uncultured Cellvibrio sp.
This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR25737861 of study SRP456588.
ENA first public
2025-07-28
INSDC center name
EMG
INSDC status
public
Submitter Id
SRR25737861_concoct_37
assembly quality
Many fragments with little to no review of assembly other than reporting of standard assembly statistics
assembly software
megahit_v1.2.9
binning parameters
default
binning software
MGnify-genomes-generation-pipeline_v1.0.0
broad-scale environmental context
soil
broker name
EBI-EMG
collection date
2023-03-15
completeness score
51.27
completeness software
CheckM2_v1.0.1
contamination score
4.93
environmental medium
tomato
geographic location (country and/or sea)
India
geographic location (latitude)
29.53300000
geographic location (longitude)
75.01700000
investigation type
metagenome-assembled genome
isolation_source
rhizosphere metagenome
local environmental context
rhizosphere
metagenomic source
rhizosphere metagenome
project name
Combined effect of microplastics and fungicides on the growth of tomato and metagenome of rhizosphere soil.
sample derived from
SAMN36922550
sample name
SRR25737861_concoct_37
scientific_name
uncultured Cellvibrio sp.
sequencing method
HiSeq X Ten
taxonomic identity marker
multi-marker approach