human gut metagenome
stool sample 18NAVY30_V1
ENA first public
2025-11-21
INSDC center name
UCSDMI
INSDC status
public
Submitter Id
qiita_sid_10513:10513.66087
add_attempted
17.8
add_attempted_b1
17
add_attempted_changefromb1
0.8
add_corr30
LOW30
add_corr35
LOW35
add_correct
17.2
add_correct_b1
14
add_correct_changefromb1
3.2
add_percent
95.02691633929112
add_percent_b1
82.35294117647058
add_percent_changefromb1
-12.67397516
age
28
age_units
years
anonymized_name
66087_fecal
bmi
21.9
collection date
2018-01-28
collection_time
9:47
collection_timesincesp1wake
50.8
collection_timestamp
2018-01-28 09:47
condition
scd
condition_by_visit
scd_visit1
condition_numeric
2
conjvstargab30
LOW30
conjvstargab35
LOW35
country
USA
cptcort30
LOW30
cptcort35
LOW35
cytokinecluster
2
dna_extracted
TRUE
elevation
1629
empo_1
Host-associated
empo_2
Host-associated (non-saline)
empo_3
Animal (non-saline)
empo_4
Animal distal gut (non-saline)
env_biome
urban biome
env_feature
human-associated habitat
env_material
fecal material
env_package
human-gut
fast_duration_hrs
not provided
fecalmicrobiomebetadiv30
LOW30
fecalmicrobiomebetadiv35
LOW35
fronzenimmediately
yes
geo_loc_name
USA:CO:Boulder
geographic location (country and/or sea)
USA
height
183.5
height_unit
cm
hemolysed
not applicable
host scientific name
Homo sapiens
host_age
28
host_age_units
years
host_body_habitat
UBERON:feces
host_body_mass_index
21.9
host_body_product
UBERON:feces
host_body_site
UBERON:feces
host_common_name
human
host_height
183.5
host_height_units
cm
host_life_stage
adult
host_subject_id
18NAVY30
host_subject_id_letter
r
host_taxid
9606
host_weight
73.8
host_weight_units
kg
kss_beginning
5.866666666666666
kss_beginning_b1
4
kss_beginning_changefromb1
1.8666666666666667
kss_end
6
kss_end_b1
5
kss_end_changefromb1
1
kss_middle
6.133333333333334
kss_middle_b1
5
kss_middle_changefromb1
1.1333333333333333
latitude
40.1
longitude
-107.2
metabolomics
yes
missedtargetspc_changefromb1
0
ms_experiment
01
ms_filename
18navy30.v1.20180128.mzxml
ms_plate_position
1_c08
ms_runorder
36
mwt30
HIGH30
mwt35
HIGH35
mwt_sol1stepochsleep
15.333333333333334
mwt_sol1stepochsleep_12
morethan12min
mwt_sol1stepochsleep_8
morethan8min
mwt_sol1stepochsleep_binary
high
mwt_sol1stepochstage2
18.16666667
mwtmin
HIGH14min
nas_beginning
132.455
nas_beginning_b1
3.215625
nas_beginning_changefromb1
129.239375
nas_end
188.150625
nas_end_b1
11.053125
nas_end_changefromb1
177.0975
pas_beginning
380.025625
pas_beginning_b1
751.6687500000002
pas_beginning_changefromb1
-371.643125
pas_end
394.4424999999999
pas_end_b1
538.1062499999998
pas_end_changefromb1
-143.66375
physical_specimen_location
CU Boulder_Wright Lab
physical_specimen_remaining
TRUE
plasma_sample
not applicable
plasma_sample_1_10
not applicable
plasma_sample_reltime
not applicable
psg_finalstageawakening_sp3
w
psg_finalstageawakening_sp4
2
psg_remlfromsol10min_sp3
12.5
psg_remlfromsol10min_sp4
59
psg_remlfromsol3min_sp3
68
psg_remlfromsol3min_sp4
59
psg_remmin_sp3
50
psg_remmin_sp4
18.5
psg_rempc_sp3
0.277777778
psg_rempc_sp4
0.102777778
psg_se_sp3
0.611111111
psg_se_sp4
0.958333333
psg_sol10_10min_sp3
65
psg_sol10_10min_sp4
5.5
psg_sol3_1p5min_sp3
9.5
psg_sol3_1p5min_sp4
5.5
psg_stage1min_sp3
8
psg_stage1min_sp4
3.5
psg_stage1pc_sp3
0.044444444
psg_stage1pc_sp4
0.019444444
psg_stage2min_sp3
36.5
psg_stage2min_sp4
84.5
psg_stage2pc_sp3
0.202777778
psg_stage2pc_sp4
0.469444444
psg_stage34min_sp3
15.5
psg_stage34min_sp4
66
psg_stage34pc_sp3
0.086111111
psg_stage34pc_sp4
0.366666667
psg_swslfromsol10_10min_sp3
24
psg_swslfromsol10_10min_sp4
8.5
psg_swslfromsol3_1p5min_sp3
79.5
psg_swslfromsol3_1p5min_sp4
8.5
psg_totalrecordingtime_sp3
180
psg_totalrecordingtime_sp4
180
psg_totalwakemin_sp3
70
psg_totalwakemin_sp4
7.5
psg_totalwakepc_sp3
0.388888889
psg_totalwakepc_sp4
0.041666667
psg_tst_sp3
110
psg_tst_sp4
172.5
psg_wasofromsol10min_sp3
11
psg_wasofromsol10min_sp4
3
psg_wasofromsol3min_sp3
60.5
psg_wasofromsol3min_sp4
3
pvt_1overmeanrt
0.003480897
pvt_1overmeanrt_b1
0.003856858
pvt_1overmeanrt_binary
high
pvt_1overmeanrt_changefromb1
-3.76E-04
pvt_1overmedrt
0.003713357
pvt_1overmedrt_b1
0.004016064
pvt_1overmedrt_changefromb1
-3.03E-04
pvt_1overslowestrt
0.002206115
pvt_1overslowestrt_b1
0.002554641
pvt_1overslowestrt_binary
high
pvt_1overslowestrt_changefromb1
-3.49E-04
pvt_anticipated
1.3333333333333333
pvt_anticipations_b1
2
pvt_anticipations_changefromb1
-0.666666667
pvt_fastestrt
212.1588933333333
pvt_fastestrt_b1
205.66669999999993
pvt_fastestrt_binary
low
pvt_fastestrt_changefromb1
6.492193333333345
pvt_lapses
2.2666666666666666
pvt_lapses_b1
1
pvt_lapses_binary
low
pvt_lapses_changefromb1
1.2666666666666666
pvt_logstdrt
1.8930664707505644
pvt_logstdrt_b1
1.9241691474250893
pvt_logstdrt_binary
low
pvt_logstdrt_changefromb1
-0.031102677
pvtlapses30
LOW30
pvtlapses35
LOW35
qiita_sample_type
feces
remlfromsol3min_sp3
68
remlfromsol3min_sp4
59
remmin_sp3
50
remmin_sp4
18.5
rempc_sp3
0.277777778
rempc_sp4
0.102777778
sample name
qiita_sid_10513:10513.66087
sample_type
feces
scientific_name
human gut metagenome
segment_fecal
sleep_loss_2
segment_fecal_2early_mic
sl
segment_fecal_2late_mic
sl
segment_fecal_3_mic
sleep_loss_1
segment_fecal_met
sl
segment_fecal_numeric
2
segment_fecal_shotgun
sl
sex
male
shotgun
yes
sixteen_s
yes
stage1min_sp3
8
stage1pc_sp3
0.044444444
stage1pc_sp4
0.019444444
stage2pc_sp3
0.202777778
stage2pc_sp4
0.469444444
stage34min_sp3
15.5
stroop_congruent_medrtc
525.2333333333333
stroop_congruent_medrtc_b1
not applicable
stroop_congruent_medrtc_changefromb1
not applicable
stroop_incongruent_medrtc
646.9
stroop_incongruent_medrtc_b1
not applicable
stroop_incongruent_medrtc_changefromb1
not applicable
stroop_inhibitorycontrol
121.66666666666667
stroop_inhibitorycontrol_b1
not applicable
stroop_inhibitorycontrol_binary
low
stroop_inhibitorycontrol_changefromb1
not applicable
stroop_neutral_medrtc
557.4333333333333
stroop_neutral_medrtc_b1
not applicable
stroop_neutral_medrtc_changefromb1
not applicable
stroopincmrtc30
LOW30
stroopincmrtc35
LOW35
vas_alert
36.452
vas_alert_binary
low
visit
1
vs_ct
18.781975726602834
vs_ct_b1
17.849462365591396
vs_ct_changefromb1
0.9325133610114371
vs_medrtc
539.1333333333333
vs_medrtc_b1
641
vs_medrtc_changefromb1
-101.8666667
vs_medrtc_targetabsent
578.8666666666667
vs_medrtc_targetabsent_b1
689
vs_medrtc_targetabsent_changefromb1
-110.1333333
vs_medrtc_targetpresent
492.4
vs_medrtc_targetpresent_b1
593
vs_medrtc_targetpresent_changefromb1
-100.6
vs_missedtargetspc
11.053286622800183
vs_missedtargetspc_b1
11.538461538461538
vs_missedtargetspc_changefromb1
-0.485174916
vs_slopetargetabsent
2.788333333333333
vs_slopetargetabsent_b1
7.49
vs_slopetargetabsent_binary
low
vs_slopetargetabsent_changefromb1
-4.701666667
vs_slopetargetpresent
2.9876666666666667
vs_slopetargetpresent_b1
4.75
vs_slopetargetpresent_changefromb1
-1.762333333
wakeperiod
3
wasosp330
HIGH30
wasosp335
HIGH35
weight_kg
73.8
weight_unit
kg