Metagenome-assembled genome: ERR599146_metabat2_28_concoct_125
Ostreococcus lucimarinus CCE9901
This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic runs ERR599146,SRR25194356 of study ERP001736.
ENA first public
2025-12-12
INSDC center name
EBI
INSDC status
public
Submitter Id
ERR599146_metabat2_28_concoct_125
assembly quality
Many fragments with little to no review of assembly other than reporting of standard assembly statistics
assembly software
MEGAHIT_v1.2.9
binning parameters
default
binning software
MGnify-genomes-generation-pipeline_v1.3.0
broad-scale environmental context
marine biome (ENVO:00000447)
broker name
EBI-EMG
collection date
not provided
completeness score
96.6
completeness software
EukCC_v2.1.3
contamination score
0.8
environmental medium
saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
geographic location (country and/or sea)
not applicable
geographic location (latitude)
not provided
geographic location (longitude)
not provided
investigation type
metagenome-assembled genome
isolation_source
marine metagenome
local environmental context
surface water layer (ENVO:00002042)
metagenomic source
marine metagenome
project name
Seawater was filtered from different depths to retain small cell sizes (Bacteria Organisms). The DNA was extracted and submitted to high throughput sequencing.
sample derived from
SAMEA2620855,SAMN36290453
sample name
ERR599146_metabat2_28_concoct_125
scientific_name
Ostreococcus lucimarinus CCE9901
sequencing method
Illumina HiSeq 2000,Illumina HiSeq 2500
taxonomic identity marker
multi-marker approach