CF sputum metagenome CO27 (AZM+, Leeds-, ETI-)
lung metagenome
Sputum sample from a cystic fibrosis patient (CO27). Azithromycin prophylaxis: AZM+. PA colonisation by Leeds criteria: Leeds-. ivacaftor/lumacaftor+ivacaftor (ETI) therapy: ETI-.
ENA first public
2026-06-30
INSDC center name
UMR 1078, Genetics, functional genomics and biotechnology
INSDC status
public
Submitter Id
CO27
broad-scale environmental context
human-associated habitat [ENVO:01001057]
collection date
2019-11-28
environmental medium
sputum [ENVO:02000042]
geographic location (country and/or sea)
France
geographic location (latitude)
48.3899
geographic location (longitude)
-4.48333
host
Homo sapiens
host disease status
cystic fibrosis
local environmental context
respiratory tract environment [ENVO:01001047]
project name
CIMENT-omics
sample name
CO27
scientific_name
lung metagenome
sequencing method
Illumina paired-end shotgun sequencing