uncultured Corynebacterium sp.
This sample represents a binned metagenome assembled from the metagenomic runs SRR1631378, SRR1631379, SRR1631380, SRR1631381, SRR1631382, SRR1631383, SRR1631384 of study SRP002480.
INSDC center name
NIH/NHGRI
Submitter Id
SAMPLE_287_bin.1
assembly quality
Many fragments with little to no review of assembly other than reporting of standard assembly statistics
assembly software
metaSPAdes_v3.13.0
binning parameters
--maxbin2 --metabat2 --concoct
binning software
metaWRAP_v1.2.1
broad-scale environmental context
human skin
collection date
2013-01-17
completeness score
98.53
completeness software
CheckM_v1.1.2
contamination score
0.68
environmental medium
Ss
geographic location (country and/or sea)
USA
geographic location (latitude)
38.984652
geographic location (longitude)
-77.094709
investigation type
metagenome-assembled genome
isolation_source
human skin metagenome
local environmental context
Ic-R
metagenomic source
human skin metagenome
project name
Metagenomic assemblies and bins underlying the Skin Microbial Genome Catalogue
sample derived from
SRS731558
sample name
SAMPLE_287_bin.1
scientific_name
uncultured Corynebacterium sp.
sequencing method
Illumina HiSeq 2000
taxonomic identity marker
multi-marker approach