Control 23
human gut metagenome
Stool sample from military deployment returnee not exposed to antimalarial chemoprophylaxis with doxycycline
ENA first public
2026-01-01
INSDC center name
USB
INSDC status
public
Submitter Id
Control04
broad-scale environmental context
war zone (ENVO term has been requested)
collection date
2013
deployment
Uganda
environmental medium
fecal material (ENVO:00002003)
ethnicity
German
experimental factor
compound based treatment (EFO:EFO_0000369)
geographic location (country and/or sea)
Germany
geographic location (latitude)
53.547014
geographic location (longitude)
9.965385
host age
50 years
host body site
Feces (fma:fma64183)
host occupation
47=47 Other
host scientific name
Homo sapiens
host sex
male
library construction method
Illumina DNA Prep
library reads sequenced
21872696
local environmental context
fecal environment (ENVO:01001029)
medical history performed
Yes
nucleic acid extraction
QiaAMP DNA stool mini kit
oxygenation status of sample
aerobic
project name
Doxycycline Metagenomics 2025
reference for biomaterial
human stool sample
sample collection device
stool sample tube
sample collection method
self-sampling of stool
sample material processing
DNA extraction
sample name
Control04
sample storage duration
12 years
sample storage location
Germany
sample storage temperature
20
sample volume or weight for DNA extraction
0.2mL stool suspension
scientific_name
human gut metagenome
sequence quality check
software