human gut metagenome
stool sample 16NAVY12_V1
ENA first public
2025-11-21
INSDC center name
UCSDMI
INSDC status
public
Submitter Id
qiita_sid_10513:10513.53707
add_attempted
24.666666666666668
add_attempted_b1
27
add_attempted_changefromb1
-2.333333333
add_corr30
NA
add_corr35
HIGH35
add_correct
23.533333333333335
add_correct_b1
26
add_correct_changefromb1
-2.466666667
add_percent
95.51581433390896
add_percent_b1
96.29629629629629
add_percent_changefromb1
0.7804819623873271
age
35
age_units
years
anonymized_name
53707_fecal
bmi
23.6
collection date
2016-07-22
collection_time
9:00
collection_timesincesp1wake
2.72
collection_timestamp
2016-07-22 09:00
condition
baseline
condition_by_visit
baseline_visit1
condition_numeric
1
conjvstargab30
NA
conjvstargab35
NA
country
USA
cptcort30
HIGH30
cptcort35
HIGH35
cytokinecluster
3
dna_extracted
TRUE
elevation
1629
empo_1
Host-associated
empo_2
Host-associated (non-saline)
empo_3
Animal (non-saline)
empo_4
Animal distal gut (non-saline)
env_biome
urban biome
env_feature
human-associated habitat
env_material
fecal material
env_package
human-gut
fast_duration_hrs
not provided
fecalmicrobiomebetadiv30
HIGH30
fecalmicrobiomebetadiv35
HIGH35
fronzenimmediately
yes
geo_loc_name
USA:CO:Boulder
geographic location (country and/or sea)
USA
height
169.5
height_unit
cm
hemolysed
not applicable
host scientific name
Homo sapiens
host_age
35
host_age_units
years
host_body_habitat
UBERON:feces
host_body_mass_index
23.6
host_body_product
UBERON:feces
host_body_site
UBERON:feces
host_common_name
human
host_height
169.5
host_height_units
cm
host_life_stage
adult
host_subject_id
16NAVY12
host_subject_id_letter
j
host_taxid
9606
host_weight
67.81
host_weight_units
kg
kss_beginning
6.266666666666667
kss_beginning_b1
2
kss_beginning_changefromb1
4.266666666666667
kss_end
6.866666666666666
kss_end_b1
3
kss_end_changefromb1
3.8666666666666667
kss_middle
6.6
kss_middle_b1
2
kss_middle_changefromb1
4.6
latitude
40.1
longitude
-107.2
metabolomics
yes
missedtargetspc_changefromb1
0
mwt30
HIGH30
mwt35
HIGH35
mwt_sol1stepochsleep
16.142857142857142
mwt_sol1stepochsleep_12
morethan12min
mwt_sol1stepochsleep_8
morethan8min
mwt_sol1stepochsleep_binary
high
mwt_sol1stepochstage2
20
mwtmin
HIGH14min
nas_beginning
30.596875000000004
nas_beginning_b1
5.765625000000001
nas_beginning_changefromb1
24.831249999999997
nas_end
35.400625
nas_end_b1
3.7218749999999994
nas_end_changefromb1
31.678749999999997
pas_beginning
418.89375000000007
pas_beginning_b1
623.71875
pas_beginning_changefromb1
-204.825
pas_end
320.5356249999999
pas_end_b1
627.58125
pas_end_changefromb1
-307.045625
physical_specimen_location
CU Boulder_Wright Lab
physical_specimen_remaining
FALSE
plasma_sample
not applicable
plasma_sample_1_10
not applicable
plasma_sample_reltime
not applicable
psg_finalstageawakening_sp3
2
psg_finalstageawakening_sp4
2
psg_remlfromsol10min_sp3
0
psg_remlfromsol10min_sp4
50
psg_remlfromsol3min_sp3
0
psg_remlfromsol3min_sp4
50
psg_remmin_sp3
36.5
psg_remmin_sp4
14.5
psg_rempc_sp3
0.203342618
psg_rempc_sp4
0.08
psg_se_sp3
0.852367688
psg_se_sp4
0.8
psg_sol10_10min_sp3
4.5
psg_sol10_10min_sp4
25
psg_sol3_1p5min_sp3
4.5
psg_sol3_1p5min_sp4
25
psg_stage1min_sp3
12
psg_stage1min_sp4
6
psg_stage1pc_sp3
0.066852368
psg_stage1pc_sp4
0.03
psg_stage2min_sp3
81.5
psg_stage2min_sp4
57.5
psg_stage2pc_sp3
0.454038997
psg_stage2pc_sp4
0.32
psg_stage34min_sp3
23
psg_stage34min_sp4
66
psg_stage34pc_sp3
0.128133705
psg_stage34pc_sp4
0.37
psg_swslfromsol10_10min_sp3
49.5
psg_swslfromsol10_10min_sp4
8
psg_swslfromsol3_1p5min_sp3
49.5
psg_swslfromsol3_1p5min_sp4
8
psg_totalrecordingtime_sp3
179.5
psg_totalrecordingtime_sp4
180
psg_totalwakemin_sp3
26.5
psg_totalwakemin_sp4
36
psg_totalwakepc_sp3
0.147632312
psg_totalwakepc_sp4
0.2
psg_tst_sp3
153
psg_tst_sp4
144
psg_wasofromsol10min_sp3
22
psg_wasofromsol10min_sp4
11
psg_wasofromsol3min_sp3
22
psg_wasofromsol3min_sp4
11
pvt_1overmeanrt
0.002991113
pvt_1overmeanrt_b1
0.003610108
pvt_1overmeanrt_binary
high
pvt_1overmeanrt_changefromb1
-6.19E-04
pvt_1overmedrt
0.003167218
pvt_1overmedrt_b1
0.003883495
pvt_1overmedrt_changefromb1
-7.16E-04
pvt_1overslowestrt
0.001888312
pvt_1overslowestrt_b1
0.002463054
pvt_1overslowestrt_binary
high
pvt_1overslowestrt_changefromb1
-5.75E-04
pvt_anticipated
0.13333333333333333
pvt_anticipations_b1
0
pvt_anticipations_changefromb1
0.13333333333333333
pvt_fastestrt
243.45574
pvt_fastestrt_b1
217.30000000000007
pvt_fastestrt_binary
high
pvt_fastestrt_changefromb1
26.15573999999999
pvt_lapses
4.533333333333333
pvt_lapses_b1
1
pvt_lapses_binary
low
pvt_lapses_changefromb1
3.533333333333333
pvt_logstdrt
1.9403367329602301
pvt_logstdrt_b1
1.7517185662242232
pvt_logstdrt_binary
low
pvt_logstdrt_changefromb1
0.18861816673600706
pvtlapses30
LOW30
pvtlapses35
LOW35
qiita_sample_type
feces
remlfromsol3min_sp3
0
remlfromsol3min_sp4
50
remmin_sp3
36.5
remmin_sp4
14.5
rempc_sp3
0.203342618
rempc_sp4
0.08
sample name
qiita_sid_10513:10513.53707
sample_type
feces
scientific_name
human gut metagenome
segment_fecal
bl
segment_fecal_2early_mic
bl
segment_fecal_2late_mic
bl
segment_fecal_3_mic
bl
segment_fecal_met
not applicable
segment_fecal_numeric
0
segment_fecal_shotgun
bl
sex
female
shotgun
yes
sixteen_s
yes
stage1min_sp3
12
stage1pc_sp3
0.066852368
stage1pc_sp4
0.03
stage2pc_sp3
0.454038997
stage2pc_sp4
0.32
stage34min_sp3
23
stroop_congruent_medrtc
680.4666666666667
stroop_congruent_medrtc_b1
666.5
stroop_congruent_medrtc_changefromb1
13.966666666666667
stroop_incongruent_medrtc
960
stroop_incongruent_medrtc_b1
917.5
stroop_incongruent_medrtc_changefromb1
42.5
stroop_inhibitorycontrol
279.53333333333336
stroop_inhibitorycontrol_b1
251
stroop_inhibitorycontrol_binary
high
stroop_inhibitorycontrol_changefromb1
28.533333333333335
stroop_neutral_medrtc
754.7333333333333
stroop_neutral_medrtc_b1
658.5
stroop_neutral_medrtc_changefromb1
96.23333333333333
stroopincmrtc30
HIGH30
stroopincmrtc35
HIGH35
vas_alert
22.399333333333335
vas_alert_binary
low
visit
1
vs_ct
18.193325885120863
vs_ct_b1
17.43243243243243
vs_ct_changefromb1
0.7608934526884336
vs_medrtc
745.0333333333333
vs_medrtc_b1
816
vs_medrtc_changefromb1
-70.96666667
vs_medrtc_targetabsent
887.2
vs_medrtc_targetabsent_b1
1020
vs_medrtc_targetabsent_changefromb1
-132.8
vs_medrtc_targetpresent
628.8
vs_medrtc_targetpresent_b1
610
vs_medrtc_targetpresent_changefromb1
18.8
vs_missedtargetspc
3.879740942035764
vs_missedtargetspc_b1
8.510638298
vs_missedtargetspc_changefromb1
-4.630897356
vs_slopetargetabsent
13.151666666666667
vs_slopetargetabsent_b1
16.285
vs_slopetargetabsent_binary
low
vs_slopetargetabsent_changefromb1
-3.133333333
vs_slopetargetpresent
4.906
vs_slopetargetpresent_b1
8.11
vs_slopetargetpresent_changefromb1
-3.204
wakeperiod
1
wasosp330
HIGH30
wasosp335
HIGH35
weight_kg
67.81
weight_unit
kg