human gut metagenome
stool sample 16NAVY12_V2
ENA first public
2025-11-21
INSDC center name
UCSDMI
INSDC status
public
Submitter Id
qiita_sid_10513:10513.48832
add_attempted
30.4
add_attempted_b1
34
add_attempted_changefromb1
-3.6
add_corr30
NA
add_corr35
HIGH35
add_correct
28.866666666666667
add_correct_b1
31
add_correct_changefromb1
-2.133333333
add_percent
94.75942742902856
add_percent_b1
91.17647058823529
add_percent_changefromb1
-3.582956841
age
35
age_units
years
anonymized_name
48832_fecal
bmi
23.56
collection date
2016-08-13
collection_time
9:04
collection_timesincesp1wake
26.85
collection_timestamp
2016-08-13 09:04
condition
scd
condition_by_visit
scd_visit2
condition_numeric
2
conjvstargab30
NA
conjvstargab35
NA
country
USA
cptcort30
HIGH30
cptcort35
HIGH35
cytokinecluster
3
dna_extracted
TRUE
elevation
1629
empo_1
Host-associated
empo_2
Host-associated (non-saline)
empo_3
Animal (non-saline)
empo_4
Animal distal gut (non-saline)
env_biome
urban biome
env_feature
human-associated habitat
env_material
fecal material
env_package
human-gut
fast_duration_hrs
not provided
fecalmicrobiomebetadiv30
HIGH30
fecalmicrobiomebetadiv35
HIGH35
fronzenimmediately
yes
geo_loc_name
USA:CO:Boulder
geographic location (country and/or sea)
USA
height
169.5
height_unit
cm
hemolysed
not applicable
host scientific name
Homo sapiens
host_age
35
host_age_units
years
host_body_habitat
UBERON:feces
host_body_mass_index
23.56
host_body_product
UBERON:feces
host_body_site
UBERON:feces
host_common_name
human
host_height
169.5
host_height_units
cm
host_life_stage
adult
host_subject_id
16NAVY12
host_subject_id_letter
j
host_taxid
9606
host_weight
67.7
host_weight_units
kg
kss_beginning
7.133333333333334
kss_beginning_b1
2
kss_beginning_changefromb1
5.133333333333334
kss_end
7.8
kss_end_b1
4
kss_end_changefromb1
3.8
kss_middle
7.533333333333333
kss_middle_b1
2
kss_middle_changefromb1
5.533333333333333
latitude
40.1
longitude
-107.2
metabolomics
yes
ms_experiment
01
ms_filename
16navy12.v2.20160813.mzxml
ms_plate_position
1_b08
ms_runorder
23
mwt30
HIGH30
mwt35
HIGH35
mwt_sol1stepochsleep
14.181818181818182
mwt_sol1stepochsleep_binary
high
mwtmin
HIGH14min
nas_beginning
28.434374999999996
nas_beginning_b1
20.156250000000004
nas_beginning_changefromb1
8.278124999999996
nas_end
31.833125000000003
nas_end_b1
63.73125000000001
nas_end_changefromb1
-31.898125
pas_beginning
221.3875
pas_beginning_b1
520.584375
pas_beginning_changefromb1
-299.196875
pas_end
172.78124999999997
pas_end_b1
421.9593750000001
pas_end_changefromb1
-249.178125
physical_specimen_location
CU Boulder_Wright Lab
physical_specimen_remaining
TRUE
plasma_sample
not applicable
plasma_sample_1_10
not applicable
plasma_sample_reltime
not applicable
psg_finalstageawakening_sp3
not provided
psg_finalstageawakening_sp4
not provided
psg_remlfromsol10min_sp3
not provided
psg_remlfromsol10min_sp4
not provided
psg_remlfromsol3min_sp3
not provided
psg_remlfromsol3min_sp4
not provided
psg_remmin_sp3
not provided
psg_remmin_sp4
not provided
psg_rempc_sp3
not provided
psg_rempc_sp4
not provided
psg_se_sp3
not provided
psg_se_sp4
not provided
psg_sol10_10min_sp3
not provided
psg_sol10_10min_sp4
not provided
psg_sol3_1p5min_sp3
not provided
psg_sol3_1p5min_sp4
not provided
psg_stage1min_sp3
not provided
psg_stage1min_sp4
not provided
psg_stage1pc_sp3
not provided
psg_stage1pc_sp4
not provided
psg_stage2min_sp3
not provided
psg_stage2min_sp4
not provided
psg_stage2pc_sp3
not provided
psg_stage2pc_sp4
not provided
psg_stage34min_sp3
not provided
psg_stage34min_sp4
not provided
psg_stage34pc_sp3
not provided
psg_stage34pc_sp4
not provided
psg_swslfromsol10_10min_sp3
not provided
psg_swslfromsol10_10min_sp4
not provided
psg_swslfromsol3_1p5min_sp3
not provided
psg_swslfromsol3_1p5min_sp4
not provided
psg_totalrecordingtime_sp3
not provided
psg_totalrecordingtime_sp4
not provided
psg_totalwakemin_sp3
not provided
psg_totalwakemin_sp4
not provided
psg_totalwakepc_sp3
not provided
psg_totalwakepc_sp4
not provided
psg_tst_sp3
not provided
psg_tst_sp4
not provided
psg_wasofromsol10min_sp3
not provided
psg_wasofromsol10min_sp4
not provided
psg_wasofromsol3min_sp3
not provided
psg_wasofromsol3min_sp4
not provided
pvt_1overmeanrt
0.002736625
pvt_1overmeanrt_b1
0.003419111
pvt_1overmeanrt_binary
low
pvt_1overmeanrt_changefromb1
-6.82E-04
pvt_1overmedrt
0.002999482
pvt_1overmedrt_b1
0.003649635
pvt_1overmedrt_changefromb1
-6.50E-04
pvt_1overslowestrt
0.001576696
pvt_1overslowestrt_b1
0.002305328
pvt_1overslowestrt_binary
high
pvt_1overslowestrt_changefromb1
-7.29E-04
pvt_anticipated
0.3333333333333333
pvt_anticipations_b1
0
pvt_anticipations_changefromb1
0.3333333333333333
pvt_fastestrt
247.20537333333334
pvt_fastestrt_b1
213.11110000000005
pvt_fastestrt_binary
high
pvt_fastestrt_changefromb1
34.09427333333335
pvt_lapses
10.2
pvt_lapses_b1
0
pvt_lapses_binary
high
pvt_lapses_changefromb1
10.2
pvt_logstdrt
2.076763287293074
pvt_logstdrt_b1
1.8174503356964031
pvt_logstdrt_binary
low
pvt_logstdrt_changefromb1
0.25931295159667106
pvtlapses30
LOW30
pvtlapses35
LOW35
qiita_sample_type
feces
remlfromsol3min_sp3
not provided
remlfromsol3min_sp4
not provided
remmin_sp3
not provided
remmin_sp4
not provided
rempc_sp3
not provided
rempc_sp4
not provided
sample name
qiita_sid_10513:10513.48832
sample_type
feces
scientific_name
human gut metagenome
segment_fecal
sleep_loss_1
segment_fecal_2early_mic
not applicable
segment_fecal_2late_mic
not applicable
segment_fecal_3_mic
not applicable
segment_fecal_met
not applicable
segment_fecal_numeric
1
sex
female
shotgun
no
sixteen_s
yes
stage1min_sp3
not provided
stage1pc_sp3
not provided
stage1pc_sp4
not provided
stage2pc_sp3
not provided
stage2pc_sp4
not provided
stage34min_sp3
not provided
stroop_congruent_medrtc
638
stroop_congruent_medrtc_b1
603
stroop_congruent_medrtc_changefromb1
35
stroop_incongruent_medrtc
846.1333333333333
stroop_incongruent_medrtc_b1
851
stroop_incongruent_medrtc_changefromb1
-4.866666667
stroop_inhibitorycontrol
208.13333333333333
stroop_inhibitorycontrol_b1
248
stroop_inhibitorycontrol_binary
high
stroop_inhibitorycontrol_changefromb1
-39.86666667
stroop_neutral_medrtc
753.4666666666667
stroop_neutral_medrtc_b1
678
stroop_neutral_medrtc_changefromb1
75.46666666666667
stroopincmrtc30
HIGH30
stroopincmrtc35
HIGH35
vas_alert
13.622666666666666
vas_alert_binary
NA
visit
2
vs_ct
18.231585783790962
vs_ct_b1
17.483443708609272
vs_ct_changefromb1
0.7481420751816898
vs_medrtc
755.7333333333333
vs_medrtc_b1
851
vs_medrtc_changefromb1
-95.26666667
vs_medrtc_targetabsent
896.3
vs_medrtc_targetabsent_b1
997.5
vs_medrtc_targetabsent_changefromb1
-101.2
vs_medrtc_targetpresent
620.3
vs_medrtc_targetpresent_b1
681.5
vs_medrtc_targetpresent_changefromb1
-61.2
vs_missedtargetspc
2.758354780763744
vs_missedtargetspc_b1
4.545454545454546
vs_missedtargetspc_changefromb1
-1.787099765
vs_slopetargetabsent
18.696666666666665
vs_slopetargetabsent_b1
16.06
vs_slopetargetabsent_binary
high
vs_slopetargetabsent_changefromb1
2.6366666666666685
vs_slopetargetpresent
4.849666666666667
vs_slopetargetpresent_b1
8.985
vs_slopetargetpresent_changefromb1
-4.135333333
wakeperiod
2
wasosp330
HIGH30
wasosp335
HIGH35
weight_kg
67.7
weight_unit
kg