M RNA
Mus musculus
Protocols: iBMDM were infected with WT or ΔprgJ Salmonella Typhimurium or mock infected for 60 min. Cells were lysed in buffer containing cycloheximide and chloramphenicol, and lysates were split for RNA-Seq and Ribo-Seq. For Ribo-Seq, lysates were treated with RNase I and fragments protected from digestion by the ribosome were purified. For RNA-Seq, total cellular RNA was fragmented by alkaline hydrolysis. Both produce short RNA fragments, from which libraries were generated.
ENA first public
2025-08-29
INSDC center name
University of Cambridge Department of Pathology
INSDC status
public
Submitter Id
E-MTAB-15534:M RNA
broker name
ArrayExpress
cell line
iBMDM
cell type
macrophage
collection date
not collected
common name
house mouse
developmental stage
adult
disease
normal
genotype
wild type genotype
geographic location (country and/or sea)
not collected
infect
Mock
isolate
not applicable
organism part
Bone marrow derrived macrophage
sample name
E-MTAB-15534:M RNA
scientific_name
Mus musculus