human gut metagenome
Human gut metagenome sample
ENA first public
2025-07-12
INSDC center name
Malopolska Centre of Biotechnology
INSDC status
public
Submitter Id
deep_440
alcohol consumption frequency
not provided
allergy
no
antibiotic treatment during hospitalization
no
antibiotics before hospital
no
broad-scale environmental context
material anatomical entity
collection date
2021-03-27
death
no
diabetes
yes
diabetes type
type II diabetes
environmental medium
feces
ethnicity
White
geographic location (country and/or sea)
Poland
geographic location (latitude)
52.24
geographic location (longitude)
21.02
hospital
CSK
host body product
stool
host body site
intestine
host body-mass index
29.1
host height
155
host sex
female
host subject id
242
hypertension
yes
icu
no
local environmental context
organism substance
location of the tumour
not provided
medications dose
not provided
nationality
Polish
other medical conditions
yes
other medications
yes
project name
Gut Microbiome Dynamics and Predictive Value in Hospitalized COVID-19 Patients: A Comparative Analysis of Shallow and Deep Shotgun Sequencing
sample human DNA contamination
0.4
sample name
deep_440
sample storage temperature
-20
scientific_name
human gut metagenome
seasonal allergy
not provided
sequencing method
Illumina NovaSeq 6000
smoker
no
smoking frequency
never
subject type
patient (case)
tumour
no