Clostridium sp. CAG:221
This sample represents a Single-Cell Amplified Genome derived from the environmental sample ERS30804966. Cells were isolated using semi-permeable capsules with four-component combinatorial barcoding.
ENA first public
2026-07-28
INSDC center name
DTU-GE
INSDC status
public
Submitter Id
pF_W9_H3aage_SAG
WGA amplification approach
mda based
assembly quality
Multiple fragments where gaps span repetitive regions. Presence of the 23S, 16S, and 5S rRNA genes and at least 18 tRNAs
assembly software
SPAdes --sc --careful --disable-rr --disable-gzip-output
broad-scale environmental context
animal-associated environment
broker name
DTU-GE
collection date
2019
completeness score
91.39
completeness software
CheckM2
contamination score
2.91
environmental medium
feces
geographic location (country and/or sea)
Denmark
geographic location (latitude)
55.786
geographic location (longitude)
12.522
isolation_source
pig feces
local environmental context
pig feces
metagenomic source
pig fecal metagenome
project name
PRJEB120797
sample derived from
ERS30804966
sample name
pF_W9_H3aage_SAG
scientific_name
Clostridium sp. CAG:221
single cell or viral particle lysis approach
combination
sorting technology
other
taxonomic identity marker
GTDB-Tk