Metagenome-assembled genome: ERR594329_metabat2_35_concoct_146
Ostreococcus lucimarinus CCE9901
This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic runs ERR594329,ERR868473 of study ERP001737.
ENA first public
2025-12-12
INSDC center name
EBI
INSDC status
public
Submitter Id
ERR594329_metabat2_35_concoct_146
assembly quality
Many fragments with little to no review of assembly other than reporting of standard assembly statistics
assembly software
MEGAHIT_v1.2.9
binning parameters
default
binning software
MGnify-genomes-generation-pipeline_v1.3.0
broad-scale environmental context
marine biome (ENVO:00000447)
broker name
EBI-EMG
collection date
missing: third party data
completeness score
60.2
completeness software
EukCC_v2.1.3
contamination score
0.4
environmental medium
saline water (ENVO:00002010) and particulate matter, including plankton (ENVO:xxxxxxxx)
geographic location (country and/or sea)
missing: third party data
geographic location (latitude)
39.0609
geographic location (longitude)
5.9422
investigation type
metagenome-assembled genome
isolation_source
marine metagenome
local environmental context
deep chlorophyll maximum layer (ENVO:xxxxxxxx)
metagenomic source
marine metagenome
project name
Seawater was filtered from different depths to retain small cell sizes. The DNA was extracted and submitted to high throughput sequencing.
sample derived from
SAMEA2619548,SAMEA2619551
sample name
ERR594329_metabat2_35_concoct_146
scientific_name
Ostreococcus lucimarinus CCE9901
sequencing method
Illumina HiSeq 2000
taxonomic identity marker
multi-marker approach