R2 water replicate 1 (barcode07)
aquatic metagenome
Surface water sample collected at river estuary adjacent to a fish farm and community garden.
collection_date
2025-04-17
depth
0.5 m
env_broad_scale
freshwater biome [ENVO:00000873]
env_local_scale
estuary [ENVO:00000045]
env_medium
water [ENVO:00002006]
geo_loc_name
Israel: Taninim River, estuary (R2)
lat_lon
32.5386 N 34.9039 E
collection_method
sterile 1 L bottle (surface grab)
elev
0 m
misc_param
pH measured with portable pH meter; estuarine site; adjacent anthropogenic sources include a fish farm and community garden
ph
8
salinity
40 ppt
samp_collect_device
sterile 1 L bottle (surface grab)
samp_mat_process
surface water collected in sterile 1 L bottles and transported to the laboratory; water filtered through 0.22 um Sterivex filter; cells lysed with lysozyme, SDS, and proteinase K; DNA extracted by phenol:chloroform:isoamyl alcohol (25:24:1) and precipitated with ethanol
samp_size
1 L
samp_vol_we_dna_ext
1 L
temp
22 C
biological_replicate
replicate 1
replicate_notes
independent biological replicate 1 of R2 water sample
BioSampleModel
MIMARKS.survey
BioSampleModel
MIGS/MIMS/MIMARKS.water