human gut metagenome
stool sample 16NAVY15_V2
ENA first public
2025-11-21
INSDC center name
UCSDMI
INSDC status
public
Submitter Id
qiita_sid_10513:10513.62790
add_attempted
20.2
add_attempted_b1
23
add_attempted_changefromb1
-2.8
add_corr30
LOW30
add_corr35
LOW35
add_correct
19.8
add_correct_b1
23
add_correct_changefromb1
-3.2
add_percent
98.19856735263764
add_percent_b1
100
add_percent_changefromb1
1.8014326473623612
age
22
age_units
years
anonymized_name
62790_fecal
bmi
22.44
collection date
2016-12-02
collection_time
22:52
collection_timesincesp1wake
14.53
collection_timestamp
2016-12-02 22:52
condition
baseline
condition_by_visit
baseline_visit2
condition_numeric
1
conjvstargab30
NA
conjvstargab35
NA
country
USA
cptcort30
NA
cptcort35
NA
cytokinecluster
1
dna_extracted
TRUE
elevation
1629
empo_1
Host-associated
empo_2
Host-associated (non-saline)
empo_3
Animal (non-saline)
empo_4
Animal distal gut (non-saline)
env_biome
urban biome
env_feature
human-associated habitat
env_material
fecal material
env_package
human-gut
fast_duration_hrs
not provided
fecalmicrobiomebetadiv30
NA
fecalmicrobiomebetadiv35
HIGH35
fronzenimmediately
yes
geo_loc_name
USA:CO:Boulder
geographic location (country and/or sea)
USA
height
179.5
height_unit
cm
hemolysed
not applicable
host scientific name
Homo sapiens
host_age
22
host_age_units
years
host_body_habitat
UBERON:feces
host_body_mass_index
22.44
host_body_product
UBERON:feces
host_body_site
UBERON:feces
host_common_name
human
host_height
179.5
host_height_units
cm
host_life_stage
adult
host_subject_id
16NAVY15
host_subject_id_letter
t
host_taxid
9606
host_weight
72.3
host_weight_units
kg
kss_beginning
6.466666666666667
kss_beginning_b1
3
kss_beginning_changefromb1
3.466666666666667
kss_end
7
kss_end_b1
3
kss_end_changefromb1
4
kss_middle
6.666666666666667
kss_middle_b1
3
kss_middle_changefromb1
3.6666666666666665
latitude
40.1
longitude
-107.2
metabolomics
yes
missedtargetspc_changefromb1
not collected
ms_experiment
01
ms_filename
16navy15.v2.20161202.mzxml
ms_plate_position
1_c02
ms_runorder
30
mwt30
LOW30
mwt35
LOW35
mwt_sol1stepochsleep
7.392857142857143
mwt_sol1stepochsleep_12
morethan12min
mwt_sol1stepochsleep_8
morethan8min
mwt_sol1stepochsleep_binary
low
mwt_sol1stepochstage2
20
nas_beginning
23.579375
nas_beginning_b1
17.71875
nas_beginning_changefromb1
5.860625000000001
nas_end
38.613749999999996
nas_end_b1
15.525000000000002
nas_end_changefromb1
23.08875
pas_beginning
114.66249999999998
pas_beginning_b1
176.27812499999993
pas_beginning_changefromb1
-61.615625
pas_end
115.87375
pas_end_b1
216.50625000000002
pas_end_changefromb1
-100.6325
physical_specimen_location
CU Boulder_Wright Lab
physical_specimen_remaining
TRUE
plasma_sample
not applicable
plasma_sample_1_10
not applicable
plasma_sample_reltime
not applicable
psg_finalstageawakening_sp3
2
psg_finalstageawakening_sp4
2
psg_remlfromsol10min_sp3
-20
psg_remlfromsol10min_sp4
101
psg_remlfromsol3min_sp3
3
psg_remlfromsol3min_sp4
120.5
psg_remmin_sp3
21.5
psg_remmin_sp4
12
psg_rempc_sp3
0.119444444
psg_rempc_sp4
0.07
psg_se_sp3
0.922222222
psg_se_sp4
0.91
psg_sol10_10min_sp3
29
psg_sol10_10min_sp4
27
psg_sol3_1p5min_sp3
6
psg_sol3_1p5min_sp4
7.5
psg_stage1min_sp3
21
psg_stage1min_sp4
20.5
psg_stage1pc_sp3
0.116666667
psg_stage1pc_sp4
0.11
psg_stage2min_sp3
95
psg_stage2min_sp4
87
psg_stage2pc_sp3
0.527777778
psg_stage2pc_sp4
0.48
psg_stage34min_sp3
28.5
psg_stage34min_sp4
44.5
psg_stage34pc_sp3
0.158333333
psg_stage34pc_sp4
0.25
psg_swslfromsol10_10min_sp3
12
psg_swslfromsol10_10min_sp4
9.5
psg_swslfromsol3_1p5min_sp3
35
psg_swslfromsol3_1p5min_sp4
29
psg_totalrecordingtime_sp3
180
psg_totalrecordingtime_sp4
180
psg_totalwakemin_sp3
14
psg_totalwakemin_sp4
16
psg_totalwakepc_sp3
0.077777778
psg_totalwakepc_sp4
0.09
psg_tst_sp3
166
psg_tst_sp4
164
psg_wasofromsol10min_sp3
4.5
psg_wasofromsol10min_sp4
5
psg_wasofromsol3min_sp3
8
psg_wasofromsol3min_sp4
8.5
pvt_1overmeanrt
0.002419653
pvt_1overmeanrt_b1
0.003560099
pvt_1overmeanrt_binary
low
pvt_1overmeanrt_changefromb1
-0.001140446
pvt_1overmedrt
0.003153105
pvt_1overmedrt_b1
0.00390625
pvt_1overmedrt_changefromb1
-7.53E-04
pvt_1overslowestrt
0.001194452
pvt_1overslowestrt_b1
0.002225684
pvt_1overslowestrt_binary
low
pvt_1overslowestrt_changefromb1
-0.001031233
pvt_anticipated
5
pvt_anticipations_b1
0
pvt_anticipations_changefromb1
5
pvt_fastestrt
223.96222666666665
pvt_fastestrt_b1
201.5
pvt_fastestrt_binary
low
pvt_fastestrt_changefromb1
22.462226666666666
pvt_lapses
14.133333333333333
pvt_lapses_b1
1
pvt_lapses_binary
high
pvt_lapses_changefromb1
13.133333333333333
pvt_logstdrt
2.457924540469197
pvt_logstdrt_b1
1.8805855278056283
pvt_logstdrt_binary
high
pvt_logstdrt_changefromb1
0.5773390126635692
pvtlapses30
NA
pvtlapses35
NA
qiita_sample_type
feces
remlfromsol3min_sp3
3
remlfromsol3min_sp4
120.5
remmin_sp3
21.5
remmin_sp4
12
rempc_sp3
0.119444444
rempc_sp4
0.07
sample name
qiita_sid_10513:10513.62790
sample_type
feces
scientific_name
human gut metagenome
segment_fecal
bl
segment_fecal_2early_mic
bl
segment_fecal_2late_mic
bl
segment_fecal_3_mic
bl
segment_fecal_met
bl
segment_fecal_numeric
0
segment_fecal_shotgun
bl
sex
male
shotgun
yes
sixteen_s
yes
stage1min_sp3
21
stage1pc_sp3
0.116666667
stage1pc_sp4
0.11
stage2pc_sp3
0.527777778
stage2pc_sp4
0.48
stage34min_sp3
28.5
stroop_congruent_medrtc
not applicable
stroop_congruent_medrtc_b1
not applicable
stroop_congruent_medrtc_changefromb1
not applicable
stroop_incongruent_medrtc
not applicable
stroop_incongruent_medrtc_b1
not applicable
stroop_incongruent_medrtc_changefromb1
not applicable
stroop_inhibitorycontrol
not applicable
stroop_inhibitorycontrol_b1
not applicable
stroop_inhibitorycontrol_binary
NA
stroop_inhibitorycontrol_changefromb1
not applicable
stroop_neutral_medrtc
not applicable
stroop_neutral_medrtc_b1
not applicable
stroop_neutral_medrtc_changefromb1
not applicable
stroopincmrtc30
NA
stroopincmrtc35
NA
vas_alert
33.374
vas_alert_binary
low
visit
2
vs_ct
not applicable
vs_ct_b1
not applicable
vs_ct_changefromb1
not applicable
vs_medrtc
not applicable
vs_medrtc_b1
not applicable
vs_medrtc_changefromb1
not applicable
vs_medrtc_targetabsent
not applicable
vs_medrtc_targetabsent_b1
not applicable
vs_medrtc_targetabsent_changefromb1
not applicable
vs_medrtc_targetpresent
not applicable
vs_medrtc_targetpresent_b1
not applicable
vs_medrtc_targetpresent_changefromb1
not applicable
vs_missedtargetspc
not applicable
vs_missedtargetspc_b1
not applicable
vs_missedtargetspc_changefromb1
not applicable
vs_slopetargetabsent
not applicable
vs_slopetargetabsent_b1
not applicable
vs_slopetargetabsent_binary
NA
vs_slopetargetabsent_changefromb1
not applicable
vs_slopetargetpresent
not applicable
vs_slopetargetpresent_b1
not applicable
vs_slopetargetpresent_changefromb1
not applicable
wakeperiod
0
wasosp330
NA
wasosp335
HIGH35
weight_kg
72.3
weight_unit
kg