human gut metagenome
stool sample 15NAVY02_V2
ENA first public
2025-11-21
INSDC center name
UCSDMI
INSDC status
public
Submitter Id
qiita_sid_10513:10513.37438
add_attempted
22.733333333333334
add_attempted_b1
not applicable
add_attempted_changefromb1
not applicable
add_corr30
NA
add_corr35
NA
add_correct
22.066666666666666
add_correct_b1
not applicable
add_correct_changefromb1
not applicable
add_percent
96.88740344622697
add_percent_b1
not applicable
add_percent_changefromb1
not applicable
age
25
age_units
years
anonymized_name
37438_fecal
bmi
21
collection date
2015-12-10
collection_time
7:50
collection_timesincesp1wake
0.3
collection_timestamp
2015-12-10 07:50
condition
baseline
condition_by_visit
baseline_visit2
condition_numeric
1
conjvstargab30
LOW30
conjvstargab35
LOW35
country
USA
cptcort30
LOW30
cptcort35
LOW35
cytokinecluster
1
dna_extracted
TRUE
elevation
1629
empo_1
Host-associated
empo_2
Host-associated (non-saline)
empo_3
Animal (non-saline)
empo_4
Animal distal gut (non-saline)
env_biome
urban biome
env_feature
human-associated habitat
env_material
fecal material
env_package
human-gut
fast_duration_hrs
not provided
fecalmicrobiomebetadiv30
LOW30
fecalmicrobiomebetadiv35
LOW35
geo_loc_name
USA:CO:Boulder
geographic location (country and/or sea)
USA
height
170.4
height_unit
cm
hemolysed
not applicable
host scientific name
Homo sapiens
host_age
25
host_age_units
years
host_body_habitat
UBERON:feces
host_body_mass_index
21
host_body_product
UBERON:feces
host_body_site
UBERON:feces
host_common_name
human
host_height
170.4
host_height_units
cm
host_life_stage
adult
host_subject_id
15NAVY02
host_subject_id_letter
a
host_taxid
9606
host_weight
61
host_weight_units
kg
kss_beginning
4.333333333333333
kss_beginning_b1
not applicable
kss_beginning_changefromb1
not applicable
kss_end
4.8
kss_end_b1
not applicable
kss_end_changefromb1
not applicable
kss_middle
4.733333333333333
kss_middle_b1
not applicable
kss_middle_changefromb1
not applicable
latitude
40.1
longitude
-107.2
metabolomics
yes
missedtargetspc_changefromb1
not collected
ms_experiment
01
ms_filename
15navy02.v2.20151210.mzxml
ms_plate_position
2_a11
ms_runorder
119
mwt30
NA
mwt35
NA
mwt_sol1stepochsleep
14.933333333333334
mwt_sol1stepochsleep_12
not collected
mwt_sol1stepochsleep_8
not collected
mwt_sol1stepochsleep_binary
high
mwt_sol1stepochstage2
not collected
mwtmin
NA
nas_beginning
169.270625
nas_beginning_b1
not applicable
nas_beginning_changefromb1
not applicable
nas_end
181.428125
nas_end_b1
not applicable
nas_end_changefromb1
not applicable
pas_beginning
599.9193750000001
pas_beginning_b1
not applicable
pas_beginning_changefromb1
not applicable
pas_end
596.1168750000002
pas_end_b1
not applicable
pas_end_changefromb1
not applicable
physical_specimen_location
CU Boulder_Wright Lab
physical_specimen_remaining
TRUE
plasma_sample
not applicable
plasma_sample_1_10
not applicable
plasma_sample_reltime
not applicable
psg_finalstageawakening_sp3
2
psg_finalstageawakening_sp4
2
psg_remlfromsol10min_sp3
2.5
psg_remlfromsol10min_sp4
73.5
psg_remlfromsol3min_sp3
2.5
psg_remlfromsol3min_sp4
73.5
psg_remmin_sp3
48
psg_remmin_sp4
34.5
psg_rempc_sp3
0.268907563
psg_rempc_sp4
0.19
psg_se_sp3
0.957983193
psg_se_sp4
0.97
psg_sol10_10min_sp3
3
psg_sol10_10min_sp4
2
psg_sol3_1p5min_sp3
3
psg_sol3_1p5min_sp4
2
psg_stage1min_sp3
6
psg_stage1min_sp4
10.5
psg_stage1pc_sp3
0.033613445
psg_stage1pc_sp4
0.06
psg_stage2min_sp3
88
psg_stage2min_sp4
89
psg_stage2pc_sp3
0.492997199
psg_stage2pc_sp4
0.49
psg_stage34min_sp3
29
psg_stage34min_sp4
40.5
psg_stage34pc_sp3
0.162464986
psg_stage34pc_sp4
0.22
psg_swslfromsol10_10min_sp3
34
psg_swslfromsol10_10min_sp4
16
psg_swslfromsol3_1p5min_sp3
34
psg_swslfromsol3_1p5min_sp4
16
psg_totalrecordingtime_sp3
178.5
psg_totalrecordingtime_sp4
180.5
psg_totalwakemin_sp3
7.5
psg_totalwakemin_sp4
6
psg_totalwakepc_sp3
0.042016807
psg_totalwakepc_sp4
0.03
psg_tst_sp3
171
psg_tst_sp4
174.5
psg_wasofromsol10min_sp3
4.5
psg_wasofromsol10min_sp4
4
psg_wasofromsol3min_sp3
4.5
psg_wasofromsol3min_sp4
4
pvt_1overmeanrt
0.002793803
pvt_1overmeanrt_b1
not applicable
pvt_1overmeanrt_binary
low
pvt_1overmeanrt_changefromb1
not applicable
pvt_1overmedrt
0.003137019
pvt_1overmedrt_b1
not applicable
pvt_1overmedrt_changefromb1
not applicable
pvt_1overslowestrt
0.001473857
pvt_1overslowestrt_b1
not applicable
pvt_1overslowestrt_binary
low
pvt_1overslowestrt_changefromb1
not applicable
pvt_anticipated
1.4
pvt_anticipations_b1
not applicable
pvt_anticipations_changefromb1
not applicable
pvt_fastestrt
218.02408000000003
pvt_fastestrt_b1
not applicable
pvt_fastestrt_binary
low
pvt_fastestrt_changefromb1
not applicable
pvt_lapses
10.866666666666667
pvt_lapses_b1
not applicable
pvt_lapses_binary
high
pvt_lapses_changefromb1
not applicable
pvt_logstdrt
2.1602053564841954
pvt_logstdrt_b1
not applicable
pvt_logstdrt_binary
high
pvt_logstdrt_changefromb1
not applicable
pvtlapses30
NA
pvtlapses35
NA
qiita_sample_type
feces
remlfromsol3min_sp3
2.5
remlfromsol3min_sp4
73.5
remmin_sp3
48
remmin_sp4
34.5
rempc_sp3
0.268907563
rempc_sp4
0.19
sample name
qiita_sid_10513:10513.37438
sample_type
feces
scientific_name
human gut metagenome
segment_fecal
bl
segment_fecal_2early_mic
bl
segment_fecal_2late_mic
bl
segment_fecal_3_mic
bl
segment_fecal_met
bl
segment_fecal_numeric
0
segment_fecal_shotgun
bl
sex
male
shotgun
yes
sixteen_s
yes
stage1min_sp3
6
stage1pc_sp3
0.033613445
stage1pc_sp4
0.06
stage2pc_sp3
0.492997199
stage2pc_sp4
0.49
stage34min_sp3
29
stroop_congruent_medrtc
549.8
stroop_congruent_medrtc_b1
not applicable
stroop_congruent_medrtc_changefromb1
not applicable
stroop_incongruent_medrtc
613.1666666666666
stroop_incongruent_medrtc_b1
not applicable
stroop_incongruent_medrtc_changefromb1
not applicable
stroop_inhibitorycontrol
63.36666666666667
stroop_inhibitorycontrol_b1
not applicable
stroop_inhibitorycontrol_binary
low
stroop_inhibitorycontrol_changefromb1
not applicable
stroop_neutral_medrtc
609.3
stroop_neutral_medrtc_b1
not applicable
stroop_neutral_medrtc_changefromb1
not applicable
stroopincmrtc30
LOW30
stroopincmrtc35
LOW35
vas_alert
70.57933333333334
vas_alert_binary
high
visit
2
vs_ct
19.23538559498148
vs_ct_b1
nan
vs_ct_changefromb1
nan
vs_medrtc
477.53333333333336
vs_medrtc_b1
nan
vs_medrtc_changefromb1
nan
vs_medrtc_targetabsent
514.6666666666666
vs_medrtc_targetabsent_b1
nan
vs_medrtc_targetabsent_changefromb1
nan
vs_medrtc_targetpresent
441.3666666666667
vs_medrtc_targetpresent_b1
nan
vs_medrtc_targetpresent_changefromb1
nan
vs_missedtargetspc
8.023001002423289
vs_missedtargetspc_b1
nan
vs_missedtargetspc_changefromb1
nan
vs_slopetargetabsent
2.778
vs_slopetargetabsent_b1
nan
vs_slopetargetabsent_binary
low
vs_slopetargetabsent_changefromb1
nan
vs_slopetargetpresent
1.5946666666666667
vs_slopetargetpresent_b1
nan
vs_slopetargetpresent_changefromb1
nan
wasosp330
LOW30
wasosp335
LOW35
weight_kg
61
weight_unit
kg