mouse gut metagenome
mouse fecal sample for M. vaccae shift work western diet study
ENA first public
2026-06-05
INSDC center name
UCSDMI
INSDC status
public
Submitter Id
qiita_sid_16496:16496.TP.4.87
code
MV CD CDR
cohort
3
collection date
2023-02-13
collection_date
2023-02-13
collection_timestamp
2023-02-13
country
USA
diet
CD
dna_extracted
TRUE
dna_extracted_date
8/11/23 0:00
elevation
1655
empo_1
Host-associated
empo_2
Host-associated (non-saline)
empo_3
Animal (non-saline)
empo_4
Animal distal gut (non-saline)
env_biome
urban biome
env_feature
animal-associated habitat
env_material
fecal material
env_package
host-associated
experimenter
LMD, LWD
geo_loc_name
USA:CO:Boulder
geographic location (country and/or sea)
USA
host_age
133
host_age_units
days
host_body_habitat
UBERON:feces
host_body_mass_index
not applicable
host_body_product
UBERON:feces
host_body_site
UBERON:feces
host_common_name
mouse
host_height
not applicable
host_height_units
cm
host_life_stage
adult
host_scientific_name
Mus musculus
host_subject_id
87
host_taxid
10090
host_weight
24
host_weight_units
g
is_control
FALSE
latitude
40.026834
light_dark
CDR
longitude
-105.245964
mouse_id
87
mouse_number
87
mouse_strain
C57/BL6N
physical_specimen_location
CU Boulder
physical_specimen_remaining
TRUE
qiita_sample_type
feces
room
245C
sample name
qiita_sid_16496:16496.TP.4.87
sample_type
feces
scientific_name
mouse gut metagenome
sex
female
time_point
4
treatment
M. vaccae ATCC 15483