human gut metagenome
stool sample 18NAVY30_V2
ENA first public
2025-11-21
INSDC center name
UCSDMI
INSDC status
public
Submitter Id
qiita_sid_10513:10513.66106
add_attempted
20.2
add_attempted_b1
21
add_attempted_changefromb1
-0.8
add_corr30
LOW30
add_corr35
LOW35
add_correct
20
add_correct_b1
21
add_correct_changefromb1
-1
add_percent
98.55392156862746
add_percent_b1
100
add_percent_changefromb1
1.4460784313725412
age
28
age_units
years
anonymized_name
66106_fecal
bmi
21.55
collection date
2018-02-16
collection_time
9:32
collection_timesincesp1wake
2.42
collection_timestamp
2018-02-16 09:32
condition
baseline
condition_by_visit
baseline_visit2
condition_numeric
1
conjvstargab30
LOW30
conjvstargab35
LOW35
country
USA
cptcort30
LOW30
cptcort35
LOW35
cytokinecluster
2
dna_extracted
TRUE
elevation
1629
empo_1
Host-associated
empo_2
Host-associated (non-saline)
empo_3
Animal (non-saline)
empo_4
Animal distal gut (non-saline)
env_biome
urban biome
env_feature
human-associated habitat
env_material
fecal material
env_package
human-gut
fast_duration_hrs
not provided
fecalmicrobiomebetadiv30
LOW30
fecalmicrobiomebetadiv35
LOW35
fronzenimmediately
yes
geo_loc_name
USA:CO:Boulder
geographic location (country and/or sea)
USA
height
183.5
height_unit
cm
hemolysed
not applicable
host scientific name
Homo sapiens
host_age
28
host_age_units
years
host_body_habitat
UBERON:feces
host_body_mass_index
21.55
host_body_product
UBERON:feces
host_body_site
UBERON:feces
host_common_name
human
host_height
183.5
host_height_units
cm
host_life_stage
adult
host_subject_id
18NAVY30
host_subject_id_letter
r
host_taxid
9606
host_weight
72.57
host_weight_units
kg
kss_beginning
5.333333333333333
kss_beginning_b1
3
kss_beginning_changefromb1
2.3333333333333335
kss_end
5.4
kss_end_b1
3
kss_end_changefromb1
2.4
kss_middle
5.4
kss_middle_b1
3
kss_middle_changefromb1
2.4
latitude
40.1
longitude
-107.2
metabolomics
yes
missedtargetspc_changefromb1
0
ms_experiment
01
ms_filename
18navy30.v2.20180216.mzxml
ms_plate_position
1_c10
ms_runorder
38
mwt30
HIGH30
mwt35
HIGH35
mwt_sol1stepochsleep
13.6
mwt_sol1stepochsleep_12
morethan12min
mwt_sol1stepochsleep_8
morethan8min
mwt_sol1stepochsleep_binary
high
mwt_sol1stepochstage2
20
mwtmin
HIGH14min
nas_beginning
45.889375
nas_beginning_b1
51.431250000000006
nas_beginning_changefromb1
-5.541875
nas_end
58.925
nas_end_b1
42.759375000000006
nas_end_changefromb1
16.165625000000002
pas_beginning
460.16875
pas_beginning_b1
610.63125
pas_beginning_changefromb1
-150.4625
pas_end
426.80687500000005
pas_end_b1
646.7343750000002
pas_end_changefromb1
-219.9275
physical_specimen_location
CU Boulder_Wright Lab
physical_specimen_remaining
TRUE
plasma_sample
not applicable
plasma_sample_1_10
not applicable
plasma_sample_reltime
not applicable
psg_finalstageawakening_sp3
w
psg_finalstageawakening_sp4
2
psg_remlfromsol10min_sp3
-5.5
psg_remlfromsol10min_sp4
52
psg_remlfromsol3min_sp3
2
psg_remlfromsol3min_sp4
52
psg_remmin_sp3
86.5
psg_remmin_sp4
49.5
psg_rempc_sp3
0.480555556
psg_rempc_sp4
0.275
psg_se_sp3
0.808333333
psg_se_sp4
0.969444444
psg_sol10_10min_sp3
13
psg_sol10_10min_sp4
4
psg_sol3_1p5min_sp3
5.5
psg_sol3_1p5min_sp4
4
psg_stage1min_sp3
12.5
psg_stage1min_sp4
4
psg_stage1pc_sp3
0.069444444
psg_stage1pc_sp4
0.022222222
psg_stage2min_sp3
14.5
psg_stage2min_sp4
58
psg_stage2pc_sp3
0.080555556
psg_stage2pc_sp4
0.322222222
psg_stage34min_sp3
32
psg_stage34min_sp4
63
psg_stage34pc_sp3
0.177777778
psg_stage34pc_sp4
0.35
psg_swslfromsol10_10min_sp3
11.5
psg_swslfromsol10_10min_sp4
11.5
psg_swslfromsol3_1p5min_sp3
19
psg_swslfromsol3_1p5min_sp4
11.5
psg_totalrecordingtime_sp3
180
psg_totalrecordingtime_sp4
180
psg_totalwakemin_sp3
34.5
psg_totalwakemin_sp4
5.5
psg_totalwakepc_sp3
0.191666667
psg_totalwakepc_sp4
0.030555556
psg_tst_sp3
145.5
psg_tst_sp4
174.5
psg_wasofromsol10min_sp3
28.5
psg_wasofromsol10min_sp4
1.5
psg_wasofromsol3min_sp3
30
psg_wasofromsol3min_sp4
1.5
pvt_1overmeanrt
0.002988836
pvt_1overmeanrt_b1
0.003536538
pvt_1overmeanrt_binary
high
pvt_1overmeanrt_changefromb1
-5.48E-04
pvt_1overmedrt
0.003305308
pvt_1overmedrt_b1
0.003773585
pvt_1overmedrt_changefromb1
-4.68E-04
pvt_1overslowestrt
0.001715548
pvt_1overslowestrt_b1
0.002245173
pvt_1overslowestrt_binary
high
pvt_1overslowestrt_changefromb1
-5.30E-04
pvt_anticipated
1.8
pvt_anticipations_b1
3
pvt_anticipations_changefromb1
-1.2
pvt_fastestrt
229.12925333333337
pvt_fastestrt_b1
213.19999999999993
pvt_fastestrt_binary
low
pvt_fastestrt_changefromb1
15.929253333333346
pvt_lapses
8.2
pvt_lapses_b1
2
pvt_lapses_binary
low
pvt_lapses_changefromb1
6.2
pvt_logstdrt
2.0773907144009884
pvt_logstdrt_b1
1.8502742610493852
pvt_logstdrt_binary
low
pvt_logstdrt_changefromb1
0.2271164533516036
pvtlapses30
LOW30
pvtlapses35
LOW35
qiita_sample_type
feces
remlfromsol3min_sp3
2
remlfromsol3min_sp4
52
remmin_sp3
86.5
remmin_sp4
49.5
rempc_sp3
0.480555556
rempc_sp4
0.275
sample name
qiita_sid_10513:10513.66106
sample_type
feces
scientific_name
human gut metagenome
segment_fecal
bl
segment_fecal_2early_mic
bl
segment_fecal_2late_mic
bl
segment_fecal_3_mic
bl
segment_fecal_met
bl
segment_fecal_numeric
0
segment_fecal_shotgun
bl
sex
male
shotgun
yes
sixteen_s
yes
stage1min_sp3
12.5
stage1pc_sp3
0.069444444
stage1pc_sp4
0.022222222
stage2pc_sp3
0.080555556
stage2pc_sp4
0.322222222
stage34min_sp3
32
stroop_congruent_medrtc
496.43333333333334
stroop_congruent_medrtc_b1
480.5
stroop_congruent_medrtc_changefromb1
15.933333333333334
stroop_incongruent_medrtc
555.1666666666666
stroop_incongruent_medrtc_b1
517
stroop_incongruent_medrtc_changefromb1
38.166666666666664
stroop_inhibitorycontrol
58.733333333333334
stroop_inhibitorycontrol_b1
36.5
stroop_inhibitorycontrol_binary
low
stroop_inhibitorycontrol_changefromb1
22.233333333333334
stroop_neutral_medrtc
528.6333333333333
stroop_neutral_medrtc_b1
486
stroop_neutral_medrtc_changefromb1
42.63333333333333
stroopincmrtc30
LOW30
stroopincmrtc35
LOW35
vas_alert
44.25400000000001
vas_alert_binary
high
visit
2
vs_ct
19.164291836713744
vs_ct_b1
18.923076923076923
vs_ct_changefromb1
0.2412149136368221
vs_medrtc
576.4666666666667
vs_medrtc_b1
518
vs_medrtc_changefromb1
58.46666666666667
vs_medrtc_targetabsent
638.2666666666667
vs_medrtc_targetabsent_b1
568
vs_medrtc_targetabsent_changefromb1
70.26666666666667
vs_medrtc_targetpresent
513.3333333333334
vs_medrtc_targetpresent_b1
449
vs_medrtc_targetpresent_changefromb1
64.33333333333333
vs_missedtargetspc
5.845281563553103
vs_missedtargetspc_b1
5.660377358490567
vs_missedtargetspc_changefromb1
0.18490420506253596
vs_slopetargetabsent
3.838
vs_slopetargetabsent_b1
0.04
vs_slopetargetabsent_binary
low
vs_slopetargetabsent_changefromb1
3.798
vs_slopetargetpresent
1.7036666666666667
vs_slopetargetpresent_b1
1.305
vs_slopetargetpresent_changefromb1
0.39866666666666667
wakeperiod
0
wasosp330
HIGH30
wasosp335
HIGH35
weight_kg
72.57
weight_unit
kg