human gut metagenome
stool sample 18NAVY28_V1
ENA first public
2025-11-21
INSDC center name
UCSDMI
INSDC status
public
Submitter Id
qiita_sid_10513:10513.66138
add_attempted
28.4
add_attempted_b1
29
add_attempted_changefromb1
-0.6
add_corr30
HIGH30
add_corr35
HIGH35
add_correct
27.733333333333334
add_correct_b1
27
add_correct_changefromb1
0.7333333333333333
add_percent
97.21908378624458
add_percent_b1
93.10344827586206
add_percent_changefromb1
-4.11563551
age
23
age_units
years
anonymized_name
66138_fecal
bmi
23.22
collection date
2018-03-25
collection_time
5:45
collection_timesincesp1wake
47.67
collection_timestamp
2018-03-25 05:45
condition
scd
condition_by_visit
scd_visit1
condition_numeric
2
conjvstargab30
NA
conjvstargab35
LOW35
country
USA
cptcort30
LOW30
cptcort35
LOW35
cytokinecluster
1
dna_extracted
TRUE
elevation
1629
empo_1
Host-associated
empo_2
Host-associated (non-saline)
empo_3
Animal (non-saline)
empo_4
Animal distal gut (non-saline)
env_biome
urban biome
env_feature
human-associated habitat
env_material
fecal material
env_package
human-gut
fast_duration_hrs
not provided
fecalmicrobiomebetadiv30
LOW30
fecalmicrobiomebetadiv35
LOW35
fronzenimmediately
yes
geo_loc_name
USA:CO:Boulder
geographic location (country and/or sea)
USA
height
180.4
height_unit
cm
hemolysed
not applicable
host scientific name
Homo sapiens
host_age
23
host_age_units
years
host_body_habitat
UBERON:feces
host_body_mass_index
23.22
host_body_product
UBERON:feces
host_body_site
UBERON:feces
host_common_name
human
host_height
180.4
host_height_units
cm
host_life_stage
adult
host_subject_id
18NAVY28
host_subject_id_letter
q
host_taxid
9606
host_weight
75.57
host_weight_units
kg
kss_beginning
6.666666666666667
kss_beginning_b1
5
kss_beginning_changefromb1
1.6666666666666667
kss_end
7.6
kss_end_b1
6
kss_end_changefromb1
1.6
kss_middle
7.066666666666666
kss_middle_b1
6
kss_middle_changefromb1
1.0666666666666667
latitude
40.1
longitude
-107.2
metabolomics
yes
ms_experiment
01
ms_filename
18navy28.v1.20180325.mzxml
ms_plate_position
1_a06
ms_runorder
08
mwt30
LOW30
mwt35
LOW35
mwt_sol1stepochsleep
6.966666666666667
mwt_sol1stepochsleep_binary
low
mwtmin
LOW10min
nas_beginning
104.1725
nas_beginning_b1
9.571874999999999
nas_beginning_changefromb1
94.60062500000001
nas_end
132.4325
nas_end_b1
17.49375
nas_end_changefromb1
114.93875000000001
pas_beginning
330.56187500000004
pas_beginning_b1
514.134375
pas_beginning_changefromb1
-183.5725
pas_end
301.64437499999997
pas_end_b1
582.7031249999999
pas_end_changefromb1
-281.05875
physical_specimen_location
CU Boulder_Wright Lab
physical_specimen_remaining
TRUE
plasma_sample
not applicable
plasma_sample_1_10
not applicable
plasma_sample_reltime
not applicable
psg_finalstageawakening_sp3
3
psg_finalstageawakening_sp4
2
psg_remlfromsol10min_sp3
46
psg_remlfromsol10min_sp4
47
psg_remlfromsol3min_sp3
46
psg_remlfromsol3min_sp4
47
psg_remmin_sp3
36
psg_remmin_sp4
36.5
psg_rempc_sp3
0.2
psg_rempc_sp4
0.202777778
psg_se_sp3
0.938888889
psg_se_sp4
0.944444444
psg_sol10_10min_sp3
5.5
psg_sol10_10min_sp4
6.5
psg_sol3_1p5min_sp3
5.5
psg_sol3_1p5min_sp4
6.5
psg_stage1min_sp3
12.5
psg_stage1min_sp4
7
psg_stage1pc_sp3
0.069444444
psg_stage1pc_sp4
0.038888889
psg_stage2min_sp3
91.5
psg_stage2min_sp4
85
psg_stage2pc_sp3
0.508333333
psg_stage2pc_sp4
0.472222222
psg_stage34min_sp3
29
psg_stage34min_sp4
41.5
psg_stage34pc_sp3
0.161111111
psg_stage34pc_sp4
0.230555556
psg_swslfromsol10_10min_sp3
15
psg_swslfromsol10_10min_sp4
10
psg_swslfromsol3_1p5min_sp3
15
psg_swslfromsol3_1p5min_sp4
10
psg_totalrecordingtime_sp3
180
psg_totalrecordingtime_sp4
180
psg_totalwakemin_sp3
11
psg_totalwakemin_sp4
10
psg_totalwakepc_sp3
0.061111111
psg_totalwakepc_sp4
0.055555556
psg_tst_sp3
169
psg_tst_sp4
170
psg_wasofromsol10min_sp3
5.5
psg_wasofromsol10min_sp4
4
psg_wasofromsol3min_sp3
5.5
psg_wasofromsol3min_sp4
4
pvt_1overmeanrt
0.001915707
pvt_1overmeanrt_b1
0.003096292
pvt_1overmeanrt_binary
low
pvt_1overmeanrt_changefromb1
-0.001180584
pvt_1overmedrt
0.002443751
pvt_1overmedrt_b1
0.003267974
pvt_1overmedrt_changefromb1
-8.24E-04
pvt_1overslowestrt
0.001014283
pvt_1overslowestrt_b1
0.0021398
pvt_1overslowestrt_binary
low
pvt_1overslowestrt_changefromb1
-0.001125518
pvt_anticipated
1.6666666666666667
pvt_anticipations_b1
0
pvt_anticipations_changefromb1
1.6666666666666667
pvt_fastestrt
266.8175866666667
pvt_fastestrt_b1
235
pvt_fastestrt_binary
high
pvt_fastestrt_changefromb1
31.817586666666667
pvt_lapses
22.866666666666667
pvt_lapses_b1
2
pvt_lapses_binary
high
pvt_lapses_changefromb1
20.866666666666667
pvt_logstdrt
2.5540118790780912
pvt_logstdrt_b1
1.849889082344024
pvt_logstdrt_binary
high
pvt_logstdrt_changefromb1
0.7041227967340681
pvtlapses30
HIGH30
pvtlapses35
HIGH35
qiita_sample_type
feces
remlfromsol3min_sp3
46
remlfromsol3min_sp4
47
remmin_sp3
36
remmin_sp4
36.5
rempc_sp3
0.2
rempc_sp4
0.202777778
sample name
qiita_sid_10513:10513.66138
sample_type
feces
scientific_name
human gut metagenome
segment_fecal
sleep_loss_1
segment_fecal_2early_mic
sl
segment_fecal_2late_mic
not applicable
segment_fecal_3_mic
sleep_loss_1
segment_fecal_met
sl
segment_fecal_numeric
1
sex
female
shotgun
no
sixteen_s
yes
stage1min_sp3
12.5
stage1pc_sp3
0.069444444
stage1pc_sp4
0.038888889
stage2pc_sp3
0.508333333
stage2pc_sp4
0.472222222
stage34min_sp3
29
stroop_congruent_medrtc
574.4333333333333
stroop_congruent_medrtc_b1
538
stroop_congruent_medrtc_changefromb1
36.43333333333333
stroop_incongruent_medrtc
725
stroop_incongruent_medrtc_b1
665
stroop_incongruent_medrtc_changefromb1
60
stroop_inhibitorycontrol
150.56666666666666
stroop_inhibitorycontrol_b1
127
stroop_inhibitorycontrol_binary
high
stroop_inhibitorycontrol_changefromb1
23.566666666666666
stroop_neutral_medrtc
602.9666666666667
stroop_neutral_medrtc_b1
539.5
stroop_neutral_medrtc_changefromb1
63.46666666666667
stroopincmrtc30
LOW30
stroopincmrtc35
LOW35
vas_alert
26.852666666666664
vas_alert_binary
low
visit
1
vs_ct
15.443416181836453
vs_ct_b1
17.491525423728813
vs_ct_changefromb1
-2.048109242
vs_medrtc
699.8333333333334
vs_medrtc_b1
782
vs_medrtc_changefromb1
-82.16666667
vs_medrtc_targetabsent
771.0333333333333
vs_medrtc_targetabsent_b1
984
vs_medrtc_targetabsent_changefromb1
-212.9666667
vs_medrtc_targetpresent
642.3
vs_medrtc_targetpresent_b1
643
vs_medrtc_targetpresent_changefromb1
-0.7
vs_missedtargetspc
14.42589483614948
vs_missedtargetspc_b1
8.695652173913043
vs_missedtargetspc_changefromb1
5.730242662236436
vs_slopetargetabsent
6.242333333333334
vs_slopetargetabsent_b1
22.26
vs_slopetargetabsent_binary
low
vs_slopetargetabsent_changefromb1
-16.01766667
vs_slopetargetpresent
5.760666666666666
vs_slopetargetpresent_b1
6.09
vs_slopetargetpresent_changefromb1
-0.329333333
wakeperiod
3
wasosp330
LOW30
wasosp335
LOW35
weight_kg
75.57
weight_unit
kg