Escherichia coli
MAG_42 in XJRt.1087
ENA first public
2025-05-25
INSDC center name
State Key Laboratory of Pathogen and Biosecurity
INSDC status
public
Submitter Id
XJRt.1087_MAG_42
assembly software
Megahit
binning parameters
jgi_summarize_bam_contig_depths --outputDepth & metabat2 -a depth.txt
binning software
metaBAT2
broad-scale environmental context
not collected
collection date
2019-05-22
common name
E. coli
completeness score
95
completeness software
Checkm
contamination score
0
environmental medium
not collected
geographic location (country and/or sea)
China
geographic location (latitude)
34.8977
geographic location (longitude)
114.8977
isolation_source
Rhipicephalus turanicus sample XJRt.1087
local environmental context
not collected
metagenomic source
This sample represents a metagenomic bin from the metagenomic sample ERS24615360
project name
PRJEB89768
sample derived from
ERS24615360
sample name
XJRt.1087_MAG_42
scientific_name
Escherichia coli