Staphylococcus capitis
This sample represents a binned metagenome assembled from the metagenomic run SRR1631109 of study SRP002480.
INSDC center name
NIH/NHGRI
Submitter Id
SAMPLE_1077_bin.2
assembly quality
Many fragments with little to no review of assembly other than reporting of standard assembly statistics
assembly software
metaSPAdes_v3.13.0
binning parameters
--maxbin2 --metabat2 --concoct
binning software
metaWRAP_v1.2.1
broad-scale environmental context
human skin
collection date
2013-01-16
completeness score
98.97
completeness software
CheckM_v1.1.2
contamination score
0.72
environmental medium
Ss
geographic location (country and/or sea)
USA
geographic location (latitude)
38.984652
geographic location (longitude)
-77.094709
investigation type
metagenome-assembled genome
isolation_source
human skin metagenome
local environmental context
Ic-R
metagenomic source
human skin metagenome
project name
Metagenomic assemblies and bins underlying the Skin Microbial Genome Catalogue
sample derived from
SRS731434
sample name
SAMPLE_1077_bin.2
scientific_name
Staphylococcus capitis
sequencing method
Illumina HiSeq 2000
taxonomic identity marker
multi-marker approach