human gut metagenome
stool sample 16NAVY06_V1
ENA first public
2025-11-21
INSDC center name
UCSDMI
INSDC status
public
Submitter Id
qiita_sid_10513:10513.40769
add_attempted
33.266666666666666
add_attempted_b1
31
add_attempted_changefromb1
2.2666666666666666
add_corr30
HIGH30
add_corr35
HIGH35
add_correct
31.866666666666667
add_correct_b1
27
add_correct_changefromb1
4.866666666666666
add_percent
95.78438026113548
add_percent_b1
87.09677419354838
add_percent_changefromb1
-8.687606068
age
21
age_units
years
anonymized_name
40769_fecal
bmi
22.6
collection date
2016-02-06
collection_time
12:52
collection_timesincesp1wake
52.92
collection_timestamp
2016-02-06 12:52
condition
scd
condition_by_visit
scd_visit1
condition_numeric
2
conjvstargab30
LOW30
conjvstargab35
LOW35
country
USA
cptcort30
NA
cptcort35
NA
cytokinecluster
3
dna_extracted
TRUE
elevation
1629
empo_1
Host-associated
empo_2
Host-associated (non-saline)
empo_3
Animal (non-saline)
empo_4
Animal distal gut (non-saline)
env_biome
urban biome
env_feature
human-associated habitat
env_material
fecal material
env_package
human-gut
fast_duration_hrs
not provided
fecalmicrobiomebetadiv30
HIGH30
fecalmicrobiomebetadiv35
HIGH35
geo_loc_name
USA:CO:Boulder
geographic location (country and/or sea)
USA
height
161
height_unit
cm
hemolysed
not applicable
host scientific name
Homo sapiens
host_age
21
host_age_units
years
host_body_habitat
UBERON:feces
host_body_mass_index
22.6
host_body_product
UBERON:feces
host_body_site
UBERON:feces
host_common_name
human
host_height
161
host_height_units
cm
host_life_stage
adult
host_subject_id
16NAVY06
host_subject_id_letter
e
host_taxid
9606
host_weight
58.7
host_weight_units
kg
kss_beginning
5.133333333333334
kss_beginning_b1
4
kss_beginning_changefromb1
1.1333333333333333
kss_end
4.866666666666666
kss_end_b1
3
kss_end_changefromb1
1.8666666666666667
kss_middle
5.733333333333333
kss_middle_b1
4
kss_middle_changefromb1
1.7333333333333334
latitude
40.1
longitude
-107.2
metabolomics
yes
ms_experiment
01
ms_filename
16navy06.v1.20160206.mzxml
ms_plate_position
2_a08
ms_runorder
116
mwt30
NA
mwt35
NA
mwt_sol1stepochsleep
11.7
mwt_sol1stepochsleep_binary
low
mwtmin
NA
nas_beginning
69.08187500000001
nas_beginning_b1
26.296875000000007
nas_beginning_changefromb1
42.785000000000004
nas_end
113.135625
nas_end_b1
21.13125
nas_end_changefromb1
92.004375
pas_beginning
336.47625
pas_beginning_b1
661.9312500000001
pas_beginning_changefromb1
-273.966875
pas_end
333.91749999999996
pas_end_b1
596.53125
pas_end_changefromb1
-218.98625
physical_specimen_location
CU Boulder_Wright Lab
physical_specimen_remaining
TRUE
plasma_sample
not applicable
plasma_sample_1_10
not applicable
plasma_sample_reltime
not applicable
psg_finalstageawakening_sp3
r
psg_finalstageawakening_sp4
2
psg_remlfromsol10min_sp3
69
psg_remlfromsol10min_sp4
67
psg_remlfromsol3min_sp3
69
psg_remlfromsol3min_sp4
67
psg_remmin_sp3
30
psg_remmin_sp4
38
psg_rempc_sp3
0.168067227
psg_rempc_sp4
0.21
psg_se_sp3
0.904761905
psg_se_sp4
0.95
psg_sol10_10min_sp3
12.5
psg_sol10_10min_sp4
5.5
psg_sol3_1p5min_sp3
12.5
psg_sol3_1p5min_sp4
5.5
psg_stage1min_sp3
7.5
psg_stage1min_sp4
6
psg_stage1pc_sp3
0.042016807
psg_stage1pc_sp4
0.03
psg_stage2min_sp3
101.5
psg_stage2min_sp4
68
psg_stage2pc_sp3
0.568627451
psg_stage2pc_sp4
0.38
psg_stage34min_sp3
22.5
psg_stage34min_sp4
58
psg_stage34pc_sp3
0.12605042
psg_stage34pc_sp4
0.32
psg_swslfromsol10_10min_sp3
37
psg_swslfromsol10_10min_sp4
14.5
psg_swslfromsol3_1p5min_sp3
37
psg_swslfromsol3_1p5min_sp4
14.5
psg_totalrecordingtime_sp3
178.5
psg_totalrecordingtime_sp4
178.5
psg_totalwakemin_sp3
17
psg_totalwakemin_sp4
8.5
psg_totalwakepc_sp3
0.095238095
psg_totalwakepc_sp4
0.05
psg_tst_sp3
161.5
psg_tst_sp4
170
psg_wasofromsol10min_sp3
4.5
psg_wasofromsol10min_sp4
3.5
psg_wasofromsol3min_sp3
4.5
psg_wasofromsol3min_sp4
3.5
pvt_1overmeanrt
0.003277341
pvt_1overmeanrt_b1
0.003734504
pvt_1overmeanrt_binary
high
pvt_1overmeanrt_changefromb1
-4.57E-04
pvt_1overmedrt
0.003532191
pvt_1overmedrt_b1
0.003937008
pvt_1overmedrt_changefromb1
-4.05E-04
pvt_1overslowestrt
0.001987997
pvt_1overslowestrt_b1
0.002650177
pvt_1overslowestrt_binary
high
pvt_1overslowestrt_changefromb1
-6.62E-04
pvt_anticipated
0.5333333333333333
pvt_anticipations_b1
2
pvt_anticipations_changefromb1
-1.466666667
pvt_fastestrt
218.94351999999998
pvt_fastestrt_b1
204.33330000000007
pvt_fastestrt_binary
low
pvt_fastestrt_changefromb1
14.610219999999991
pvt_lapses
3.2666666666666666
pvt_lapses_b1
0
pvt_lapses_binary
low
pvt_lapses_changefromb1
3.2666666666666666
pvt_logstdrt
1.9506397475103912
pvt_logstdrt_b1
1.696767768685631
pvt_logstdrt_binary
low
pvt_logstdrt_changefromb1
0.2538719788247603
pvtlapses30
LOW30
pvtlapses35
LOW35
qiita_sample_type
feces
remlfromsol3min_sp3
69
remlfromsol3min_sp4
67
remmin_sp3
30
remmin_sp4
38
rempc_sp3
0.168067227
rempc_sp4
0.21
sample name
qiita_sid_10513:10513.40769
sample_type
feces
scientific_name
human gut metagenome
segment_fecal
sleep_loss_1
segment_fecal_2early_mic
sl
segment_fecal_2late_mic
not applicable
segment_fecal_3_mic
sleep_loss_1
segment_fecal_met
sl
segment_fecal_numeric
1
sex
female
shotgun
no
sixteen_s
yes
stage1min_sp3
7.5
stage1pc_sp3
0.042016807
stage1pc_sp4
0.03
stage2pc_sp3
0.568627451
stage2pc_sp4
0.38
stage34min_sp3
22.5
stroop_congruent_medrtc
497.43333333333334
stroop_congruent_medrtc_b1
520
stroop_congruent_medrtc_changefromb1
-22.56666667
stroop_incongruent_medrtc
569.9
stroop_incongruent_medrtc_b1
578
stroop_incongruent_medrtc_changefromb1
-8.1
stroop_inhibitorycontrol
72.46666666666667
stroop_inhibitorycontrol_b1
58
stroop_inhibitorycontrol_binary
low
stroop_inhibitorycontrol_changefromb1
14.466666666666667
stroop_neutral_medrtc
519.5666666666667
stroop_neutral_medrtc_b1
504
stroop_neutral_medrtc_changefromb1
15.566666666666666
stroopincmrtc30
LOW30
stroopincmrtc35
LOW35
vas_alert
48.994666666666674
vas_alert_binary
high
visit
1
vs_ct
19.52211279662296
vs_ct_b1
18.445229681978798
vs_ct_changefromb1
1.0768831146441609
vs_medrtc
494.46666666666664
vs_medrtc_b1
726
vs_medrtc_changefromb1
-231.5333333
vs_medrtc_targetabsent
535
vs_medrtc_targetabsent_b1
817
vs_medrtc_targetabsent_changefromb1
-282
vs_medrtc_targetpresent
457.1666666666667
vs_medrtc_targetpresent_b1
490
vs_medrtc_targetpresent_changefromb1
-32.83333333
vs_missedtargetspc
7.172965839857607
vs_missedtargetspc_b1
4.166666666666666
vs_missedtargetspc_changefromb1
3.0062991731909414
vs_slopetargetabsent
3.8603333333333336
vs_slopetargetabsent_b1
17.36
vs_slopetargetabsent_binary
low
vs_slopetargetabsent_changefromb1
-13.49966667
vs_slopetargetpresent
1.8496666666666668
vs_slopetargetpresent_b1
11.63
vs_slopetargetpresent_changefromb1
-9.780333333
wasosp330
LOW30
wasosp335
LOW35
weight_kg
58.7
weight_unit
kg