Clostridium sp. CAG:221
This sample represents a Single-Cell Amplified Genome derived from the environmental sample ERS30804966. Cells were isolated using semi-permeable capsules with four-component combinatorial barcoding.
ENA first public
2026-07-28
INSDC center name
DTU-GE
INSDC status
public
Submitter Id
pF_W9_H5aaqo_SAG
WGA amplification approach
mda based
assembly quality
Many fragments with little to no review of assembly other than reporting of standard assembly statistics
assembly software
SPAdes --sc --careful --disable-rr --disable-gzip-output
broad-scale environmental context
animal-associated environment
broker name
DTU-GE
collection date
2019
completeness score
35.6
completeness software
CheckM2
contamination score
3.04
environmental medium
feces
geographic location (country and/or sea)
Denmark
geographic location (latitude)
55.786
geographic location (longitude)
12.522
isolation_source
pig feces
local environmental context
pig feces
metagenomic source
pig fecal metagenome
project name
PRJEB120797
sample derived from
ERS30804966
sample name
pF_W9_H5aaqo_SAG
scientific_name
Clostridium sp. CAG:221
single cell or viral particle lysis approach
combination
sorting technology
other
taxonomic identity marker
GTDB-Tk