Staphylococcus auricularis
This sample represents a binned metagenome assembled from the metagenomic runs SRR1631474, SRR1631475, SRR1631476, SRR1631477, SRR1631478, SRR1631479, SRR3185003, SRR3185004, SRR3185005, SRR3185006, SRR3185007, SRR3186833, SRR3186834, SRR3186835, SRR3186836, SRR3186837 of study SRP002480.
INSDC center name
NIH/NHGRI
Submitter Id
SAMPLE_147_bin.1
assembly quality
Many fragments with little to no review of assembly other than reporting of standard assembly statistics
assembly software
metaSPAdes_v3.13.0
binning parameters
--maxbin2 --metabat2 --concoct
binning software
metaWRAP_v1.2.1
broad-scale environmental context
human skin
collection date
not applicable
completeness score
99.45
completeness software
CheckM_v1.1.2
contamination score
0.05
environmental medium
Skin wash
geographic location (country and/or sea)
USA
geographic location (latitude)
not applicable
geographic location (longitude)
not applicable
investigation type
metagenome-assembled genome
isolation_source
human skin metagenome
local environmental context
Ea-R
metagenomic source
human skin metagenome
project name
Metagenomic assemblies and bins underlying the Skin Microbial Genome Catalogue
sample derived from
ERS25060484
sample name
SAMPLE_147_bin.1
scientific_name
Staphylococcus auricularis
sequencing method
Illumina HiSeq 2000
taxonomic identity marker
multi-marker approach