Metagenome-Assembled Genome spire_mag_00932097 in SPIRE v01 classified as Faecalibacterium duncaniae
Faecalibacterium prausnitzii
GUNC clade separation score
0.0
GUNC contamination score
0.0
GUNC reference representation score
0.94
GUNC version
GUNC v1.0.6
INSDC center name
EMBL Heidelberg
MAG coverage software
bwa mem
SPIRE genome cluster
https://spire.embl.de/spire/v1/cluster/specI_v4_00406
SPIRE genome id
https://spire.embl.de/spire/v1/genome/spire_mag_00932097
Submitter Id
spire_mag_00932097
assembly quality
Many fragments with little to no review of assembly other than reporting of standard assembly statistics
assembly software
megahit 1.2.9
binning parameters
tetramer and coverage
binning software
metaBAT2 v2.12.1
broad-scale environmental context
missing: third party data
collection date
missing: third party data
completeness score
55.17
completeness software
CheckM2 v0.1.3
contamination score
0.83
contig N50
6675
derived from assembly
ERZ27235302
environmental medium
missing: third party data
geographic location (country and/or sea)
missing: third party data
geographic location (latitude)
missing: third party data
geographic location (longitude)
missing: third party data
isolation_source
missing: third party data
linked to SPIRE sample
https://spire.embl.de/spire/v1/sample/20951
linked to SPIRE study
https://spire.embl.de/spire/v1/study/174
linked to analysis project
ERP174154
local environmental context
missing: third party data
metagenomic source
metagenomes
number of contigs
224
project name
SPIRE v1: a Searchable Planetary-scale mIcrobiome REsource
sample derived from
SAMEA3708856
sample name
spire_mag_00932097
scientific_name
Faecalibacterium prausnitzii
taxonomic classification
d__Bacteria;p__Bacillota_A;c__Clostridia;o__Oscillospirales;f__Ruminococcaceae;g__Faecalibacterium;s__Faecalibacterium duncaniae
taxonomic classification software
GTDBtk v2.3.2_r214
taxonomic identity marker
multi-marker approach