Congregibacter sp.
16S recovered
Yes
16S recovery software
PROKKA (version 1.14.6)
ENA first public
2025-04-07
GAL
Nova Southeastern University
GAL_sample_id
NOT PROVIDED
INSDC center name
Tree of Life Programme
INSDC status
public
MAG coverage software
Minimap2 (version 2.24-r1122)
Submitter Id
9640f62c-b396-4456-97c2-a1e016cd84d5
assembly quality
Many fragments with little to no review of assembly other than reporting of standard assembly statistics
assembly software
metaMDBG (version 0.3)
binning parameters
coverage
binning software
MaxBin (version 2.2.7); DASTOOL (version 1.1.5)
broad-scale environmental context
aquatic biome
collected_by
NIKOLOAS SCHIZAS| JAAZIEL GARCIA HERNANDEZ| ALEJANDRO GONZALEZ| MARIA DEL PILAR| DANIEL TOLEDO
collecting institution
UNIVERSITY OF PUERTO RICO MAYAGUEZ
collection date
2021-05-10
completeness score
57.99
completeness software
checkM (version 1.2.2); checkM_DB (release 2015-01-16)
contamination score
4.81
environmental medium
adult hydrozoan tissue
geographic location (country and/or sea)
Puerto Rico
geographic location (depth)
1.0
geographic location (latitude)
17.96
geographic location (longitude)
-67.05
geographic location (region and locality)
Cayo Enrique
habitat
coral reef
host life stage
adult
host scientific name
Millepora alcicornis
host sex
not collected
host taxid
544493
identified_by
NIKOLOAS SCHIZAS| JAAZIEL GARCIA HERNANDEZ| ALEJANDRO GONZALEZ
identifier_affiliation
UNIVERSITY OF PUERTO RICO MAYAGUEZ
investigation type
metagenome-assembled genome
isolation_source
Hydrozoan: Millepora alcicornis
local environmental context
marine biome
metagenomic source
hydrozoan metagenome
number of standard tRNAs extracted
32
organism part
WHOLE ORGANISM
project name
ASG
sample derived from
SAMEA117984123
sample name
9640f62c-b396-4456-97c2-a1e016cd84d5
scientific_name
Congregibacter sp.
sequencing method
Pacbio Sequel II
specimen_id
NSU0054605
specimen_voucher
Sanger Institute Genome PR20
tRNA extraction software
PROKKA (version 1.14.6)
taxonomic classification
GTDB-TK (version 2.4.0); GTDB (release 214)
taxonomic identity marker
taxonomic classification fully defined by topology
tolid
jhMilAlci5.Congregibacter_sp_1