Metagenome-Assembled Genome spire_mag_01535424 in SPIRE v01 classified as Veillonella_A sp900765165
Veillonella sp.
GUNC clade separation score
0.21
GUNC contamination score
0.07
GUNC reference representation score
0.6
GUNC version
GUNC v1.0.6
INSDC center name
EMBL Heidelberg
MAG coverage software
bwa mem
SPIRE genome cluster
https://spire.embl.de/spire/v1/cluster/specI_v4_07970
SPIRE genome id
https://spire.embl.de/spire/v1/genome/spire_mag_01535424
Submitter Id
spire_mag_01535424
assembly quality
Many fragments with little to no review of assembly other than reporting of standard assembly statistics
assembly software
megahit 1.2.9
binning parameters
tetramer and coverage
binning software
metaBAT2 v2.12.1
broad-scale environmental context
missing: third party data
collection date
missing: third party data
completeness score
94.72
completeness software
CheckM2 v0.1.3
contamination score
0.13
contig N50
70399
derived from assembly
ERZ27293822
environmental medium
missing: third party data
geographic location (country and/or sea)
missing: third party data
geographic location (latitude)
missing: third party data
geographic location (longitude)
missing: third party data
isolation_source
missing: third party data
linked to SPIRE sample
https://spire.embl.de/spire/v1/sample/82368
linked to SPIRE study
https://spire.embl.de/spire/v1/study/563
linked to analysis project
ERP175308
local environmental context
missing: third party data
metagenomic source
metagenomes
number of contigs
46
project name
SPIRE v1: a Searchable Planetary-scale mIcrobiome REsource
sample derived from
SAMN00993242
sample name
spire_mag_01535424
scientific_name
Veillonella sp.
taxonomic classification
d__Bacteria;p__Bacillota_C;c__Negativicutes;o__Veillonellales;f__Veillonellaceae;g__Veillonella_A;s__Veillonella_A sp900765165
taxonomic classification software
GTDBtk v2.3.2_r214
taxonomic identity marker
multi-marker approach