Cutibacterium acnes
This sample represents a binned metagenome assembled from the metagenomic run SRR1647298 of study SRP049645.
INSDC center name
NIH/NHGRI
Submitter Id
SAMPLE_1608_bin.1
assembly quality
Many fragments with little to no review of assembly other than reporting of standard assembly statistics
assembly software
metaSPAdes_v3.13.0
binning parameters
--maxbin2 --metabat2 --concoct
binning software
metaWRAP_v1.2.1
broad-scale environmental context
human skin
collection date
2013-09-13
completeness score
67.77
completeness software
CheckM_v1.1.2
contamination score
0.33
environmental medium
missing: third party data
geographic location (country and/or sea)
missing: third party data
geographic location (latitude)
missing: third party data
geographic location (longitude)
missing: third party data
investigation type
metagenome-assembled genome
isolation_source
human skin metagenome
local environmental context
Ra
metagenomic source
human skin metagenome
project name
Metagenomic assemblies and bins underlying the Skin Microbial Genome Catalogue
sample derived from
SRS741617
sample name
SAMPLE_1608_bin.1
scientific_name
Cutibacterium acnes
sequencing method
Illumina HiSeq 2500
taxonomic identity marker
multi-marker approach