human gut metagenome
stool sample 17NAVY18_V1
ENA first public
2025-11-21
INSDC center name
UCSDMI
INSDC status
public
Submitter Id
qiita_sid_10513:10513.62795
add_attempted
33.75
add_attempted_b1
not applicable
add_attempted_changefromb1
not applicable
add_corr30
HIGH30
add_corr35
HIGH35
add_correct
32
add_correct_b1
not applicable
add_correct_changefromb1
not applicable
add_percent
94.69977439788669
add_percent_b1
not applicable
add_percent_changefromb1
not applicable
age
23
age_units
years
anonymized_name
62795_fecal
bmi
20.16
collection date
2017-02-12
collection_time
7:01
collection_timesincesp1wake
47.92
collection_timestamp
2017-02-12 07:01
condition
scd
condition_by_visit
scd_visit1
condition_numeric
2
conjvstargab30
LOW30
conjvstargab35
LOW35
country
USA
cptcort30
HIGH30
cptcort35
HIGH35
cytokinecluster
2
dna_extracted
TRUE
elevation
1629
empo_1
Host-associated
empo_2
Host-associated (non-saline)
empo_3
Animal (non-saline)
empo_4
Animal distal gut (non-saline)
env_biome
urban biome
env_feature
human-associated habitat
env_material
fecal material
env_package
human-gut
fast_duration_hrs
not provided
fecalmicrobiomebetadiv30
LOW30
fecalmicrobiomebetadiv35
LOW35
fronzenimmediately
yes
geo_loc_name
USA:CO:Boulder
geographic location (country and/or sea)
USA
height
174
height_unit
cm
hemolysed
not applicable
host scientific name
Homo sapiens
host_age
23
host_age_units
years
host_body_habitat
UBERON:feces
host_body_mass_index
20.16
host_body_product
UBERON:feces
host_body_site
UBERON:feces
host_common_name
human
host_height
174
host_height_units
cm
host_life_stage
adult
host_subject_id
17NAVY18
host_subject_id_letter
m
host_taxid
9606
host_weight
61.2
host_weight_units
kg
kss_beginning
5.785714285714286
kss_beginning_b1
not applicable
kss_beginning_changefromb1
not applicable
kss_end
6.285714285714286
kss_end_b1
not applicable
kss_end_changefromb1
not applicable
kss_middle
6.461538461538462
kss_middle_b1
not applicable
kss_middle_changefromb1
not applicable
latitude
40.1
longitude
-107.2
metabolomics
yes
ms_experiment
01
ms_filename
17navy18.v1.20170212.mzxml
ms_plate_position
1_d07
ms_runorder
48
mwt30
HIGH30
mwt35
HIGH35
mwt_sol1stepochsleep
13.8
mwt_sol1stepochsleep_binary
high
mwtmin
HIGH14min
nas_beginning
1.8276923076923082
nas_beginning_b1
not applicable
nas_beginning_changefromb1
not applicable
nas_end
2.8100000000000005
nas_end_b1
not applicable
nas_end_changefromb1
not applicable
pas_beginning
364.59461538461534
pas_beginning_b1
not applicable
pas_beginning_changefromb1
not applicable
pas_end
342.9
pas_end_b1
not applicable
pas_end_changefromb1
not applicable
physical_specimen_location
CU Boulder_Wright Lab
physical_specimen_remaining
TRUE
plasma_sample
not applicable
plasma_sample_1_10
not applicable
plasma_sample_reltime
not applicable
psg_finalstageawakening_sp3
2
psg_finalstageawakening_sp4
2
psg_remlfromsol10min_sp3
57
psg_remlfromsol10min_sp4
50.5
psg_remlfromsol3min_sp3
82.5
psg_remlfromsol3min_sp4
57.5
psg_remmin_sp3
11
psg_remmin_sp4
31
psg_rempc_sp3
0.061797753
psg_rempc_sp4
0.17
psg_se_sp3
0.719101124
psg_se_sp4
0.97
psg_sol10_10min_sp3
34.5
psg_sol10_10min_sp4
11
psg_sol3_1p5min_sp3
9
psg_sol3_1p5min_sp4
4
psg_stage1min_sp3
5.5
psg_stage1min_sp4
7.5
psg_stage1pc_sp3
0.030898876
psg_stage1pc_sp4
0.04
psg_stage2min_sp3
81.5
psg_stage2min_sp4
77.5
psg_stage2pc_sp3
0.457865169
psg_stage2pc_sp4
0.43
psg_stage34min_sp3
30
psg_stage34min_sp4
58.5
psg_stage34pc_sp3
0.168539326
psg_stage34pc_sp4
0.32
psg_swslfromsol10_10min_sp3
13
psg_swslfromsol10_10min_sp4
6
psg_swslfromsol3_1p5min_sp3
38.5
psg_swslfromsol3_1p5min_sp4
13
psg_totalrecordingtime_sp3
178
psg_totalrecordingtime_sp4
180.5
psg_totalwakemin_sp3
50
psg_totalwakemin_sp4
6
psg_totalwakepc_sp3
0.280898876
psg_totalwakepc_sp4
0.03
psg_tst_sp3
128
psg_tst_sp4
174.5
psg_wasofromsol10min_sp3
18
psg_wasofromsol10min_sp4
0.5
psg_wasofromsol3min_sp3
41
psg_wasofromsol3min_sp4
2
pvt_1overmeanrt
0.002890921
pvt_1overmeanrt_b1
not applicable
pvt_1overmeanrt_binary
high
pvt_1overmeanrt_changefromb1
not applicable
pvt_1overmedrt
0.003254183
pvt_1overmedrt_b1
not applicable
pvt_1overmedrt_changefromb1
not applicable
pvt_1overslowestrt
0.00177642
pvt_1overslowestrt_b1
not applicable
pvt_1overslowestrt_binary
high
pvt_1overslowestrt_changefromb1
not applicable
pvt_anticipated
1.3846153846153846
pvt_anticipations_b1
not applicable
pvt_anticipations_changefromb1
not applicable
pvt_fastestrt
229.4324769230769
pvt_fastestrt_b1
not applicable
pvt_fastestrt_binary
low
pvt_fastestrt_changefromb1
not applicable
pvt_lapses
5.3076923076923075
pvt_lapses_b1
not applicable
pvt_lapses_binary
low
pvt_lapses_changefromb1
not applicable
pvt_logstdrt
2.058373989759625
pvt_logstdrt_b1
not applicable
pvt_logstdrt_binary
low
pvt_logstdrt_changefromb1
not applicable
pvtlapses30
NA
pvtlapses35
NA
qiita_sample_type
feces
remlfromsol3min_sp3
82.5
remlfromsol3min_sp4
57.5
remmin_sp3
11
remmin_sp4
31
rempc_sp3
0.061797753
rempc_sp4
0.17
sample name
qiita_sid_10513:10513.62795
sample_type
feces
scientific_name
human gut metagenome
segment_fecal
sleep_loss_1
segment_fecal_2early_mic
sl
segment_fecal_2late_mic
not applicable
segment_fecal_3_mic
sleep_loss_1
segment_fecal_met
sl
segment_fecal_numeric
1
sex
male
shotgun
no
sixteen_s
yes
stage1min_sp3
5.5
stage1pc_sp3
0.030898876
stage1pc_sp4
0.04
stage2pc_sp3
0.457865169
stage2pc_sp4
0.43
stage34min_sp3
30
stroop_congruent_medrtc
625.0833333333334
stroop_congruent_medrtc_b1
not applicable
stroop_congruent_medrtc_changefromb1
not applicable
stroop_incongruent_medrtc
724.9166666666666
stroop_incongruent_medrtc_b1
not applicable
stroop_incongruent_medrtc_changefromb1
not applicable
stroop_inhibitorycontrol
99.83333333333333
stroop_inhibitorycontrol_b1
not applicable
stroop_inhibitorycontrol_binary
low
stroop_inhibitorycontrol_changefromb1
not applicable
stroop_neutral_medrtc
675.5833333333334
stroop_neutral_medrtc_b1
not applicable
stroop_neutral_medrtc_changefromb1
not applicable
stroopincmrtc30
NA
stroopincmrtc35
LOW35
vas_alert
31.53
vas_alert_binary
low
visit
1
vs_ct
14.236830020570611
vs_ct_b1
nan
vs_ct_changefromb1
nan
vs_medrtc
656.7916666666666
vs_medrtc_b1
nan
vs_medrtc_changefromb1
nan
vs_medrtc_targetabsent
685.25
vs_medrtc_targetabsent_b1
nan
vs_medrtc_targetabsent_changefromb1
nan
vs_medrtc_targetpresent
580.75
vs_medrtc_targetpresent_b1
nan
vs_medrtc_targetpresent_changefromb1
nan
vs_missedtargetspc
30.68500853346482
vs_missedtargetspc_b1
nan
vs_missedtargetspc_changefromb1
nan
vs_slopetargetabsent
1.8779166666666667
vs_slopetargetabsent_b1
nan
vs_slopetargetabsent_binary
low
vs_slopetargetabsent_changefromb1
nan
vs_slopetargetpresent
4.4375
vs_slopetargetpresent_b1
nan
vs_slopetargetpresent_changefromb1
nan
wakeperiod
3
wasosp330
HIGH30
wasosp335
HIGH35
weight_kg
61.2
weight_unit
kg