human gut metagenome
stool sample 18NAVY28_V2
ENA first public
2025-11-21
INSDC center name
UCSDMI
INSDC status
public
Submitter Id
qiita_sid_10513:10513.66114
add_attempted
26.6
add_attempted_b1
33
add_attempted_changefromb1
-6.4
add_corr30
HIGH30
add_corr35
HIGH35
add_correct
25.4
add_correct_b1
33
add_correct_changefromb1
-7.6
add_percent
95.74785407108902
add_percent_b1
100
add_percent_changefromb1
4.252145928910977
age
23
age_units
years
anonymized_name
66114_fecal
bmi
22.98
collection date
2018-04-13
collection_time
8:42
collection_timesincesp1wake
2.53
collection_timestamp
2018-04-13 08:42
condition
baseline
condition_by_visit
baseline_visit2
condition_numeric
1
conjvstargab30
NA
conjvstargab35
LOW35
country
USA
cptcort30
LOW30
cptcort35
LOW35
cytokinecluster
1
dna_extracted
TRUE
elevation
1629
empo_1
Host-associated
empo_2
Host-associated (non-saline)
empo_3
Animal (non-saline)
empo_4
Animal distal gut (non-saline)
env_biome
urban biome
env_feature
human-associated habitat
env_material
fecal material
env_package
human-gut
fast_duration_hrs
not provided
fecalmicrobiomebetadiv30
LOW30
fecalmicrobiomebetadiv35
LOW35
fronzenimmediately
yes
geo_loc_name
USA:CO:Boulder
geographic location (country and/or sea)
USA
height
180.4
height_unit
cm
hemolysed
not applicable
host scientific name
Homo sapiens
host_age
23
host_age_units
years
host_body_habitat
UBERON:feces
host_body_mass_index
22.98
host_body_product
UBERON:feces
host_body_site
UBERON:feces
host_common_name
human
host_height
180.4
host_height_units
cm
host_life_stage
adult
host_subject_id
18NAVY28
host_subject_id_letter
q
host_taxid
9606
host_weight
74.8
host_weight_units
kg
kss_beginning
6.8
kss_beginning_b1
4
kss_beginning_changefromb1
2.8
kss_end
7.4
kss_end_b1
5
kss_end_changefromb1
2.4
kss_middle
7.533333333333333
kss_middle_b1
5
kss_middle_changefromb1
2.533333333333333
latitude
40.1
longitude
-107.2
metabolomics
yes
missedtargetspc_changefromb1
0
ms_experiment
01
ms_filename
18navy28.v2.20180413.mzxml
ms_plate_position
1_a12
ms_runorder
14
mwt30
LOW30
mwt35
LOW35
mwt_sol1stepochsleep
6.8
mwt_sol1stepochsleep_12
morethan12min
mwt_sol1stepochsleep_8
morethan8min
mwt_sol1stepochsleep_binary
low
mwt_sol1stepochstage2
20
mwtmin
LOW10min
nas_beginning
290.72999999999996
nas_beginning_b1
351.15937499999995
nas_beginning_changefromb1
-60.429375
nas_end
302.735
nas_end_b1
361.771875
nas_end_changefromb1
-59.036875
pas_beginning
194.11062499999997
pas_beginning_b1
216.1031250000001
pas_beginning_changefromb1
-21.9925
pas_end
208.1125
pas_end_b1
209.04375
pas_end_changefromb1
-0.93125
physical_specimen_location
CU Boulder_Wright Lab
physical_specimen_remaining
TRUE
plasma_sample
not applicable
plasma_sample_1_10
not applicable
plasma_sample_reltime
not applicable
psg_finalstageawakening_sp3
2
psg_finalstageawakening_sp4
r
psg_remlfromsol10min_sp3
4
psg_remlfromsol10min_sp4
55.5
psg_remlfromsol3min_sp3
4
psg_remlfromsol3min_sp4
55.5
psg_remmin_sp3
34
psg_remmin_sp4
36.5
psg_rempc_sp3
0.187845304
psg_rempc_sp4
0.203342618
psg_se_sp3
0.96961326
psg_se_sp4
0.986072423
psg_sol10_10min_sp3
2.5
psg_sol10_10min_sp4
0
psg_sol3_1p5min_sp3
2.5
psg_sol3_1p5min_sp4
0
psg_stage1min_sp3
5.5
psg_stage1min_sp4
3
psg_stage1pc_sp3
0.03038674
psg_stage1pc_sp4
0.016713092
psg_stage2min_sp3
95
psg_stage2min_sp4
78
psg_stage2pc_sp3
0.524861878
psg_stage2pc_sp4
0.43454039
psg_stage34min_sp3
41
psg_stage34min_sp4
59.5
psg_stage34pc_sp3
0.226519337
psg_stage34pc_sp4
0.331476323
psg_swslfromsol10_10min_sp3
45
psg_swslfromsol10_10min_sp4
9
psg_swslfromsol3_1p5min_sp3
45
psg_swslfromsol3_1p5min_sp4
9
psg_totalrecordingtime_sp3
181
psg_totalrecordingtime_sp4
179.5
psg_totalwakemin_sp3
5.5
psg_totalwakemin_sp4
2.5
psg_totalwakepc_sp3
0.03038674
psg_totalwakepc_sp4
0.013927577
psg_tst_sp3
175.5
psg_tst_sp4
177
psg_wasofromsol10min_sp3
3
psg_wasofromsol10min_sp4
2.5
psg_wasofromsol3min_sp3
3
psg_wasofromsol3min_sp4
2.5
pvt_1overmeanrt
9.427944537123582e-4
pvt_1overmeanrt_b1
0.002802624
pvt_1overmeanrt_binary
NA
pvt_1overmeanrt_changefromb1
-0.001859829
pvt_1overmedrt
0.001530963
pvt_1overmedrt_b1
0.002857143
pvt_1overmedrt_changefromb1
-0.00132618
pvt_1overslowestrt
4.0716748485083206e-4
pvt_1overslowestrt_b1
0.001871102
pvt_1overslowestrt_binary
NA
pvt_1overslowestrt_changefromb1
-0.001463935
pvt_anticipated
4.733333333333333
pvt_anticipations_b1
0
pvt_anticipations_changefromb1
4.733333333333333
pvt_fastestrt
315.16164000000003
pvt_fastestrt_b1
244.55560000000006
pvt_fastestrt_binary
high
pvt_fastestrt_changefromb1
70.60604
pvt_lapses
39
pvt_lapses_b1
4
pvt_lapses_binary
high
pvt_lapses_changefromb1
35
pvt_logstdrt
3.165092025251752
pvt_logstdrt_b1
1.935202850730551
pvt_logstdrt_binary
high
pvt_logstdrt_changefromb1
1.2298891745212017
pvtlapses30
HIGH30
pvtlapses35
HIGH35
qiita_sample_type
feces
remlfromsol3min_sp3
4
remlfromsol3min_sp4
55.5
remmin_sp3
34
remmin_sp4
36.5
rempc_sp3
0.187845304
rempc_sp4
0.203342618
sample name
qiita_sid_10513:10513.66114
sample_type
feces
scientific_name
human gut metagenome
segment_fecal
bl
segment_fecal_2early_mic
bl
segment_fecal_2late_mic
bl
segment_fecal_3_mic
bl
segment_fecal_met
bl
segment_fecal_numeric
0
segment_fecal_shotgun
bl
sex
female
shotgun
yes
sixteen_s
yes
stage1min_sp3
5.5
stage1pc_sp3
0.03038674
stage1pc_sp4
0.016713092
stage2pc_sp3
0.524861878
stage2pc_sp4
0.43454039
stage34min_sp3
41
stroop_congruent_medrtc
595.8666666666667
stroop_congruent_medrtc_b1
554.5
stroop_congruent_medrtc_changefromb1
41.36666666666667
stroop_incongruent_medrtc
658.5
stroop_incongruent_medrtc_b1
614.5
stroop_incongruent_medrtc_changefromb1
44
stroop_inhibitorycontrol
62.63333333333333
stroop_inhibitorycontrol_b1
60
stroop_inhibitorycontrol_binary
low
stroop_inhibitorycontrol_changefromb1
2.6333333333333333
stroop_neutral_medrtc
613.6666666666666
stroop_neutral_medrtc_b1
564
stroop_neutral_medrtc_changefromb1
49.666666666666664
stroopincmrtc30
LOW30
stroopincmrtc35
LOW35
vas_alert
31.251333333333335
vas_alert_binary
low
visit
2
vs_ct
14.063990326177969
vs_ct_b1
16.834532374100718
vs_ct_changefromb1
-2.770542048
vs_medrtc
674.1666666666666
vs_medrtc_b1
648
vs_medrtc_changefromb1
26.166666666666668
vs_medrtc_targetabsent
769.6333333333333
vs_medrtc_targetabsent_b1
694
vs_medrtc_targetabsent_changefromb1
75.63333333333334
vs_medrtc_targetpresent
597.3666666666667
vs_medrtc_targetpresent_b1
541
vs_medrtc_targetpresent_changefromb1
56.36666666666667
vs_missedtargetspc
15.000745283599075
vs_missedtargetspc_b1
18.867924528301888
vs_missedtargetspc_changefromb1
-3.867179245
vs_slopetargetabsent
4.018
vs_slopetargetabsent_b1
5.465
vs_slopetargetabsent_binary
low
vs_slopetargetabsent_changefromb1
-1.447
vs_slopetargetpresent
4.319
vs_slopetargetpresent_b1
2.815
vs_slopetargetpresent_changefromb1
1.5040000000000002
wakeperiod
0
wasosp330
LOW30
wasosp335
LOW35
weight_kg
74.8
weight_unit
kg