uncultured Francisella sp.
This sample represents a binned metagenome assembled from the metagenomic run SRR14198837 of study SRP314237.
INSDC center name
NIH/NHGRI
Submitter Id
SAMPLE_883_bin.5
assembly quality
Many fragments with little to no review of assembly other than reporting of standard assembly statistics
assembly software
metaSPAdes_v3.13.0
binning parameters
--maxbin2 --metabat2 --concoct
binning software
metaWRAP_v1.2.1
broad-scale environmental context
human skin
collection date
2018-12
completeness score
52.64
completeness software
CheckM_v1.1.2
contamination score
2.63
environmental medium
swab
geographic location (country and/or sea)
USA
geographic location (latitude)
38.999838
geographic location (longitude)
-77.106017
investigation type
metagenome-assembled genome
isolation_source
human skin metagenome
local environmental context
Ac
metagenomic source
human skin metagenome
project name
Metagenomic assemblies and bins underlying the Skin Microbial Genome Catalogue
sample derived from
SRS8671947
sample name
SAMPLE_883_bin.5
scientific_name
uncultured Francisella sp.
sequencing method
Illumina NovaSeq 6000
taxonomic identity marker
multi-marker approach