Metagenome-Assembled Genome spire_mag_00952858 in SPIRE v01 classified as Bacteroides_F pectinophilus
[Bacteroides] pectinophilus
ENA first public
2025-10-06
GUNC clade separation score
0.34
GUNC contamination score
0.08
GUNC reference representation score
0.93
GUNC version
GUNC v1.0.6
INSDC center name
EMBL Heidelberg
INSDC status
public
MAG coverage software
bwa mem
SPIRE genome cluster
https://spire.embl.de/spire/v1/cluster/specI_v4_03336
SPIRE genome id
https://spire.embl.de/spire/v1/genome/spire_mag_00952858
Submitter Id
spire_mag_00952858
assembly quality
Many fragments with little to no review of assembly other than reporting of standard assembly statistics
assembly software
megahit 1.2.9
binning parameters
tetramer and coverage
binning software
metaBAT2 v2.12.1
broad-scale environmental context
missing: third party data
collection date
missing: third party data
completeness score
73.95
completeness software
CheckM2 v0.1.3
contamination score
0.64
contig N50
6487
derived from assembly
ERZ27307862
environmental medium
missing: third party data
geographic location (country and/or sea)
missing: third party data
geographic location (latitude)
missing: third party data
geographic location (longitude)
missing: third party data
isolation_source
missing: third party data
linked to SPIRE sample
https://spire.embl.de/spire/v1/sample/102113
linked to SPIRE study
https://spire.embl.de/spire/v1/study/674
linked to analysis project
ERP176660
local environmental context
missing: third party data
metagenomic source
metagenomes
number of contigs
310
project name
SPIRE v1: a Searchable Planetary-scale mIcrobiome REsource
sample derived from
SAMEA5814820
sample name
spire_mag_00952858
scientific_name
[Bacteroides] pectinophilus
taxonomic classification
d__Bacteria;p__Bacillota_A;c__Clostridia;o__Lachnospirales;f__Lachnospiraceae;g__Bacteroides_F;s__Bacteroides_F pectinophilus
taxonomic classification software
GTDBtk v2.3.2_r214
taxonomic identity marker
multi-marker approach