uncultured Corynebacterium sp.
This sample represents a binned metagenome assembled from the metagenomic runs SRR1624786, SRR1624787, SRR1624788, SRR1624789, SRR1624790, SRR1624791, SRR1624792, SRR1624793, SRR1624794, SRR3183432, SRR3183433, SRR3183434, SRR3183601, SRR3183602, SRR3183603 of study SRP002480.
INSDC center name
NIH/NHGRI
Submitter Id
SAMPLE_82_bin.2
assembly quality
Many fragments with little to no review of assembly other than reporting of standard assembly statistics
assembly software
metaSPAdes_v3.13.0
binning parameters
--maxbin2 --metabat2 --concoct
binning software
metaWRAP_v1.2.1
broad-scale environmental context
human skin
collection date
not applicable
completeness score
62.58
completeness software
CheckM_v1.1.2
contamination score
0.39
environmental medium
Skin swab
geographic location (country and/or sea)
USA
geographic location (latitude)
not applicable
geographic location (longitude)
not applicable
investigation type
metagenome-assembled genome
isolation_source
human skin metagenome
local environmental context
Ch-R
metagenomic source
human skin metagenome
project name
Metagenomic assemblies and bins underlying the Skin Microbial Genome Catalogue
sample derived from
ERS25060648
sample name
SAMPLE_82_bin.2
scientific_name
uncultured Corynebacterium sp.
sequencing method
Illumina HiSeq 2000
taxonomic identity marker
multi-marker approach