human gut metagenome
stool sample 16NAVY04_V2
ENA first public
2025-11-21
INSDC center name
UCSDMI
INSDC status
public
Submitter Id
qiita_sid_10513:10513.42141
add_attempted
17.8
add_attempted_b1
18
add_attempted_changefromb1
-0.2
add_corr30
LOW30
add_corr35
LOW35
add_correct
16.733333333333334
add_correct_b1
17
add_correct_changefromb1
-0.266666667
add_percent
94.00465757534901
add_percent_b1
94.44444444444444
add_percent_changefromb1
0.4397868690954283
age
29
age_units
years
anonymized_name
42141_fecal
bmi
21.1
collection date
2016-02-21
collection_time
11:00
collection_timesincesp1wake
74.28
collection_timestamp
2016-02-21 11:00
condition
scd
condition_by_visit
scd_visit2
condition_numeric
2
conjvstargab30
LOW30
conjvstargab35
LOW35
country
USA
cptcort30
HIGH30
cptcort35
HIGH35
cytokinecluster
1
dna_extracted
TRUE
elevation
1629
empo_1
Host-associated
empo_2
Host-associated (non-saline)
empo_3
Animal (non-saline)
empo_4
Animal distal gut (non-saline)
env_biome
urban biome
env_feature
human-associated habitat
env_material
fecal material
env_package
human-gut
fast_duration_hrs
not provided
fecalmicrobiomebetadiv30
HIGH30
fecalmicrobiomebetadiv35
HIGH35
geo_loc_name
USA:CO:Boulder
geographic location (country and/or sea)
USA
height
181.2
height_unit
cm
hemolysed
not applicable
host scientific name
Homo sapiens
host_age
29
host_age_units
years
host_body_habitat
UBERON:feces
host_body_mass_index
21.1
host_body_product
UBERON:feces
host_body_site
UBERON:feces
host_common_name
human
host_height
181.2
host_height_units
cm
host_life_stage
adult
host_subject_id
16NAVY04
host_subject_id_letter
c
host_taxid
9606
host_weight
69.4
host_weight_units
kg
kss_beginning
6.733333333333333
kss_beginning_b1
4
kss_beginning_changefromb1
2.7333333333333334
kss_end
6.333333333333333
kss_end_b1
5
kss_end_changefromb1
1.3333333333333333
kss_middle
6.666666666666667
kss_middle_b1
4
kss_middle_changefromb1
2.6666666666666665
latitude
40.1
longitude
-107.2
metabolomics
yes
missedtargetspc_changefromb1
2
ms_experiment
01
ms_filename
16navy04.v2.20161231.mzxml
ms_plate_position
1_f11
ms_runorder
79
mwt30
LOW30
mwt35
LOW35
mwt_sol1stepochsleep
9.9
mwt_sol1stepochsleep_12
lessthanorequalto12
mwt_sol1stepochsleep_8
morethan8min
mwt_sol1stepochsleep_binary
low
mwt_sol1stepochstage2
10.4
mwtmin
LOW10min
nas_beginning
23.026874999999997
nas_beginning_b1
14.193749999999994
nas_beginning_changefromb1
8.833125
nas_end
27.7825
nas_end_b1
26.906249999999993
nas_end_changefromb1
0.8762499999999971
pas_beginning
93.53
pas_beginning_b1
152.11875000000003
pas_beginning_changefromb1
-43.715
pas_end
130.11187499999997
pas_end_b1
146.015625
pas_end_changefromb1
-0.603125
physical_specimen_location
CU Boulder_Wright Lab
physical_specimen_remaining
TRUE
plasma_sample
not applicable
plasma_sample_1_10
not applicable
plasma_sample_reltime
not applicable
psg_finalstageawakening_sp3
2
psg_finalstageawakening_sp4
r
psg_remlfromsol10min_sp3
59.5
psg_remlfromsol10min_sp4
74.5
psg_remlfromsol3min_sp3
59.5
psg_remlfromsol3min_sp4
77.5
psg_remmin_sp3
42.5
psg_remmin_sp4
30.5
psg_rempc_sp3
0.235457064
psg_rempc_sp4
0.17
psg_se_sp3
0.922437673
psg_se_sp4
0.9
psg_sol10_10min_sp3
4.5
psg_sol10_10min_sp4
7
psg_sol3_1p5min_sp3
4.5
psg_sol3_1p5min_sp4
4
psg_stage1min_sp3
18
psg_stage1min_sp4
13
psg_stage1pc_sp3
0.099722992
psg_stage1pc_sp4
0.07
psg_stage2min_sp3
90.5
psg_stage2min_sp4
85
psg_stage2pc_sp3
0.501385042
psg_stage2pc_sp4
0.47
psg_stage34min_sp3
15.5
psg_stage34min_sp4
33.5
psg_stage34pc_sp3
0.085872576
psg_stage34pc_sp4
0.19
psg_swslfromsol10_10min_sp3
17
psg_swslfromsol10_10min_sp4
20.5
psg_swslfromsol3_1p5min_sp3
17
psg_swslfromsol3_1p5min_sp4
23.5
psg_totalrecordingtime_sp3
180.5
psg_totalrecordingtime_sp4
180
psg_totalwakemin_sp3
14
psg_totalwakemin_sp4
18
psg_totalwakepc_sp3
0.077562327
psg_totalwakepc_sp4
0.1
psg_tst_sp3
166.5
psg_tst_sp4
162
psg_wasofromsol10min_sp3
9.5
psg_wasofromsol10min_sp4
13
psg_wasofromsol3min_sp3
9.5
psg_wasofromsol3min_sp4
14
pvt_1overmeanrt
0.003165673
pvt_1overmeanrt_b1
0.003641061
pvt_1overmeanrt_binary
high
pvt_1overmeanrt_changefromb1
-4.75E-04
pvt_1overmedrt
0.00357549
pvt_1overmedrt_b1
0.003846154
pvt_1overmedrt_changefromb1
-2.71E-04
pvt_1overslowestrt
0.001601742
pvt_1overslowestrt_b1
0.002441009
pvt_1overslowestrt_binary
high
pvt_1overslowestrt_changefromb1
-8.39E-04
pvt_anticipated
5
pvt_anticipations_b1
1
pvt_anticipations_changefromb1
4
pvt_fastestrt
196.09259166666666
pvt_fastestrt_b1
206.6667
pvt_fastestrt_binary
NA
pvt_fastestrt_changefromb1
-10.57410833
pvt_lapses
7.583333333333333
pvt_lapses_b1
1
pvt_lapses_binary
low
pvt_lapses_changefromb1
6.583333333333333
pvt_logstdrt
2.142088770189801
pvt_logstdrt_b1
1.774754120640235
pvt_logstdrt_binary
low
pvt_logstdrt_changefromb1
0.36733465
pvtlapses30
LOW30
pvtlapses35
LOW35
qiita_sample_type
feces
remlfromsol3min_sp3
59.5
remlfromsol3min_sp4
77.5
remmin_sp3
42.5
remmin_sp4
30.5
rempc_sp3
0.235457064
rempc_sp4
0.17
sample name
qiita_sid_10513:10513.42141
sample_type
feces
scientific_name
human gut metagenome
segment_fecal
sleep_loss_2
segment_fecal_2early_mic
not applicable
segment_fecal_2late_mic
sl
segment_fecal_3_mic
sleep_loss_2
segment_fecal_met
not applicable
segment_fecal_numeric
2
segment_fecal_shotgun
sl
sex
male
shotgun
yes
sixteen_s
yes
stage1min_sp3
18
stage1pc_sp3
0.099722992
stage1pc_sp4
0.07
stage2pc_sp3
0.501385042
stage2pc_sp4
0.47
stage34min_sp3
15.5
stroop_congruent_medrtc
634.5333333333333
stroop_congruent_medrtc_b1
766.5
stroop_congruent_medrtc_changefromb1
-131.9666667
stroop_incongruent_medrtc
809.2333333333333
stroop_incongruent_medrtc_b1
869.5
stroop_incongruent_medrtc_changefromb1
-60.26666667
stroop_inhibitorycontrol
174.7
stroop_inhibitorycontrol_b1
103
stroop_inhibitorycontrol_binary
high
stroop_inhibitorycontrol_changefromb1
71.7
stroop_neutral_medrtc
685.8666666666667
stroop_neutral_medrtc_b1
845
stroop_neutral_medrtc_changefromb1
-159.1333333
stroopincmrtc30
HIGH30
stroopincmrtc35
HIGH35
vas_alert
40.48266666666667
vas_alert_binary
high
visit
2
vs_ct
18.47397536680607
vs_ct_b1
17.95774647887324
vs_ct_changefromb1
0.5162288879328307
vs_medrtc
646.8666666666667
vs_medrtc_b1
699
vs_medrtc_changefromb1
-52.13333333
vs_medrtc_targetabsent
697.4
vs_medrtc_targetabsent_b1
723
vs_medrtc_targetabsent_changefromb1
-25.6
vs_medrtc_targetpresent
601.4666666666667
vs_medrtc_targetpresent_b1
657
vs_medrtc_targetpresent_changefromb1
-55.53333333
vs_missedtargetspc
4.029219714
vs_missedtargetspc_b1
2.2222222222222223
vs_missedtargetspc_changefromb1
1.8069974919590268
vs_slopetargetabsent
8.010333333333334
vs_slopetargetabsent_b1
7.25
vs_slopetargetabsent_binary
low
vs_slopetargetabsent_changefromb1
0.7603333333333334
vs_slopetargetpresent
1.597
vs_slopetargetpresent_b1
0.88
vs_slopetargetpresent_changefromb1
0.7170000000000001
wasosp330
NA
wasosp335
NA
weight_kg
69.4
weight_unit
kg