human gut metagenome
stool sample 17NAVY22_V2
ENA first public
2025-11-21
INSDC center name
UCSDMI
INSDC status
public
Submitter Id
qiita_sid_10513:10513.66172
add_attempted
16.533333333333335
add_attempted_b1
19
add_attempted_changefromb1
-2.466666667
add_corr30
LOW30
add_corr35
LOW35
add_correct
15.733333333333333
add_correct_b1
18
add_correct_changefromb1
-2.266666667
add_percent
94.91332497911446
add_percent_b1
94.73684210526315
add_percent_changefromb1
-0.176482874
age
20
age_units
years
anonymized_name
66172_fecal
bmi
19.21
collection date
2017-08-21
collection_time
10:00
collection_timesincesp1wake
74.17
collection_timestamp
2017-08-21 10:00
condition
scd
condition_by_visit
scd_visit2
condition_numeric
2
conjvstargab30
HIGH30
conjvstargab35
HIGH35
country
USA
cptcort30
NA
cptcort35
NA
cytokinecluster
3
dna_extracted
TRUE
elevation
1629
empo_1
Host-associated
empo_2
Host-associated (non-saline)
empo_3
Animal (non-saline)
empo_4
Animal distal gut (non-saline)
env_biome
urban biome
env_feature
human-associated habitat
env_material
fecal material
env_package
human-gut
fast_duration_hrs
not provided
fecalmicrobiomebetadiv30
LOW30
fecalmicrobiomebetadiv35
LOW35
fronzenimmediately
yes
geo_loc_name
USA:CO:Boulder
geographic location (country and/or sea)
USA
height
162
height_unit
cm
hemolysed
not applicable
host scientific name
Homo sapiens
host_age
20
host_age_units
years
host_body_habitat
UBERON:feces
host_body_mass_index
19.21
host_body_product
UBERON:feces
host_body_site
UBERON:feces
host_common_name
human
host_height
162
host_height_units
cm
host_life_stage
adult
host_subject_id
17NAVY22
host_subject_id_letter
n
host_taxid
9606
host_weight
50.67
host_weight_units
kg
kss_beginning
6.266666666666667
kss_beginning_b1
3
kss_beginning_changefromb1
3.2666666666666666
kss_end
7.6
kss_end_b1
3
kss_end_changefromb1
4.6
kss_middle
7.533333333333333
kss_middle_b1
3
kss_middle_changefromb1
4.533333333333333
latitude
40.1
longitude
-107.2
metabolomics
yes
missedtargetspc_changefromb1
-4
ms_experiment
01
ms_filename
17navy22.v2.20170821.mzxml
ms_plate_position
1_e08
ms_runorder
63
mwt30
LOW30
mwt35
LOW35
mwt_sol1stepochsleep
5.966666666666667
mwt_sol1stepochsleep_12
lessthanorequalto12
mwt_sol1stepochsleep_8
lessthanorequalto8
mwt_sol1stepochsleep_binary
low
mwt_sol1stepochstage2
12.33333333
mwtmin
LOW10min
nas_beginning
47.686249999999994
nas_beginning_b1
50.718750000000014
nas_beginning_changefromb1
-3.0325
nas_end
90.70125
nas_end_b1
10.096875
nas_end_changefromb1
80.604375
pas_beginning
129.44125
pas_beginning_b1
70.01250000000003
pas_beginning_changefromb1
59.42875
pas_end
135.706875
pas_end_b1
64.64062500000001
pas_end_changefromb1
71.06625000000001
physical_specimen_location
CU Boulder_Wright Lab
physical_specimen_remaining
TRUE
plasma_sample
not applicable
plasma_sample_1_10
not applicable
plasma_sample_reltime
not applicable
psg_finalstageawakening_sp3
r
psg_finalstageawakening_sp4
3
psg_remlfromsol10min_sp3
48
psg_remlfromsol10min_sp4
35
psg_remlfromsol3min_sp3
53.5
psg_remlfromsol3min_sp4
41
psg_remmin_sp3
39.5
psg_remmin_sp4
41.5
psg_rempc_sp3
0.219444444
psg_rempc_sp4
0.23
psg_se_sp3
0.938888889
psg_se_sp4
0.95
psg_sol10_10min_sp3
11.5
psg_sol10_10min_sp4
11
psg_sol3_1p5min_sp3
6
psg_sol3_1p5min_sp4
5
psg_stage1min_sp3
13
psg_stage1min_sp4
5.5
psg_stage1pc_sp3
0.072222222
psg_stage1pc_sp4
0.03
psg_stage2min_sp3
65
psg_stage2min_sp4
70.5
psg_stage2pc_sp3
0.361111111
psg_stage2pc_sp4
0.39
psg_stage34min_sp3
51.5
psg_stage34min_sp4
53
psg_stage34pc_sp3
0.286111111
psg_stage34pc_sp4
0.29
psg_swslfromsol10_10min_sp3
10
psg_swslfromsol10_10min_sp4
6
psg_swslfromsol3_1p5min_sp3
15.5
psg_swslfromsol3_1p5min_sp4
12
psg_totalrecordingtime_sp3
180
psg_totalrecordingtime_sp4
180
psg_totalwakemin_sp3
11
psg_totalwakemin_sp4
9.5
psg_totalwakepc_sp3
0.061111111
psg_totalwakepc_sp4
0.05
psg_tst_sp3
169
psg_tst_sp4
170.5
psg_wasofromsol10min_sp3
6.5
psg_wasofromsol10min_sp4
5
psg_wasofromsol3min_sp3
6.5
psg_wasofromsol3min_sp4
5
pvt_1overmeanrt
0.001254709
pvt_1overmeanrt_b1
0.003528131
pvt_1overmeanrt_binary
low
pvt_1overmeanrt_changefromb1
-0.002273422
pvt_1overmedrt
0.002316252
pvt_1overmedrt_b1
0.003710575
pvt_1overmedrt_changefromb1
-0.001394323
pvt_1overslowestrt
4.743047889211426e-4
pvt_1overslowestrt_b1
0.002182877
pvt_1overslowestrt_binary
low
pvt_1overslowestrt_changefromb1
-0.001708572
pvt_anticipated
3.1333333333333333
pvt_anticipations_b1
0
pvt_anticipations_changefromb1
3.1333333333333333
pvt_fastestrt
257.59228
pvt_fastestrt_b1
194.44439999999997
pvt_fastestrt_binary
high
pvt_fastestrt_changefromb1
63.14788
pvt_lapses
26.2
pvt_lapses_b1
3
pvt_lapses_binary
high
pvt_lapses_changefromb1
23.2
pvt_logstdrt
3.1211873498814855
pvt_logstdrt_b1
1.8925242302944765
pvt_logstdrt_binary
high
pvt_logstdrt_changefromb1
1.228663119587009
pvtlapses30
HIGH30
pvtlapses35
HIGH35
qiita_sample_type
feces
remlfromsol3min_sp3
53.5
remlfromsol3min_sp4
41
remmin_sp3
39.5
remmin_sp4
41.5
rempc_sp3
0.219444444
rempc_sp4
0.23
sample name
qiita_sid_10513:10513.66172
sample_type
feces
scientific_name
human gut metagenome
segment_fecal
sleep_loss_2
segment_fecal_2early_mic
not applicable
segment_fecal_2late_mic
sl
segment_fecal_3_mic
sleep_loss_2
segment_fecal_met
not applicable
segment_fecal_numeric
2
segment_fecal_shotgun
sl
sex
female
shotgun
yes
sixteen_s
yes
stage1min_sp3
13
stage1pc_sp3
0.072222222
stage1pc_sp4
0.03
stage2pc_sp3
0.361111111
stage2pc_sp4
0.39
stage34min_sp3
51.5
stroop_congruent_medrtc
726.1333333333333
stroop_congruent_medrtc_b1
635
stroop_congruent_medrtc_changefromb1
91.13333333333334
stroop_incongruent_medrtc
788.4666666666667
stroop_incongruent_medrtc_b1
734
stroop_incongruent_medrtc_changefromb1
54.46666666666667
stroop_inhibitorycontrol
62.333333333333336
stroop_inhibitorycontrol_b1
99
stroop_inhibitorycontrol_binary
low
stroop_inhibitorycontrol_changefromb1
-36.66666667
stroop_neutral_medrtc
744.6666666666666
stroop_neutral_medrtc_b1
723.5
stroop_neutral_medrtc_changefromb1
21.166666666666668
stroopincmrtc30
NA
stroopincmrtc35
NA
vas_alert
20.271333333333338
vas_alert_binary
low
visit
2
vs_ct
13.724585600042362
vs_ct_b1
18.613138686131386
vs_ct_changefromb1
-4.888553086
vs_medrtc
1323.4
vs_medrtc_b1
607
vs_medrtc_changefromb1
716.4
vs_medrtc_targetabsent
1632.7333333333333
vs_medrtc_targetabsent_b1
684.5
vs_medrtc_targetabsent_changefromb1
948.2333333333333
vs_medrtc_targetpresent
1027.4
vs_medrtc_targetpresent_b1
525
vs_medrtc_targetpresent_changefromb1
502.4
vs_missedtargetspc
7.936253532526824
vs_missedtargetspc_b1
11.627906976744185
vs_missedtargetspc_changefromb1
-3.691653444
vs_slopetargetabsent
24.952666666666666
vs_slopetargetabsent_b1
5.855
vs_slopetargetabsent_binary
high
vs_slopetargetabsent_changefromb1
19.097666666666665
vs_slopetargetpresent
9.955333333333334
vs_slopetargetpresent_b1
0.81
vs_slopetargetpresent_changefromb1
9.145333333333333
wakeperiod
4
wasosp330
LOW30
wasosp335
LOW35
weight_kg
50.67
weight_unit
kg