Metagenome-assembled genome: SRR16817056_binner12_Refined_22
uncultured Sediminibacterium sp.
ENA first public
2025-08-14
INSDC center name
EMG
INSDC status
public
Submitter Id
SRR16817056_binner12_Refined_22
assembly quality
Many fragments with little to no review of assembly other than reporting of standard assembly statistics
assembly software
metaspades_v3.15.5
binning parameters
default
binning software
MGnify-genomes-generation-pipeline_v1.2.0
broad-scale environmental context
soil
broker name
EBI-EMG
collection date
2019-08/2019-09
completeness score
91.13
completeness software
CheckM2_v1.0.1
contamination score
2.89
environmental medium
tomato
geographic location (country and/or sea)
China
geographic location (latitude)
30.47000000
geographic location (longitude)
114.35000000
investigation type
metagenome-assembled genome
isolation_source
rhizosphere metagenome
local environmental context
rhizosphere
metagenomic source
rhizosphere metagenome
project name
Amplicon and metagenomic sequencing of tomato progeny and its parents
sample derived from
SAMN22899815
sample name
SRR16817056_binner12_Refined_22
scientific_name
uncultured Sediminibacterium sp.
sequencing method
Illumina NovaSeq 6000
taxonomic identity marker
multi-marker approach