Kocuria palustris
This sample represents a binned metagenome assembled from the metagenomic run SRR2005678 of study SRP057859.
INSDC center name
NIH/NHGRI
Submitter Id
SAMPLE_1703_bin.4
assembly quality
Many fragments with little to no review of assembly other than reporting of standard assembly statistics
assembly software
metaSPAdes_v3.13.0
binning parameters
--maxbin2 --metabat2 --concoct
binning software
metaWRAP_v1.2.1
broad-scale environmental context
human skin
collection date
2013-12-17
completeness score
56.9
completeness software
CheckM_v1.1.2
contamination score
0.0
environmental medium
organic_material
geographic location (country and/or sea)
Italy
geographic location (latitude)
46.0667
geographic location (longitude)
11.1167
investigation type
metagenome-assembled genome
isolation_source
human skin metagenome
local environmental context
left olecranon skin area
metagenomic source
human skin metagenome
project name
Metagenomic assemblies and bins underlying the Skin Microbial Genome Catalogue
sample derived from
SRS927176
sample name
SAMPLE_1703_bin.4
scientific_name
Kocuria palustris
sequencing method
Illumina HiSeq 2000
taxonomic identity marker
multi-marker approach