Corynebacterium tuberculostearicum
This sample represents a binned metagenome assembled from the metagenomic runs SRR1632816, SRR1632817, SRR1632818, SRR1632819, SRR1632820, SRR1632821, SRR3184945, SRR3184946, SRR3191699, SRR3191700, SRR3191701, SRR3191702, SRR3191703 of study SRP002480.
INSDC center name
NIH/NHGRI
Submitter Id
SAMPLE_173_bin.5
assembly quality
Many fragments with little to no review of assembly other than reporting of standard assembly statistics
assembly software
metaSPAdes_v3.13.0
binning parameters
--maxbin2 --metabat2 --concoct
binning software
metaWRAP_v1.2.1
broad-scale environmental context
human skin
collection date
not applicable
completeness score
81.67
completeness software
CheckM_v1.1.2
contamination score
1.21
environmental medium
Skin swab
geographic location (country and/or sea)
USA
geographic location (latitude)
not applicable
geographic location (longitude)
not applicable
investigation type
metagenome-assembled genome
isolation_source
human skin metagenome
local environmental context
Ph-L,Ph-R
metagenomic source
human skin metagenome
project name
Metagenomic assemblies and bins underlying the Skin Microbial Genome Catalogue
sample derived from
ERS25060508
sample name
SAMPLE_173_bin.5
scientific_name
Corynebacterium tuberculostearicum
sequencing method
Illumina HiSeq 2000
taxonomic identity marker
multi-marker approach