NA
human gut metagenome
collection_date
2016
env_broad_scale
dense settlement biome
env_local_scale
animal-associated environment
env_medium
fecal material
geo_loc_name
USA
host
Homo sapiens
lat_lon
39.956 N 75.193 W
host_subject_id
Subj 301
SampleID_old
s.301.IBD.Therapy.Feces.Baseline
SampleType
Feces
Run
Tobacco 14
redcap_event_name
Baseline Visit
age_yrs
14.4904109589041
age_diag_yrs
14.4958904109589
sex
male
breastfed
No
ethnicity
Not Hispanic or Latino
race
Black/African American
Biologics
No
5.ASA
No
antibiotics
No
current_antibiotics
No
calprotectin_ave
1670.4
pucai_score
15
ibd_diagnosis
Crohn's Disease
Albumin_value(g/dl)
3.1
HCT_value(%)
35.7
HGB_value(g/dl)
11
study_group
IBD
study_group_detail
IBD_Ther
NewTherapy
Yes
Under7
No
Dominance
Bacteroidetes Bacteroides
DominanceProp
0.271034145793171
ShannonDivMetaPhlAn
2.92196964219862
RichnessMetaPhlAn
70
SimpsonIdxMetaPhlAn
0.909196722976954
IBD
True
humanPer
0.58
Time
0
dist2HltyCentroid.BC
0.624946924583487
dist2OwnCentroid.BC
0.57497275609364
MD.index
-0.714624320131227
MMI
63.8078253333333
spline.fit
124.137839153791
RMMI
-60.330013820458
age_month
173.88
PredictedComponent
Comp.2
study_day
Baseline
BioSampleModel
MIMS.me
BioSampleModel
MIGS/MIMS/MIMARKS.human-gut