human gut metagenome
stool sample 18NAVY27_V1
ENA first public
2025-11-21
INSDC center name
UCSDMI
INSDC status
public
Submitter Id
qiita_sid_10513:10513.62804
add_attempted
23.928571428571427
add_attempted_b1
27
add_attempted_changefromb1
-3.071428571
add_corr30
NA
add_corr35
NA
add_correct
23.285714285714285
add_correct_b1
27
add_correct_changefromb1
-3.714285714
add_percent
97.55625011059794
add_percent_b1
100
add_percent_changefromb1
2.4437498894020564
age
21
age_units
years
anonymized_name
62804_fecal
bmi
23.93
collection date
2018-01-21
collection_time
0:01
collection_timesincesp1wake
42.18
collection_timestamp
2018-01-21 00:01
condition
scd
condition_by_visit
scd_visit1
condition_numeric
2
conjvstargab30
HIGH30
conjvstargab35
HIGH35
country
USA
cptcort30
NA
cptcort35
NA
cytokinecluster
3
dna_extracted
TRUE
elevation
1629
empo_1
Host-associated
empo_2
Host-associated (non-saline)
empo_3
Animal (non-saline)
empo_4
Animal distal gut (non-saline)
env_biome
urban biome
env_feature
human-associated habitat
env_material
fecal material
env_package
human-gut
fast_duration_hrs
not provided
fecalmicrobiomebetadiv30
NA
fecalmicrobiomebetadiv35
NA
fronzenimmediately
yes
geo_loc_name
USA:CO:Boulder
geographic location (country and/or sea)
USA
height
187.96
height_unit
cm
hemolysed
not applicable
host scientific name
Homo sapiens
host_age
21
host_age_units
years
host_body_habitat
UBERON:feces
host_body_mass_index
23.93
host_body_product
UBERON:feces
host_body_site
UBERON:feces
host_common_name
human
host_height
187.96
host_height_units
cm
host_life_stage
adult
host_subject_id
18NAVY27
host_subject_id_letter
p
host_taxid
9606
host_weight
85.27
host_weight_units
kg
kss_beginning
5
kss_beginning_b1
4.666666666666667
kss_beginning_changefromb1
0.3333333333333333
kss_end
5.2
kss_end_b1
3.7333333333333334
kss_end_changefromb1
1.4666666666666666
kss_middle
5.357142857142857
kss_middle_b1
3
kss_middle_changefromb1
2.357142857142857
latitude
40.1
longitude
-107.2
metabolomics
yes
ms_experiment
01
ms_filename
18navy27.v1.20180121.mzxml
ms_plate_position
1_a03
ms_runorder
05
mwt30
NA
mwt35
HIGH35
mwt_sol1stepochsleep
16.423076923076923
mwt_sol1stepochsleep_binary
high
mwtmin
HIGH14min
nas_beginning
32.43533333333333
nas_beginning_b1
14.317333333333334
nas_beginning_changefromb1
18.118
nas_end
51.383333333333326
nas_end_b1
34.32799999999999
nas_end_changefromb1
17.05533333333333
pas_beginning
384.90733333333327
pas_beginning_b1
475.9906666666665
pas_beginning_changefromb1
-91.08333333
pas_end
401.076
pas_end_b1
547.008
pas_end_changefromb1
-145.932
physical_specimen_location
CU Boulder_Wright Lab
physical_specimen_remaining
TRUE
plasma_sample
not applicable
plasma_sample_1_10
not applicable
plasma_sample_reltime
not applicable
psg_finalstageawakening_sp3
2
psg_finalstageawakening_sp4
r
psg_remlfromsol10min_sp3
4.5
psg_remlfromsol10min_sp4
66.5
psg_remlfromsol3min_sp3
4.5
psg_remlfromsol3min_sp4
66.5
psg_remmin_sp3
51.5
psg_remmin_sp4
14.5
psg_rempc_sp3
0.286111111
psg_rempc_sp4
0.081460674
psg_se_sp3
0.922222222
psg_se_sp4
0.941011236
psg_sol10_10min_sp3
6.5
psg_sol10_10min_sp4
3.5
psg_sol3_1p5min_sp3
6.5
psg_sol3_1p5min_sp4
3.5
psg_stage1min_sp3
15
psg_stage1min_sp4
3.5
psg_stage1pc_sp3
0.083333333
psg_stage1pc_sp4
0.019662921
psg_stage2min_sp3
76.5
psg_stage2min_sp4
96
psg_stage2pc_sp3
0.425
psg_stage2pc_sp4
0.539325843
psg_stage34min_sp3
23
psg_stage34min_sp4
53.5
psg_stage34pc_sp3
0.127777778
psg_stage34pc_sp4
0.300561798
psg_swslfromsol10_10min_sp3
25.5
psg_swslfromsol10_10min_sp4
10.5
psg_swslfromsol3_1p5min_sp3
25.5
psg_swslfromsol3_1p5min_sp4
10.5
psg_totalrecordingtime_sp3
180
psg_totalrecordingtime_sp4
178
psg_totalwakemin_sp3
14
psg_totalwakemin_sp4
10.5
psg_totalwakepc_sp3
0.077777778
psg_totalwakepc_sp4
0.058988764
psg_tst_sp3
166
psg_tst_sp4
167.5
psg_wasofromsol10min_sp3
8
psg_wasofromsol10min_sp4
8
psg_wasofromsol3min_sp3
8
psg_wasofromsol3min_sp4
8
pvt_1overmeanrt
0.002988358
pvt_1overmeanrt_b1
0.003834716
pvt_1overmeanrt_binary
high
pvt_1overmeanrt_changefromb1
-8.46E-04
pvt_1overmedrt
0.003478493
pvt_1overmedrt_b1
0.004123711
pvt_1overmedrt_changefromb1
-6.45E-04
pvt_1overslowestrt
0.001526301
pvt_1overslowestrt_b1
0.002180761
pvt_1overslowestrt_binary
low
pvt_1overslowestrt_changefromb1
-6.54E-04
pvt_anticipated
1.7857142857142858
pvt_anticipations_b1
0
pvt_anticipations_changefromb1
1.7857142857142858
pvt_fastestrt
220.77122857142857
pvt_fastestrt_b1
198.5556
pvt_fastestrt_binary
low
pvt_fastestrt_changefromb1
22.21562857142857
pvt_lapses
8.428571428571429
pvt_lapses_b1
3
pvt_lapses_binary
low
pvt_lapses_changefromb1
5.428571428571429
pvt_logstdrt
2.1905389184205775
pvt_logstdrt_b1
1.8902583375063966
pvt_logstdrt_binary
high
pvt_logstdrt_changefromb1
0.3002805809141799
pvtlapses30
NA
pvtlapses35
LOW35
qiita_sample_type
feces
remlfromsol3min_sp3
4.5
remlfromsol3min_sp4
66.5
remmin_sp3
51.5
remmin_sp4
14.5
rempc_sp3
0.286111111
rempc_sp4
0.081460674
sample name
qiita_sid_10513:10513.62804
sample_type
feces
scientific_name
human gut metagenome
segment_fecal
sleep_loss_1
segment_fecal_2early_mic
sl
segment_fecal_2late_mic
not applicable
segment_fecal_3_mic
sleep_loss_1
segment_fecal_met
sl
segment_fecal_numeric
1
sex
male
shotgun
no
sixteen_s
yes
stage1min_sp3
15
stage1pc_sp3
0.083333333
stage1pc_sp4
0.019662921
stage2pc_sp3
0.425
stage2pc_sp4
0.539325843
stage34min_sp3
23
stroop_congruent_medrtc
625.75
stroop_congruent_medrtc_b1
631.5
stroop_congruent_medrtc_changefromb1
-5.75
stroop_incongruent_medrtc
720.3571428571429
stroop_incongruent_medrtc_b1
655.5
stroop_incongruent_medrtc_changefromb1
64.85714285714286
stroop_inhibitorycontrol
94.60714285714286
stroop_inhibitorycontrol_b1
24
stroop_inhibitorycontrol_binary
low
stroop_inhibitorycontrol_changefromb1
70.60714285714286
stroop_neutral_medrtc
658.75
stroop_neutral_medrtc_b1
658.5
stroop_neutral_medrtc_changefromb1
0.25
stroopincmrtc30
LOW30
stroopincmrtc35
LOW35
vas_alert
47.107142857142854
vas_alert_binary
high
visit
1
vs_ct
15.91731124082663
vs_ct_b1
16.721311475409834
vs_ct_changefromb1
-0.804000235
vs_medrtc
956.7142857142857
vs_medrtc_b1
828
vs_medrtc_changefromb1
128.71428571428572
vs_medrtc_targetabsent
1205.4285714285713
vs_medrtc_targetabsent_b1
1081.5
vs_medrtc_targetabsent_changefromb1
123.92857142857143
vs_medrtc_targetpresent
769.8928571428571
vs_medrtc_targetpresent_b1
654
vs_medrtc_targetpresent_changefromb1
115.89285714285714
vs_missedtargetspc
7.265805789446379
vs_missedtargetspc_b1
8
vs_missedtargetspc_changefromb1
-0.734194211
vs_slopetargetabsent
24.997857142857143
vs_slopetargetabsent_b1
32.775
vs_slopetargetabsent_binary
high
vs_slopetargetabsent_changefromb1
-7.777142857
vs_slopetargetpresent
3.2725
vs_slopetargetpresent_b1
6.33
vs_slopetargetpresent_changefromb1
-3.0575
wakeperiod
3
wasosp330
NA
wasosp335
NA
weight_kg
85.27
weight_unit
kg