Facklamia languida
This sample represents a binned metagenome assembled from the metagenomic runs SRR1633159, SRR1633160, SRR1633161, SRR1633162, SRR1633163, SRR1633164, SRR1633165, SRR3189145, SRR3189146, SRR3189147, SRR3189148, SRR3189149, SRR3191602 of study SRP002480.
INSDC center name
NIH/NHGRI
Submitter Id
SAMPLE_192_bin.3
assembly quality
Many fragments with little to no review of assembly other than reporting of standard assembly statistics
assembly software
metaSPAdes_v3.13.0
binning parameters
--maxbin2 --metabat2 --concoct
binning software
metaWRAP_v1.2.1
broad-scale environmental context
human skin
collection date
not applicable
completeness score
54.86
completeness software
CheckM_v1.1.2
contamination score
1.53
environmental medium
Cut
geographic location (country and/or sea)
USA
geographic location (latitude)
not applicable
geographic location (longitude)
not applicable
investigation type
metagenome-assembled genome
isolation_source
human skin metagenome
local environmental context
Tn-R
metagenomic source
human skin metagenome
project name
Metagenomic assemblies and bins underlying the Skin Microbial Genome Catalogue
sample derived from
ERS25060525
sample name
SAMPLE_192_bin.3
scientific_name
Facklamia languida
sequencing method
Illumina HiSeq 2000
taxonomic identity marker
multi-marker approach