uncultured Bacillota bacterium
This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run ERR14205378 of study ERP157309.
ENA first public
2026-03-01
INSDC center name
EMG
INSDC status
public
Submitter Id
ERR14205378_bin_39327
assembly quality
Many fragments with little to no review of assembly other than reporting of standard assembly statistics
assembly software
metaspades_v3.15.5
binning parameters
default
binning software
MGnify-genomes-generation-pipeline_v2.0.0
broad-scale environmental context
human
broker name
EBI-EMG
collection date
2019
completeness score
97.38
completeness software
CheckM2_v1.0.1
contamination score
0.63
environmental medium
intestine
geographic location (country and/or sea)
Italy
geographic location (latitude)
missing: third party data
geographic location (longitude)
missing: third party data
investigation type
metagenome-assembled genome
isolation_source
human gut metagenome
local environmental context
digestive system
metagenomic source
human gut metagenome
project name
Shotgun metagenomic stool samples from control, adenoma and CRC patients from hospitals in Prague and Plzen, Czech Republic. This cohort was established as part of the ONCOBIOME consortium in order to study the characteristics of the microbiome-CRC link in the different phases of the adenoma-carcinoma sequences, and their differentiation from healthy controls.
sample derived from
SAMEA115285002
sample name
ERR14205378_bin_39327
scientific_name
uncultured Bacillota bacterium
sequencing method
unspecified
taxonomic identity marker
multi-marker approach