soil metagenome
strawberry_pet_RA
ENA first public
2025-09-25
INSDC center name
UBT
INSDC status
public
Submitter Id
SFB-MP-003070
broad-scale environmental context
soil (ENVO_00001998)
collection date
2022-02
environmental medium
silty loam (ENVO_06105275)
geographic location (country and/or sea)
Germany
geographic location (latitude)
49.94782
geographic location (longitude)
11.57893
host common name
strawberry
library
rRNA
local environmental context
arable soil (ENVO_00005742)
pcr primers
515F (GTGYCAGCMGCCGCGGTAA) and 806r (GGACTACNVGGTWTCTAAT)
polymer_type
pet
project name
Metabarcoding of 16S rRNA genes and transcripts from root-associated prokaryotic communities in maize and strawberry under artificial microplastic contamination
sample collection method
manual soil collection
sample name
SFB-MP-003070
scientific_name
soil metagenome
seq_run
run4
sequencing method
Illumina iSeq 100-System
soil_compartment
root-attached
target gene
16S rRNA transcript
target subfragment
V4