uncultured Corynebacterium sp.
This sample represents a binned metagenome assembled from the metagenomic runs SRR14332514, SRR14332515, SRR14332536, SRR14332537, SRR14332561, SRR14332560 of study SRP314237.
INSDC center name
NIH/NHGRI
Submitter Id
SAMPLE_136_bin.2
assembly quality
Many fragments with little to no review of assembly other than reporting of standard assembly statistics
assembly software
metaSPAdes_v3.13.0
binning parameters
--maxbin2 --metabat2 --concoct
binning software
metaWRAP_v1.2.1
broad-scale environmental context
human skin
collection date
not applicable
completeness score
99.25
completeness software
CheckM_v1.1.2
contamination score
0.22
environmental medium
Skin swab
geographic location (country and/or sea)
USA
geographic location (latitude)
not applicable
geographic location (longitude)
not applicable
investigation type
metagenome-assembled genome
isolation_source
human skin metagenome
local environmental context
N
metagenomic source
human skin metagenome
project name
Metagenomic assemblies and bins underlying the Skin Microbial Genome Catalogue
sample derived from
ERS25060473
sample name
SAMPLE_136_bin.2
scientific_name
uncultured Corynebacterium sp.
sequencing method
Illumina NovaSeq 6000
taxonomic identity marker
multi-marker approach