location (longitude)
3.698883
geographic location (region and locality)
Sete harbor, open sea
investigation type
metagenome
isolation_source
Surface sediment. First centimeters of sediments with cores taken by scuba divers at 10 meters deep.
local environmental context
coast [ENVO:01000687]|artificial harbor [ENVO:00000464]
project name
vibram
sample name
sam_vibram_09-17-Se-S-E-coli
sample_checklist_description
GSC_MIxS_sediment
sample_description
18S rRNA (v4 loop) of protist metagenome from sediment collected in September of 2017, in the open sea close to Sete harbor, enriched by culturing on bacterial layers (E. coli) on agar plates for 2 weeks
sample_name
09-17-Se-S-E-coli
scientific_name
marine sediment metagenome
target gene
18S rRNA
target subfragment
V4