human gut metagenome
stool sample 16NAVY13_V2
ENA first public
2025-11-21
INSDC center name
UCSDMI
INSDC status
public
Submitter Id
qiita_sid_10513:10513.53993
add_attempted
20.4
add_attempted_b1
22
add_attempted_changefromb1
-1.6
add_corr30
NA
add_corr35
LOW35
add_correct
19.133333333333333
add_correct_b1
22
add_correct_changefromb1
-2.866666667
add_percent
94.50274211178616
add_percent_b1
100
add_percent_changefromb1
5.497257888213838
age
30
age_units
years
anonymized_name
53993_fecal
bmi
23.7
collection date
2016-10-09
collection_time
10:45
collection_timesincesp1wake
50.75
collection_timestamp
2016-10-09 10:45
condition
scd
condition_by_visit
scd_visit2
condition_numeric
2
conjvstargab30
NA
conjvstargab35
NA
country
USA
cptcort30
LOW30
cptcort35
LOW35
cytokinecluster
1
dna_extracted
TRUE
elevation
1629
empo_1
Host-associated
empo_2
Host-associated (non-saline)
empo_3
Animal (non-saline)
empo_4
Animal distal gut (non-saline)
env_biome
urban biome
env_feature
human-associated habitat
env_material
fecal material
env_package
human-gut
fast_duration_hrs
not provided
fecalmicrobiomebetadiv30
NA
fecalmicrobiomebetadiv35
NA
fronzenimmediately
yes
geo_loc_name
USA:CO:Boulder
geographic location (country and/or sea)
USA
height
180
height_unit
cm
hemolysed
not applicable
host scientific name
Homo sapiens
host_age
30
host_age_units
years
host_body_habitat
UBERON:feces
host_body_mass_index
23.7
host_body_product
UBERON:feces
host_body_site
UBERON:feces
host_common_name
human
host_height
180
host_height_units
cm
host_life_stage
adult
host_subject_id
16NAVY13
host_subject_id_letter
k
host_taxid
9606
host_weight
76.8
host_weight_units
kg
kss_beginning
4.666666666666667
kss_beginning_b1
2
kss_beginning_changefromb1
2.6666666666666665
kss_end
5.533333333333333
kss_end_b1
3
kss_end_changefromb1
2.533333333333333
kss_middle
5.533333333333333
kss_middle_b1
3
kss_middle_changefromb1
2.533333333333333
latitude
40.1
longitude
-107.2
metabolomics
yes
ms_experiment
01
ms_filename
16navy13.v2.20161009.mzxml
ms_plate_position
1_b05
ms_runorder
20
mwt30
NA
mwt35
NA
mwt_sol1stepochsleep
9.666666666666666
mwt_sol1stepochsleep_binary
low
mwtmin
NA
nas_beginning
13.318125
nas_beginning_b1
7.556250000000001
nas_beginning_changefromb1
5.761875
nas_end
30.191875000000003
nas_end_b1
10.856250000000003
nas_end_changefromb1
19.335624999999997
pas_beginning
724.251875
pas_beginning_b1
810.4875000000003
pas_beginning_changefromb1
-86.235625
pas_end
735.3293749999999
pas_end_b1
810.1031250000004
pas_end_changefromb1
-74.77375
physical_specimen_location
CU Boulder_Wright Lab
physical_specimen_remaining
TRUE
plasma_sample
not applicable
plasma_sample_1_10
not applicable
plasma_sample_reltime
not applicable
psg_finalstageawakening_sp3
not provided
psg_finalstageawakening_sp4
not provided
psg_remlfromsol10min_sp3
not provided
psg_remlfromsol10min_sp4
not provided
psg_remlfromsol3min_sp3
not provided
psg_remlfromsol3min_sp4
not provided
psg_remmin_sp3
not provided
psg_remmin_sp4
not provided
psg_rempc_sp3
not provided
psg_rempc_sp4
not provided
psg_se_sp3
not provided
psg_se_sp4
not provided
psg_sol10_10min_sp3
not provided
psg_sol10_10min_sp4
not provided
psg_sol3_1p5min_sp3
not provided
psg_sol3_1p5min_sp4
not provided
psg_stage1min_sp3
not provided
psg_stage1min_sp4
not provided
psg_stage1pc_sp3
not provided
psg_stage1pc_sp4
not provided
psg_stage2min_sp3
not provided
psg_stage2min_sp4
not provided
psg_stage2pc_sp3
not provided
psg_stage2pc_sp4
not provided
psg_stage34min_sp3
not provided
psg_stage34min_sp4
not provided
psg_stage34pc_sp3
not provided
psg_stage34pc_sp4
not provided
psg_swslfromsol10_10min_sp3
not provided
psg_swslfromsol10_10min_sp4
not provided
psg_swslfromsol3_1p5min_sp3
not provided
psg_swslfromsol3_1p5min_sp4
not provided
psg_totalrecordingtime_sp3
not provided
psg_totalrecordingtime_sp4
not provided
psg_totalwakemin_sp3
not provided
psg_totalwakemin_sp4
not provided
psg_totalwakepc_sp3
not provided
psg_totalwakepc_sp4
not provided
psg_tst_sp3
not provided
psg_tst_sp4
not provided
psg_wasofromsol10min_sp3
not provided
psg_wasofromsol10min_sp4
not provided
psg_wasofromsol3min_sp3
not provided
psg_wasofromsol3min_sp4
not provided
pvt_1overmeanrt
0.002518392
pvt_1overmeanrt_b1
0.003233316
pvt_1overmeanrt_binary
low
pvt_1overmeanrt_changefromb1
-7.15E-04
pvt_1overmedrt
0.002675361
pvt_1overmedrt_b1
0.003311258
pvt_1overmedrt_changefromb1
-6.36E-04
pvt_1overslowestrt
0.001539687
pvt_1overslowestrt_b1
0.002325041
pvt_1overslowestrt_binary
low
pvt_1overslowestrt_changefromb1
-7.85E-04
pvt_anticipated
0.9333333333333333
pvt_anticipations_b1
0
pvt_anticipations_changefromb1
0.9333333333333333
pvt_fastestrt
263.91538
pvt_fastestrt_b1
223.5
pvt_fastestrt_binary
high
pvt_fastestrt_changefromb1
40.415380000000006
pvt_lapses
13.266666666666667
pvt_lapses_b1
0
pvt_lapses_binary
high
pvt_lapses_changefromb1
13.266666666666667
pvt_logstdrt
2.083958947474836
pvt_logstdrt_b1
1.774646140000719
pvt_logstdrt_binary
low
pvt_logstdrt_changefromb1
0.3093128074741177
pvtlapses30
NA
pvtlapses35
NA
qiita_sample_type
feces
remlfromsol3min_sp3
not provided
remlfromsol3min_sp4
not provided
remmin_sp3
not provided
remmin_sp4
not provided
rempc_sp3
not provided
rempc_sp4
not provided
sample name
qiita_sid_10513:10513.53993
sample_type
feces
scientific_name
human gut metagenome
segment_fecal
sleep_loss_1
segment_fecal_2early_mic
sl
segment_fecal_2late_mic
not applicable
segment_fecal_3_mic
sleep_loss_1
segment_fecal_met
sl
segment_fecal_numeric
1
sex
male
shotgun
no
sixteen_s
yes
stage1min_sp3
not provided
stage1pc_sp3
not provided
stage1pc_sp4
not provided
stage2pc_sp3
not provided
stage2pc_sp4
not provided
stage34min_sp3
not provided
stroop_congruent_medrtc
619.6
stroop_congruent_medrtc_b1
606.5
stroop_congruent_medrtc_changefromb1
13.1
stroop_incongruent_medrtc
869.9333333333333
stroop_incongruent_medrtc_b1
828
stroop_incongruent_medrtc_changefromb1
41.93333333333333
stroop_inhibitorycontrol
250.33333333333334
stroop_inhibitorycontrol_b1
221.5
stroop_inhibitorycontrol_binary
high
stroop_inhibitorycontrol_changefromb1
28.833333333333332
stroop_neutral_medrtc
774.6333333333333
stroop_neutral_medrtc_b1
674
stroop_neutral_medrtc_changefromb1
100.63333333333334
stroopincmrtc30
HIGH30
stroopincmrtc35
HIGH35
vas_alert
43.16266666666668
vas_alert_binary
high
visit
2
vs_ct
17.794481177254898
vs_ct_b1
17.202797202797203
vs_ct_changefromb1
0.5916839744576935
vs_medrtc
736.2333333333333
vs_medrtc_b1
730.5
vs_medrtc_changefromb1
5.733333333333333
vs_medrtc_targetabsent
949.2666666666667
vs_medrtc_targetabsent_b1
1052
vs_medrtc_targetabsent_changefromb1
-102.7333333
vs_medrtc_targetpresent
629.7
vs_medrtc_targetpresent_b1
597
vs_medrtc_targetpresent_changefromb1
32.7
vs_missedtargetspc
5.499433214201028
vs_missedtargetspc_b1
10
vs_missedtargetspc_changefromb1
-4.500566786
vs_slopetargetabsent
21.370333333333335
vs_slopetargetabsent_b1
24.855
vs_slopetargetabsent_binary
high
vs_slopetargetabsent_changefromb1
-3.484666667
vs_slopetargetpresent
4.526
vs_slopetargetpresent_b1
2.965
vs_slopetargetpresent_changefromb1
1.5610000000000002
wakeperiod
3
wasosp330
NA
wasosp335
NA
weight_kg
76.8
weight_unit
kg