Lawsonella clevelandensis
This sample represents a binned metagenome assembled from the metagenomic run SRR11242345 of study SRP251660.
INSDC center name
NIH/NHGRI
Submitter Id
SAMPLE_898_bin.2
assembly quality
Multiple fragments where gaps span repetitive regions. Presence of the 23S, 16S, and 5S rRNA genes and at least 18 tRNAs
assembly software
metaSPAdes_v3.13.0
binning parameters
--maxbin2 --metabat2 --concoct
binning software
metaWRAP_v1.2.1
broad-scale environmental context
human skin
collection date
2016-11
completeness score
93.82
completeness software
CheckM_v1.1.2
contamination score
0.0
environmental medium
Skin
geographic location (country and/or sea)
China
geographic location (latitude)
missing: third party data
geographic location (longitude)
missing: third party data
investigation type
metagenome-assembled genome
isolation_source
human skin metagenome
local environmental context
Cheek
metagenomic source
human skin metagenome
project name
Metagenomic assemblies and bins underlying the Skin Microbial Genome Catalogue
sample derived from
SRS6263461
sample name
SAMPLE_898_bin.2
scientific_name
Lawsonella clevelandensis
sequencing method
Illumina NovaSeq 6000
taxonomic identity marker
multi-marker approach