Metagenome-assembled genome: ERR599146_metabat2_28_metabat2_20
Bathycoccus prasinos
This sample represents a Metagenome-assembled genome assembled from the metagenomic runs ERR599146 of study ERP001736.
ENA first public
2025-12-12
INSDC center name
NIH/NHGRI
INSDC status
public
Submitter Id
ERR599146_metabat2_28_metabat2_20
assembly quality
Many fragments with little to no review of assembly other than reporting of standard assembly statistics
assembly software
MEGAHIT_v1.2.9
binning parameters
default
binning software
MGnify-genomes-generation-pipeline_v1.3.0
broad-scale environmental context
marine biome (ENVO:00000447)
collection date
missing: third party data
completeness score
90.4
completeness software
EukCC_v2.1.3
contamination score
1.0
environmental medium
saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
geographic location (country and/or sea)
missing: third party data
geographic location (latitude)
-35.1728
geographic location (longitude)
26.2868
investigation type
metagenome-assembled genome
isolation_source
marine metagenome
local environmental context
surface water layer (ENVO:00002042)
metagenomic source
marine metagenome
project name
Seawater was filtered from different depths to retain small cell sizes (Bacteria Organisms). The DNA was extracted and submitted to high throughput sequencing.
sample derived from
SAMEA2620855
sample name
ERR599146_metabat2_28_metabat2_20
scientific_name
Bathycoccus prasinos
sequencing method
Illumina HiSeq 2000
taxonomic identity marker
multi-marker approach